r-cran-fastcluster →
1.1.25-3+b1 →
armhf → 2020-03-28 09:02:59
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-02
+==============================================================================+
| r-cran-fastcluster 1.1.25-3+b1 (armhf) Sat, 28 Mar 2020 08:18:46 +0000 |
+==============================================================================+
Package: r-cran-fastcluster
Version: 1.1.25-3+b1
Source Version: 1.1.25-3
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-5f61e9d6-6d6e-4c1e-b750-10ecef8055dd' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.6 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.8 MB]
Fetched 24.4 MB in 26s (955 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'r-cran-fastcluster' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-cran-fastcluster.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-cran-fastcluster.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 195 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main r-cran-fastcluster 1.1.25-3 (dsc) [2254 B]
Get:2 http://172.17.0.1/private bullseye-staging/main r-cran-fastcluster 1.1.25-3 (tar) [189 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main r-cran-fastcluster 1.1.25-3 (diff) [4216 B]
Fetched 195 kB in 0s (1623 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-cran-fastcluster-qK8aNb/r-cran-fastcluster-1.1.25' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-cran-fastcluster-qK8aNb' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-sQX1qE/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-sQX1qE/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-sQX1qE/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-sQX1qE/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-sQX1qE/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-sQX1qE/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-sQX1qE/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-sQX1qE/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (2832 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 14 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-sQX1qE/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (22.4 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12270 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 11~), dh-r, r-base-dev, dh-python, python3-all-dev, python3-numpy, python3-setuptools, python3-scipy
Filtered Build-Depends: debhelper (>= 11~), dh-r, r-base-dev, dh-python, python3-all-dev, python3-numpy, python3-setuptools, python3-scipy
dpkg-deb: building package 'sbuild-build-depends-r-cran-fastcluster-dummy' in '/<<BUILDDIR>>/resolver-sQX1qE/apt_archive/sbuild-build-depends-r-cran-fastcluster-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-r-cran-fastcluster-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-sQX1qE/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-sQX1qE/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-sQX1qE/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-sQX1qE/apt_archive ./ Sources [541 B]
Get:5 copy:/<<BUILDDIR>>/resolver-sQX1qE/apt_archive ./ Packages [624 B]
Fetched 2498 B in 1s (3306 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install r-cran-fastcluster build dependencies (apt-based resolver)
------------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates
dctrl-tools debhelper dh-autoreconf dh-python dh-r dh-strip-nondeterminism
dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base
gfortran gfortran-9 groff-base icu-devtools intltool-debian
libarchive-zip-perl libblas-dev libblas3 libbrotli1 libbsd0 libbz2-dev
libcairo2 libcroco3 libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
libexpat1-dev libfile-stripnondeterminism-perl libfile-which-perl
libfontconfig1 libfreetype6 libfribidi0 libgfortran-9-dev libgfortran5
libglib2.0-0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6
libicu-dev libicu63 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3
liblbfgsb0 liblzma-dev libmagic-mgc libmagic1 libmpdec2 libncurses-dev
libncurses5-dev libncurses6 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0
libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5
libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7
libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib libpython3.8
libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libreadline-dev
librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.1 libsub-override-perl
libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5 libtinfo5 libtk8.6
libtool libuchardet0 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0
libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1
libxss1 libxt6 m4 man-db mime-support openssl pkg-config po-debconf python3
python3-all python3-all-dev python3-decorator python3-dev python3-distutils
python3-lib2to3 python3-minimal python3-numpy python3-pkg-resources
python3-scipy python3-setuptools python3.7 python3.7-dev python3.7-minimal
python3.8 python3.8-dev python3.8-minimal r-base-core r-base-dev
sensible-utils ucf unzip x11-common xauth xdg-utils zip zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation debtags dh-make gettext-doc libasprintf-dev libgettextpo-dev
gfortran-doc gfortran-9-doc libcoarrays-dev groff liblapack-doc krb5-doc
krb5-user icu-doc liblzma-doc ncurses-doc readline-doc tcl8.6 tk8.6
libtool-doc gcj-jdk m4-doc apparmor less www-browser libmail-box-perl
python3-doc python3-tk python3-venv python-numpy-doc python3-pytest
python3-numpy-dbg python-scipy-doc python-setuptools-doc python3.7-venv
python3.7-doc binfmt-support python3.8-venv python3.8-doc elpa-ess
r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
Recommended packages:
devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs krb5-locales libgpm2 libpng-tools
publicsuffix libltdl-dev libmail-sendmail-perl python3-pil r-recommended
r-doc-html libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl
x11-utils x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates
dctrl-tools debhelper dh-autoreconf dh-python dh-r dh-strip-nondeterminism
dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base
gfortran gfortran-9 groff-base icu-devtools intltool-debian
libarchive-zip-perl libblas-dev libblas3 libbrotli1 libbsd0 libbz2-dev
libcairo2 libcroco3 libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
libexpat1-dev libfile-stripnondeterminism-perl libfile-which-perl
libfontconfig1 libfreetype6 libfribidi0 libgfortran-9-dev libgfortran5
libglib2.0-0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6
libicu-dev libicu63 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3
liblbfgsb0 liblzma-dev libmagic-mgc libmagic1 libmpdec2 libncurses-dev
libncurses5-dev libncurses6 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0
libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5
libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7
libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib libpython3.8
libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libreadline-dev
librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.1 libsub-override-perl
libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5 libtinfo5 libtk8.6
libtool libuchardet0 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0
libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1
libxss1 libxt6 m4 man-db mime-support openssl pkg-config po-debconf python3
python3-all python3-all-dev python3-decorator python3-dev python3-distutils
python3-lib2to3 python3-minimal python3-numpy python3-pkg-resources
python3-scipy python3-setuptools python3.7 python3.7-dev python3.7-minimal
python3.8 python3.8-dev python3.8-minimal r-base-core r-base-dev
sbuild-build-depends-r-cran-fastcluster-dummy sensible-utils ucf unzip
x11-common xauth xdg-utils zip zlib1g-dev
0 upgraded, 166 newly installed, 0 to remove and 14 not upgraded.
Need to get 200 MB of archives.
After this operation, 522 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-sQX1qE/apt_archive ./ sbuild-build-depends-r-cran-fastcluster-dummy 0.invalid.0 [912 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.2-1 [318 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-4 [783 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.1-1 [1262 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1d-2 [1268 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-minimal armhf 3.8.2-1 [744 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf python3.8-minimal armhf 3.8.2-1 [1628 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.8.2-2 [37.5 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.64 [37.8 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libmpdec2 armhf 2.4.2-3 [68.1 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-stdlib armhf 3.8.2-1 [1597 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf python3.8 armhf 3.8.2-1 [410 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.8.2-2 [20.7 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.8.2-2 [62.6 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-minimal armhf 3.7.7-1 [585 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf python3.7-minimal armhf 3.7.7-1 [1532 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-4 [262 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-4 [112 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-4 [66.9 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libswitch-perl all 2.17-2 [20.5 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1d-2 [806 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20190110 [157 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 12.10 [184 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.6.3-2 [14.7 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.64.1-1 [1157 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-3 [7987 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-4 [592 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.10 [1003 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.2-2 [78.4 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.2-2 [145 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 4.20200315 [91.6 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf unzip armhf 6.0-25 [152 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-2 [74.6 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-1 [108 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-2 [274 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.1-2 [330 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.13.1-5 [133 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.9-2 [298 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.9-2 [692 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.13.1-5 [108 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.13.1-5 [99.4 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-6 [261 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-7 [61.4 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-7 [112 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-7 [320 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-7 [135 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.40.0-1+b2 [74.2 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1 [53.9 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.68.0-1 [286 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10-20200312-2+rpi1 [230 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-1 [1597 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b1 [36.4 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.42.4-8 [168 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.13-11 [70.1 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.4-1+rpi1 [1308 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-8 [62.4 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-8 [52.1 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libtcl8.6 armhf 8.6.10+dfsg-1 [886 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+20 [252 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libtk8.6 armhf 8.6.10-1 [678 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1+b3 [156 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf r-base-core armhf 3.6.3-1 [24.3 MB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-9-dev armhf 9.3.0-3+rpi1 [278 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf gfortran-9 armhf 9.3.0-3+rpi1 [8107 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:9.2.1-3.1+rpi1 [1440 B]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf libblas-dev armhf 3.9.0-1 [113 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.9.0-1 [2981 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2-1 [79.5 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libncurses-dev armhf 6.2-1 [284 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libncurses5-dev armhf 6.2-1 [932 B]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libreadline-dev armhf 8.0-4 [116 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.34-7 [190 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-32-0 armhf 10.34-7 [181 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-posix2 armhf 10.34-7 [44.7 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-dev armhf 10.34-7 [614 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-12 [234 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-12 [227 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-12 [150 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-12 [564 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libpng-dev armhf 1.6.37-2 [276 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-2 [27.7 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 63.2-3 [163 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 63.2-3 [8860 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libxmuu1 armhf 2:1.1.2-2+b3 [23.4 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29-6 [59.8 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf r-base-dev all 3.6.3-1 [4488 B]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf dh-r all 20200314 [39.1 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.9-1 [119 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf liblbfgsb0 armhf 3.0+dfsg.3-7 [26.1 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8 armhf 3.8.2-1 [1367 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-dev armhf 3.8.2-1 [46.0 MB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf libpython3-dev armhf 3.8.2-2 [20.9 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-stdlib armhf 3.7.7-1 [1670 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7 armhf 3.7.7-1 [1253 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-dev armhf 3.7.7-1 [40.2 MB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf libpython3-all-dev armhf 3.8.2-2 [1072 B]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf python3.7 armhf 3.7.7-1 [354 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf python3-all armhf 3.8.2-2 [1060 B]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf python3.8-dev armhf 3.8.2-1 [533 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf python3-dev armhf 3.8.2-2 [1168 B]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf python3.7-dev armhf 3.7.7-1 [517 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf python3-all-dev armhf 3.8.2-2 [1076 B]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf python3-decorator all 4.4.2-1 [15.8 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 44.0.0-1 [155 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf python3-numpy armhf 1:1.17.4-5+b1 [4484 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf python3-scipy armhf 1.3.3-3+b1 [12.1 MB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf python3-setuptools all 44.0.0-1 [313 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package libbsd0:armhf.
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Unpacking libtinfo5:armhf (6.2-1) ...
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Preparing to unpack .../02-bsdmainutils_11.1.2_armhf.deb ...
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Unpacking groff-base (1.22.4-4) ...
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Unpacking man-db (2.9.1-1) ...
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Unpacking libssl1.1:armhf (1.1.1d-2) ...
Selecting previously unselected package libpython3.8-minimal:armhf.
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Selecting previously unselected package libexpat1:armhf.
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Unpacking libexpat1:armhf (2.2.9-1) ...
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Setting up libpython3.8-minimal:armhf (3.8.2-1) ...
Setting up libexpat1:armhf (2.2.9-1) ...
Setting up python3.8-minimal (3.8.2-1) ...
Selecting previously unselected package python3-minimal.
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Unpacking python3-minimal (3.8.2-2) ...
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Unpacking mime-support (3.64) ...
Selecting previously unselected package libmpdec2:armhf.
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Unpacking libmpdec2:armhf (2.4.2-3) ...
Selecting previously unselected package libpython3.8-stdlib:armhf.
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Unpacking libpython3.8-stdlib:armhf (3.8.2-1) ...
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Unpacking python3.8 (3.8.2-1) ...
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Setting up python3-minimal (3.8.2-2) ...
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Unpacking python3 (3.8.2-2) ...
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Moving old data out of the way
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update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
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Setting up autotools-dev (20180224.1) ...
Setting up libpcre2-32-0:armhf (10.34-7) ...
Setting up libblas3:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libexpat1-dev:armhf (2.2.9-1) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libswitch-perl (2.17-2) ...
Setting up libx11-data (2:1.6.9-2) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Setting up libncurses6:armhf (6.2-1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libfribidi0:armhf (1.0.8-2) ...
Setting up libpng16-16:armhf (1.6.37-2) ...
Setting up libpcre32-3:armhf (2:8.39-12) ...
Setting up libtcl8.6:armhf (8.6.10+dfsg-1) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up icu-devtools (63.2-3) ...
Setting up pkg-config (0.29-6) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up libpcre2-posix2:armhf (10.34-7) ...
Setting up libk5crypto3:armhf (1.17-7) ...
Setting up python3.7-minimal (3.7.7-1) ...
Setting up libgfortran5:armhf (10-20200312-2+rpi1) ...
Setting up liblzma-dev:armhf (5.2.4-1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libthai-data (0.1.28-3) ...
Setting up libssh2-1:armhf (1.8.0-2.1) ...
Setting up libkrb5-3:armhf (1.17-7) ...
Setting up libtiff5:armhf (4.1.0+git191117-2) ...
Setting up libmpdec2:armhf (2.4.2-3) ...
Setting up libpython3.8-stdlib:armhf (3.8.2-1) ...
Setting up python3.8 (3.8.2-1) ...
Setting up openssl (1.1.1d-2) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libtinfo5:armhf (6.2-1) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libicu-dev:armhf (63.2-3) ...
Setting up libxml2:armhf (2.9.10+dfsg-4) ...
Setting up xdg-utils (1.1.3-2) ...
Setting up libblas-dev:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up dctrl-tools (2.24-3) ...
Setting up libpython3-stdlib:armhf (3.8.2-2) ...
Setting up libbz2-dev:armhf (1.0.8-2) ...
Setting up libfile-stripnondeterminism-perl (1.6.3-2) ...
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libpython3.7-stdlib:armhf (3.7.7-1) ...
Setting up liblapack3:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libncurses-dev:armhf (6.2-1) ...
Setting up libxcb1:armhf (1.13.1-5) ...
Setting up libpcre2-dev:armhf (10.34-7) ...
Setting up libpython3.7:armhf (3.7.7-1) ...
Setting up libtool (2.4.6-14) ...
Setting up libxcb-render0:armhf (1.13.1-5) ...
Setting up libpcre3-dev:armhf (2:8.39-12) ...
Setting up libpython3.7-dev:armhf (3.7.7-1) ...
Setting up libpng-dev:armhf (1.6.37-2) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up libgfortran-9-dev:armhf (9.3.0-3+rpi1) ...
Setting up m4 (1.4.18-4) ...
Setting up python3 (3.8.2-2) ...
Setting up libxcb-shm0:armhf (1.13.1-5) ...
Setting up libreadline-dev:armhf (8.0-4) ...
Setting up libthai0:armhf (0.1.28-3) ...
Setting up ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
128 added, 0 removed; done.
Setting up python3-decorator (4.4.2-1) ...
Setting up libfreetype6:armhf (2.10.1-2) ...
Setting up libpython3.8:armhf (3.8.2-1) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up liblapack-dev:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-7) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up ucf (3.0038+nmu1) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.6.3-2) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-4) ...
Setting up libncurses5-dev:armhf (6.2-1) ...
Setting up libcurl4:armhf (7.68.0-1) ...
Setting up libx11-6:armhf (2:1.6.9-2) ...
Setting up libharfbuzz0b:armhf (2.6.4-1+rpi1) ...
Setting up python3-lib2to3 (3.8.2-2) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libxmuu1:armhf (2:1.1.2-2+b3) ...
Setting up liblbfgsb0:armhf (3.0+dfsg.3-7) ...
Setting up python3-pkg-resources (44.0.0-1) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up python3-distutils (3.8.2-2) ...
Setting up dh-python (4.20200315) ...
Setting up libpaper1:armhf (1.1.28) ...
Creating config file /etc/papersize with new version
Setting up python3.7 (3.7.7-1) ...
Setting up gettext (0.19.8.1-10) ...
Setting up python3-setuptools (44.0.0-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up gfortran-9 (9.3.0-3+rpi1) ...
Setting up fontconfig-config (2.13.1-2) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up python3-all (3.8.2-2) ...
Setting up libpaper-utils (1.1.28) ...
Setting up man-db (2.9.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up gfortran (4:9.2.1-3.1+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up python3.7-dev (3.7.7-1) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libpython3.8-dev:armhf (3.8.2-1) ...
Setting up libxt6:armhf (1:1.1.5-1+b3) ...
Setting up python3-numpy (1:1.17.4-5+b1) ...
Setting up python3.8-dev (3.8.2-1) ...
Setting up xauth (1:1.0.10-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libfontconfig1:armhf (2.13.1-2) ...
Setting up fontconfig (2.13.1-2) ...
Regenerating fonts cache... done.
Setting up libxft2:armhf (2.3.2-2) ...
Setting up python3-scipy (1.3.3-3+b1) ...
Setting up libpython3-dev:armhf (3.8.2-2) ...
Setting up po-debconf (1.0.21) ...
Setting up libtk8.6:armhf (8.6.10-1) ...
Setting up libpango-1.0-0:armhf (1.42.4-8) ...
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up libpython3-all-dev:armhf (3.8.2-2) ...
Setting up python3-dev (3.8.2-2) ...
Setting up libpangoft2-1.0-0:armhf (1.42.4-8) ...
Setting up libpangocairo-1.0-0:armhf (1.42.4-8) ...
Setting up python3-all-dev (3.8.2-2) ...
Setting up r-base-core (3.6.3-1) ...
Creating config file /etc/R/Renviron with new version
Setting up r-base-dev (3.6.3-1) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (12.10) ...
Setting up dh-r (20200314) ...
Setting up sbuild-build-depends-r-cran-fastcluster-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.30-2+rpi1) ...
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.34-5+rpi1 dpkg-dev_1.19.7 g++-9_9.3.0-3+rpi1 gcc-9_9.3.0-3+rpi1 libc6-dev_2.30-2+rpi1 libstdc++-9-dev_9.3.0-3+rpi1 libstdc++6_10-20200312-2+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_2.0.0+b1 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-5+rpi1 binutils-arm-linux-gnueabihf_2.34-5+rpi1 binutils-common_2.34-5+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.3.0-3+rpi1 dash_0.5.10.2-6 dctrl-tools_2.24-3 debconf_1.5.73 debhelper_12.10 debianutils_4.9.1 dh-autoreconf_19 dh-python_4.20200315 dh-r_20200314 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dirmngr_2.2.19-3 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.3.0-3+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-10-base_10-20200312-2+rpi1 gcc-6-base_6.5.0-1+rpi3 gcc-7-base_7.5.0-5 gcc-8-base_8.3.0-29+rpi1 gcc-9_9.3.0-3+rpi1 gcc-9-base_9.3.0-3+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran_4:9.2.1-3.1+rpi1 gfortran-9_9.3.0-3+rpi1 gnupg_2.2.19-3 gnupg-l10n_2.2.19-3 gnupg-utils_2.2.19-3 gpg_2.2.19-3 gpg-agent_2.2.19-3 gpg-wks-client_2.2.19-3 gpg-wks-server_2.2.19-3 gpgconf_2.2.19-3 gpgsm_2.2.19-3 gpgv_2.2.19-3 grep_3.4-1 groff-base_1.22.4-4 gzip_1.10-2 hostname_3.23 icu-devtools_63.2-3 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-3 libacl1_2.2.53-6 libapt-pkg6.0_2.0.0+b1 libarchive-zip-perl_1.68-1 libasan5_9.3.0-3+rpi1 libassuan0_2.5.3-7 libatomic1_10-20200312-2+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2+b1 libbinutils_2.34-5+rpi1 libblas-dev_3.9.0-1 libblas3_3.9.0-1 libblkid1_2.34-0.1 libbrotli1_1.0.7-6 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libbz2-dev_1.0.8-2 libc-bin_2.30-2+rpi1 libc-dev-bin_2.30-2+rpi1 libc6_2.30-2+rpi1 libc6-dev_2.30-2+rpi1 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2.1 libcap2_1:2.32-1 libcap2-bin_1:2.32-1 libcc1-0_10-20200312-2+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.15-1 libcrypt1_1:4.4.15-1 libctf-nobfd0_2.34-5+rpi1 libctf0_2.34-5+rpi1 libcurl4_7.68.0-1 libdatrie1_0.2.12-3+b1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.251 libdebhelper-perl_12.10 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libexpat1_2.2.9-1 libexpat1-dev_2.2.9-1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi7_3.3-3 libfile-stripnondeterminism-perl_1.6.3-2 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-2 libfreetype6_2.10.1-2 libfribidi0_1.0.8-2 libgcc-9-dev_9.3.0-3+rpi1 libgcc-s1_10-20200312-2+rpi1 libgcc1_1:10-20200312-2+rpi1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran-9-dev_9.3.0-3+rpi1 libgfortran5_10-20200312-2+rpi1 libglib2.0-0_2.64.1-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.12-2 libgomp1_10-20200312-2+rpi1 libgpg-error0_1.37-1 libgraphite2-3_1.3.13-11 libgssapi-krb5-2_1.17-7 libharfbuzz0b_2.6.4-1+rpi1 libhogweed5_3.5.1+really3.5.1-2 libice6_2:1.0.9-2 libicu-dev_63.2-3 libicu63_63.2-3 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libk5crypto3_1.17-7 libkeyutils1_1.6.1-2 libkrb5-3_1.17-7 libkrb5support0_1.17-7 libksba8_1.3.5-2 liblapack-dev_3.9.0-1 liblapack3_3.9.0-1 liblbfgsb0_3.0+dfsg.3-7 libldap-2.4-2_2.4.49+dfsg-2 libldap-common_2.4.49+dfsg-2 liblocale-gettext-perl_1.07-4 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-3 libmpfr6_4.0.2-1 libncurses-dev_6.2-1 libncurses5-dev_6.2-1 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1+b2 libnpth0_1.6-1 libp11-kit0_0.23.20-1 libpam-cap_1:2.32-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpango-1.0-0_1.42.4-8 libpangocairo-1.0-0_1.42.4-8 libpangoft2-1.0-0_1.42.4-8 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre16-3_2:8.39-12 libpcre2-16-0_10.34-7 libpcre2-32-0_10.34-7 libpcre2-8-0_10.34-7 libpcre2-dev_10.34-7 libpcre2-posix2_10.34-7 libpcre3_2:8.39-12 libpcre3-dev_2:8.39-12 libpcre32-3_2:8.39-12 libpcrecpp0v5_2:8.39-12 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libpixman-1-0_0.36.0-1 libpng-dev_1.6.37-2 libpng16-16_1.6.37-2 libpsl5_0.21.0-1 libpython3-all-dev_3.8.2-2 libpython3-dev_3.8.2-2 libpython3-stdlib_3.8.2-2 libpython3.7_3.7.7-1 libpython3.7-dev_3.7.7-1 libpython3.7-minimal_3.7.7-1 libpython3.7-stdlib_3.7.7-1 libpython3.8_3.8.2-1 libpython3.8-dev_3.8.2-1 libpython3.8-minimal_3.8.2-1 libpython3.8-stdlib_3.8.2-1 libreadline-dev_8.0-4 libreadline8_8.0-4 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.34-0.1 libsqlite3-0_3.31.1-4 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1d-2 libstdc++-9-dev_9.3.0-3+rpi1 libstdc++6_10-20200312-2+rpi1 libsub-override-perl_0.09-2 libswitch-perl_2.17-2 libsystemd0_244.3-1+rpi1 libtasn1-6_4.16.0-2 libtcl8.6_8.6.10+dfsg-1 libtext-charwidth-perl_0.04-10 libtext-iconv-perl_1.7-7 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0+git191117-2 libtinfo5_6.2-1 libtinfo6_6.2-1 libtk8.6_8.6.10-1 libtool_2.4.6-14 libubsan1_10-20200312-2+rpi1 libuchardet0_0.0.6-3 libudev1_244.3-1+rpi1 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libwebp6_0.6.1-2 libx11-6_2:1.6.9-2 libx11-data_2:1.6.9-2 libxau6_1:1.0.8-1+b2 libxcb-render0_1.13.1-5 libxcb-shm0_1.13.1-5 libxcb1_1.13.1-5 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-2 libxml2_2.9.10+dfsg-4 libxmuu1_2:1.1.2-2+b3 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.1.5-1+b3 libzstd1_1.4.4+dfsg-3+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mime-support_3.64 mount_2.34-0.1 ncurses-base_6.2-1 ncurses-bin_6.2-1 netbase_6.1 openssl_1.1.1d-2 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkg-config_0.29-6 po-debconf_1.0.21 python3_3.8.2-2 python3-all_3.8.2-2 python3-all-dev_3.8.2-2 python3-decorator_4.4.2-1 python3-dev_3.8.2-2 python3-distutils_3.8.2-2 python3-lib2to3_3.8.2-2 python3-minimal_3.8.2-2 python3-numpy_1:1.17.4-5+b1 python3-pkg-resources_44.0.0-1 python3-scipy_1.3.3-3+b1 python3-setuptools_44.0.0-1 python3.7_3.7.7-1 python3.7-dev_3.7.7-1 python3.7-minimal_3.7.7-1 python3.8_3.8.2-1 python3.8-dev_3.8.2-1 python3.8-minimal_3.8.2-1 r-base-core_3.6.3-1 r-base-dev_3.6.3-1 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-fastcluster-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2019c-3 ucf_3.0038+nmu1 unzip_6.0-25 util-linux_2.34-0.1 x11-common_1:7.7+20 xauth_1:1.0.10-1 xdg-utils_1.1.3-2 xz-utils_5.2.4-1 zip_3.0-11 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Fri Sep 27 18:17:57 2019 UTC
gpgv: using RSA key E8FC295C86B8D7C049F97BA7A35DAFFBAD29E8DE
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-cran-fastcluster_1.1.25-3.dsc
dpkg-source: info: extracting r-cran-fastcluster in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-cran-fastcluster_1.1.25.orig.tar.gz
dpkg-source: info: unpacking r-cran-fastcluster_1.1.25-3.debian.tar.xz
Check disc space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 1.1.25-3+b1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-5f61e9d6-6d6e-4c1e-b750-10ecef8055dd
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package r-cran-fastcluster
dpkg-buildpackage: info: source version 1.1.25-3+b1
dpkg-buildpackage: info: source distribution bullseye-staging
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --with python3 --buildsystem=pybuild --sourcedirectory=src/python
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean || true
I: pybuild base:217: python3.7 setup.py clean
Version: 1.1.25
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_fastcluster/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.7' does not exist -- can't clean it
I: pybuild base:217: python3.8 setup.py clean
Version: 1.1.25
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_fastcluster/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.8' does not exist -- can't clean it
# Parts of the following are taken from the CDBS file for F.
if test -d src; then \
find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
find src src -regex ".*\.so" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
rm -rf tmp-install
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_clean -O--buildsystem=pybuild -O--sourcedirectory=src/python
debian/rules build-arch
dh build-arch --with python3 --buildsystem=pybuild --sourcedirectory=src/python
dh_update_autotools_config -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_autoreconf -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_auto_configure -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
I: pybuild base:217: python3.7 setup.py config
Version: 1.1.25
running config
I: pybuild base:217: python3.8 setup.py config
Version: 1.1.25
running config
dh_auto_build -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
I: pybuild base:217: /usr/bin/python3.7 setup.py build
Version: 1.1.25
running build
running build_py
copying fastcluster.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_fastcluster/build
running build_ext
building '_fastcluster' extension
creating build
creating build/temp.linux-armhf-3.7
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c fastcluster_python.cpp -o build/temp.linux-armhf-3.7/fastcluster_python.o
In file included from fastcluster_python.cpp:38:
../fastcluster.cpp:54: warning: ignoring #pragma STDC FENV_ACCESS [-Wunknown-pragmas]
54 | #pragma STDC FENV_ACCESS on
|
In file included from fastcluster_python.cpp:38:
../fastcluster.cpp:53:118: note: #pragma message: Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.
53 | #pragma message("Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.")
| ^
arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/fastcluster_python.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_fastcluster/build/_fastcluster.cpython-37m-arm-linux-gnueabihf.so
I: pybuild base:217: /usr/bin/python3 setup.py build
Version: 1.1.25
running build
running build_py
copying fastcluster.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_fastcluster/build
running build_ext
building '_fastcluster' extension
creating build/temp.linux-armhf-3.8
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c fastcluster_python.cpp -o build/temp.linux-armhf-3.8/fastcluster_python.o
In file included from fastcluster_python.cpp:38:
../fastcluster.cpp:54: warning: ignoring #pragma STDC FENV_ACCESS [-Wunknown-pragmas]
54 | #pragma STDC FENV_ACCESS on
|
In file included from fastcluster_python.cpp:38:
../fastcluster.cpp:53:118: note: #pragma message: Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.
53 | #pragma message("Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.")
| ^
arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/fastcluster_python.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_fastcluster/build/_fastcluster.cpython-38-arm-linux-gnueabihf.so
dh_auto_test -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
I: pybuild base:217: python3.7 setup.py test
Version: 1.1.25
running test
WARNING: Testing via this command is deprecated and will be removed in a future version. Users looking for a generic test entry point independent of test runner are encouraged to use tox.
running egg_info
creating fastcluster.egg-info
writing fastcluster.egg-info/PKG-INFO
writing dependency_links to fastcluster.egg-info/dependency_links.txt
writing requirements to fastcluster.egg-info/requires.txt
writing top-level names to fastcluster.egg-info/top_level.txt
writing manifest file 'fastcluster.egg-info/SOURCES.txt'
reading manifest file 'fastcluster.egg-info/SOURCES.txt'
writing manifest file 'fastcluster.egg-info/SOURCES.txt'
running build_ext
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_fastcluster/build/_fastcluster.cpython-37m-arm-linux-gnueabihf.so ->
test (tests.fastcluster_test) ... ok
test_nan (tests.fastcluster_test) ... ok
test_vector (tests.fastcluster_test) ...
Test program for the 'fastcluster' package.
Copyright:
* Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
* All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>
Dimension: 17
Number of points: 26
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 17
Number of points: 72
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 12
Number of points: 54
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 12
Number of points: 82
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 17
Number of points: 29
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 16
Number of points: 40
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 7
Number of points: 99
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 10
Number of points: 69
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 13
Number of points: 79
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 3
Number of points: 89
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Test program for the 'fastcluster' package.
Copyright:
* Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
* All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>
Test program for the 'fastcluster' package.
Copyright:
* Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
* All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>
Seed: 282924385
Dimension: 7
Number of points: 54
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 1.9258247340873593...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 12
Number of points: 39
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 2.7899138743462353...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 4
Number of points: 41
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 5.354376176188985...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 7
Number of points: 98
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 3.0541618210630253...Method: single...OK.
Metric: cosine...Method: single.../usr/lib/python3/dist-packages/scipy/spatial/distance.py:153: DeprecationWarning: 1 metric parameters have been passed as positional.This will raise an error in a future version.Please pass arguments as keywords(i.e., ARGNAME=ARGVALUE)
% num_args, DeprecationWarning)
ok
----------------------------------------------------------------------
Ran 3 tests in 621.007s
OK
OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 4
Number of points: 9
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 2.236233348140533...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 8
Number of points: 108
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 5.187561399244638...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 11
Number of points: 115
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 3.478166751722425...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 3
Number of points: 78
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 8.427399791908744...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 11
Number of points: 173
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 4.4024128059413705...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 12
Number of points: 184
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 9.832691956237975...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Seed: 282924385
Seed: 402471078
Seed: 551203752
I: pybuild base:217: python3.8 setup.py test
Version: 1.1.25
running test
WARNING: Testing via this command is deprecated and will be removed in a future version. Users looking for a generic test entry point independent of test runner are encouraged to use tox.
running egg_info
writing fastcluster.egg-info/PKG-INFO
writing dependency_links to fastcluster.egg-info/dependency_links.txt
writing requirements to fastcluster.egg-info/requires.txt
writing top-level names to fastcluster.egg-info/top_level.txt
reading manifest file 'fastcluster.egg-info/SOURCES.txt'
writing manifest file 'fastcluster.egg-info/SOURCES.txt'
running build_ext
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_fastcluster/build/_fastcluster.cpython-38-arm-linux-gnueabihf.so ->
test (tests.fastcluster_test) ... ok
test_nan (tests.fastcluster_test) ... ok
test_vector (tests.fastcluster_test) ...
Test program for the 'fastcluster' package.
Copyright:
* Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
* All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>
Dimension: 16
Number of points: 49
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 2
Number of points: 27
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 2
Number of points: 34
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 15
Number of points: 87
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 11
Number of points: 31
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 12
Number of points: 54
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 2
Number of points: 18
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 19
Number of points: 72
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 14
Number of points: 34
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 15
Number of points: 13
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Test program for the 'fastcluster' package.
Copyright:
* Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
* All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>
Test program for the 'fastcluster' package.
Copyright:
* Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
* All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>
Seed: 923379565
Dimension: 5
Number of points: 158
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 6.6387702523210494...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 7
Number of points: 71
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 9.76173772983822...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 11
Number of points: 138
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 6.421358629413228...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 7
Number of points: 39
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 8.34529772188623...Method: single...OK.
Metric: cosine...Method: single.../usr/lib/python3/dist-packages/scipy/spatial/distance.py:150: DeprecationWarning: 1 metric parameters have been passed as positional.This will raise an error in a future version.Please pass arguments as keywords(i.e., ARGNAME=ARGVALUE)
warnings.warn('%d metric parameters have been passed as positional.'
ok
----------------------------------------------------------------------
Ran 3 tests in 661.439s
OK
OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 10
Number of points: 35
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 3.455909197467017...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 12
Number of points: 166
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 4.1518915421264255...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 11
Number of points: 26
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 8.08943649355713...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 12
Number of points: 94
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 9.15053019622517...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 11
Number of points: 185
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 2.3377351671001616...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 2
Number of points: 86
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 7.393252408171305...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Skip this test: NaN dissimilarity value.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Seed: 923379565
Seed: 893811588
Seed: 265234139
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=pybuild --sourcedirectory=src/python
dh_testroot -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_prep -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install -O--buildsystem=R --sourcedirectory=/<<PKGBUILDDIR>>
I: R packages needed for DEP8: runit
I: R Package: fastcluster Version: 1.1.25
I: Building using R version 3.6.3-1
I: R API version: r-api-3.5
I: Using built-time from d/changelog: Fri, 27 Sep 2019 17:49:21 +0000
mkdir -p /<<PKGBUILDDIR>>/debian/tmp/usr/lib/R/site-library
R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/tmp/usr/lib/R/site-library --clean . "--built-timestamp='Fri, 27 Sep 2019 17:49:21 +0000'"
* installing *source* package ‘fastcluster’ ...
** package ‘fastcluster’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-CtMU1R/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fastcluster_R.cpp -o fastcluster_R.o
In file included from fastcluster_R.cpp:24:
fastcluster.cpp:53:118: note: #pragma message: Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.
53 | #pragma message("Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.")
| ^
g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-z,relro -o fastcluster.so fastcluster_R.o -L/usr/lib/R/lib -lR
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/tmp/usr/lib/R/site-library/00LOCK-r-cran-fastcluster-1.1.25/00new/fastcluster/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fastcluster)
rm -f /<<PKGBUILDDIR>>/debian/tmp/usr/lib/R/site-library/fastcluster/LICENSE
W: Ignoring specified R dependency: R (>= 3.0.0)
I: Using r-cran-runit for Recommends:runit
mv debian/tmp tmp-install
dh_auto_install
I: pybuild base:217: /usr/bin/python3.7 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-fastcluster
Version: 1.1.25
running install
running build
running build_py
running build_ext
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-fastcluster
creating /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr
creating /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib
creating /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.7
creating /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.7/dist-packages
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_fastcluster/build/fastcluster.py -> /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.7/dist-packages
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_fastcluster/build/_fastcluster.cpython-37m-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.7/dist-packages
byte-compiling /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.7/dist-packages/fastcluster.py to fastcluster.cpython-37.pyc
running install_egg_info
running egg_info
writing fastcluster.egg-info/PKG-INFO
writing dependency_links to fastcluster.egg-info/dependency_links.txt
writing requirements to fastcluster.egg-info/requires.txt
writing top-level names to fastcluster.egg-info/top_level.txt
reading manifest file 'fastcluster.egg-info/SOURCES.txt'
writing manifest file 'fastcluster.egg-info/SOURCES.txt'
Copying fastcluster.egg-info to /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.7/dist-packages/fastcluster-1.1.25.egg-info
Skipping SOURCES.txt
running install_scripts
I: pybuild base:217: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-fastcluster
Version: 1.1.25
running install
running build
running build_py
running build_ext
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.8
creating /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.8/dist-packages
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_fastcluster/build/fastcluster.py -> /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.8/dist-packages
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_fastcluster/build/_fastcluster.cpython-38-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.8/dist-packages
byte-compiling /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.8/dist-packages/fastcluster.py to fastcluster.cpython-38.pyc
running install_egg_info
running egg_info
writing fastcluster.egg-info/PKG-INFO
writing dependency_links to fastcluster.egg-info/dependency_links.txt
writing requirements to fastcluster.egg-info/requires.txt
writing top-level names to fastcluster.egg-info/top_level.txt
reading manifest file 'fastcluster.egg-info/SOURCES.txt'
writing manifest file 'fastcluster.egg-info/SOURCES.txt'
Copying fastcluster.egg-info to /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.8/dist-packages/fastcluster-1.1.25.egg-info
Skipping SOURCES.txt
running install_scripts
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_numpy3
dh_install
find debian -name LICENSE -delete
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installchangelogs -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_python3 -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installinit -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_perl -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_link -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_strip_nondeterminism -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_compress -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_fixperms -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_missing -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_strip -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_makeshlibs -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_shlibdeps -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-fastcluster/usr/lib/python3/dist-packages/_fastcluster.cpython-37m-arm-linux-gnueabihf.so debian/python3-fastcluster/usr/lib/python3/dist-packages/_fastcluster.cpython-38-arm-linux-gnueabihf.so were not linked against libpthread.so.0 (they use none of the library's symbols)
dh_installdeb -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_gencontrol -a -O--buildsystem=pybuild -O--sourcedirectory=src/python
dpkg-gencontrol: warning: package r-cran-fastcluster: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package python3-fastcluster: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-fastcluster: substitution variable ${python3:Versions} unused, but is defined
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Build finished at 2020-03-28T09:02:51Z
Finished
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I: Built successfully
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| Changes |
+------------------------------------------------------------------------------+
r-cran-fastcluster_1.1.25-3+b1_armhf.changes:
---------------------------------------------
Format: 1.8
Date: Fri, 27 Sep 2019 17:49:21 +0000
Source: r-cran-fastcluster (1.1.25-3)
Binary: python3-fastcluster python3-fastcluster-dbgsym r-cran-fastcluster r-cran-fastcluster-dbgsym
Binary-Only: yes
Architecture: armhf
Version: 1.1.25-3+b1
Distribution: bullseye-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
python3-fastcluster - Fast hierarchical clustering routines for Python 3
r-cran-fastcluster - Fast hierarchical clustering routines for GNU R
Changes:
r-cran-fastcluster (1.1.25-3+b1) bullseye-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
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python3-fastcluster-dbgsym_1.1.25-3+b1_armhf.deb
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Package: python3-fastcluster
Source: r-cran-fastcluster (1.1.25-3)
Version: 1.1.25-3+b1
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 147
Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.5), libstdc++6 (>= 5.2), python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9, python3 (<< 3.9), python3 (>= 3.7~), python3:any
Recommends: python3-scipy
Section: python
Priority: optional
Homepage: https://cran.r-project.org/package=fastcluster
Description: Fast hierarchical clustering routines for Python 3
This library provides Python functions for hierarchical
clustering. It generates hierarchical clusters from distance matrices
or from vector data.
.
Part of this module is intended to replace the functions
.
linkage, single, complete, average, weighted, centroid, median, ward
.
in the module scipy.cluster.hierarchy with the same functionality but
much faster algorithms. Moreover, the function 'linkage_vector'
provides memory-efficient clustering for vector data.
.
The interface is very similar to MATLAB's Statistics Toolbox API to
make code easier to port from MATLAB to Python/Numpy. The core
implementation of this library is in C++ for efficiency.
.
This package provides the package's Python 3 interface.
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Section: debug
Priority: optional
Description: debug symbols for r-cran-fastcluster
Build-Ids: b4cb58d52fb0457219863791d7a7d3939422877e
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r-cran-fastcluster_1.1.25-3+b1_armhf.deb
----------------------------------------
new Debian package, version 2.0.
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Package: r-cran-fastcluster
Source: r-cran-fastcluster (1.1.25-3)
Version: 1.1.25-3+b1
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Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 290
Depends: r-base-core (>= 3.6.3-1), r-api-3.5, libc6 (>= 2.29), libgcc-s1 (>= 3.5), libstdc++6 (>= 5.2)
Recommends: r-cran-runit
Section: gnu-r
Priority: optional
Homepage: https://cran.r-project.org/package=fastcluster
Description: Fast hierarchical clustering routines for GNU R
Fastcluster implements fast hierarchical, agglomerative clustering
routines. Part of the functionality is designed as drop-in replacement
for existing routines: “linkage” in the SciPy package
“scipy.cluster.hierarchy”, “hclust” in R's “stats” package, and the
“flashClust” package. It provides the same functionality with the
benefit of a much faster implementation. Moreover, there are
memory-saving routines for clustering of vector data, which go beyond
what the existing packages provide. For information on how to install
the Python files, see the file INSTALL in the source distribution.
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+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 5908
Build-Time: 1466
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 1130
Job: r-cran-fastcluster_1.1.25-3
Machine Architecture: armhf
Package: r-cran-fastcluster
Package-Time: 2645
Source-Version: 1.1.25-3
Space: 5908
Status: successful
Version: 1.1.25-3+b1
--------------------------------------------------------------------------------
Finished at 2020-03-28T09:02:51Z
Build needed 00:44:05, 5908k disc space