r-cran-fastcluster →
1.1.24-1+b1 →
armhf → 2017-11-09 06:53:04
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd
+==============================================================================+
| r-cran-fastcluster 1.1.24-1+b1 (armhf) Thu, 09 Nov 2017 05:53:39 +0000 |
+==============================================================================+
Package: r-cran-fastcluster
Version: 1.1.24-1+b1
Source Version: 1.1.24-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-8c20d2e7-96f6-4514-b13c-5cec861c88a1' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.3 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.2 MB]
Fetched 22.5 MB in 30s (748 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'r-cran-fastcluster' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/r-cran-fastcluster.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/r-cran-fastcluster.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 195 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main r-cran-fastcluster 1.1.24-1 (dsc) [2421 B]
Get:2 http://172.17.0.1/private buster-staging/main r-cran-fastcluster 1.1.24-1 (tar) [189 kB]
Get:3 http://172.17.0.1/private buster-staging/main r-cran-fastcluster 1.1.24-1 (diff) [4024 B]
Fetched 195 kB in 0s (494 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-cran-fastcluster-1uf3jT/r-cran-fastcluster-1.1.24' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-cran-fastcluster-1uf3jT' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-6GAX6g/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-6GAX6g/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-6GAX6g/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-6GAX6g/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-6GAX6g/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-6GAX6g/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-6GAX6g/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-6GAX6g/apt_archive ./ Packages [432 B]
Fetched 2108 B in 0s (3185 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates e2fsprogs-l10n libsasl2-modules libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 5 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-6GAX6g/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15130 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 10), dh-python, dh-r, r-base-dev, python-dev, python-numpy, python-setuptools, python-scipy, python3-dev, python3-numpy, python3-setuptools, python3-scipy
Filtered Build-Depends: debhelper (>= 10), dh-python, dh-r, r-base-dev, python-dev, python-numpy, python-setuptools, python-scipy, python3-dev, python3-numpy, python3-setuptools, python3-scipy
dpkg-deb: building package 'sbuild-build-depends-r-cran-fastcluster-dummy' in '/<<BUILDDIR>>/resolver-6GAX6g/apt_archive/sbuild-build-depends-r-cran-fastcluster-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-r-cran-fastcluster-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-6GAX6g/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-6GAX6g/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-6GAX6g/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-6GAX6g/apt_archive ./ Sources [549 B]
Get:5 copy:/<<BUILDDIR>>/resolver-6GAX6g/apt_archive ./ Packages [629 B]
Fetched 2511 B in 0s (3757 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install r-cran-fastcluster build dependencies (apt-based resolver)
------------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
e2fsprogs-l10n libsasl2-modules
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cdbs dctrl-tools
debhelper dh-autoreconf dh-python dh-r dh-strip-nondeterminism file
fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
gfortran-7 groff-base icu-devtools intltool-debian libarchive-zip-perl
libblas-dev libblas3 libbsd0 libbz2-dev libcairo2 libcroco3 libcurl3
libdatrie1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl
libfontconfig1 libfreetype6 libgfortran-7-dev libgfortran4 libglib2.0-0
libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu-dev libicu57
libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblzma-dev
libmagic-mgc libmagic1 libmpdec2 libncurses5-dev libnghttp2-14
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
libpaper1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1
libpixman-1-0 libpng-dev libpsl5 libpython-dev libpython-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev
libpython3-stdlib libpython3.5-minimal libpython3.5-stdlib libpython3.6
libpython3.6-dev libpython3.6-minimal libpython3.6-stdlib libreadline-dev
librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.0.2 libtcl8.6 libthai-data
libthai0 libtiff5 libtimedate-perl libtinfo-dev libtk8.6 libtool libx11-6
libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 m4 man-db mime-support
pkg-config po-debconf python python-decorator python-dev python-minimal
python-numpy python-pkg-resources python-scipy python-setuptools python2.7
python2.7-dev python2.7-minimal python3 python3-decorator python3-dev
python3-minimal python3-numpy python3-pkg-resources python3-scipy
python3-setuptools python3.5 python3.5-minimal python3.6 python3.6-dev
python3.6-minimal r-base-core r-base-dev ucf unzip x11-common xauth
xdg-utils zip zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation devscripts debtags dh-make dwz gettext-doc libasprintf-dev
libgettextpo-dev gfortran-doc gfortran-7-doc libgfortran4-dbg
libcoarrays-dev groff liblapack-doc krb5-doc krb5-user icu-doc liblzma-doc
ncurses-doc readline-doc tcl8.6 tk8.6 libtool-doc gcj-jdk m4-doc less
www-browser libmail-box-perl python-doc python-tk python-nose
python-numpy-dbg python-numpy-doc python-scipy-doc python-setuptools-doc
python2.7-doc binfmt-support python3-doc python3-tk python3-venv
python3-nose python3-numpy-dbg python3.5-venv python3.5-doc python3.6-venv
python3.6-doc ess r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base
texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
texlive-latex-extra texinfo
Recommended packages:
curl | wget | lynx-cur bzip2-doc libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs krb5-locales libpng-tools publicsuffix
libltdl-dev libmail-sendmail-perl python-imaging r-recommended r-doc-html
libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cdbs dctrl-tools
debhelper dh-autoreconf dh-python dh-r dh-strip-nondeterminism file
fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
gfortran-7 groff-base icu-devtools intltool-debian libarchive-zip-perl
libblas-dev libblas3 libbsd0 libbz2-dev libcairo2 libcroco3 libcurl3
libdatrie1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl
libfontconfig1 libfreetype6 libgfortran-7-dev libgfortran4 libglib2.0-0
libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu-dev libicu57
libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblzma-dev
libmagic-mgc libmagic1 libmpdec2 libncurses5-dev libnghttp2-14
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
libpaper1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1
libpixman-1-0 libpng-dev libpsl5 libpython-dev libpython-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev
libpython3-stdlib libpython3.5-minimal libpython3.5-stdlib libpython3.6
libpython3.6-dev libpython3.6-minimal libpython3.6-stdlib libreadline-dev
librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.0.2 libtcl8.6 libthai-data
libthai0 libtiff5 libtimedate-perl libtinfo-dev libtk8.6 libtool libx11-6
libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 m4 man-db mime-support
pkg-config po-debconf python python-decorator python-dev python-minimal
python-numpy python-pkg-resources python-scipy python-setuptools python2.7
python2.7-dev python2.7-minimal python3 python3-decorator python3-dev
python3-minimal python3-numpy python3-pkg-resources python3-scipy
python3-setuptools python3.5 python3.5-minimal python3.6 python3.6-dev
python3.6-minimal r-base-core r-base-dev
sbuild-build-depends-r-cran-fastcluster-dummy ucf unzip x11-common xauth
xdg-utils zip zlib1g-dev
0 upgraded, 156 newly installed, 0 to remove and 5 not upgraded.
Need to get 148 MB of archives.
After this operation, 458 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-6GAX6g/apt_archive ./ sbuild-build-depends-r-cran-fastcluster-dummy 0.invalid.0 [912 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.8.6-2 [95.8 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 9.0.14 [178 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.4.2-1 [24.2 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.7.6.1-2 [1014 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libexpat1 armhf 2.2.3-1 [67.1 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.8.1-0.1 [401 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0036 [70.2 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.12.3-0.2 [304 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.12.3-0.2 [349 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.12.3-0.2 [435 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.12-1 [129 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.4-3 [290 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.4-3 [683 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf x11-common all 1:7.7+19 [251 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libxss1 armhf 1:1.2.2-1 [16.8 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.14-2 [393 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.14-2 [1091 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.14-1 [40.7 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.60 [36.7 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.14-2 [1854 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.14-2 [292 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.14-1 [20.1 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.14-1 [155 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libpython3.6-minimal armhf 3.6.3-1 [564 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf python3.6-minimal armhf 3.6.3-1 [1232 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf python3-minimal armhf 3.6.3-2 [35.7 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-1 [67.5 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libpython3.6-stdlib armhf 3.6.3-1 [2055 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf python3.6 armhf 3.6.3-1 [218 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.6.3-2 [19.1 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf dh-python all 2.20170125 [86.8 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.6.3-2 [22.1 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libpython3.5-minimal armhf 3.5.4-4 [572 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf python3.5-minimal armhf 3.5.4-4 [1431 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libssl1.0.2 armhf 1.0.2m-3 [887 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.32-1 [225 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.32-1 [105 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.32-1 [63.7 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-4 [117 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libkeyutils1 armhf 1.5.9-9 [11.9 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libicu57 armhf 57.1-8 [7411 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-5 [609 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.11-1 [29.3 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20161112.1+nmu1 [74.2 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3 [736 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-4 [434 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf cdbs all 0.4.156 [83.1 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf dctrl-tools armhf 2.24-2 [94.4 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 14 [15.9 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.59-1 [95.5 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.040-1 [18.4 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.040-1 [11.8 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.54.1-1 [2653 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-1 [132 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-4 [1218 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf debhelper all 10.10.5 [978 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf unzip armhf 6.0-21 [149 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.24+nmu5 [20.8 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.24+nmu5 [17.2 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.2-1 [72.7 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.2.0-12 [191 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.7.1-4 [103 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libpixman-1-0 armhf 0.34.0-1 [451 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.12-1 [104 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.12-1 [95.9 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.15.8-2 [557 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libkrb5support0 armhf 1.15.2-2 [58.6 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libk5crypto3 armhf 1.15.2-2 [116 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libkrb5-3 armhf 1.15.2-2 [263 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libgssapi-krb5-2 armhf 1.15.2-2 [133 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.27.0-1 [71.0 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.18.0-4 [42.4 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-1 [54.2 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-1 [126 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf libcurl3 armhf 7.56.1-1 [276 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2 [110 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.7.1-4 [1508 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.27-1 [168 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.10-5 [33.0 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.27-1 [50.0 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.40.12-1 [179 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.10-6 [71.5 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 1.6.2-1 [683 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.40.12-1 [72.0 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.40.12-1 [61.2 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf libsm6 armhf 2:1.2.2-1+b3 [31.2 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf libtcl8.6 armhf 8.6.7+dfsg-1 [869 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.8-6 [219 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf libxft2 armhf 2.3.2-1+b2 [49.3 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf libtk8.6 armhf 8.6.7-1 [660 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libxt6 armhf 1:1.1.5-1 [155 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf r-base-core armhf 3.4.2-2 [22.9 MB]
Get:109 http://172.17.0.1/private buster-staging/main armhf libgfortran-7-dev armhf 7.2.0-12 [231 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf gfortran-7 armhf 7.2.0-12 [5443 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf gfortran armhf 4:7.2.0-1d1 [1352 B]
Get:112 http://172.17.0.1/private buster-staging/main armhf libblas-dev armhf 3.7.1-4 [112 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf liblapack-dev armhf 3.7.1-4 [1564 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf libtinfo-dev armhf 6.0+20170902-1 [66.6 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf libncurses5-dev armhf 6.0+20170902-1 [151 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf libreadline-dev armhf 7.0-3 [109 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2 [178 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:119 http://172.17.0.1/private buster-staging/main armhf libpcre16-3 armhf 2:8.39-4 [235 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf libpcre32-3 armhf 2:8.39-4 [227 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf libpcrecpp0v5 armhf 2:8.39-4 [149 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf libpcre3-dev armhf 2:8.39-4 [565 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.8.dfsg-5 [198 kB]
Get:124 http://172.17.0.1/private buster-staging/main armhf libpng-dev armhf 1.6.34-1 [274 kB]
Get:125 http://172.17.0.1/private buster-staging/main armhf libbz2-dev armhf 1.0.6-8.1 [26.9 kB]
Get:126 http://172.17.0.1/private buster-staging/main armhf liblzma-dev armhf 5.2.2-1.3 [284 kB]
Get:127 http://172.17.0.1/private buster-staging/main armhf icu-devtools armhf 57.1-8 [156 kB]
Get:128 http://172.17.0.1/private buster-staging/main armhf libicu-dev armhf 57.1-8 [15.8 MB]
Get:129 http://172.17.0.1/private buster-staging/main armhf libxmuu1 armhf 2:1.1.2-2 [23.0 kB]
Get:130 http://172.17.0.1/private buster-staging/main armhf xauth armhf 1:1.0.9-1 [35.6 kB]
Get:131 http://172.17.0.1/private buster-staging/main armhf pkg-config armhf 0.29-4 [59.2 kB]
Get:132 http://172.17.0.1/private buster-staging/main armhf r-base-dev all 3.4.2-2 [4488 B]
Get:133 http://172.17.0.1/private buster-staging/main armhf dh-r all 20161219 [8794 B]
Get:134 http://172.17.0.1/private buster-staging/main armhf libexpat1-dev armhf 2.2.3-1 [120 kB]
Get:135 http://172.17.0.1/private buster-staging/main armhf libpython2.7 armhf 2.7.14-2 [904 kB]
Get:136 http://172.17.0.1/private buster-staging/main armhf libpython2.7-dev armhf 2.7.14-2 [27.6 MB]
Get:137 http://172.17.0.1/private buster-staging/main armhf libpython-dev armhf 2.7.14-1 [20.1 kB]
Get:138 http://172.17.0.1/private buster-staging/main armhf libpython3.6 armhf 3.6.3-1 [1228 kB]
Get:139 http://172.17.0.1/private buster-staging/main armhf libpython3.6-dev armhf 3.6.3-1 [2252 kB]
Get:140 http://172.17.0.1/private buster-staging/main armhf libpython3-dev armhf 3.6.3-2 [19.2 kB]
Get:141 http://172.17.0.1/private buster-staging/main armhf libpython3.5-stdlib armhf 3.5.4-4 [2095 kB]
Get:142 http://172.17.0.1/private buster-staging/main armhf python-decorator all 4.1.2-1 [13.7 kB]
Get:143 http://172.17.0.1/private buster-staging/main armhf python2.7-dev armhf 2.7.14-2 [295 kB]
Get:144 http://172.17.0.1/private buster-staging/main armhf python-dev armhf 2.7.14-1 [1130 B]
Get:145 http://172.17.0.1/private buster-staging/main armhf python-numpy armhf 1:1.13.1-1 [1727 kB]
Get:146 http://172.17.0.1/private buster-staging/main armhf python-pkg-resources all 36.6.0-1 [170 kB]
Get:147 http://172.17.0.1/private buster-staging/main armhf python-setuptools all 36.6.0-1 [305 kB]
Get:148 http://172.17.0.1/private buster-staging/main armhf python3-decorator all 4.1.2-1 [13.7 kB]
Get:149 http://172.17.0.1/private buster-staging/main armhf python3.6-dev armhf 3.6.3-1 [510 kB]
Get:150 http://172.17.0.1/private buster-staging/main armhf python3-dev armhf 3.6.3-2 [1236 B]
Get:151 http://172.17.0.1/private buster-staging/main armhf python3.5 armhf 3.5.4-4 [241 kB]
Get:152 http://172.17.0.1/private buster-staging/main armhf python3-numpy armhf 1:1.13.1-1 [1885 kB]
Get:153 http://172.17.0.1/private buster-staging/main armhf python3-pkg-resources all 36.6.0-1 [141 kB]
Get:154 http://172.17.0.1/private buster-staging/main armhf python3-setuptools all 36.6.0-1 [223 kB]
Get:155 http://172.17.0.1/private buster-staging/main armhf python-scipy armhf 0.19.1-1+b1 [8546 kB]
Get:156 http://172.17.0.1/private buster-staging/main armhf python3-scipy armhf 0.19.1-1+b1 [8489 kB]
debconf: delaying package configuration, since apt-utils is not installed
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
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update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
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Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
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Creating config file /etc/papersize with new version
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update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up liblapack3:armhf (3.7.1-4) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libpython3.5-stdlib:armhf (3.5.4-4) ...
Setting up python2.7 (2.7.14-2) ...
Setting up libharfbuzz0b:armhf (1.6.2-1) ...
Setting up autoconf (2.69-11) ...
Setting up libthai0:armhf (0.1.27-1) ...
Setting up libicu-dev (57.1-8) ...
Setting up file (1:5.32-1) ...
Setting up libkrb5support0:armhf (1.15.2-2) ...
Setting up python3.5-minimal (3.5.4-4) ...
Setting up libpython-stdlib:armhf (2.7.14-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up libpython2.7:armhf (2.7.14-2) ...
Setting up automake (1:1.15.1-3) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up man-db (2.7.6.1-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libpython2.7-dev:armhf (2.7.14-2) ...
Setting up libpng-dev:armhf (1.6.34-1) ...
Setting up python2.7-dev (2.7.14-2) ...
Setting up libxcb1:armhf (1.12-1) ...
Setting up python (2.7.14-1) ...
Setting up libpython3.6:armhf (3.6.3-1) ...
Setting up liblapack-dev:armhf (3.7.1-4) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libtool (2.4.6-2) ...
Setting up python3.5 (3.5.4-4) ...
Setting up libpython3-stdlib:armhf (3.6.3-2) ...
Setting up libpython-dev:armhf (2.7.14-1) ...
Setting up libfontconfig1:armhf (2.12.3-0.2) ...
Setting up libsm6:armhf (2:1.2.2-1+b3) ...
Setting up libk5crypto3:armhf (1.15.2-2) ...
Setting up libxcb-render0:armhf (1.12-1) ...
Setting up po-debconf (1.0.20) ...
Setting up python-dev (2.7.14-1) ...
Setting up libx11-6:armhf (2:1.6.4-3) ...
Setting up python-pkg-resources (36.6.0-1) ...
Setting up libpython3.6-dev:armhf (3.6.3-1) ...
Setting up libxmuu1:armhf (2:1.1.2-2) ...
Setting up python-numpy (1:1.13.1-1) ...
Setting up libxcb-shm0:armhf (1.12-1) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libkrb5-3:armhf (1.15.2-2) ...
Setting up python-decorator (4.1.2-1) ...
Setting up libxft2:armhf (2.3.2-1+b2) ...
Setting up python3.6-dev (3.6.3-1) ...
Setting up fontconfig (2.12.3-0.2) ...
Regenerating fonts cache... done.
Setting up libpython3-dev:armhf (3.6.3-2) ...
Setting up python-setuptools (36.6.0-1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up python-scipy (0.19.1-1+b1) ...
Setting up libxss1:armhf (1:1.2.2-1) ...
Setting up libgssapi-krb5-2:armhf (1.15.2-2) ...
Setting up xauth (1:1.0.9-1) ...
Setting up libpango-1.0-0:armhf (1.40.12-1) ...
Setting up libcairo2:armhf (1.15.8-2) ...
Setting up libcurl3:armhf (7.56.1-1) ...
Setting up libtk8.6:armhf (8.6.7-1) ...
Setting up libpangoft2-1.0-0:armhf (1.40.12-1) ...
Setting up libpangocairo-1.0-0:armhf (1.40.12-1) ...
Setting up r-base-core (3.4.2-2) ...
Creating config file /etc/R/Renviron with new version
Setting up r-base-dev (3.4.2-2) ...
Setting up dh-autoreconf (14) ...
Setting up python3 (3.6.3-2) ...
Setting up python3-numpy (1:1.13.1-1) ...
Setting up python3-dev (3.6.3-2) ...
Setting up python3-pkg-resources (36.6.0-1) ...
Setting up dh-strip-nondeterminism (0.040-1) ...
Setting up python3-setuptools (36.6.0-1) ...
Setting up dh-python (2.20170125) ...
Setting up python3-decorator (4.1.2-1) ...
Setting up debhelper (10.10.5) ...
Setting up dh-r (20161219) ...
Setting up python3-scipy (0.19.1-1+b1) ...
Setting up sbuild-build-depends-r-cran-fastcluster-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.24-17) ...
Processing triggers for systemd (235-2) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.8.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.29.1-6+rpi1 dpkg-dev_1.19.0.4 g++-7_7.2.0-12 gcc-7_7.2.0-12 libc6-dev_2.24-17 libstdc++-7-dev_7.2.0-12 libstdc++6_7.2.0-12 linux-libc-dev_4.9.51-1+rpi3+b1
Package versions: adduser_3.116 apt_1.6~alpha3 autoconf_2.69-11 automake_1:1.15.1-3 autopoint_0.19.8.1-4 autotools-dev_20161112.1+nmu1 base-files_10+rpi1 base-passwd_3.5.44 bash_4.4-5 binutils_2.29.1-6+rpi1 binutils-arm-linux-gnueabihf_2.29.1-6+rpi1 binutils-common_2.29.1-6+rpi1 bsdmainutils_9.0.14 bsdutils_1:2.30.2-0.1 build-essential_12.4 bzip2_1.0.6-8.1 ca-certificates_20170717 cdbs_0.4.156 coreutils_8.28-1 cpio_2.11+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.2.0-12 dash_0.5.8-2.5 dctrl-tools_2.24-2 debconf_1.5.64 debhelper_10.10.5 debianutils_4.8.2 dh-autoreconf_14 dh-python_2.20170125 dh-r_20161219 dh-strip-nondeterminism_0.040-1 diffutils_1:3.6-1 dirmngr_2.2.1-5 dmsetup_2:1.02.142-1 dpkg_1.19.0.4 dpkg-dev_1.19.0.4 e2fslibs_1.43.7-1 e2fsprogs_1.43.7-1 e2fsprogs-l10n_1.43.7-1 fakeroot_1.22-1 fdisk_2.30.2-0.1 file_1:5.32-1 findutils_4.6.0+git+20170729-2 fontconfig_2.12.3-0.2 fontconfig-config_2.12.3-0.2 fonts-dejavu-core_2.37-1 g++_4:7.2.0-1d1 g++-7_7.2.0-12 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5-base_5.4.1-4 gcc-7_7.2.0-12 gcc-7-base_7.2.0-12 gettext_0.19.8.1-4 gettext-base_0.19.8.1-4 gfortran_4:7.2.0-1d1 gfortran-7_7.2.0-12 gnupg_2.2.1-5 gnupg-agent_2.2.1-5 gnupg-l10n_2.2.1-5 gnupg-utils_2.2.1-5 gpg_2.2.1-5 gpg-agent_2.2.1-5 gpg-wks-client_2.2.1-5 gpg-wks-server_2.2.1-5 gpgconf_2.2.1-5 gpgsm_2.2.1-5 gpgv_2.2.1-5 grep_3.1-2 groff-base_1.22.3-9 gzip_1.6-5 hostname_3.18 icu-devtools_57.1-8 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-9+rpi1 kmod_24-1 libacl1_2.2.52-3 libapparmor1_2.11.1-2 libapt-pkg5.0_1.6~alpha3 libarchive-zip-perl_1.59-1 libasan4_7.2.0-12 libassuan0_2.4.3-3 libatomic1_7.2.0-12 libattr1_1:2.4.47-2 libaudit-common_1:2.8.1-1 libaudit1_1:2.8.1-1 libbinutils_2.29.1-6+rpi1 libblas-dev_3.7.1-4 libblas3_3.7.1-4 libblkid1_2.30.2-0.1 libbsd0_0.8.6-2 libbz2-1.0_1.0.6-8.1 libbz2-dev_1.0.6-8.1 libc-bin_2.24-17 libc-dev-bin_2.24-17 libc6_2.24-17 libc6-dev_2.24-17 libcairo2_1.15.8-2 libcap-ng0_0.7.7-3.1+b1 libcap2_1:2.25-1.1 libcc1-0_7.2.0-12 libcilkrts5_7.2.0-12 libcomerr2_1.43.7-1 libcroco3_0.6.12-1 libcryptsetup4_2:1.7.5-1 libcurl3_7.56.1-1 libdatrie1_0.2.10-5 libdb5.3_5.3.28-13.1 libdbus-1-3_1.11.22-1 libdebconfclient0_0.232 libdevmapper1.02.1_2:1.02.142-1 libdpkg-perl_1.19.0.4 libdrm-common_2.4.84-2+rpi1 libdrm2_2.4.84-2+rpi1 libexpat1_2.2.3-1 libexpat1-dev_2.2.3-1 libfakeroot_1.22-1 libfdisk1_2.30.2-0.1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.040-1 libfontconfig1_2.12.3-0.2 libfreetype6_2.8.1-0.1 libgcc-7-dev_7.2.0-12 libgcc1_1:7.2.0-12 libgcrypt20_1.7.9-1 libgdbm3_1.8.3-14 libgfortran-7-dev_7.2.0-12 libgfortran4_7.2.0-12 libglib2.0-0_2.54.1-1 libgmp10_2:6.1.2+dfsg-1.1 libgnutls30_3.5.16-1 libgomp1_7.2.0-12 libgpg-error0_1.27-4 libgraphite2-3_1.3.10-6 libgssapi-krb5-2_1.15.2-2 libharfbuzz0b_1.6.2-1 libhogweed4_3.3-2 libice6_2:1.0.9-2 libicu-dev_57.1-8 libicu57_57.1-8 libidn11_1.33-2 libidn2-0_2.0.2-5 libip4tc0_1.6.1-2+b1 libisl15_0.18-1 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2 libjpeg62-turbo-dev_1:1.5.2-2 libk5crypto3_1.15.2-2 libkeyutils1_1.5.9-9 libklibc_2.0.4-9+rpi1 libkmod2_24-1 libkrb5-3_1.15.2-2 libkrb5support0_1.15.2-2 libksba8_1.3.5-2 liblapack-dev_3.7.1-4 liblapack3_3.7.1-4 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 liblz4-1_0.0~r131-2 liblzma-dev_5.2.2-1.3 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.32-1 libmagic1_1:5.32-1 libmount1_2.30.2-0.1 libmpc3_1.0.3-2 libmpdec2_2.4.2-1 libmpfr4_3.1.6-1 libncurses5_6.0+20170902-1 libncurses5-dev_6.0+20170902-1 libncursesw5_6.0+20170902-1 libnettle6_3.3-2 libnghttp2-14_1.27.0-1 libnih-dbus1_1.0.3-8 libnih1_1.0.3-8 libnpth0_1.5-2 libp11-kit0_0.23.9-2 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpango-1.0-0_1.40.12-1 libpangocairo-1.0-0_1.40.12-1 libpangoft2-1.0-0_1.40.12-1 libpaper-utils_1.1.24+nmu5 libpaper1_1.1.24+nmu5 libpcre16-3_2:8.39-4 libpcre3_2:8.39-4 libpcre3-dev_2:8.39-4 libpcre32-3_2:8.39-4 libpcrecpp0v5_2:8.39-4 libperl5.24_5.24.1-7 libperl5.26_5.26.1-2 libpipeline1_1.4.2-1 libpixman-1-0_0.34.0-1 libplymouth4_0.9.3-1 libpng-dev_1.6.34-1 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-3 libpsl5_0.18.0-4 libpython-dev_2.7.14-1 libpython-stdlib_2.7.14-1 libpython2.7_2.7.14-2 libpython2.7-dev_2.7.14-2 libpython2.7-minimal_2.7.14-2 libpython2.7-stdlib_2.7.14-2 libpython3-dev_3.6.3-2 libpython3-stdlib_3.6.3-2 libpython3.5-minimal_3.5.4-4 libpython3.5-stdlib_3.5.4-4 libpython3.6_3.6.3-1 libpython3.6-dev_3.6.3-1 libpython3.6-minimal_3.6.3-1 libpython3.6-stdlib_3.6.3-1 libreadline-dev_7.0-3 libreadline7_7.0-3 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3 libsasl2-modules_2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3 libseccomp2_2.3.1-2.1 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.11-1 libsm6_2:1.2.2-1+b3 libsmartcols1_2.30.2-0.1 libsqlite3-0_3.20.1-2 libss2_1.43.7-1 libssh2-1_1.8.0-1 libssl1.0.2_1.0.2m-3 libssl1.1_1.1.0f-5 libstdc++-7-dev_7.2.0-12 libstdc++6_7.2.0-12 libsystemd0_235-2 libtasn1-6_4.12-2.1 libtcl8.6_8.6.7+dfsg-1 libtext-charwidth-perl_0.04-7.1 libtext-iconv-perl_1.7-5+b9 libtext-wrapi18n-perl_0.06-7.1 libthai-data_0.1.27-1 libthai0_0.1.27-1 libtiff5_4.0.8-6 libtimedate-perl_2.3000-2 libtinfo-dev_6.0+20170902-1 libtinfo5_6.0+20170902-1 libtk8.6_8.6.7-1 libtool_2.4.6-2 libubsan0_7.2.0-12 libudev1_235-2 libunistring2_0.9.7-2 libustr-1.0-1_1.0.4-6 libuuid1_2.30.2-0.1 libx11-6_2:1.6.4-3 libx11-data_2:1.6.4-3 libxau6_1:1.0.8-1+b2 libxcb-render0_1.12-1 libxcb-shm0_1.12-1 libxcb1_1.12-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-1+b2 libxml2_2.9.4+dfsg1-5 libxmuu1_2:1.1.2-2 libxrender1_1:0.9.10-1 libxss1_1:1.2.2-1 libxt6_1:1.1.5-1 linux-base_4.5 linux-libc-dev_4.9.51-1+rpi3+b1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.7.6.1-2 mawk_1.3.3-17 mime-support_3.60 mount_2.30.2-0.1 mountall_2.54 multiarch-support_2.24-17 ncurses-base_6.0+20170902-1 ncurses-bin_6.0+20170902-1 openssl_1.1.0f-5 passwd_1:4.5-1 patch_2.7.5-1 perl_5.26.1-2 perl-base_5.26.1-2 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.1-2 pinentry-curses_1.0.0-3 pkg-config_0.29-4 plymouth_0.9.3-1 po-debconf_1.0.20 procps_2:3.3.12-3 python_2.7.14-1 python-decorator_4.1.2-1 python-dev_2.7.14-1 python-minimal_2.7.14-1 python-numpy_1:1.13.1-1 python-pkg-resources_36.6.0-1 python-scipy_0.19.1-1+b1 python-setuptools_36.6.0-1 python2.7_2.7.14-2 python2.7-dev_2.7.14-2 python2.7-minimal_2.7.14-2 python3_3.6.3-2 python3-decorator_4.1.2-1 python3-dev_3.6.3-2 python3-minimal_3.6.3-2 python3-numpy_1:1.13.1-1 python3-pkg-resources_36.6.0-1 python3-scipy_0.19.1-1+b1 python3-setuptools_36.6.0-1 python3.5_3.5.4-4 python3.5-minimal_3.5.4-4 python3.6_3.6.3-1 python3.6-dev_3.6.3-1 python3.6-minimal_3.6.3-1 r-base-core_3.4.2-2 r-base-dev_3.4.2-2 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-fastcluster-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.10 systemd_235-2 sysvinit-utils_2.88dsf-59.10 tar_1.29b-2 tzdata_2017c-1 ucf_3.0036 udev_235-2 unzip_6.0-21 util-linux_2.30.2-0.1 x11-common_1:7.7+19 xauth_1:1.0.9-1 xdg-utils_1.1.2-1 xz-utils_5.2.2-1.3 zip_3.0-11 zlib1g_1:1.2.8.dfsg-5 zlib1g-dev_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Fri Oct 13 22:33:41 2017 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tillea@rki.de"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-cran-fastcluster_1.1.24-1.dsc
dpkg-source: info: extracting r-cran-fastcluster in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-cran-fastcluster_1.1.24.orig.tar.gz
dpkg-source: info: unpacking r-cran-fastcluster_1.1.24-1.debian.tar.xz
Check disc space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 1.1.24-1+b1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-8c20d2e7-96f6-4514-b13c-5cec861c88a1
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package r-cran-fastcluster
dpkg-buildpackage: info: source version 1.1.24-1+b1
dpkg-buildpackage: info: source distribution buster-staging
dpkg-source --before-build r-cran-fastcluster-1.1.24
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --buildsystem R --with python2,python3 --buildsystem=pybuild --sourcedirectory=src/python
dh_testdir -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean || true
I: pybuild base:184: python2.7 setup.py clean
Version: 1.1.24
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
I: pybuild base:184: python3.6 setup.py clean
Version: 1.1.24
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.6/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.6' does not exist -- can't clean it
# Parts of the following are taken from the CDBS file for F.
if test -d src; then \
find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
find src src -regex ".*\.so" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
rm -rf tmp-install
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_clean -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
debian/rules build-arch
dh build-arch --buildsystem R --with python2,python3 --buildsystem=pybuild --sourcedirectory=src/python
dh_testdir -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_update_autotools_config -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_autoreconf -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_auto_configure -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
I: pybuild base:184: python2.7 setup.py config
Version: 1.1.24
running config
I: pybuild base:184: python3.6 setup.py config
Version: 1.1.24
running config
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build
I: pybuild base:184: /usr/bin/python setup.py build
Version: 1.1.24
running build
running build_py
copying fastcluster.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build
running build_ext
building '_fastcluster' extension
creating build
creating build/temp.linux-armhf-2.7
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c fastcluster_python.cpp -o build/temp.linux-armhf-2.7/fastcluster_python.o
cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
In file included from fastcluster_python.cpp:62:0:
../fastcluster.cpp:54:0: warning: ignoring #pragma STDC FENV_ACCESS [-Wunknown-pragmas]
#pragma STDC FENV_ACCESS on
../fastcluster.cpp:53:118: note: #pragma message: Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.
#pragma message("Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.")
^
arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/fastcluster_python.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/_fastcluster.so
I: pybuild base:184: /usr/bin/python3 setup.py build
Version: 1.1.24
running build
running build_py
copying fastcluster.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.6/build
running build_ext
building '_fastcluster' extension
creating build/temp.linux-armhf-3.6
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.6m -c fastcluster_python.cpp -o build/temp.linux-armhf-3.6/fastcluster_python.o
cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
In file included from fastcluster_python.cpp:62:0:
../fastcluster.cpp:54:0: warning: ignoring #pragma STDC FENV_ACCESS [-Wunknown-pragmas]
#pragma STDC FENV_ACCESS on
../fastcluster.cpp:53:118: note: #pragma message: Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.
#pragma message("Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.")
^
arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.6/fastcluster_python.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.6/build/_fastcluster.cpython-36m-arm-linux-gnueabihf.so
mkdir -p tmp-install
R CMD INSTALL -l tmp-install --clean .
* installing *source* package ‘fastcluster’ ...
** package ‘fastcluster’ successfully unpacked and MD5 sums checked
** libs
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
g++ -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-bsBMFt/r-base-3.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fastcluster_R.cpp -o fastcluster_R.o
In file included from fastcluster_R.cpp:36:0:
fastcluster.cpp:53:118: note: #pragma message: Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.
#pragma message("Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.")
^
g++ -shared -L/usr/lib/R/lib -Wl,-z,relro -o fastcluster.so fastcluster_R.o -L/usr/lib/R/lib -lR
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/tmp-install/fastcluster/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (fastcluster)
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
I: pybuild base:184: python2.7 setup.py test
Version: 1.1.24
running test
running egg_info
creating fastcluster.egg-info
writing requirements to fastcluster.egg-info/requires.txt
writing fastcluster.egg-info/PKG-INFO
writing top-level names to fastcluster.egg-info/top_level.txt
writing dependency_links to fastcluster.egg-info/dependency_links.txt
writing manifest file 'fastcluster.egg-info/SOURCES.txt'
reading manifest file 'fastcluster.egg-info/SOURCES.txt'
writing manifest file 'fastcluster.egg-info/SOURCES.txt'
running build_ext
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/_fastcluster.so ->
test (tests.fastcluster_test) ... ok
test_nan (tests.fastcluster_test) ...
Test program for the 'fastcluster' package.
Copyright:
* Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
* All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>
Dimension: 16
Number of points: 99
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 9
Number of points: 77
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 11
Number of points: 53
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 19
Number of points: 77
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 7
Number of points: 23
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 5
Number of points: 64
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 10
Number of points: 38
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 10
Number of points: 16
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 17
Number of points: 76
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 14
Number of points: 26
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Test program for the 'fasok
test_vector (tests.fastcluster_test) ... tcluster' package.
Copyright:
* Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
* All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>
Test program for the 'fastcluster' package.
Copyright:
* Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
* All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>
Seed: 949693490
Dimension: 8
Number of points: 29
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 1.18718213724...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 7
Number of points: 162
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 6.32608901505...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 5
Number of points: 126
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 5.06159907663...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 12
Number of points: 122
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 1.39687374475...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 7
Number of points: 139
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 1.44403125...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 11
Number of points: 44
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 7.9703060559...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 3
Number of points: 164
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 6.95223504357...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 11
Number of points: 111
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 2.18798250435...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: ok
----------------------------------------------------------------------
Ran 3 tests in 580.651s
OK
single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 12
Number of points: 145
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 5.45037104402...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 2
Number of points: 107
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 9.28946873989...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Skip this test: NaN dissimilarity value.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
I: pybuild base:184: python3.6 setup.py test
Version: 1.1.24
running test
running egg_info
writing fastcluster.egg-info/PKG-INFO
writing dependency_links to fastcluster.egg-info/dependency_links.txt
writing requirements to fastcluster.egg-info/requires.txt
writing top-level names to fastcluster.egg-info/top_level.txt
reading manifest file 'fastcluster.egg-info/SOURCES.txt'
writing manifest file 'fastcluster.egg-info/SOURCES.txt'
running build_ext
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.6/build/_fastcluster.cpython-36m-arm-linux-gnueabihf.so ->
test (tests.fastcluster_test) ... /usr/lib/python3.6/importlib/_bootstrap.py:219: ImportWarning: can't resolve package from __spec__ or __package__, falling back on __name__ and __path__
return f(*args, **kwds)
ok
test_nan (tests.fastcluster_test) ... ok
test_vector (tests.fastcluster_test) ...
Test program for the 'fastcluster' package.
Copyright:
* Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
* All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>
Dimension: 17
Number of points: 9
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 3
Number of points: 89
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 7
Number of points: 86
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 19
Number of points: 46
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 7
Number of points: 12
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 18
Number of points: 91
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 4
Number of points: 35
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 12
Number of points: 56
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 18
Number of points: 2
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 10
Number of points: 70
Real distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Integer distance values:
Method: single...OK.
Method: complete...OK.
Method: average...OK.
Method: weighted...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Test program for the 'fastcluster' package.
Copyright:
* Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
* All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>
Test program for the 'fastcluster' package.
Copyright:
* Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
* All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>
Seed: 874982509
Dimension: 9
Number of points: 32
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 6.225274064974028...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 9
Number of points: 48
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 9.433940873299735...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 4
Number of points: 128
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 3.1557004943528404...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 3
Number of points: 94
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 5.248046677112225...Method: single...OK.
Metric: cosine...ok
----------------------------------------------------------------------
Ran 3 tests in 855.799s
OK
Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 10
Number of points: 179
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 2.715433595542396...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 7
Number of points: 164
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 1.9684168043400838...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 2
Number of points: 195
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 4.545894372157788...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Skip this test: NaN dissimilarity value.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 5
Number of points: 26
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 6.530709796843826...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 12
Number of points: 185
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Method: single...OK.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 8.977766129939917...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Dimension: 6
Number of points: 142
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: yule...Skip this test: NaN dissimilarity value.
Metric: matching...Method: single...OK.
Metric: dice...Method: single...OK.
Metric: rogerstanimoto...Method: single...OK.
Metric: russellrao...Method: single...OK.
Metric: sokalsneath...Method: single...OK.
Metric: euclidean...Method: single...OK.
Metric: sqeuclidean...Method: single...OK.
Metric: cityblock...Method: single...OK.
Metric: chebychev...Method: single...OK.
Metric: minkowski...p: 2.462400718561699...Method: single...OK.
Metric: cosine...Method: single...OK.
Metric: correlation...Method: single...OK.
Metric: hamming...Method: single...OK.
Metric: jaccard...Method: single...OK.
Metric: canberra...Method: single...OK.
Metric: braycurtis...Method: single...OK.
Metric: seuclidean...Method: single...OK.
Metric: mahalanobis...Method: single...OK.
Metric: user...Method: single...OK.
Method: ward...OK.
Method: centroid...OK.
Method: median...OK.
Seed: 874982509
Seed: 553383373
Seed: 366730622
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch --buildsystem R --with python2,python3 --buildsystem=pybuild --sourcedirectory=src/python
dh_testroot -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_prep -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installdirs -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_auto_install -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
I: pybuild base:184: /usr/bin/python setup.py install --root /<<PKGBUILDDIR>>/debian/python-fastcluster
Version: 1.1.24
running install
running build
running build_py
running build_ext
running install_lib
creating /<<PKGBUILDDIR>>/debian/python-fastcluster/usr
creating /<<PKGBUILDDIR>>/debian/python-fastcluster/usr/lib
creating /<<PKGBUILDDIR>>/debian/python-fastcluster/usr/lib/python2.7
creating /<<PKGBUILDDIR>>/debian/python-fastcluster/usr/lib/python2.7/dist-packages
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/fastcluster.py -> /<<PKGBUILDDIR>>/debian/python-fastcluster/usr/lib/python2.7/dist-packages
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/_fastcluster.so -> /<<PKGBUILDDIR>>/debian/python-fastcluster/usr/lib/python2.7/dist-packages
byte-compiling /<<PKGBUILDDIR>>/debian/python-fastcluster/usr/lib/python2.7/dist-packages/fastcluster.py to fastcluster.pyc
running install_egg_info
running egg_info
writing requirements to fastcluster.egg-info/requires.txt
writing fastcluster.egg-info/PKG-INFO
writing top-level names to fastcluster.egg-info/top_level.txt
writing dependency_links to fastcluster.egg-info/dependency_links.txt
reading manifest file 'fastcluster.egg-info/SOURCES.txt'
writing manifest file 'fastcluster.egg-info/SOURCES.txt'
Copying fastcluster.egg-info to /<<PKGBUILDDIR>>/debian/python-fastcluster/usr/lib/python2.7/dist-packages/fastcluster-1.1.24.egg-info
Skipping SOURCES.txt
running install_scripts
I: pybuild base:184: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-fastcluster
Version: 1.1.24
running install
running build
running build_py
running build_ext
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr
creating /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib
creating /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.6
creating /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.6/dist-packages
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.6/build/fastcluster.py -> /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.6/dist-packages
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.6/build/_fastcluster.cpython-36m-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.6/dist-packages
byte-compiling /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.6/dist-packages/fastcluster.py to fastcluster.cpython-36.pyc
running install_egg_info
running egg_info
writing fastcluster.egg-info/PKG-INFO
writing dependency_links to fastcluster.egg-info/dependency_links.txt
writing requirements to fastcluster.egg-info/requires.txt
writing top-level names to fastcluster.egg-info/top_level.txt
reading manifest file 'fastcluster.egg-info/SOURCES.txt'
writing manifest file 'fastcluster.egg-info/SOURCES.txt'
Copying fastcluster.egg-info to /<<PKGBUILDDIR>>/debian/python3-fastcluster/usr/lib/python3.6/dist-packages/fastcluster-1.1.24.egg-info
Skipping SOURCES.txt
running install_scripts
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_numpy
dh_numpy3
dh_install
find debian -name LICENSE -delete
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installchangelogs -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installexamples -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installman -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installcatalogs -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installcron -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installdebconf -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installemacsen -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installifupdown -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installinfo -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_systemd_enable -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_python2 -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
I: dh_python2 fs:322: renaming _fastcluster.so to _fastcluster.arm-linux-gnueabihf.so
dh_python3 -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installinit -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_systemd_start -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installmenu -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installmime -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installmodules -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installlogcheck -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installlogrotate -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installpam -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installppp -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installudev -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installgsettings -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_bugfiles -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_ucf -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_lintian -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_gconf -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_icons -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_perl -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_usrlocal -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_link -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installwm -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_installxfonts -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_strip_nondeterminism -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_compress -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_fixperms -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_missing -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_strip -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_makeshlibs -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_shlibdeps -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-fastcluster/usr/lib/python2.7/dist-packages/_fastcluster.arm-linux-gnueabihf.so was not linked against libpthread.so.0 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-fastcluster/usr/lib/python3/dist-packages/_fastcluster.cpython-36m-arm-linux-gnueabihf.so was not linked against libpthread.so.0 (it uses none of the library's symbols)
dh_installdeb -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_gencontrol -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dpkg-gencontrol: warning: Depends field of package r-cran-fastcluster: unknown substitution variable ${R:Depends}
dpkg-gencontrol: warning: Recommends field of package r-cran-fastcluster: unknown substitution variable ${R:Recommends}
dpkg-gencontrol: warning: Suggests field of package r-cran-fastcluster: unknown substitution variable ${R:Suggests}
dpkg-gencontrol: warning: package python3-fastcluster: unused substitution variable ${python3:Provides}
dpkg-gencontrol: warning: package python3-fastcluster: unused substitution variable ${python3:Versions}
dpkg-gencontrol: warning: package python3-fastcluster: unused substitution variable ${python:Depends}
dpkg-gencontrol: warning: package python-fastcluster: unused substitution variable ${python3:Depends}
dpkg-gencontrol: warning: package python-fastcluster: unused substitution variable ${python:Provides}
dpkg-gencontrol: warning: package python-fastcluster: unused substitution variable ${python:Versions}
dpkg-gencontrol: warning: package r-cran-fastcluster: unused substitution variable ${python3:Depends}
dpkg-gencontrol: warning: package r-cran-fastcluster: unused substitution variable ${python:Depends}
dpkg-gencontrol: warning: Depends field of package r-cran-fastcluster: unknown substitution variable ${R:Depends}
dpkg-gencontrol: warning: Recommends field of package r-cran-fastcluster: unknown substitution variable ${R:Recommends}
dpkg-gencontrol: warning: Suggests field of package r-cran-fastcluster: unknown substitution variable ${R:Suggests}
dpkg-gencontrol: warning: package python3-fastcluster: unused substitution variable ${python3:Provides}
dpkg-gencontrol: warning: package python3-fastcluster: unused substitution variable ${python3:Versions}
dpkg-gencontrol: warning: package python3-fastcluster: unused substitution variable ${python:Depends}
dpkg-gencontrol: warning: package python-fastcluster: unused substitution variable ${python3:Depends}
dpkg-gencontrol: warning: package python-fastcluster: unused substitution variable ${python:Provides}
dpkg-gencontrol: warning: package python-fastcluster: unused substitution variable ${python:Versions}
dpkg-gencontrol: warning: package r-cran-fastcluster: unused substitution variable ${python3:Depends}
dpkg-gencontrol: warning: package r-cran-fastcluster: unused substitution variable ${python:Depends}
dh_md5sums -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
dh_builddeb -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
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dpkg-deb: building package 'python-fastcluster' in '../python-fastcluster_1.1.24-1+b1_armhf.deb'.
dpkg-deb: building package 'python3-fastcluster' in '../python3-fastcluster_1.1.24-1+b1_armhf.deb'.
dpkg-deb: building package 'python-fastcluster-dbgsym' in '../python-fastcluster-dbgsym_1.1.24-1+b1_armhf.deb'.
dpkg-deb: building package 'python3-fastcluster-dbgsym' in '../python3-fastcluster-dbgsym_1.1.24-1+b1_armhf.deb'.
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dpkg-genbuildinfo --build=any
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dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build r-cran-fastcluster-1.1.24
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2017-11-09T06:52:49Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
r-cran-fastcluster_1.1.24-1+b1_armhf.changes:
---------------------------------------------
Format: 1.8
Date: Thu, 12 Oct 2017 17:03:04 +0200
Source: r-cran-fastcluster (1.1.24-1)
Binary: r-cran-fastcluster python-fastcluster python3-fastcluster
Binary-Only: yes
Architecture: armhf
Version: 1.1.24-1+b1
Distribution: buster-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
python-fastcluster - Fast hierarchical clustering routines for Python
python3-fastcluster - Fast hierarchical clustering routines for Python 3
r-cran-fastcluster - Fast hierarchical clustering routines for GNU R
Changes:
r-cran-fastcluster (1.1.24-1+b1) buster-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
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| Package contents |
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python-fastcluster-dbgsym_1.1.24-1+b1_armhf.deb
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python-fastcluster_1.1.24-1+b1_armhf.deb
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Package: python-fastcluster
Source: r-cran-fastcluster (1.1.24-1)
Version: 1.1.24-1+b1
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Recommends: python-scipy
Section: python
Priority: optional
Homepage: https://cran.r-project.org/package=fastcluster
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.
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.
The interface is very similar to MATLAB's Statistics Toolbox API to
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-----------------------------------------
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Recommends: python3-scipy
Section: python
Priority: optional
Homepage: https://cran.r-project.org/package=fastcluster
Description: Fast hierarchical clustering routines for Python 3
This library provides Python functions for hierarchical
clustering. It generates hierarchical clusters from distance matrices
or from vector data.
.
Part of this module is intended to replace the functions
.
linkage, single, complete, average, weighted, centroid, median, ward
.
in the module scipy.cluster.hierarchy with the same functionality but
much faster algorithms. Moreover, the function 'linkage_vector'
provides memory-efficient clustering for vector data.
.
The interface is very similar to MATLAB's Statistics Toolbox API to
make code easier to port from MATLAB to Python/Numpy. The core
implementation of this library is in C++ for efficiency.
.
This package provides the package's Python 3 interface.
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r-cran-fastcluster-dbgsym_1.1.24-1+b1_armhf.deb
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r-cran-fastcluster_1.1.24-1+b1_armhf.deb
----------------------------------------
new Debian package, version 2.0.
size 178280 bytes: control archive=1844 bytes.
1052 bytes, 20 lines control
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Installed-Size: 284
Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.5), libstdc++6 (>= 5.2)
Section: gnu-r
Priority: optional
Homepage: https://cran.r-project.org/package=fastcluster
Description: Fast hierarchical clustering routines for GNU R
Fastcluster implements fast hierarchical, agglomerative clustering
routines. Part of the functionality is designed as drop-in replacement
for existing routines: “linkage” in the SciPy package
“scipy.cluster.hierarchy”, “hclust” in R's “stats” package, and the
“flashClust” package. It provides the same functionality with the
benefit of a much faster implementation. Moreover, there are
memory-saving routines for clustering of vector data, which go beyond
what the existing packages provide. For information on how to install
the Python files, see the file INSTALL in the source distribution.
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
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| Summary |
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Build Architecture: armhf
Build-Space: 5216
Build-Time: 1614
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 1877
Job: r-cran-fastcluster_1.1.24-1
Machine Architecture: armhf
Package: r-cran-fastcluster
Package-Time: 3550
Source-Version: 1.1.24-1
Space: 5216
Status: successful
Version: 1.1.24-1+b1
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Finished at 2017-11-09T06:52:49Z
Build needed 00:59:10, 5216k disc space