Raspbian Package Auto-Building

r-cran-fastcluster → 1.1.24-1+b1 → armhf → 2017-10-28 17:53:14

sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01

+==============================================================================+
| r-cran-fastcluster 1.1.24-1+b1 (armhf)       Sat, 28 Oct 2017 04:44:20 +0000 |
+==============================================================================+

Package: r-cran-fastcluster
Version: 1.1.24-1+b1
Source Version: 1.1.24-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-9bae0f84-4ca2-4f86-80dc-90aeffaadca6' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.3 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.1 MB]
Fetched 22.4 MB in 8s (2749 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'r-cran-fastcluster' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/r-cran-fastcluster.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/r-cran-fastcluster.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 195 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main r-cran-fastcluster 1.1.24-1 (dsc) [2421 B]
Get:2 http://172.17.0.1/private buster-staging/main r-cran-fastcluster 1.1.24-1 (tar) [189 kB]
Get:3 http://172.17.0.1/private buster-staging/main r-cran-fastcluster 1.1.24-1 (diff) [4024 B]
Fetched 195 kB in 0s (526 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-cran-fastcluster-SsWp4u/r-cran-fastcluster-1.1.24' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-cran-fastcluster-SsWp4u' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-uHcDXh/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-uHcDXh/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-uHcDXh/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-uHcDXh/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-uHcDXh/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-uHcDXh/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-uHcDXh/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-uHcDXh/apt_archive ./ Packages [429 B]
Fetched 2105 B in 0s (6736 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  ca-certificates libreadline5 libsasl2-modules libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 73 not upgraded.
Need to get 772 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-uHcDXh/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [772 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 772 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15082 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper (>= 10), dh-python, dh-r, r-base-dev, python-dev, python-numpy, python-setuptools, python-scipy, python3-dev, python3-numpy, python3-setuptools, python3-scipy
Filtered Build-Depends: debhelper (>= 10), dh-python, dh-r, r-base-dev, python-dev, python-numpy, python-setuptools, python-scipy, python3-dev, python3-numpy, python3-setuptools, python3-scipy
dpkg-deb: building package 'sbuild-build-depends-r-cran-fastcluster-dummy' in '/<<BUILDDIR>>/resolver-uHcDXh/apt_archive/sbuild-build-depends-r-cran-fastcluster-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-r-cran-fastcluster-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-uHcDXh/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-uHcDXh/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-uHcDXh/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-uHcDXh/apt_archive ./ Sources [549 B]
Get:5 copy:/<<BUILDDIR>>/resolver-uHcDXh/apt_archive ./ Packages [628 B]
Fetched 2510 B in 0s (7955 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install r-cran-fastcluster build dependencies (apt-based resolver)
------------------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libreadline5 libsasl2-modules
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils cdbs cpp-7
  dctrl-tools debhelper dh-autoreconf dh-python dh-r dh-strip-nondeterminism
  file fontconfig fontconfig-config fonts-dejavu-core g++-7 gcc-7 gcc-7-base
  gettext gettext-base gfortran gfortran-7 groff-base icu-devtools
  intltool-debian libarchive-zip-perl libasan4 libatomic1 libblas-dev libblas3
  libbsd0 libbz2-dev libcairo2 libcc1-0 libcilkrts5 libcroco3 libcurl3
  libdatrie1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl
  libfontconfig1 libfreetype6 libgcc-7-dev libgcc1 libgfortran-7-dev
  libgfortran4 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2
  libharfbuzz0b libice6 libicu-dev libicu57 libjbig0 libjpeg-dev
  libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3
  libkrb5support0 liblapack-dev liblapack3 liblzma-dev libmagic-mgc libmagic1
  libmpdec2 libncurses5-dev libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0
  libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre3-dev
  libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16
  libpsl5 libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev
  libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib
  libpython3.5-minimal libpython3.5-stdlib libpython3.6 libpython3.6-dev
  libpython3.6-minimal libpython3.6-stdlib libreadline-dev librtmp1
  libsigsegv2 libsm6 libssh2-1 libssl1.0.2 libstdc++-7-dev libstdc++6
  libtcl8.6 libthai-data libthai0 libtiff5 libtimedate-perl libtinfo-dev
  libtk8.6 libtool libubsan0 libx11-6 libx11-data libxau6 libxcb-render0
  libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1
  libxss1 libxt6 m4 man-db mime-support pkg-config po-debconf python
  python-decorator python-dev python-minimal python-numpy python-pkg-resources
  python-scipy python-setuptools python2.7 python2.7-dev python2.7-minimal
  python3 python3-decorator python3-dev python3-minimal python3-numpy
  python3-pkg-resources python3-scipy python3-setuptools python3.5
  python3.5-minimal python3.6 python3.6-dev python3.6-minimal r-base-core
  r-base-dev ucf unzip x11-common xauth xdg-utils zip zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation devscripts gcc-7-locales debtags dh-make gcc-7-doc libstdc++6-7-dbg
  libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg libasan4-dbg
  liblsan0-dbg libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx2-dbg
  libquadmath0-dbg gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc
  gfortran-7-doc libgfortran4-dbg libcoarrays-dev groff liblapack-doc krb5-doc
  krb5-user icu-doc liblzma-doc ncurses-doc readline-doc libstdc++-7-doc
  tcl8.6 tk8.6 libtool-doc gcj-jdk m4-doc less www-browser libmail-box-perl
  python-doc python-tk python-nose python-numpy-dbg python-numpy-doc
  python-scipy-doc python-setuptools-doc python2.7-doc binfmt-support
  python3-doc python3-tk python3-venv python3-nose python3-numpy-dbg
  python3.5-venv python3.5-doc python3.6-venv python3.6-doc ess r-doc-info
  | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
  texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
  texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
  gvfs-bin
Recommended packages:
  curl | wget | lynx-cur bzip2-doc libarchive-cpio-perl libglib2.0-data
  shared-mime-info xdg-user-dirs krb5-locales libpng-tools publicsuffix
  libltdl-dev libmail-sendmail-perl python-imaging r-recommended r-doc-html
  libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
  x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils cdbs dctrl-tools
  debhelper dh-autoreconf dh-python dh-r dh-strip-nondeterminism file
  fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
  gfortran-7 groff-base icu-devtools intltool-debian libarchive-zip-perl
  libblas-dev libblas3 libbsd0 libbz2-dev libcairo2 libcroco3 libcurl3
  libdatrie1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl
  libfontconfig1 libfreetype6 libgfortran-7-dev libgfortran4 libglib2.0-0
  libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu-dev libicu57
  libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3
  libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblzma-dev
  libmagic-mgc libmagic1 libmpdec2 libncurses5-dev libnghttp2-14
  libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
  libpaper1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1
  libpixman-1-0 libpng-dev libpsl5 libpython-dev libpython-stdlib libpython2.7
  libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev
  libpython3-stdlib libpython3.5-minimal libpython3.5-stdlib libpython3.6
  libpython3.6-dev libpython3.6-minimal libpython3.6-stdlib libreadline-dev
  librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.0.2 libtcl8.6 libthai-data
  libthai0 libtiff5 libtimedate-perl libtinfo-dev libtk8.6 libtool libx11-6
  libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
  libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 m4 man-db mime-support
  pkg-config po-debconf python python-decorator python-dev python-minimal
  python-numpy python-pkg-resources python-scipy python-setuptools python2.7
  python2.7-dev python2.7-minimal python3 python3-decorator python3-dev
  python3-minimal python3-numpy python3-pkg-resources python3-scipy
  python3-setuptools python3.5 python3.5-minimal python3.6 python3.6-dev
  python3.6-minimal r-base-core r-base-dev
  sbuild-build-depends-r-cran-fastcluster-dummy ucf unzip x11-common xauth
  xdg-utils zip zlib1g-dev
The following packages will be upgraded:
  cpp-7 g++-7 gcc-7 gcc-7-base libasan4 libatomic1 libcc1-0 libcilkrts5
  libgcc-7-dev libgcc1 libgomp1 libpng16-16 libstdc++-7-dev libstdc++6
  libubsan0
15 upgraded, 156 newly installed, 0 to remove and 58 not upgraded.
Need to get 169 MB of archives.
After this operation, 173 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-uHcDXh/apt_archive ./ sbuild-build-depends-r-cran-fastcluster-dummy 0.invalid.0 [838 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libgomp1 armhf 7.2.0-11 [63.1 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf gcc-7-base armhf 7.2.0-11 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libgcc1 armhf 1:7.2.0-11 [38.6 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libatomic1 armhf 7.2.0-11 [6732 B]
Get:6 http://172.17.0.1/private buster-staging/main armhf libasan4 armhf 7.2.0-11 [302 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libubsan0 armhf 7.2.0-11 [106 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libcilkrts5 armhf 7.2.0-11 [35.3 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf cpp-7 armhf 7.2.0-11 [5136 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libcc1-0 armhf 7.2.0-11 [30.3 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf g++-7 armhf 7.2.0-11 [5585 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf gcc-7 armhf 7.2.0-11 [5458 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libgcc-7-dev armhf 7.2.0-11 [670 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libstdc++-7-dev armhf 7.2.0-11 [1500 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libstdc++6 armhf 7.2.0-11 [335 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.8.6-2 [95.8 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 9.0.14 [178 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.4.2-1 [24.2 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.7.6.1-2 [1014 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libexpat1 armhf 2.2.3-1 [67.1 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libpng16-16 armhf 1.6.34-1 [270 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.8-0.2 [393 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0036 [70.2 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.12.3-0.2 [304 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.12.3-0.2 [349 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.12.3-0.2 [435 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.12-1 [129 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.4-3 [290 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.4-3 [683 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf x11-common all 1:7.7+19 [251 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libxss1 armhf 1:1.2.2-1 [16.8 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.14-2 [393 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.14-2 [1091 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.14-1 [40.7 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.60 [36.7 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.14-2 [1854 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.14-2 [292 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.14-1 [20.1 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.14-1 [155 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libpython3.6-minimal armhf 3.6.3-1 [564 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf python3.6-minimal armhf 3.6.3-1 [1232 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf python3-minimal armhf 3.6.3-1 [35.6 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-1 [67.5 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libpython3.6-stdlib armhf 3.6.3-1 [2055 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf python3.6 armhf 3.6.3-1 [218 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.6.3-1 [19.0 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf dh-python all 2.20170125 [86.8 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.6.3-1 [22.1 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libpython3.5-minimal armhf 3.5.4-4 [572 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf python3.5-minimal armhf 3.5.4-4 [1431 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libssl1.0.2 armhf 1.0.2l-2 [893 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.32-1 [225 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.32-1 [105 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.32-1 [63.7 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-4 [117 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libkeyutils1 armhf 1.5.9-9 [11.9 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libkrb5support0 armhf 1.15.1-2 [58.4 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libk5crypto3 armhf 1.15.1-2 [115 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libkrb5-3 armhf 1.15.1-2 [265 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libgssapi-krb5-2 armhf 1.15.1-2 [132 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libicu57 armhf 57.1-8 [7411 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-5 [609 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.11-1 [29.3 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20161112.1 [73.4 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3 [736 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-4 [434 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf cdbs all 0.4.156 [83.1 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf dctrl-tools armhf 2.24-2 [94.4 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 14 [15.9 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.59-1 [95.5 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.039-1 [18.2 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.039-1 [11.6 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.54.1-1 [2653 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-1 [132 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-4 [1218 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf debhelper all 10.9.2 [979 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf unzip armhf 6.0-21 [149 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.24+nmu5 [20.8 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.24+nmu5 [17.2 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.1-1 [71.1 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.2.0-11 [191 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.7.1-4 [103 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf libpixman-1-0 armhf 0.34.0-1 [451 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.12-1 [104 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.12-1 [95.9 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.14.10-1 [692 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.26.0-1 [72.2 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.18.0-4 [42.4 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-1 [54.2 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-1 [126 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf libcurl3 armhf 7.55.1-1 [264 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2 [110 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.7.1-4 [1508 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.26-3 [166 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.10-5 [33.0 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.26-3 [49.6 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.40.12-1 [179 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.10-6 [71.5 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 1.5.1-1 [661 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.40.12-1 [72.0 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.40.12-1 [61.2 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf libsm6 armhf 2:1.2.2-1+b3 [31.2 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf libtcl8.6 armhf 8.6.7+dfsg-1 [869 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:119 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.8-5 [218 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf libxft2 armhf 2.3.2-1+b2 [49.3 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf libtk8.6 armhf 8.6.7-1 [660 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf libxt6 armhf 1:1.1.5-1 [155 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf r-base-core armhf 3.4.2-1 [22.9 MB]
Get:124 http://172.17.0.1/private buster-staging/main armhf libgfortran-7-dev armhf 7.2.0-11 [231 kB]
Get:125 http://172.17.0.1/private buster-staging/main armhf gfortran-7 armhf 7.2.0-11 [5441 kB]
Get:126 http://172.17.0.1/private buster-staging/main armhf gfortran armhf 4:7.2.0-1d1 [1352 B]
Get:127 http://172.17.0.1/private buster-staging/main armhf libblas-dev armhf 3.7.1-4 [112 kB]
Get:128 http://172.17.0.1/private buster-staging/main armhf liblapack-dev armhf 3.7.1-4 [1564 kB]
Get:129 http://172.17.0.1/private buster-staging/main armhf libtinfo-dev armhf 6.0+20170902-1 [66.6 kB]
Get:130 http://172.17.0.1/private buster-staging/main armhf libncurses5-dev armhf 6.0+20170902-1 [151 kB]
Get:131 http://172.17.0.1/private buster-staging/main armhf libreadline-dev armhf 7.0-3 [109 kB]
Get:132 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2 [178 kB]
Get:133 http://172.17.0.1/private buster-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:134 http://172.17.0.1/private buster-staging/main armhf libpcre16-3 armhf 2:8.39-4 [235 kB]
Get:135 http://172.17.0.1/private buster-staging/main armhf libpcre32-3 armhf 2:8.39-4 [227 kB]
Get:136 http://172.17.0.1/private buster-staging/main armhf libpcrecpp0v5 armhf 2:8.39-4 [149 kB]
Get:137 http://172.17.0.1/private buster-staging/main armhf libpcre3-dev armhf 2:8.39-4 [565 kB]
Get:138 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.8.dfsg-5 [198 kB]
Get:139 http://172.17.0.1/private buster-staging/main armhf libpng-dev armhf 1.6.34-1 [274 kB]
Get:140 http://172.17.0.1/private buster-staging/main armhf libbz2-dev armhf 1.0.6-8.1 [26.9 kB]
Get:141 http://172.17.0.1/private buster-staging/main armhf liblzma-dev armhf 5.2.2-1.3 [284 kB]
Get:142 http://172.17.0.1/private buster-staging/main armhf icu-devtools armhf 57.1-8 [156 kB]
Get:143 http://172.17.0.1/private buster-staging/main armhf libicu-dev armhf 57.1-8 [15.8 MB]
Get:144 http://172.17.0.1/private buster-staging/main armhf libxmuu1 armhf 2:1.1.2-2 [23.0 kB]
Get:145 http://172.17.0.1/private buster-staging/main armhf xauth armhf 1:1.0.9-1 [35.6 kB]
Get:146 http://172.17.0.1/private buster-staging/main armhf pkg-config armhf 0.29-4 [59.2 kB]
Get:147 http://172.17.0.1/private buster-staging/main armhf r-base-dev all 3.4.2-1 [4408 B]
Get:148 http://172.17.0.1/private buster-staging/main armhf dh-r all 20161219 [8794 B]
Get:149 http://172.17.0.1/private buster-staging/main armhf libexpat1-dev armhf 2.2.3-1 [120 kB]
Get:150 http://172.17.0.1/private buster-staging/main armhf libpython2.7 armhf 2.7.14-2 [904 kB]
Get:151 http://172.17.0.1/private buster-staging/main armhf libpython2.7-dev armhf 2.7.14-2 [27.6 MB]
Get:152 http://172.17.0.1/private buster-staging/main armhf libpython-dev armhf 2.7.14-1 [20.1 kB]
Get:153 http://172.17.0.1/private buster-staging/main armhf libpython3.6 armhf 3.6.3-1 [1228 kB]
Get:154 http://172.17.0.1/private buster-staging/main armhf libpython3.6-dev armhf 3.6.3-1 [2252 kB]
Get:155 http://172.17.0.1/private buster-staging/main armhf libpython3-dev armhf 3.6.3-1 [19.1 kB]
Get:156 http://172.17.0.1/private buster-staging/main armhf libpython3.5-stdlib armhf 3.5.4-4 [2095 kB]
Get:157 http://172.17.0.1/private buster-staging/main armhf python-decorator all 4.1.2-1 [13.7 kB]
Get:158 http://172.17.0.1/private buster-staging/main armhf python2.7-dev armhf 2.7.14-2 [295 kB]
Get:159 http://172.17.0.1/private buster-staging/main armhf python-dev armhf 2.7.14-1 [1130 B]
Get:160 http://172.17.0.1/private buster-staging/main armhf python-numpy armhf 1:1.13.1-1 [1727 kB]
Get:161 http://172.17.0.1/private buster-staging/main armhf python-pkg-resources all 36.2.7-2 [169 kB]
Get:162 http://172.17.0.1/private buster-staging/main armhf python-setuptools all 36.2.7-2 [302 kB]
Get:163 http://172.17.0.1/private buster-staging/main armhf python3-decorator all 4.1.2-1 [13.7 kB]
Get:164 http://172.17.0.1/private buster-staging/main armhf python3.6-dev armhf 3.6.3-1 [510 kB]
Get:165 http://172.17.0.1/private buster-staging/main armhf python3-dev armhf 3.6.3-1 [1158 B]
Get:166 http://172.17.0.1/private buster-staging/main armhf python3.5 armhf 3.5.4-4 [241 kB]
Get:167 http://172.17.0.1/private buster-staging/main armhf python3-numpy armhf 1:1.13.1-1 [1885 kB]
Get:168 http://172.17.0.1/private buster-staging/main armhf python3-pkg-resources all 36.2.7-2 [140 kB]
Get:169 http://172.17.0.1/private buster-staging/main armhf python3-setuptools all 36.2.7-2 [220 kB]
Get:170 http://172.17.0.1/private buster-staging/main armhf python-scipy armhf 0.19.1-1 [8548 kB]
Get:171 http://172.17.0.1/private buster-staging/main armhf python3-scipy armhf 0.19.1-1 [9522 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up libatomic1:armhf (7.2.0-11) ...
Setting up libcc1-0:armhf (7.2.0-11) ...
Setting up libbz2-dev:armhf (1.0.6-8.1) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2) ...
Setting up libarchive-zip-perl (1.59-1) ...
Setting up libnghttp2-14:armhf (1.26.0-1) ...
Setting up mime-support (3.60) ...
Setting up libasan4:armhf (7.2.0-11) ...
Setting up libgfortran4:armhf (7.2.0-11) ...
Setting up libpng16-16:armhf (1.6.34-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libsigsegv2:armhf (2.11-1) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up libcilkrts5:armhf (7.2.0-11) ...
Setting up libpsl5:armhf (0.18.0-4) ...
Setting up libubsan0:armhf (7.2.0-11) ...
Setting up groff-base (1.22.3-9) ...
Setting up libglib2.0-0:armhf (2.54.1-1) ...
No schema files found: doing nothing.
Setting up unzip (6.0-21) ...
Setting up libtinfo-dev:armhf (6.0+20170902-1) ...
Setting up dctrl-tools (2.24-2) ...
Setting up libdatrie1:armhf (0.2.10-5) ...
Setting up libtiff5:armhf (4.0.8-5) ...
Setting up gettext-base (0.19.8.1-4) ...
Setting up libpipeline1:armhf (1.4.2-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-1) ...
Setting up m4 (1.4.18-1) ...
Setting up libicu57:armhf (57.1-8) ...
Setting up libbsd0:armhf (0.8.6-2) ...
Setting up ucf (3.0036) ...
Setting up libxml2:armhf (2.9.4+dfsg1-5) ...
Setting up zip (3.0-11) ...
Setting up libgcc-7-dev:armhf (7.2.0-11) ...
Setting up cpp-7 (7.2.0-11) ...
Setting up libfreetype6:armhf (2.8-0.2) ...
Setting up libmagic-mgc (1:5.32-1) ...
Setting up libmagic1:armhf (1:5.32-1) ...
Setting up libgraphite2-3:armhf (1.3.10-6) ...
Setting up libcroco3:armhf (0.6.12-1) ...
Setting up libstdc++-7-dev:armhf (7.2.0-11) ...
Setting up libncurses5-dev:armhf (6.0+20170902-1) ...
Setting up libssl1.0.2:armhf (1.0.2l-2) ...
Setting up pkg-config (0.29-4) ...
Setting up libpixman-1-0:armhf (0.34.0-1) ...
Setting up libblas3:armhf (3.7.1-4) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libssh2-1:armhf (1.8.0-1) ...
Processing triggers for libc-bin (2.24-14) ...
Setting up autotools-dev (20161112.1) ...
Processing triggers for systemd (234-3) ...
Setting up libgfortran-7-dev:armhf (7.2.0-11) ...
Setting up libreadline-dev:armhf (7.0-3) ...
Setting up libexpat1-dev:armhf (2.2.3-1) ...
Setting up libpcrecpp0v5:armhf (2:8.39-4) ...
Setting up libpcre32-3:armhf (2:8.39-4) ...
Setting up icu-devtools (57.1-8) ...
Setting up libpcre16-3:armhf (2:8.39-4) ...
Setting up libtcl8.6:armhf (8.6.7+dfsg-1) ...
Setting up libthai-data (0.1.26-3) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2) ...
Setting up liblzma-dev:armhf (5.2.2-1.3) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libkeyutils1:armhf (1.5.9-9) ...
Setting up bsdmainutils (9.0.14) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up xdg-utils (1.1.1-1) ...
Setting up libx11-data (2:1.6.4-3) ...
Setting up libpython2.7-stdlib:armhf (2.7.14-2) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up autopoint (0.19.8.1-4) ...
Setting up libmpdec2:armhf (2.4.2-1) ...
Setting up libpython3.5-minimal:armhf (3.5.4-4) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-5) ...
Setting up libfile-stripnondeterminism-perl (0.039-1) ...
Setting up libpaper1:armhf (1.1.24+nmu5) ...

Creating config file /etc/papersize with new version
Setting up libpython3.6-stdlib:armhf (3.6.3-1) ...
Setting up libpaper-utils (1.1.24+nmu5) ...
Setting up libpcre3-dev:armhf (2:8.39-4) ...
Setting up fontconfig-config (2.12.3-0.2) ...
Setting up python3.6 (3.6.3-1) ...
Setting up gcc-7 (7.2.0-11) ...
Setting up gettext (0.19.8.1-4) ...
Setting up libblas-dev:armhf (3.7.1-4) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up g++-7 (7.2.0-11) ...
Setting up liblapack3:armhf (3.7.1-4) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libpython3.5-stdlib:armhf (3.5.4-4) ...
Setting up python2.7 (2.7.14-2) ...
Setting up libharfbuzz0b:armhf (1.5.1-1) ...
Setting up autoconf (2.69-11) ...
Setting up libthai0:armhf (0.1.26-3) ...
Setting up libicu-dev (57.1-8) ...
Setting up file (1:5.32-1) ...
Setting up libkrb5support0:armhf (1.15.1-2) ...
Setting up python3.5-minimal (3.5.4-4) ...
Setting up libpython-stdlib:armhf (2.7.14-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up libpython2.7:armhf (2.7.14-2) ...
Setting up automake (1:1.15.1-3) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up man-db (2.7.6.1-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up gfortran-7 (7.2.0-11) ...
Setting up libpython2.7-dev:armhf (2.7.14-2) ...
Setting up libpng-dev:armhf (1.6.34-1) ...
Setting up python2.7-dev (2.7.14-2) ...
Setting up libxcb1:armhf (1.12-1) ...
Setting up python (2.7.14-1) ...
Setting up libpython3.6:armhf (3.6.3-1) ...
Setting up liblapack-dev:armhf (3.7.1-4) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libtool (2.4.6-2) ...
Setting up python3.5 (3.5.4-4) ...
Setting up gfortran (4:7.2.0-1d1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libpython3-stdlib:armhf (3.6.3-1) ...
Setting up libpython-dev:armhf (2.7.14-1) ...
Setting up libfontconfig1:armhf (2.12.3-0.2) ...
Setting up libsm6:armhf (2:1.2.2-1+b3) ...
Setting up libk5crypto3:armhf (1.15.1-2) ...
Setting up libxcb-render0:armhf (1.12-1) ...
Setting up po-debconf (1.0.20) ...
Setting up python-dev (2.7.14-1) ...
Setting up libx11-6:armhf (2:1.6.4-3) ...
Setting up python-pkg-resources (36.2.7-2) ...
Setting up libpython3.6-dev:armhf (3.6.3-1) ...
Setting up libxmuu1:armhf (2:1.1.2-2) ...
Setting up python-numpy (1:1.13.1-1) ...
Setting up libxcb-shm0:armhf (1.12-1) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libkrb5-3:armhf (1.15.1-2) ...
Setting up python-decorator (4.1.2-1) ...
Setting up libxft2:armhf (2.3.2-1+b2) ...
Setting up python3.6-dev (3.6.3-1) ...
Setting up fontconfig (2.12.3-0.2) ...
Regenerating fonts cache... done.
Setting up libpython3-dev:armhf (3.6.3-1) ...
Setting up python-setuptools (36.2.7-2) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up python-scipy (0.19.1-1) ...
Setting up libxss1:armhf (1:1.2.2-1) ...
Setting up libgssapi-krb5-2:armhf (1.15.1-2) ...
Setting up xauth (1:1.0.9-1) ...
Setting up libpango-1.0-0:armhf (1.40.12-1) ...
Setting up libcairo2:armhf (1.14.10-1) ...
Setting up libcurl3:armhf (7.55.1-1) ...
Setting up libtk8.6:armhf (8.6.7-1) ...
Setting up libpangoft2-1.0-0:armhf (1.40.12-1) ...
Setting up libpangocairo-1.0-0:armhf (1.40.12-1) ...
Setting up r-base-core (3.4.2-1) ...

Creating config file /etc/R/Renviron with new version
Setting up r-base-dev (3.4.2-1) ...
Setting up dh-autoreconf (14) ...
Setting up python3 (3.6.3-1) ...
Setting up python3-numpy (1:1.13.1-1) ...
Setting up python3-dev (3.6.3-1) ...
Setting up python3-pkg-resources (36.2.7-2) ...
Setting up dh-strip-nondeterminism (0.039-1) ...
Setting up python3-setuptools (36.2.7-2) ...
Setting up dh-python (2.20170125) ...
Setting up python3-decorator (4.1.2-1) ...
Setting up debhelper (10.9.2) ...
Setting up dh-r (20161219) ...
Setting up python3-scipy (0.19.1-1) ...
Setting up sbuild-build-depends-r-cran-fastcluster-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.24-14) ...
Processing triggers for systemd (234-3) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.4.0-79-generic armhf (armv8l)
Toolchain package versions: binutils_2.29.1-3+rpi1 dpkg-dev_1.18.24 g++-7_7.2.0-11 gcc-7_7.2.0-11 libc6-dev_2.24-14 libstdc++-7-dev_7.2.0-11 libstdc++6_7.2.0-11 linux-libc-dev_4.9.30-2+deb9u2+rpi1+stretch
Package versions: adduser_3.116 apt_1.5 autoconf_2.69-11 automake_1:1.15.1-3 autopoint_0.19.8.1-4 autotools-dev_20161112.1 base-files_10+rpi1 base-passwd_3.5.44 bash_4.4-5 binutils_2.29.1-3+rpi1 binutils-arm-linux-gnueabihf_2.29.1-3+rpi1 binutils-common_2.29.1-3+rpi1 bsdmainutils_9.0.14 bsdutils_1:2.29.2-5 build-essential_12.4 bzip2_1.0.6-8.1 ca-certificates_20170717 cdbs_0.4.156 coreutils_8.26-3 cpio_2.11+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.2.0-11 dash_0.5.8-2.5 dctrl-tools_2.24-2 debconf_1.5.63 debhelper_10.9.2 debianutils_4.8.2 dh-autoreconf_14 dh-python_2.20170125 dh-r_20161219 dh-strip-nondeterminism_0.039-1 diffutils_1:3.6-1 dirmngr_2.2.1-1 dmsetup_2:1.02.142-1 dpkg_1.18.24 dpkg-dev_1.18.24 e2fslibs_1.43.6-1 e2fsprogs_1.43.6-1 fakeroot_1.22-1 fdisk_2.29.2-5 file_1:5.32-1 findutils_4.6.0+git+20170729-2 fontconfig_2.12.3-0.2 fontconfig-config_2.12.3-0.2 fonts-dejavu-core_2.37-1 g++_4:7.2.0-1d1 g++-7_7.2.0-11 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5-base_5.4.1-4 gcc-7_7.2.0-11 gcc-7-base_7.2.0-11 gettext_0.19.8.1-4 gettext-base_0.19.8.1-4 gfortran_4:7.2.0-1d1 gfortran-7_7.2.0-11 gnupg_2.2.1-1 gnupg-agent_2.2.1-1 gnupg-l10n_2.2.1-1 gnupg-utils_2.2.1-1 gpg_2.2.1-1 gpg-agent_2.2.1-1 gpg-wks-client_2.2.1-1 gpg-wks-server_2.2.1-1 gpgconf_2.2.1-1 gpgsm_2.2.1-1 gpgv_2.2.1-1 grep_3.1-2 groff-base_1.22.3-9 gzip_1.6-5 hostname_3.18 icu-devtools_57.1-8 init-system-helpers_1.49 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-9+rpi1 kmod_24-1 libacl1_2.2.52-3 libapparmor1_2.11.0-11 libapt-pkg5.0_1.5 libarchive-zip-perl_1.59-1 libasan4_7.2.0-11 libassuan0_2.4.3-3 libatomic1_7.2.0-11 libattr1_1:2.4.47-2 libaudit-common_1:2.7.7-1 libaudit1_1:2.7.7-1+b1 libbinutils_2.29.1-3+rpi1 libblas-dev_3.7.1-4 libblas3_3.7.1-4 libblkid1_2.29.2-5 libbsd0_0.8.6-2 libbz2-1.0_1.0.6-8.1 libbz2-dev_1.0.6-8.1 libc-bin_2.24-14 libc-dev-bin_2.24-14 libc6_2.24-14 libc6-dev_2.24-14 libcairo2_1.14.10-1 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcc1-0_7.2.0-11 libcilkrts5_7.2.0-11 libcomerr2_1.43.6-1 libcroco3_0.6.12-1 libcryptsetup4_2:1.7.5-1 libcurl3_7.55.1-1 libdatrie1_0.2.10-5 libdb5.3_5.3.28-13.1 libdbus-1-3_1.11.16+really1.10.22-1 libdebconfclient0_0.230 libdevmapper1.02.1_2:1.02.142-1 libdpkg-perl_1.18.24 libdrm-common_2.4.82-1+rpi1 libdrm2_2.4.82-1+rpi1 libexpat1_2.2.3-1 libexpat1-dev_2.2.3-1 libfakeroot_1.22-1 libfdisk1_2.29.2-5 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.039-1 libfontconfig1_2.12.3-0.2 libfreetype6_2.8-0.2 libgcc-7-dev_7.2.0-11 libgcc1_1:7.2.0-11 libgcrypt20_1.7.9-1 libgdbm3_1.8.3-14 libgfortran-7-dev_7.2.0-11 libgfortran4_7.2.0-11 libglib2.0-0_2.54.1-1 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.15-2 libgomp1_7.2.0-11 libgpg-error0_1.27-3 libgraphite2-3_1.3.10-6 libgssapi-krb5-2_1.15.1-2 libharfbuzz0b_1.5.1-1 libhogweed4_3.3-2 libice6_2:1.0.9-2 libicu-dev_57.1-8 libicu57_57.1-8 libidn11_1.33-2 libidn2-0_2.0.2-5 libip4tc0_1.6.1-2 libisl15_0.18-1 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2 libjpeg62-turbo-dev_1:1.5.2-2 libk5crypto3_1.15.1-2 libkeyutils1_1.5.9-9 libklibc_2.0.4-9+rpi1 libkmod2_24-1 libkrb5-3_1.15.1-2 libkrb5support0_1.15.1-2 libksba8_1.3.5-2 liblapack-dev_3.7.1-4 liblapack3_3.7.1-4 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 liblz4-1_0.0~r131-2 liblzma-dev_5.2.2-1.3 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.32-1 libmagic1_1:5.32-1 libmount1_2.29.2-5 libmpc3_1.0.3-2 libmpdec2_2.4.2-1 libmpfr4_3.1.6-1 libncurses5_6.0+20170902-1 libncurses5-dev_6.0+20170902-1 libncursesw5_6.0+20170902-1 libnettle6_3.3-2 libnghttp2-14_1.26.0-1 libnih-dbus1_1.0.3-8 libnih1_1.0.3-8 libnpth0_1.5-2 libp11-kit0_0.23.7-3 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpango-1.0-0_1.40.12-1 libpangocairo-1.0-0_1.40.12-1 libpangoft2-1.0-0_1.40.12-1 libpaper-utils_1.1.24+nmu5 libpaper1_1.1.24+nmu5 libpcre16-3_2:8.39-4 libpcre3_2:8.39-4 libpcre3-dev_2:8.39-4 libpcre32-3_2:8.39-4 libpcrecpp0v5_2:8.39-4 libperl5.24_5.24.1-7 libperl5.26_5.26.0-8 libpipeline1_1.4.2-1 libpixman-1-0_0.34.0-1 libplymouth4_0.9.3-1 libpng-dev_1.6.34-1 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-3 libpsl5_0.18.0-4 libpython-dev_2.7.14-1 libpython-stdlib_2.7.14-1 libpython2.7_2.7.14-2 libpython2.7-dev_2.7.14-2 libpython2.7-minimal_2.7.14-2 libpython2.7-stdlib_2.7.14-2 libpython3-dev_3.6.3-1 libpython3-stdlib_3.6.3-1 libpython3.5-minimal_3.5.4-4 libpython3.5-stdlib_3.5.4-4 libpython3.6_3.6.3-1 libpython3.6-dev_3.6.3-1 libpython3.6-minimal_3.6.3-1 libpython3.6-stdlib_3.6.3-1 libreadline-dev_7.0-3 libreadline5_5.2+dfsg-3 libreadline7_7.0-3 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3 libsasl2-modules_2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3 libseccomp2_2.3.1-2.1 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.11-1 libsm6_2:1.2.2-1+b3 libsmartcols1_2.29.2-5 libsqlite3-0_3.20.1-1 libss2_1.43.6-1 libssh2-1_1.8.0-1 libssl1.0.2_1.0.2l-2 libssl1.1_1.1.0f-5 libstdc++-7-dev_7.2.0-11 libstdc++6_7.2.0-11 libsystemd0_234-3 libtasn1-6_4.12-2.1 libtcl8.6_8.6.7+dfsg-1 libthai-data_0.1.26-3 libthai0_0.1.26-3 libtiff5_4.0.8-5 libtimedate-perl_2.3000-2 libtinfo-dev_6.0+20170902-1 libtinfo5_6.0+20170902-1 libtk8.6_8.6.7-1 libtool_2.4.6-2 libubsan0_7.2.0-11 libudev1_234-3 libunistring2_0.9.7-2 libustr-1.0-1_1.0.4-6 libuuid1_2.29.2-5 libx11-6_2:1.6.4-3 libx11-data_2:1.6.4-3 libxau6_1:1.0.8-1+b2 libxcb-render0_1.12-1 libxcb-shm0_1.12-1 libxcb1_1.12-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-1+b2 libxml2_2.9.4+dfsg1-5 libxmuu1_2:1.1.2-2 libxrender1_1:0.9.10-1 libxss1_1:1.2.2-1 libxt6_1:1.1.5-1 linux-base_4.5 linux-libc-dev_4.9.30-2+deb9u2+rpi1+stretch login_1:4.4-4.1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.7.6.1-2 mawk_1.3.3-17 mime-support_3.60 mount_2.29.2-5 mountall_2.54 multiarch-support_2.24-14 ncurses-base_6.0+20170902-1 ncurses-bin_6.0+20170902-1 openssl_1.1.0f-5 passwd_1:4.4-4.1 patch_2.7.5-1 perl_5.26.0-8 perl-base_5.26.0-8 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.0-8 pinentry-curses_1.0.0-2 pkg-config_0.29-4 plymouth_0.9.3-1 po-debconf_1.0.20 procps_2:3.3.12-3 python_2.7.14-1 python-decorator_4.1.2-1 python-dev_2.7.14-1 python-minimal_2.7.14-1 python-numpy_1:1.13.1-1 python-pkg-resources_36.2.7-2 python-scipy_0.19.1-1 python-setuptools_36.2.7-2 python2.7_2.7.14-2 python2.7-dev_2.7.14-2 python2.7-minimal_2.7.14-2 python3_3.6.3-1 python3-decorator_4.1.2-1 python3-dev_3.6.3-1 python3-minimal_3.6.3-1 python3-numpy_1:1.13.1-1 python3-pkg-resources_36.2.7-2 python3-scipy_0.19.1-1 python3-setuptools_36.2.7-2 python3.5_3.5.4-4 python3.5-minimal_3.5.4-4 python3.6_3.6.3-1 python3.6-dev_3.6.3-1 python3.6-minimal_3.6.3-1 r-base-core_3.4.2-1 r-base-dev_3.4.2-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-fastcluster-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.10 systemd_234-3 sysvinit-utils_2.88dsf-59.10 tar_1.29b-2 tzdata_2017b-2 ucf_3.0036 udev_234-3 unzip_6.0-21 util-linux_2.29.2-5 x11-common_1:7.7+19 xauth_1:1.0.9-1 xdg-utils_1.1.1-1 xz-utils_5.2.2-1.3 zip_3.0-11 zlib1g_1:1.2.8.dfsg-5 zlib1g-dev_1:1.2.8.dfsg-5

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Fri Oct 13 22:33:41 2017 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tillea@rki.de"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-cran-fastcluster_1.1.24-1.dsc
dpkg-source: info: extracting r-cran-fastcluster in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-cran-fastcluster_1.1.24.orig.tar.gz
dpkg-source: info: unpacking r-cran-fastcluster_1.1.24-1.debian.tar.xz

Check disk space
----------------

Sufficient free space for build

Hack binNMU version
-------------------

Created changelog entry for binNMU version 1.1.24-1+b1

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-9bae0f84-4ca2-4f86-80dc-90aeffaadca6
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package r-cran-fastcluster
dpkg-buildpackage: info: source version 1.1.24-1+b1
dpkg-buildpackage: info: source distribution buster-staging
 dpkg-source --before-build r-cran-fastcluster-1.1.24
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
dh clean  --buildsystem R --with python2,python3 --buildsystem=pybuild --sourcedirectory=src/python 
   dh_testdir -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean || true
I: pybuild base:184: python2.7 setup.py clean 
Version: 1.1.24
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
I: pybuild base:184: python3.6 setup.py clean 
Version: 1.1.24
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.6/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.6' does not exist -- can't clean it
# Parts of the following are taken from the CDBS file for F.
if test -d src; then				\
	find src -regex ".*\.o" |               \
        xargs --no-run-if-empty -r rm;          \
	find src src -regex ".*\.so" |          \
	xargs --no-run-if-empty -r rm;		\
fi
rm -f config.log config.status
rm -rf tmp-install
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_autoreconf_clean -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
   dh_clean -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
 debian/rules build-arch
dh build-arch  --buildsystem R --with python2,python3 --buildsystem=pybuild --sourcedirectory=src/python 
   dh_testdir -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
   dh_update_autotools_config -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
   dh_autoreconf -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
   dh_auto_configure -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
I: pybuild base:184: python2.7 setup.py config 
Version: 1.1.24
running config
I: pybuild base:184: python3.6 setup.py config 
Version: 1.1.24
running config
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build
I: pybuild base:184: /usr/bin/python setup.py build 
Version: 1.1.24
running build
running build_py
copying fastcluster.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build
running build_ext
building '_fastcluster' extension
creating build
creating build/temp.linux-armhf-2.7
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c fastcluster_python.cpp -o build/temp.linux-armhf-2.7/fastcluster_python.o
cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
In file included from fastcluster_python.cpp:62:0:
../fastcluster.cpp:54:0: warning: ignoring #pragma STDC FENV_ACCESS [-Wunknown-pragmas]
 #pragma STDC FENV_ACCESS on
 
../fastcluster.cpp:53:118: note: #pragma message: Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.
 #pragma message("Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.")
                                                                                                                      ^
arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/fastcluster_python.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/_fastcluster.so
I: pybuild base:184: /usr/bin/python3 setup.py build 
Version: 1.1.24
running build
running build_py
copying fastcluster.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.6/build
running build_ext
building '_fastcluster' extension
creating build/temp.linux-armhf-3.6
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.6m -c fastcluster_python.cpp -o build/temp.linux-armhf-3.6/fastcluster_python.o
cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
In file included from fastcluster_python.cpp:62:0:
../fastcluster.cpp:54:0: warning: ignoring #pragma STDC FENV_ACCESS [-Wunknown-pragmas]
 #pragma STDC FENV_ACCESS on
 
../fastcluster.cpp:53:118: note: #pragma message: Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.
 #pragma message("Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.")
                                                                                                                      ^
arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.6/fastcluster_python.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.6/build/_fastcluster.cpython-36m-arm-linux-gnueabihf.so
mkdir -p tmp-install
R CMD INSTALL -l tmp-install --clean .
* installing *source* package ‘fastcluster’ ...
** package ‘fastcluster’ successfully unpacked and MD5 sums checked
** libs
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
g++  -I/usr/share/R/include -DNDEBUG      -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-UavZkw/r-base-3.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c fastcluster_R.cpp -o fastcluster_R.o
In file included from fastcluster_R.cpp:36:0:
fastcluster.cpp:53:118: note: #pragma message: Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.
 #pragma message("Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.")
                                                                                                                      ^
g++ -shared -L/usr/lib/R/lib -Wl,-z,relro -o fastcluster.so fastcluster_R.o -L/usr/lib/R/lib -lR
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/tmp-install/fastcluster/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (fastcluster)
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_auto_test -a -O--buildsystem=R -O--buildsystem=pybuild -O--sourcedirectory=src/python
I: pybuild base:184: python2.7 setup.py test 
Version: 1.1.24
running test
running egg_info
creating fastcluster.egg-info
writing requirements to fastcluster.egg-info/requires.txt
writing fastcluster.egg-info/PKG-INFO
writing top-level names to fastcluster.egg-info/top_level.txt
writing dependency_links to fastcluster.egg-info/dependency_links.txt
writing manifest file 'fastcluster.egg-info/SOURCES.txt'
reading manifest file 'fastcluster.egg-info/SOURCES.txt'
writing manifest file 'fastcluster.egg-info/SOURCES.txt'
running build_ext
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/_fastcluster.so -> 
test (tests.fastcluster_test) ... ERROR
test_nan (tests.fastcluster_test) ... ok
test_vector (tests.fastcluster_test) ... ERROR

======================================================================
ERROR: test (tests.fastcluster_test)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/<<PKGBUILDDIR>>/src/python/tests/__init__.py", line 5, in test
    from tests.test import test
  File "/<<PKGBUILDDIR>>/src/python/tests/test.py", line 11, in <module>
    from scipy.spatial.distance import pdist, squareform
  File "/usr/lib/python2.7/dist-packages/scipy/__init__.py", line 114, in <module>
    from scipy._lib._ccallback import LowLevelCallable
  File "/usr/lib/python2.7/dist-packages/scipy/_lib/_ccallback.py", line 1, in <module>
    from . import _ccallback_c
ImportError: /usr/lib/python2.7/dist-packages/scipy/_lib/_ccallback_c.arm-linux-gnueabihf.so: undefined symbol: PyFPE_jbuf

======================================================================
ERROR: test_vector (tests.fastcluster_test)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/<<PKGBUILDDIR>>/src/python/tests/__init__.py", line 13, in test_vector
    from tests.vectortest import test
  File "/<<PKGBUILDDIR>>/src/python/tests/vectortest.py", line 13, in <module>
    from scipy.spatial.distance import pdist, squareform
  File "/usr/lib/python2.7/dist-packages/scipy/__init__.py", line 114, in <module>
    from scipy._lib._ccallback import LowLevelCallable
  File "/usr/lib/python2.7/dist-packages/scipy/_lib/_ccallback.py", line 1, in <module>
    from . import _ccallback_c
ImportError: /usr/lib/python2.7/dist-packages/scipy/_lib/_ccallback_c.arm-linux-gnueabihf.so: undefined symbol: PyFPE_jbuf

----------------------------------------------------------------------
Ran 3 tests in 0.034s

FAILED (errors=2)
Test failed: <unittest.runner.TextTestResult run=3 errors=2 failures=0>

Test program for the 'fastcluster' package.
Copyright:
  * Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
  * All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>

Test program for the 'fastcluster' package.
Copyright:
  * Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
  * All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>

Test program for the 'fastcluster' package.
Copyright:
  * Until package version 1.1.23: (c) 2011 Daniel Müllner <http://danifold.net>
  * All changes from version 1.1.24 on: (c) Google Inc. <http://google.com>
error: Test failed: <unittest.runner.TextTestResult run=3 errors=2 failures=0>
E: pybuild pybuild:283: test: plugin distutils failed with: exit code=1: python2.7 setup.py test 
dh_auto_test: pybuild --test -i python{version} -p 2.7 --dir src/python returned exit code 13
debian/rules:14: recipe for target 'build-arch' failed
make: *** [build-arch] Error 25
dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2
--------------------------------------------------------------------------------
Build finished at 2017-10-28T04:55:52Z

Finished
--------


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 3352
Build-Time: 43
Distribution: buster-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 633
Job: r-cran-fastcluster_1.1.24-1
Machine Architecture: armhf
Package: r-cran-fastcluster
Package-Time: 692
Source-Version: 1.1.24-1
Space: 3352
Status: attempted
Version: 1.1.24-1+b1
--------------------------------------------------------------------------------
Finished at 2017-10-28T04:55:52Z
Build needed 00:11:32, 3352k disk space

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