r-cran-ape →
5.4-1 →
armhf → 2020-06-11 09:07:49
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| r-cran-ape 5.4-1 (armhf) Thu, 11 Jun 2020 08:56:33 +0000 |
+==============================================================================+
Package: r-cran-ape
Version: 5.4-1
Source Version: 5.4-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-80bbb886-7c0e-4684-94f0-51c9ac01ab94' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.7 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.8 MB]
Fetched 24.5 MB in 10s (2387 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'r-cran-ape' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-cran-ape.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-cran-ape.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 806 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main r-cran-ape 5.4-1 (dsc) [2033 B]
Get:2 http://172.17.0.1/private bullseye-staging/main r-cran-ape 5.4-1 (tar) [799 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main r-cran-ape 5.4-1 (diff) [5092 B]
Fetched 806 kB in 0s (3221 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-cran-ape-G5IZML/r-cran-ape-5.4' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-cran-ape-G5IZML' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-uvnclf/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-uvnclf/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-uvnclf/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-uvnclf/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-uvnclf/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-uvnclf/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-uvnclf/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-uvnclf/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (3765 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 38 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-uvnclf/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (52.7 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12233 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev, r-cran-nlme, r-cran-lattice, r-cran-rcpp (>= 0.12.0)
Filtered Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev, r-cran-nlme, r-cran-lattice, r-cran-rcpp (>= 0.12.0)
dpkg-deb: building package 'sbuild-build-depends-r-cran-ape-dummy' in '/<<BUILDDIR>>/resolver-uvnclf/apt_archive/sbuild-build-depends-r-cran-ape-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-r-cran-ape-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-uvnclf/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-uvnclf/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-uvnclf/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-uvnclf/apt_archive ./ Sources [532 B]
Get:5 copy:/<<BUILDDIR>>/resolver-uvnclf/apt_archive ./ Packages [611 B]
Fetched 2476 B in 1s (4324 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install r-cran-ape build dependencies (apt-based resolver)
----------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils bzip2 ca-certificates
cpp-9 dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz
file fontconfig fontconfig-config fonts-dejavu-core g++-9 gcc-10-base gcc-9
gcc-9-base gettext gettext-base gfortran gfortran-9 groff-base icu-devtools
intltool-debian libarchive-zip-perl libasan5 libatomic1 libblas-dev libblas3
libbrotli1 libbsd0 libbz2-1.0 libbz2-dev libcairo2 libcc1-0 libcroco3
libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgcc-9-dev libgcc-s1 libgfortran-9-dev
libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2
libharfbuzz0b libice6 libicu-dev libicu67 libjbig0 libjpeg-dev
libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3
libkrb5support0 liblapack-dev liblapack3 liblzma-dev libmagic-mgc libmagic1
libncurses-dev libncurses5-dev libncurses6 libnghttp2-14 libpango-1.0-0
libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3
libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev
libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16
libpsl5 libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.1
libstdc++-9-dev libstdc++6 libsub-override-perl libswitch-perl libtcl8.6
libthai-data libthai0 libtiff5 libtinfo5 libtk8.6 libtool libubsan1
libuchardet0 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0
libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1
libxss1 libxt6 littler m4 man-db openssl pkg-config po-debconf r-base-core
r-base-dev r-cran-lattice r-cran-littler r-cran-nlme r-cran-pkgkitten
r-cran-rcpp sensible-utils ucf unzip x11-common xauth xdg-utils zip
zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation bzip2-doc gcc-9-locales debtags dh-make gcc-9-doc gettext-doc
libasprintf-dev libgettextpo-dev gfortran-doc gfortran-9-doc libcoarrays-dev
groff liblapack-doc krb5-doc krb5-user icu-doc liblzma-doc ncurses-doc
readline-doc libstdc++-9-doc tcl8.6 tk8.6 libtool-doc gcj-jdk m4-doc
apparmor less www-browser libmail-box-perl elpa-ess r-doc-info | r-doc-pdf
r-mathlib r-base-html texlive-base texlive-latex-base texlive-plain-generic
texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
texlive-latex-recommended texlive-latex-extra texinfo r-cran-getopt
r-cran-inline
Recommended packages:
devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs krb5-locales libgpm2 libpng-tools
publicsuffix libltdl-dev libmail-sendmail-perl r-recommended r-doc-html
libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
x11-xserver-utils
The following packages will be REMOVED:
libgcc1*
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates
dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
gfortran-9 groff-base icu-devtools intltool-debian libarchive-zip-perl
libblas-dev libblas3 libbrotli1 libbsd0 libbz2-dev libcairo2 libcroco3
libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgfortran-9-dev libgfortran5 libglib2.0-0
libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu-dev libicu67
libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblzma-dev
libmagic-mgc libmagic1 libncurses-dev libncurses5-dev libncurses6
libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0 libpcre2-32-0
libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5
libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5 libreadline-dev
librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.1 libsub-override-perl
libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5 libtinfo5 libtk8.6
libtool libuchardet0 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0
libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1
libxss1 libxt6 littler m4 man-db openssl pkg-config po-debconf r-base-core
r-base-dev r-cran-lattice r-cran-littler r-cran-nlme r-cran-pkgkitten
r-cran-rcpp sbuild-build-depends-r-cran-ape-dummy sensible-utils ucf unzip
x11-common xauth xdg-utils zip zlib1g-dev
The following packages will be upgraded:
bzip2 cpp-9 g++-9 gcc-10-base gcc-9 gcc-9-base libasan5 libatomic1
libbz2-1.0 libcc1-0 libgcc-9-dev libgcc-s1 libgomp1 libstdc++-9-dev
libstdc++6 libubsan1
16 upgraded, 138 newly installed, 1 to remove and 22 not upgraded.
Need to get 118 MB of archives.
After this operation, 261 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-uvnclf/apt_archive ./ sbuild-build-depends-r-cran-ape-dummy 0.invalid.0 [896 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.2-1 [318 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libatomic1 armhf 10.1.0-3+rpi1 [8160 B]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libubsan1 armhf 10.1.0-3+rpi1 [115 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libgomp1 armhf 10.1.0-3+rpi1 [83.0 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf gcc-10-base armhf 10.1.0-3+rpi1 [197 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libgcc-s1 armhf 10.1.0-3+rpi1 [36.1 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libcc1-0 armhf 10.1.0-3+rpi1 [31.7 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libstdc++6 armhf 10.1.0-3+rpi1 [408 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.2-1 [1269 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf bzip2 armhf 1.0.8-3 [46.9 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libbz2-1.0 armhf 1.0.8-3 [44.0 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf g++-9 armhf 9.3.0-13+rpi1 [8225 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf gcc-9 armhf 9.3.0-13+rpi1 [7731 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf cpp-9 armhf 9.3.0-13+rpi1 [7464 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libasan5 armhf 9.3.0-13+rpi1 [348 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libstdc++-9-dev armhf 9.3.0-13+rpi1 [1713 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libgcc-9-dev armhf 9.3.0-13+rpi1 [639 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf gcc-9-base armhf 9.3.0-13+rpi1 [197 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libswitch-perl all 2.17-2 [20.5 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0042 [73.9 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-1 [775 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1g-1 [1272 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1g-1 [811 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20200601 [158 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.1 [187 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.8.1-1 [25.2 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.8.1-1 [14.9 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.64.3-1 [1159 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-2 [8286 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-5+b1 [593 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.1 [1012 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf unzip armhf 6.0-25 [152 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-2 [74.6 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-2 [108 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-2 [274 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.1-2 [330 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-4.2 [281 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-4.2 [328 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.9-2 [298 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.9-2 [692 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.14-2 [110 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.14-2 [101 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-6.1 [255 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-7+rpi1+b1 [61.8 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-7+rpi1+b1 [112 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-7+rpi1+b1 [318 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-7+rpi1+b1 [136 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.41.0-2 [61.2 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1.1 [54.2 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.68.0-1 [286 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.1.0-3+rpi1 [231 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-2 [1602 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-4.2 [416 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.4-1+rpi1+b1 [1309 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b2 [36.4 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.44.7-4 [165 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.44.7-4 [52.6 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.44.7-4 [44.9 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libtcl8.6 armhf 8.6.10+dfsg-1 [886 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+20 [252 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libtk8.6 armhf 8.6.10-1 [678 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1+b3 [156 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf r-base-core armhf 4.0.1-1 [24.7 MB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-9-dev armhf 9.3.0-13+rpi1 [278 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf gfortran-9 armhf 9.3.0-13+rpi1 [8108 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:9.2.1-3.1+rpi1 [1440 B]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libblas-dev armhf 3.9.0-2 [113 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.9.0-2 [2981 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2-1 [79.5 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libncurses-dev armhf 6.2-1 [284 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libncurses5-dev armhf 6.2-1 [932 B]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf libreadline-dev armhf 8.0-4 [116 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.34-7 [190 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-32-0 armhf 10.34-7 [181 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-posix2 armhf 10.34-7 [44.7 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-dev armhf 10.34-7 [614 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-12 [234 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-12 [227 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-12 [150 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-12 [564 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf libpng-dev armhf 1.6.37-2 [276 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-3 [28.0 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 67.1-2 [170 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 67.1-2 [9216 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf libxmuu1 armhf 2:1.1.2-2+b3 [23.4 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29.2-1 [61.5 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf r-base-dev all 4.0.1-1 [4480 B]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf dh-r all 20200314 [39.1 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf r-cran-littler armhf 0.3.9-1+b1 [308 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf littler all 0.3.10-1 [14.9 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lattice armhf 0.20-41-1+b1 [1167 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf r-cran-nlme armhf 3.1.147-1+b1 [2221 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgkitten all 0.1.5-2 [23.7 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcpp armhf 1.0.4.6-1+b1 [1907 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up gcc-10-base:armhf (10.1.0-3+rpi1) ...
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Setting up libstdc++6:armhf (10.1.0-3+rpi1) ...
Selecting previously unselected package libuchardet0:armhf.
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Unpacking g++-9 (9.3.0-13+rpi1) over (9.3.0-12+rpi1) ...
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Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up liblapack3:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libncurses-dev:armhf (6.2-1) ...
Setting up libxcb1:armhf (1.14-2) ...
Setting up libpcre2-dev:armhf (10.34-7) ...
Setting up libtool (2.4.6-14) ...
Setting up libxcb-render0:armhf (1.14-2) ...
Setting up libpcre3-dev:armhf (2:8.39-12) ...
Setting up libpng-dev:armhf (1.6.37-2) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up m4 (1.4.18-4) ...
Setting up libxcb-shm0:armhf (1.14-2) ...
Setting up libreadline-dev:armhf (8.0-4) ...
Setting up libthai0:armhf (0.1.28-3) ...
Setting up ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
126 added, 0 removed; done.
Setting up libasan5:armhf (9.3.0-13+rpi1) ...
Setting up libfreetype6:armhf (2.10.1-2) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up liblapack-dev:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-7+rpi1+b1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up ucf (3.0042) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.8.1-1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up libncurses5-dev:armhf (6.2-1) ...
Setting up cpp-9 (9.3.0-13+rpi1) ...
Setting up libcurl4:armhf (7.68.0-1) ...
Setting up libx11-6:armhf (2:1.6.9-2) ...
Setting up libharfbuzz0b:armhf (2.6.4-1+rpi1+b1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libxmuu1:armhf (2:1.1.2-2+b3) ...
Setting up automake (1:1.16.2-1) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libpaper1:armhf (1.1.28) ...
Creating config file /etc/papersize with new version
Setting up gettext (0.19.8.1-10) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up fontconfig-config (2.13.1-4.2) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libpaper-utils (1.1.28) ...
Setting up man-db (2.9.2-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libgcc-9-dev:armhf (9.3.0-13+rpi1) ...
Setting up libxt6:armhf (1:1.1.5-1+b3) ...
Setting up xauth (1:1.0.10-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libfontconfig1:armhf (2.13.1-4.2) ...
Setting up gcc-9 (9.3.0-13+rpi1) ...
Setting up fontconfig (2.13.1-4.2) ...
Regenerating fonts cache... done.
Setting up libxft2:armhf (2.3.2-2) ...
Setting up libstdc++-9-dev:armhf (9.3.0-13+rpi1) ...
Setting up po-debconf (1.0.21) ...
Setting up libtk8.6:armhf (8.6.10-1) ...
Setting up libpango-1.0-0:armhf (1.44.7-4) ...
Setting up libgfortran-9-dev:armhf (9.3.0-13+rpi1) ...
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up g++-9 (9.3.0-13+rpi1) ...
Setting up libpangoft2-1.0-0:armhf (1.44.7-4) ...
Setting up libpangocairo-1.0-0:armhf (1.44.7-4) ...
Setting up gfortran-9 (9.3.0-13+rpi1) ...
Setting up gfortran (4:9.2.1-3.1+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up r-base-core (4.0.1-1) ...
Creating config file /etc/R/Renviron with new version
Setting up r-cran-lattice (0.20-41-1+b1) ...
Setting up r-cran-nlme (3.1.147-1+b1) ...
Setting up r-cran-pkgkitten (0.1.5-2) ...
Setting up r-cran-littler (0.3.9-1+b1) ...
Setting up r-cran-rcpp (1.0.4.6-1+b1) ...
Setting up r-base-dev (4.0.1-1) ...
Setting up littler (0.3.10-1) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (13.1) ...
Setting up dh-r (20200314) ...
Setting up sbuild-build-depends-r-cran-ape-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.30-8+rpi1) ...
Processing triggers for ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-76-generic armhf (armv8l)
Toolchain package versions: binutils_2.34-8+rpi1 dpkg-dev_1.19.7 g++-9_9.3.0-13+rpi1 gcc-9_9.3.0-13+rpi1 libc6-dev_2.30-8+rpi1 libstdc++-9-dev_9.3.0-13+rpi1 libstdc++6_10.1.0-3+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_2.1.4 autoconf_2.69-11.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-8+rpi1 binutils-arm-linux-gnueabihf_2.34-8+rpi1 binutils-common_2.34-8+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.35.1-5 build-essential_12.8 bzip2_1.0.8-3 ca-certificates_20200601 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.3.0-13+rpi1 dash_0.5.10.2-7 dctrl-tools_2.24-3 debconf_1.5.74 debhelper_13.1 debianutils_4.9.1 dh-autoreconf_19 dh-r_20200314 dh-strip-nondeterminism_1.8.1-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.1-5 file_1:5.38-5 findutils_4.7.0-1 fontconfig_2.13.1-4.2 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.3.0-13+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-10-base_10.1.0-3+rpi1 gcc-9_9.3.0-13+rpi1 gcc-9-base_9.3.0-13+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran_4:9.2.1-3.1+rpi1 gfortran-9_9.3.0-13+rpi1 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 icu-devtools_67.1-2 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-3 libacl1_2.2.53-8 libapt-pkg6.0_2.1.4 libarchive-zip-perl_1.68-1 libasan5_9.3.0-13+rpi1 libassuan0_2.5.3-7 libatomic1_10.1.0-3+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.34-8+rpi1 libblas-dev_3.9.0-2 libblas3_3.9.0-2 libblkid1_2.35.1-5 libbrotli1_1.0.7-6.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-3 libbz2-dev_1.0.8-3 libc-bin_2.30-8+rpi1 libc-dev-bin_2.30-8+rpi1 libc6_2.30-8+rpi1 libc6-dev_2.30-8+rpi1 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2.1+b1 libcap2_1:2.34-2 libcap2-bin_1:2.34-2 libcc1-0_10.1.0-3+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.34-8+rpi1 libctf0_2.34-8+rpi1 libcurl4_7.68.0-1 libdatrie1_0.2.12-3+b2 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.252 libdebhelper-perl_13.1 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.35.1-5 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.8.1-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-4.2 libfreetype6_2.10.1-2 libfribidi0_1.0.8-2 libgcc-9-dev_9.3.0-13+rpi1 libgcc-s1_10.1.0-3+rpi1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran-9-dev_9.3.0-13+rpi1 libgfortran5_10.1.0-3+rpi1 libglib2.0-0_2.64.3-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2 libgomp1_10.1.0-3+rpi1 libgpg-error0_1.37-1 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.17-7+rpi1+b1 libharfbuzz0b_2.6.4-1+rpi1+b1 libhogweed5_3.5.1+really3.5.1-2 libice6_2:1.0.9-2 libicu-dev_67.1-2 libicu67_67.1-2 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libk5crypto3_1.17-7+rpi1+b1 libkeyutils1_1.6.1-2 libkrb5-3_1.17-7+rpi1+b1 libkrb5support0_1.17-7+rpi1+b1 libksba8_1.3.5-2 liblapack-dev_3.9.0-2 liblapack3_3.9.0-2 libldap-2.4-2_2.4.50+dfsg-1 libldap-common_2.4.50+dfsg-1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.35.1-5 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses-dev_6.2-1 libncurses5-dev_6.2-1 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.41.0-2 libnpth0_1.6-1 libp11-kit0_0.23.20-1 libpam-cap_1:2.34-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpango-1.0-0_1.44.7-4 libpangocairo-1.0-0_1.44.7-4 libpangoft2-1.0-0_1.44.7-4 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre16-3_2:8.39-12 libpcre2-16-0_10.34-7 libpcre2-32-0_10.34-7 libpcre2-8-0_10.34-7 libpcre2-dev_10.34-7 libpcre2-posix2_10.34-7 libpcre3_2:8.39-12 libpcre3-dev_2:8.39-12 libpcre32-3_2:8.39-12 libpcrecpp0v5_2:8.39-12 libperl5.30_5.30.0-10 libpipeline1_1.5.2-2 libpixman-1-0_0.36.0-1 libpng-dev_1.6.37-2 libpng16-16_1.6.37-2 libpsl5_0.21.0-1.1 libreadline-dev_8.0-4 libreadline7_7.0-5 libreadline8_8.0-4 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.0-1+b1 libsemanage-common_3.0-1 libsemanage1_3.0-1+b1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.35.1-5 libsqlite3-0_3.31.1-5 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1g-1 libstdc++-9-dev_9.3.0-13+rpi1 libstdc++6_10.1.0-3+rpi1 libsub-override-perl_0.09-2 libswitch-perl_2.17-2 libsystemd0_245.5-3+rpi1 libtasn1-6_4.16.0-2 libtcl8.6_8.6.10+dfsg-1 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0+git191117-2 libtinfo5_6.2-1 libtinfo6_6.2-1 libtk8.6_8.6.10-1 libtool_2.4.6-14 libubsan1_10.1.0-3+rpi1 libuchardet0_0.0.7-1 libudev1_245.5-3+rpi1 libunistring2_0.9.10-2 libuuid1_2.35.1-5 libwebp6_0.6.1-2 libx11-6_2:1.6.9-2 libx11-data_2:1.6.9-2 libxau6_1:1.0.8-1+b2 libxcb-render0_1.14-2 libxcb-shm0_1.14-2 libxcb1_1.14-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-2 libxml2_2.9.10+dfsg-5+b1 libxmuu1_2:1.1.2-2+b3 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.1.5-1+b3 libzstd1_1.4.4+dfsg-3+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 littler_0.3.10-1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-2 man-db_2.9.2-1 mawk_1.3.4.20200120-2 mount_2.35.1-5 ncurses-base_6.2-1 ncurses-bin_6.2-1 netbase_6.1 openssl_1.1.1g-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-10 perl-base_5.30.0-10 perl-modules-5.30_5.30.0-10 pinentry-curses_1.1.0-4 pkg-config_0.29.2-1 po-debconf_1.0.21 r-base-core_4.0.1-1 r-base-dev_4.0.1-1 r-cran-lattice_0.20-41-1+b1 r-cran-littler_0.3.9-1+b1 r-cran-nlme_3.1.147-1+b1 r-cran-pkgkitten_0.1.5-2 r-cran-rcpp_1.0.4.6-1+b1 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-ape-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0042 unzip_6.0-25 util-linux_2.35.1-5 x11-common_1:7.7+20 xauth_1:1.0.10-1 xdg-utils_1.1.3-2 xz-utils_5.2.4-1 zip_3.0-11 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Fri Jun 5 05:29:38 2020 UTC
gpgv: using RSA key 9A3C07BD06DE2F416E813A5D612EF1613E050F54
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-cran-ape_5.4-1.dsc
dpkg-source: info: extracting r-cran-ape in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-cran-ape_5.4.orig.tar.gz
dpkg-source: info: unpacking r-cran-ape_5.4-1.debian.tar.xz
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-80bbb886-7c0e-4684-94f0-51c9ac01ab94
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package r-cran-ape
dpkg-buildpackage: info: source version 5.4-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --buildsystem R
dh_auto_clean -O--buildsystem=R
dh_autoreconf_clean -O--buildsystem=R
dh_clean -O--buildsystem=R
debian/rules binary-arch
dh binary-arch --buildsystem R
dh_update_autotools_config -a -O--buildsystem=R
dh_autoreconf -a -O--buildsystem=R
dh_auto_configure -a -O--buildsystem=R
dh_auto_build -a -O--buildsystem=R
dh_auto_test -a -O--buildsystem=R
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=R
dh_prep -a -O--buildsystem=R
dh_auto_install -a -O--buildsystem=R
I: R packages needed for DEP8:
I: R Package: ape Version: 5.4
I: Building using R version 4.0.1-1
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Fri, 05 Jun 2020 07:19:35 +0200
mkdir -p /<<PKGBUILDDIR>>/debian/r-cran-ape/usr/lib/R/site-library
R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-cran-ape/usr/lib/R/site-library --clean . "--built-timestamp='Fri, 05 Jun 2020 07:19:35 +0200'"
* installing *source* package 'ape' ...
** package 'ape' successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c BIONJ.c -o BIONJ.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c NNI.c -o NNI.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c SPR.c -o SPR.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c additive.c -o additive.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ape.c -o ape.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bNNI.c -o bNNI.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bionjs.c -o bionjs.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bipartition.c -o bipartition.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bitsplits.c -o bitsplits.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c delta_plot.c -o delta_plot.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dist_dna.c -o dist_dna.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dist_nodes.c -o dist_nodes.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ewLasso.c -o ewLasso.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c heap.c -o heap.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c mat_expo.c -o mat_expo.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c me.c -o me.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c me_balanced.c -o me_balanced.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c me_ols.c -o me_ols.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c mvr.c -o mvr.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c mvrs.c -o mvrs.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nj.c -o nj.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c njs.c -o njs.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pic.c -o pic.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c plot_phylo.c -o plot_phylo.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c prop_part.cpp -o prop_part.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rTrait.c -o rTrait.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c read_dna.c -o read_dna.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c reorder_Rcpp.cpp -o reorder_Rcpp.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c reorder_phylo.c -o reorder_phylo.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c treePop.c -o treePop.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tree_build.c -o tree_build.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tree_phylo.c -o tree_phylo.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c triangMtd.c -o triangMtd.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c triangMtds.c -o triangMtds.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-9DXUTT/r-base-4.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ultrametric.c -o ultrametric.o
g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-z,relro -o ape.so BIONJ.o NNI.o RcppExports.o SPR.o additive.o ape.o bNNI.o bionjs.o bipartition.o bitsplits.o delta_plot.o dist_dna.o dist_nodes.o ewLasso.o heap.o mat_expo.o me.o me_balanced.o me_ols.o mvr.o mvrs.o nj.o njs.o pic.o plot_phylo.o prop_part.o rTrait.o read_dna.o reorder_Rcpp.o reorder_phylo.o treePop.o tree_build.o tree_phylo.o triangMtd.o triangMtds.o ultrametric.o -llapack -lblas -lgfortran -lm -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-cran-ape/usr/lib/R/site-library/00LOCK-r-cran-ape-5.4/00new/ape/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ape)
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 292.
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 293.
Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 296.
W: Ignoring specified R dependency: R (>= 3.2.0)
I: Using r-cran-gee for Suggests:gee
I: Using r-cran-expm for Suggests:expm
I: Using r-cran-igraph for Suggests:igraph
I: Using r-cran-nlme for Imports:nlme
I: Using r-cran-lattice for Imports:lattice
I: Using r-cran-rcpp for Imports:Rcpp (>= 0.12.0)
I: Using r-cran-rcpp for LinkingTo:Rcpp
dh_installdocs -a -O--buildsystem=R
dh_installchangelogs -a -O--buildsystem=R
dh_installexamples -a -O--buildsystem=R
dh_installinit -a -O--buildsystem=R
dh_installsystemduser -a -O--buildsystem=R
dh_perl -a -O--buildsystem=R
dh_link -a -O--buildsystem=R
dh_strip_nondeterminism -a -O--buildsystem=R
dh_compress -a -O--buildsystem=R
dh_fixperms -a -O--buildsystem=R
dh_missing -a -O--buildsystem=R
dh_dwz -a -O--buildsystem=R
dh_strip -a -O--buildsystem=R
dh_makeshlibs -a -O--buildsystem=R
dh_shlibdeps -a -O--buildsystem=R
dh_installdeb -a -O--buildsystem=R
dh_gencontrol -a -O--buildsystem=R
dh_md5sums -a -O--buildsystem=R
dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-cran-ape' in '../r-cran-ape_5.4-1_armhf.deb'.
dpkg-deb: building package 'r-cran-ape-dbgsym' in '../r-cran-ape-dbgsym_5.4-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../r-cran-ape_5.4-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-06-11T09:07:45Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
r-cran-ape_5.4-1_armhf.changes:
-------------------------------
Format: 1.8
Date: Fri, 05 Jun 2020 07:19:35 +0200
Source: r-cran-ape
Binary: r-cran-ape r-cran-ape-dbgsym
Architecture: armhf
Version: 5.4-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Dylan Aïssi <daissi@debian.org>
Description:
r-cran-ape - GNU R package for Analyses of Phylogenetics and Evolution
Changes:
r-cran-ape (5.4-1) unstable; urgency=medium
.
* New upstream version
* Standards-Version: 4.5.0 (routine-update)
* debhelper-compat 12 (routine-update)
* Testsuite: autopkgtest-pkg-r (routine-update)
* autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
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Files:
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+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
r-cran-ape-dbgsym_5.4-1_armhf.deb
---------------------------------
new Debian package, version 2.0.
size 646552 bytes: control archive=532 bytes.
372 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: r-cran-ape-dbgsym
Source: r-cran-ape
Version: 5.4-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 671
Depends: r-cran-ape (= 5.4-1)
Section: debug
Priority: optional
Description: debug symbols for r-cran-ape
Build-Ids: 7d456c99fb7968f0f8d43b49cb499e9b8941d3aa
drwxr-xr-x root/root 0 2020-06-05 05:19 ./
drwxr-xr-x root/root 0 2020-06-05 05:19 ./usr/
drwxr-xr-x root/root 0 2020-06-05 05:19 ./usr/lib/
drwxr-xr-x root/root 0 2020-06-05 05:19 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-06-05 05:19 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-06-05 05:19 ./usr/lib/debug/.build-id/7d/
-rw-r--r-- root/root 676564 2020-06-05 05:19 ./usr/lib/debug/.build-id/7d/456c99fb7968f0f8d43b49cb499e9b8941d3aa.debug
drwxr-xr-x root/root 0 2020-06-05 05:19 ./usr/share/
drwxr-xr-x root/root 0 2020-06-05 05:19 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-06-05 05:19 ./usr/share/doc/r-cran-ape-dbgsym -> r-cran-ape
r-cran-ape_5.4-1_armhf.deb
--------------------------
new Debian package, version 2.0.
size 2191064 bytes: control archive=2580 bytes.
1639 bytes, 27 lines control
3842 bytes, 50 lines md5sums
Package: r-cran-ape
Version: 5.4-1
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 2453
Depends: r-base-core (>= 4.0.1-1), r-api-4.0, r-cran-nlme, r-cran-lattice, r-cran-rcpp (>= 0.12.0), libc6 (>= 2.29), libgcc-s1 (>= 3.5), liblapack3 | liblapack.so.3, libstdc++6 (>= 5.2)
Suggests: r-cran-gee, r-cran-expm, r-cran-igraph, clustalw, muscle, phyml, t-coffee
Section: gnu-r
Priority: optional
Homepage: https://cran.r-project.org/package=ape
Description: GNU R package for Analyses of Phylogenetics and Evolution
This package provides functions for reading, writing, plotting, and
manipulating phylogenetic trees, analyses of comparative data in a
phylogenetic framework, ancestral character analyses, analyses of
diversification and macroevolution, computing distances from DNA
sequences, reading and writing nucleotide sequences as well as
importing from BioConductor, and several tools such as Mantel's test,
generalized skyline plots, graphical exploration of phylogenetic data
(alex, trex, kronoviz), estimation of absolute evolutionary rates and
clock-like trees using mean path lengths and penalized likelihood,
dating trees with non-contemporaneous sequences, translating DNA into
AA sequences, and assessing sequence alignments. Phylogeny estimation
can be done with the NJ, BIONJ, ME, MVR, SDM, and triangle methods,
and several methods handling incomplete distance matrices (NJ*,
BIONJ*, MVR*, and the corresponding triangle method). Some functions
call external applications (PhyML, Clustal, T-Coffee, Muscle) whose
results are returned into R.
drwxr-xr-x root/root 0 2020-06-05 05:19 ./
drwxr-xr-x root/root 0 2020-06-05 05:19 ./usr/
drwxr-xr-x root/root 0 2020-06-05 05:19 ./usr/lib/
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drwxr-xr-x root/root 0 2020-06-05 05:19 ./usr/lib/R/site-library/
drwxr-xr-x root/root 0 2020-06-05 05:19 ./usr/lib/R/site-library/ape/
-rw-r--r-- root/root 654 2020-06-05 05:19 ./usr/lib/R/site-library/ape/CITATION
-rw-r--r-- root/root 5854 2020-06-05 05:19 ./usr/lib/R/site-library/ape/DESCRIPTION
-rw-r--r-- root/root 11671 2020-06-05 05:19 ./usr/lib/R/site-library/ape/INDEX
drwxr-xr-x root/root 0 2020-06-05 05:19 ./usr/lib/R/site-library/ape/Meta/
-rw-r--r-- root/root 8062 2020-06-05 05:19 ./usr/lib/R/site-library/ape/Meta/Rd.rds
-rw-r--r-- root/root 483 2020-06-05 05:19 ./usr/lib/R/site-library/ape/Meta/data.rds
-rw-r--r-- root/root 132 2020-06-05 05:19 ./usr/lib/R/site-library/ape/Meta/features.rds
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-rw-r--r-- root/root 4314 2020-06-05 05:19 ./usr/lib/R/site-library/ape/Meta/links.rds
-rw-r--r-- root/root 3782 2020-06-05 05:19 ./usr/lib/R/site-library/ape/Meta/nsInfo.rds
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-rw-r--r-- root/root 11182 2020-06-05 05:19 ./usr/lib/R/site-library/ape/NAMESPACE
-rw-r--r-- root/root 37 2020-06-05 05:19 ./usr/lib/R/site-library/ape/NEWS
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-rw-r--r-- root/root 1056 2020-06-05 05:19 ./usr/lib/R/site-library/ape/R/ape
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-rw-r--r-- root/root 6514 2020-06-05 05:19 ./usr/lib/R/site-library/ape/R/ape.rdx
drwxr-xr-x root/root 0 2020-06-05 05:19 ./usr/lib/R/site-library/ape/data/
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-rw-r--r-- root/root 2509 2020-06-05 05:19 ./usr/lib/R/site-library/ape/data/bird.families.rda
-rw-r--r-- root/root 567 2020-06-05 05:19 ./usr/lib/R/site-library/ape/data/bird.orders.rda
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+------------------------------------------------------------------------------+
| Post Build |
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| Cleanup |
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
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| Summary |
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Build Architecture: armhf
Build-Space: 8792
Build-Time: 180
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 469
Job: r-cran-ape_5.4-1
Machine Architecture: armhf
Package: r-cran-ape
Package-Time: 672
Source-Version: 5.4-1
Space: 8792
Status: successful
Version: 5.4-1
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Finished at 2020-06-11T09:07:45Z
Build needed 00:11:12, 8792k disk space