r-bioc-titancna →
1.28.0-1 →
armhf → 2020-11-24 23:43:59
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| r-bioc-titancna 1.28.0-1 (armhf) Tue, 24 Nov 2020 23:20:35 +0000 |
+==============================================================================+
Package: r-bioc-titancna
Version: 1.28.0-1
Source Version: 1.28.0-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-b161ff62-e1a5-4676-8d78-983774c95e72' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.9 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.9 MB]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'r-bioc-titancna' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-bioc-titancna.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-bioc-titancna.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 3913 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main r-bioc-titancna 1.28.0-1 (dsc) [2311 B]
Get:2 http://172.17.0.1/private bullseye-staging/main r-bioc-titancna 1.28.0-1 (tar) [3909 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main r-bioc-titancna 1.28.0-1 (diff) [2116 B]
Fetched 3913 kB in 1s (5037 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-bioc-titancna-gDJO9A/r-bioc-titancna-1.28.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-bioc-titancna-gDJO9A' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-o7lQR6/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-o7lQR6/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-o7lQR6/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-o7lQR6/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-o7lQR6/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-o7lQR6/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-o7lQR6/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-o7lQR6/apt_archive ./ Packages [433 B]
Fetched 2109 B in 0s (9288 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils libpam-cap netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 22 not upgraded.
Need to get 856 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-o7lQR6/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 856 B in 0s (66.9 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12594 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev, r-bioc-biocgenerics (>= 0.31.6), r-bioc-iranges (>= 2.6.1), r-bioc-genomicranges (>= 1.24.3), r-bioc-variantannotation (>= 1.18.7), r-cran-foreach (>= 1.4.3), r-bioc-genomeinfodb (>= 1.8.7), r-cran-data.table (>= 1.10.4), r-cran-dplyr
Filtered Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev, r-bioc-biocgenerics (>= 0.31.6), r-bioc-iranges (>= 2.6.1), r-bioc-genomicranges (>= 1.24.3), r-bioc-variantannotation (>= 1.18.7), r-cran-foreach (>= 1.4.3), r-bioc-genomeinfodb (>= 1.8.7), r-cran-data.table (>= 1.10.4), r-cran-dplyr
dpkg-deb: building package 'sbuild-build-depends-r-bioc-titancna-dummy' in '/<<BUILDDIR>>/resolver-o7lQR6/apt_archive/sbuild-build-depends-r-bioc-titancna-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-r-bioc-titancna-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-o7lQR6/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-o7lQR6/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-o7lQR6/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-o7lQR6/apt_archive ./ Sources [614 B]
Get:5 copy:/<<BUILDDIR>>/resolver-o7lQR6/apt_archive ./ Packages [694 B]
Fetched 2641 B in 0s (11.6 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install r-bioc-titancna build dependencies (apt-based resolver)
---------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev ca-certificates dctrl-tools
debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
gfortran-10 groff-base icu-devtools intltool-debian libalgorithm-c3-perl
libarchive-zip-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl
libblas-dev libblas3 libboost-dev libboost1.71-dev libbrotli1 libbsd0
libbz2-dev libcairo2 libclass-c3-perl libclass-load-perl
libclass-load-xs-perl libcroco3 libcurl3-gnutls libcurl4
libdata-optlist-perl libdatrie1 libdebhelper-perl libdevel-callchecker-perl
libdevel-globaldestruction-perl libdevel-overloadinfo-perl
libdevel-stacktrace-perl libdist-checkconflicts-perl
libdynaloader-functions-perl libelf1 libencode-locale-perl
libeval-closure-perl libexpat1 libfile-stripnondeterminism-perl
libfile-which-perl libfontconfig1 libfreetype6 libfribidi0
libgfortran-10-dev libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi-krb5-2
libharfbuzz0b libhttp-date-perl libhttp-message-perl libice6 libicu-dev
libicu67 libio-html-perl libjbig0 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev libjs-jquery libk5crypto3 libkeyutils1 libkrb5-3
libkrb5support0 liblapack-dev liblapack3 liblwp-mediatypes-perl liblzma-dev
libmagic-mgc libmagic1 libmodule-implementation-perl
libmodule-runtime-conflicts-perl libmodule-runtime-perl libmoose-perl
libmro-compat-perl libnamespace-clean-perl libncurses-dev libncurses5-dev
libncurses6 libnghttp2-14 libpackage-deprecationmanager-perl
libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0
libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1
libparams-classify-perl libparams-util-perl libpcre16-3 libpcre2-16-0
libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5
libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.1
libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl
libsub-install-perl libsub-name-perl libsub-override-perl libswitch-perl
libtcl8.6 libthai-data libthai0 libtiff5 libtimedate-perl libtk8.6 libtool
libtry-tiny-perl libuchardet0 liburi-perl libvariable-magic-perl libwebp6
libwww-curl-perl libwww-curl-simple-perl libx11-6 libx11-data libxau6
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxmuu1 libxrender1 libxss1 libxt6 littler m4 man-db node-html5shiv
node-jquery openssl pkg-config po-debconf r-base-core r-base-dev
r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics
r-bioc-biocparallel r-bioc-biomart r-bioc-biostrings r-bioc-bsgenome
r-bioc-delayedarray r-bioc-genomeinfodb r-bioc-genomeinfodbdata
r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges
r-bioc-iranges r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools
r-bioc-rtracklayer r-bioc-s4vectors r-bioc-summarizedexperiment
r-bioc-variantannotation r-bioc-xvector r-bioc-zlibbioc r-cran-askpass
r-cran-assertthat r-cran-bh r-cran-bit r-cran-bit64 r-cran-bitops
r-cran-blob r-cran-cli r-cran-codetools r-cran-crayon r-cran-curl
r-cran-data.table r-cran-dbi r-cran-dbplyr r-cran-digest r-cran-dplyr
r-cran-ellipsis r-cran-fansi r-cran-foreach r-cran-formatr
r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue
r-cran-hms r-cran-httr r-cran-iterators r-cran-jsonlite r-cran-lambda.r
r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix
r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar
r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-prettyunits
r-cran-progress r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcpp
r-cran-rcurl r-cran-rlang r-cran-rsqlite r-cran-snow r-cran-stringi
r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyselect r-cran-utf8
r-cran-vctrs r-cran-xml r-cran-xml2 ucf unzip x11-common xauth xdg-utils zip
zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc debtags dh-make gettext-doc
libasprintf-dev libgettextpo-dev gfortran-doc gfortran-10-doc
libcoarrays-dev groff liblapack-doc libboost-doc libboost1.71-doc
libboost-atomic1.71-dev libboost-chrono1.71-dev libboost-container1.71-dev
libboost-context1.71-dev libboost-contract1.71-dev
libboost-coroutine1.71-dev libboost-date-time1.71-dev
libboost-exception1.71-dev libboost-fiber1.71-dev
libboost-filesystem1.71-dev libboost-graph1.71-dev
libboost-graph-parallel1.71-dev libboost-iostreams1.71-dev
libboost-locale1.71-dev libboost-log1.71-dev libboost-math1.71-dev
libboost-mpi1.71-dev libboost-mpi-python1.71-dev libboost-numpy1.71-dev
libboost-program-options1.71-dev libboost-python1.71-dev
libboost-random1.71-dev libboost-regex1.71-dev
libboost-serialization1.71-dev libboost-stacktrace1.71-dev
libboost-system1.71-dev libboost-test1.71-dev libboost-thread1.71-dev
libboost-timer1.71-dev libboost-type-erasure1.71-dev libboost-wave1.71-dev
libboost1.71-tools-dev libmpfrc++-dev libntl-dev krb5-doc krb5-user icu-doc
liblzma-doc ncurses-doc libscalar-number-perl readline-doc tcl8.6 tk8.6
libtool-doc gcj-jdk libwww-perl libcurl4-gnutls-dev m4-doc apparmor less
www-browser nodejs libmail-box-perl elpa-ess r-doc-info | r-doc-pdf
r-mathlib r-base-html texlive-base texlive-latex-base texlive-plain-generic
texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
texlive-latex-recommended texlive-latex-extra texinfo r-bioc-org.hs.eg.db
r-bioc-graph r-bioc-biocstyle r-cran-knitr r-bioc-all r-cran-rmarkdown
r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-bbmisc r-bioc-shortread
r-cran-testthat r-cran-biocmanager r-cran-runit r-bioc-edger
r-bioc-ensembldb r-bioc-gviz r-bioc-annotationhub r-bioc-dexseq
r-bioc-delayedmatrixstats r-bioc-genefilter r-bioc-limma r-bioc-hdf5array
r-bioc-rhdf5 r-cran-ggplot2 r-cran-covr r-cran-roxygen2 r-cran-callr
r-cran-htmlwidgets r-cran-ps r-cran-rstudioapi r-cran-prettycode
r-cran-r.utils r-cran-xts r-cran-zoo r-cran-yaml r-cran-rmysql r-cran-broom
r-cran-rpostgresql r-cran-unitizer r-cran-shiny r-cran-forcats r-cran-withr
r-cran-lubridate r-cran-httpuv r-cran-jpeg r-cran-png r-cran-readr
r-cran-plyr r-cran-sf r-cran-getopt r-cran-base64enc r-cran-scales
r-cran-inline r-cran-rmpi r-cran-rsprng r-cran-rlecuyer r-cran-evaluate
r-cran-formattable r-cran-htmltools r-cran-tidyr r-cran-zeallot
Recommended packages:
devscripts curl | wget | lynx bzip2-doc libclass-c3-xs-perl
libdevel-lexalias-perl libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libclone-perl javascript-common krb5-locales
libdevel-partialdump-perl libgpm2 libpng-tools publicsuffix libltdl-dev
libmail-sendmail-perl r-recommended r-doc-html r-bioc-go.db r-cran-runit
r-cran-testthat r-cran-batchjobs r-cran-doparallel r-cran-batchtools
r-cran-rmpi r-bioc-biovizbase r-bioc-genefilter r-bioc-shortread
r-bioc-annotate r-bioc-snpstats r-cran-withr r-cran-mockery r-cran-httpuv
r-cran-webutils r-cran-rmysql r-cran-rpostgresql r-cran-mass r-cran-testit
r-cran-survival r-cran-pkgload r-cran-sp r-cran-sodium r-cran-lubridate
r-cran-rmarkdown r-cran-dbitest r-cran-htmltools r-cran-htmlwidgets
r-cran-knitr r-cran-mockr r-cran-waldo libfile-mimeinfo-perl
libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev ca-certificates dctrl-tools
debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
gfortran-10 groff-base icu-devtools intltool-debian libalgorithm-c3-perl
libarchive-zip-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl
libblas-dev libblas3 libboost-dev libboost1.71-dev libbrotli1 libbsd0
libbz2-dev libcairo2 libclass-c3-perl libclass-load-perl
libclass-load-xs-perl libcroco3 libcurl3-gnutls libcurl4
libdata-optlist-perl libdatrie1 libdebhelper-perl libdevel-callchecker-perl
libdevel-globaldestruction-perl libdevel-overloadinfo-perl
libdevel-stacktrace-perl libdist-checkconflicts-perl
libdynaloader-functions-perl libelf1 libencode-locale-perl
libeval-closure-perl libexpat1 libfile-stripnondeterminism-perl
libfile-which-perl libfontconfig1 libfreetype6 libfribidi0
libgfortran-10-dev libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi-krb5-2
libharfbuzz0b libhttp-date-perl libhttp-message-perl libice6 libicu-dev
libicu67 libio-html-perl libjbig0 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev libjs-jquery libk5crypto3 libkeyutils1 libkrb5-3
libkrb5support0 liblapack-dev liblapack3 liblwp-mediatypes-perl liblzma-dev
libmagic-mgc libmagic1 libmodule-implementation-perl
libmodule-runtime-conflicts-perl libmodule-runtime-perl libmoose-perl
libmro-compat-perl libnamespace-clean-perl libncurses-dev libncurses5-dev
libncurses6 libnghttp2-14 libpackage-deprecationmanager-perl
libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0
libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1
libparams-classify-perl libparams-util-perl libpcre16-3 libpcre2-16-0
libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5
libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.1
libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl
libsub-install-perl libsub-name-perl libsub-override-perl libswitch-perl
libtcl8.6 libthai-data libthai0 libtiff5 libtimedate-perl libtk8.6 libtool
libtry-tiny-perl libuchardet0 liburi-perl libvariable-magic-perl libwebp6
libwww-curl-perl libwww-curl-simple-perl libx11-6 libx11-data libxau6
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxmuu1 libxrender1 libxss1 libxt6 littler m4 man-db node-html5shiv
node-jquery openssl pkg-config po-debconf r-base-core r-base-dev
r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics
r-bioc-biocparallel r-bioc-biomart r-bioc-biostrings r-bioc-bsgenome
r-bioc-delayedarray r-bioc-genomeinfodb r-bioc-genomeinfodbdata
r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges
r-bioc-iranges r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools
r-bioc-rtracklayer r-bioc-s4vectors r-bioc-summarizedexperiment
r-bioc-variantannotation r-bioc-xvector r-bioc-zlibbioc r-cran-askpass
r-cran-assertthat r-cran-bh r-cran-bit r-cran-bit64 r-cran-bitops
r-cran-blob r-cran-cli r-cran-codetools r-cran-crayon r-cran-curl
r-cran-data.table r-cran-dbi r-cran-dbplyr r-cran-digest r-cran-dplyr
r-cran-ellipsis r-cran-fansi r-cran-foreach r-cran-formatr
r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue
r-cran-hms r-cran-httr r-cran-iterators r-cran-jsonlite r-cran-lambda.r
r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix
r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar
r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-prettyunits
r-cran-progress r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcpp
r-cran-rcurl r-cran-rlang r-cran-rsqlite r-cran-snow r-cran-stringi
r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyselect r-cran-utf8
r-cran-vctrs r-cran-xml r-cran-xml2
sbuild-build-depends-r-bioc-titancna-dummy ucf unzip x11-common xauth
xdg-utils zip zlib1g-dev
0 upgraded, 262 newly installed, 0 to remove and 22 not upgraded.
Need to get 245 MB of archives.
After this operation, 739 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-o7lQR6/apt_archive ./ sbuild-build-depends-r-bioc-titancna-dummy 0.invalid.0 [980 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libswitch-perl all 2.17-2 [20.5 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-4 [801 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1h-1 [1271 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1h-1 [812 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20200601 [158 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.2.1 [188 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.182-1 [162 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.3-1 [1176 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-4 [8289 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.2 [578 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.2.1 [1007 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf unzip armhf 6.0-25 [152 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-2 [74.6 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-3 [108 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.10-1 [73.3 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.9-2 [259 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-3 [276 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.2+dfsg-4 [345 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-4.2 [281 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-4.2 [328 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.12-1 [311 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.12-1 [700 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.14-2 [110 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.14-2 [101 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-10+b3 [62.0 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-10+b3 [112 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-10+b3 [318 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-10+b3 [135 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.41.0-3 [63.0 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1.1 [54.2 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.72.0-1 [300 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:2.0.5-1.1 [121 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.2.0-16+rpi1 [232 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-3 [1597 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-4.2 [416 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.7-1 [1366 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b5 [36.5 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.46.2-3 [172 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.46.2-3 [55.7 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.46.2-3 [46.7 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libtcl8.6 armhf 8.6.10+dfsg-1 [886 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+21 [252 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libtk8.6 armhf 8.6.10-1 [678 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.10-1 [51.7 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.2.0-1 [159 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf r-base-core armhf 4.0.3-1 [24.7 MB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-10-dev armhf 10.2.0-16+rpi1 [278 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf gfortran-10 armhf 10.2.0-16+rpi1 [56.1 MB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:10.2.0-1+rpi1 [1428 B]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libblas-dev armhf 3.9.0-3 [113 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.9.0-3 [2980 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2+20200918-1 [79.5 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libncurses-dev armhf 6.2+20200918-1 [290 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libncurses5-dev armhf 6.2+20200918-1 [940 B]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libreadline-dev armhf 8.1~rc2-2 [121 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:2.0.5-1.1 [241 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:2.0.5-1.1 [66.0 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.34-7 [190 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-32-0 armhf 10.34-7 [181 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-posix2 armhf 10.34-7 [44.7 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-dev armhf 10.34-7 [614 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-13 [235 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-13 [228 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-13 [150 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-13 [566 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf libpng-dev armhf 1.6.37-3 [277 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-4 [28.0 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 67.1-4 [172 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 67.1-4 [9248 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libxmuu1 armhf 2:1.1.2-2+b3 [23.4 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29.2-1 [61.5 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf r-base-dev all 4.0.3-1 [4484 B]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libencode-locale-perl all 1.05-1 [13.7 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libtimedate-perl all 2.3300-1 [39.2 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libhttp-date-perl all 6.05-1 [10.4 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libio-html-perl all 1.001-1 [17.6 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf liblwp-mediatypes-perl all 6.04-1 [19.9 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf liburi-perl all 5.05-1 [90.3 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf libhttp-message-perl all 6.26-1 [79.4 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libparams-util-perl armhf 1.102-1+b1 [24.6 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libsub-install-perl all 0.928-1 [11.4 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf libdata-optlist-perl all 0.110-1 [10.6 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf libb-hooks-op-check-perl armhf 0.22-1+b4 [11.0 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libdynaloader-functions-perl all 0.003-1 [12.6 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libdevel-callchecker-perl armhf 0.008-1+b2 [15.7 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf libparams-classify-perl armhf 0.015-1+b3 [24.6 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf libmodule-runtime-perl all 0.016-1 [19.4 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf libtry-tiny-perl all 0.30-1 [23.3 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf libmodule-implementation-perl all 0.09-1 [12.9 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf libpackage-stash-perl all 0.38-1 [21.7 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf libclass-load-perl all 0.25-1 [16.1 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf libclass-load-xs-perl armhf 0.10-1+b4 [14.3 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf libsub-exporter-progressive-perl all 0.001013-1 [7588 B]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf libdevel-globaldestruction-perl all 0.14-1 [8084 B]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf libalgorithm-c3-perl all 0.11-1 [11.7 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf libclass-c3-perl all 0.35-1 [22.9 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf libmro-compat-perl all 0.13-1 [12.2 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf libsub-identify-perl armhf 0.14-1+b3 [11.6 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf libdevel-overloadinfo-perl all 0.005-1 [7212 B]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf libdevel-stacktrace-perl all 2.0400-1 [28.6 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf libsub-exporter-perl all 0.987-1 [47.2 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf libeval-closure-perl all 0.14-1 [11.5 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf libdist-checkconflicts-perl all 0.11-1 [10.8 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf libmodule-runtime-conflicts-perl all 0.003-1 [6882 B]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf libsub-name-perl armhf 0.26-1+b1 [13.2 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf libpackage-deprecationmanager-perl all 0.17-1 [16.4 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf libpackage-stash-xs-perl armhf 0.29-1+b2 [18.5 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf libmoose-perl armhf 2.2013-1+b1 [806 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf libvariable-magic-perl armhf 0.62-1+b3 [43.0 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf libb-hooks-endofscope-perl all 0.24-1 [18.6 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf libnamespace-clean-perl all 0.27-1 [17.3 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf libcurl3-gnutls armhf 7.72.0-1 [297 kB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf libwww-curl-perl armhf 4.17-7+b1 [58.9 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf libwww-curl-simple-perl all 0.100191-2 [12.5 kB]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf dh-r all 20201117 [40.8 kB]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf libboost1.71-dev armhf 1.71.0-7+b1 [9098 kB]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.71.0.3+b5 [4624 B]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf node-jquery all 3.5.1+dfsg+~3.5.4-1 [390 kB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery all 3.5.1+dfsg+~3.5.4-1 [3844 B]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf r-cran-littler armhf 0.3.12-1 [92.4 kB]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf littler all 0.3.12-1 [15.6 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf node-html5shiv all 3.7.3+dfsg-3 [12.9 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biocgenerics all 0.36.0-1 [648 kB]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biobase armhf 2.50.0-1 [2228 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-s4vectors armhf 0.28.0-1 [2019 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-iranges armhf 2.24.0-1 [2204 kB]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf r-cran-dbi all 1.1.0-3 [599 kB]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bit armhf 4.0.4+dfsg-1 [418 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bit64 armhf 4.0.5-1 [463 kB]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rlang armhf 0.4.8-1 [1131 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf r-cran-ellipsis armhf 0.3.1-1 [31.5 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf r-cran-digest armhf 0.6.27-1 [186 kB]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf r-cran-glue armhf 1.4.2-1 [139 kB]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf r-cran-vctrs armhf 0.3.5-1 [1077 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf r-cran-blob all 1.2.1-2 [49.1 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf r-cran-memoise all 1.1.0-3 [39.2 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgconfig all 2.0.3-2 [19.6 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgkitten all 0.2.0-1 [25.3 kB]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcpp armhf 1.0.5-1 [2009 kB]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bh all 1.66.0-1 [5072 B]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf r-cran-plogr all 0.2.0-3 [14.9 kB]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rsqlite armhf 2.2.1-1 [911 kB]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-annotationdbi all 1.52.0-1 [4707 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf r-cran-assertthat all 0.2.1-2 [56.5 kB]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf r-cran-generics all 0.1.0-1 [73.5 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lifecycle all 0.2.0-2 [93.2 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf r-cran-magrittr all 1.5-6 [154 kB]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r6 all 2.5.0-1 [104 kB]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf r-cran-crayon all 1.3.4-5 [750 kB]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf r-cran-fansi armhf 0.4.1-1+b1 [337 kB]
Get:207 http://172.17.0.1/private bullseye-staging/main armhf r-cran-cli all 2.1.0-1 [410 kB]
Get:208 http://172.17.0.1/private bullseye-staging/main armhf r-cran-utf8 armhf 1.1.4-2 [128 kB]
Get:209 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pillar all 1.4.6-1 [227 kB]
Get:210 http://172.17.0.1/private bullseye-staging/main armhf r-cran-tibble armhf 3.0.4-1 [429 kB]
Get:211 http://172.17.0.1/private bullseye-staging/main armhf r-cran-purrr armhf 0.3.4-1+b1 [402 kB]
Get:212 http://172.17.0.1/private bullseye-staging/main armhf r-cran-tidyselect armhf 1.1.0+dfsg-1 [193 kB]
Get:213 http://172.17.0.1/private bullseye-staging/main armhf r-cran-dplyr armhf 1.0.2-1 [1138 kB]
Get:214 http://172.17.0.1/private bullseye-staging/main armhf r-cran-dbplyr all 1.4.4-1 [619 kB]
Get:215 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rappdirs armhf 0.3.1-2 [147 kB]
Get:216 http://172.17.0.1/private bullseye-staging/main armhf r-cran-curl armhf 4.3+dfsg-1+b1 [150 kB]
Get:217 http://172.17.0.1/private bullseye-staging/main armhf r-cran-jsonlite armhf 1.7.1+dfsg-1 [442 kB]
Get:218 http://172.17.0.1/private bullseye-staging/main armhf r-cran-mime armhf 0.9-1+b1 [35.4 kB]
Get:219 http://172.17.0.1/private bullseye-staging/main armhf r-cran-sys armhf 3.4-1 [42.7 kB]
Get:220 http://172.17.0.1/private bullseye-staging/main armhf r-cran-askpass armhf 1.1-2 [22.3 kB]
Get:221 http://172.17.0.1/private bullseye-staging/main armhf r-cran-openssl armhf 1.4.3+dfsg-1 [374 kB]
Get:222 http://172.17.0.1/private bullseye-staging/main armhf r-cran-httr all 1.4.2-1 [478 kB]
Get:223 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biocfilecache all 1.14.0+dfsg-1 [289 kB]
Get:224 http://172.17.0.1/private bullseye-staging/main armhf r-cran-formatr all 1.7-2 [151 kB]
Get:225 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lambda.r all 1.2.4-2 [118 kB]
Get:226 http://172.17.0.1/private bullseye-staging/main armhf r-cran-futile.options all 1.0.1-3 [20.0 kB]
Get:227 http://172.17.0.1/private bullseye-staging/main armhf r-cran-futile.logger all 1.4.3-4 [98.4 kB]
Get:228 http://172.17.0.1/private bullseye-staging/main armhf r-cran-snow all 1:0.4.3-2 [109 kB]
Get:229 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biocparallel armhf 1.24.1-1 [1136 kB]
Get:230 http://172.17.0.1/private bullseye-staging/main armhf r-cran-xml armhf 3.99-0.5-1 [1717 kB]
Get:231 http://172.17.0.1/private bullseye-staging/main armhf r-cran-hms all 0.5.3-2 [108 kB]
Get:232 http://172.17.0.1/private bullseye-staging/main armhf r-cran-prettyunits all 1.1.1-2 [39.1 kB]
Get:233 http://172.17.0.1/private bullseye-staging/main armhf r-cran-progress all 1.2.2-2 [88.9 kB]
Get:234 http://172.17.0.1/private bullseye-staging/main armhf r-cran-stringi armhf 1.5.3-1 [706 kB]
Get:235 http://172.17.0.1/private bullseye-staging/main armhf r-cran-stringr all 1.4.0-2 [199 kB]
Get:236 http://172.17.0.1/private bullseye-staging/main armhf r-cran-xml2 armhf 1.3.2-1+b1 [269 kB]
Get:237 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biomart all 2.46.0+dfsg-1 [414 kB]
Get:238 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-zlibbioc all 1.36.0+dfsg-1 [8824 B]
Get:239 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-xvector armhf 0.30.0-1 [611 kB]
Get:240 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biostrings armhf 2.58.0-1 [14.2 MB]
Get:241 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bitops armhf 1.0-6-5 [23.6 kB]
Get:242 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcurl armhf 1.98-1.2-1+b1 [788 kB]
Get:243 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomeinfodbdata all 1.2.4-1 [10.7 MB]
Get:244 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomeinfodb all 1.26.0-1 [3912 kB]
Get:245 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomicranges armhf 1.42.0+dfsg-1 [1864 kB]
Get:246 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-rhtslib armhf 1.22.0+dfsg-1 [948 kB]
Get:247 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-rsamtools armhf 2.6.0-1 [3572 kB]
Get:248 http://172.17.0.1/private bullseye-staging/main armhf r-cran-matrixstats armhf 0.57.0-1 [574 kB]
Get:249 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-matrixgenerics all 1.2.0-2 [285 kB]
Get:250 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lattice armhf 0.20-41-1+b1 [1167 kB]
Get:251 http://172.17.0.1/private bullseye-staging/main armhf r-cran-matrix armhf 1.2-18-1+b1 [3451 kB]
Get:252 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-delayedarray armhf 0.16.0+dfsg-1 [1802 kB]
Get:253 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-summarizedexperiment all 1.20.0+dfsg-1 [1955 kB]
Get:254 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomicalignments armhf 1.26.0-1 [2214 kB]
Get:255 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-rtracklayer armhf 1.50.0-1 [7406 kB]
Get:256 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-bsgenome all 1.58.0-1 [7206 kB]
Get:257 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-genomicfeatures all 1.42.1+dfsg-1 [1834 kB]
Get:258 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-variantannotation armhf 1.36.0-1 [3382 kB]
Get:259 http://172.17.0.1/private bullseye-staging/main armhf r-cran-codetools all 0.2-18-1 [91.8 kB]
Get:260 http://172.17.0.1/private bullseye-staging/main armhf r-cran-data.table armhf 1.13.2+dfsg-1 [1685 kB]
Get:261 http://172.17.0.1/private bullseye-staging/main armhf r-cran-iterators all 1.0.13-1 [329 kB]
Get:262 http://172.17.0.1/private bullseye-staging/main armhf r-cran-foreach all 1.5.1-1 [120 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up libpcre2-dev:armhf (10.34-7) ...
Setting up libtool (2.4.6-14) ...
Setting up libxcb-render0:armhf (1.14-2) ...
Setting up libpcre3-dev:armhf (2:8.39-13) ...
Setting up fontconfig-config (2.13.1-4.2) ...
Setting up libpng-dev:armhf (1.6.37-3) ...
Setting up libjpeg-dev (1:2.0.5-1.1) ...
Setting up m4 (1.4.18-4) ...
Setting up libxcb-shm0:armhf (1.14-2) ...
Setting up libpaper-utils (1.1.28) ...
Setting up libclass-c3-perl (0.35-1) ...
Setting up libreadline-dev:armhf (8.1~rc2-2) ...
Setting up libdevel-callchecker-perl (0.008-1+b2) ...
Setting up libthai0:armhf (0.1.28-3) ...
Setting up ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
126 added, 0 removed; done.
Setting up libfreetype6:armhf (2.10.2+dfsg-4) ...
Setting up liblapack-dev:armhf (3.9.0-3) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-10+b3) ...
Setting up gfortran-10 (10.2.0-16+rpi1) ...
Setting up libdata-optlist-perl (0.110-1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.9.0-1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up libncurses5-dev:armhf (6.2+20200918-1) ...
Setting up libcurl4:armhf (7.72.0-1) ...
Setting up libx11-6:armhf (2:1.6.12-1) ...
Setting up libharfbuzz0b:armhf (2.6.7-1) ...
Setting up libfontconfig1:armhf (2.13.1-4.2) ...
Setting up libmro-compat-perl (0.13-1) ...
Setting up libjs-jquery (3.5.1+dfsg+~3.5.4-1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libxmuu1:armhf (2:1.1.2-2+b3) ...
Setting up libsub-exporter-perl (0.987-1) ...
Setting up libhttp-message-perl (6.26-1) ...
Setting up libeval-closure-perl (0.14-1) ...
Setting up automake (1:1.16.2-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up fontconfig (2.13.1-4.2) ...
Regenerating fonts cache... done.
Setting up gettext (0.19.8.1-10) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libparams-classify-perl (0.015-1+b3) ...
Setting up libpango-1.0-0:armhf (1.46.2-3) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libcurl3-gnutls:armhf (7.72.0-1) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up gfortran (4:10.2.0-1+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libmodule-runtime-perl (0.016-1) ...
Setting up libdist-checkconflicts-perl (0.11-1) ...
Setting up libxt6:armhf (1:1.2.0-1) ...
Setting up xauth (1:1.0.10-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libpangoft2-1.0-0:armhf (1.46.2-3) ...
Setting up libpangocairo-1.0-0:armhf (1.46.2-3) ...
Setting up libxft2:armhf (2.3.2-2) ...
Setting up libmodule-implementation-perl (0.09-1) ...
Setting up libpackage-stash-perl (0.38-1) ...
Setting up po-debconf (1.0.21) ...
Setting up libtk8.6:armhf (8.6.10-1) ...
Setting up libwww-curl-perl (4.17-7+b1) ...
Setting up libmodule-runtime-conflicts-perl (0.003-1) ...
Setting up libclass-load-perl (0.25-1) ...
Setting up r-base-core (4.0.3-1) ...
Creating config file /etc/R/Renviron with new version
Setting up r-cran-crayon (1.3.4-5) ...
Setting up r-cran-futile.options (1.0.1-3) ...
Setting up r-cran-lattice (0.20-41-1+b1) ...
Setting up r-cran-formatr (1.7-2) ...
Setting up r-cran-xml (3.99-0.5-1) ...
Setting up libpackage-deprecationmanager-perl (0.17-1) ...
Setting up libdevel-overloadinfo-perl (0.005-1) ...
Setting up libclass-load-xs-perl (0.10-1+b4) ...
Setting up r-cran-r6 (2.5.0-1) ...
Setting up r-cran-pkgkitten (0.2.0-1) ...
Setting up libb-hooks-endofscope-perl (0.24-1) ...
Setting up r-cran-magrittr (1.5-6) ...
Setting up r-cran-rappdirs (0.3.1-2) ...
Setting up r-bioc-genomeinfodbdata (1.2.4-1) ...
Setting up r-cran-littler (0.3.12-1) ...
Setting up r-cran-rcpp (1.0.5-1) ...
Setting up r-cran-curl (4.3+dfsg-1+b1) ...
Setting up r-cran-codetools (0.2-18-1) ...
Setting up r-bioc-biocgenerics (0.36.0-1) ...
Setting up r-cran-rlang (0.4.8-1) ...
Setting up r-cran-matrixstats (0.57.0-1) ...
Setting up r-base-dev (4.0.3-1) ...
Setting up r-cran-assertthat (0.2.1-2) ...
Setting up littler (0.3.12-1) ...
Setting up r-bioc-matrixgenerics (1.2.0-2) ...
Setting up r-cran-sys (3.4-1) ...
Setting up r-cran-plogr (0.2.0-3) ...
Setting up r-cran-mime (0.9-1+b1) ...
Setting up libmoose-perl (2.2013-1+b1) ...
Setting up r-cran-generics (0.1.0-1) ...
Setting up r-cran-iterators (1.0.13-1) ...
Setting up r-cran-digest (0.6.27-1) ...
Setting up r-cran-lambda.r (1.2.4-2) ...
Setting up r-cran-xml2 (1.3.2-1+b1) ...
Setting up r-cran-dbi (1.1.0-3) ...
Setting up r-cran-foreach (1.5.1-1) ...
Setting up r-cran-prettyunits (1.1.1-2) ...
Setting up r-cran-fansi (0.4.1-1+b1) ...
Setting up r-cran-snow (1:0.4.3-2) ...
Setting up r-cran-data.table (1.13.2+dfsg-1) ...
Setting up r-cran-glue (1.4.2-1) ...
Setting up r-cran-bit (4.0.4+dfsg-1) ...
Setting up r-cran-cli (2.1.0-1) ...
Setting up r-cran-lifecycle (0.2.0-2) ...
Setting up r-cran-bitops (1.0-6-5) ...
Setting up r-cran-bit64 (4.0.5-1) ...
Setting up r-bioc-zlibbioc (1.36.0+dfsg-1) ...
Setting up r-cran-askpass (1.1-2) ...
Setting up r-bioc-biobase (2.50.0-1) ...
Setting up r-cran-jsonlite (1.7.1+dfsg-1) ...
Setting up r-cran-pkgconfig (2.0.3-2) ...
Setting up r-cran-utf8 (1.1.4-2) ...
Setting up r-cran-stringi (1.5.3-1) ...
Setting up r-bioc-s4vectors (0.28.0-1) ...
Setting up r-cran-futile.logger (1.4.3-4) ...
Setting up libnamespace-clean-perl (0.27-1) ...
Setting up r-cran-memoise (1.1.0-3) ...
Setting up r-cran-purrr (0.3.4-1+b1) ...
Setting up r-cran-matrix (1.2-18-1+b1) ...
Setting up r-bioc-iranges (2.24.0-1) ...
Setting up r-cran-rcurl (1.98-1.2-1+b1) ...
Setting up r-bioc-delayedarray (0.16.0+dfsg-1) ...
Setting up r-cran-ellipsis (0.3.1-1) ...
Setting up r-cran-openssl (1.4.3+dfsg-1) ...
Setting up r-cran-stringr (1.4.0-2) ...
Setting up r-bioc-biocparallel (1.24.1-1) ...
Setting up libwww-curl-simple-perl (0.100191-2) ...
Setting up r-bioc-rhtslib (1.22.0+dfsg-1) ...
Setting up r-bioc-genomeinfodb (1.26.0-1) ...
Setting up r-cran-httr (1.4.2-1) ...
Setting up r-bioc-xvector (0.30.0-1) ...
Setting up r-cran-vctrs (0.3.5-1) ...
Setting up r-cran-pillar (1.4.6-1) ...
Setting up r-bioc-genomicranges (1.42.0+dfsg-1) ...
Setting up r-bioc-biostrings (2.58.0-1) ...
Setting up r-cran-tibble (3.0.4-1) ...
Setting up r-cran-tidyselect (1.1.0+dfsg-1) ...
Setting up r-cran-hms (0.5.3-2) ...
Setting up r-cran-blob (1.2.1-2) ...
Setting up r-bioc-rsamtools (2.6.0-1) ...
Setting up r-cran-dplyr (1.0.2-1) ...
Setting up r-cran-dbplyr (1.4.4-1) ...
Setting up r-cran-rsqlite (2.2.1-1) ...
Setting up r-cran-progress (1.2.2-2) ...
Setting up r-bioc-summarizedexperiment (1.20.0+dfsg-1) ...
Setting up r-bioc-biocfilecache (1.14.0+dfsg-1) ...
Setting up r-bioc-annotationdbi (1.52.0-1) ...
Setting up r-bioc-biomart (2.46.0+dfsg-1) ...
Setting up r-bioc-genomicalignments (1.26.0-1) ...
Setting up r-bioc-rtracklayer (1.50.0-1) ...
Setting up r-bioc-genomicfeatures (1.42.1+dfsg-1) ...
Setting up r-bioc-bsgenome (1.58.0-1) ...
Setting up r-bioc-variantannotation (1.36.0-1) ...
Setting up debhelper (13.2.1) ...
Setting up dh-autoreconf (19) ...
Setting up dh-r (20201117) ...
Setting up sbuild-build-depends-r-bioc-titancna-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-4+rpi1) ...
Processing triggers for ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-76-generic armhf (armv8l)
Toolchain package versions: binutils_2.35.1-2+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.0-16+rpi1 gcc-10_10.2.0-16+rpi1 libc6-dev_2.31-3+rpi1 libstdc++-10-dev_10.2.0-16+rpi1 libstdc++6_10.2.0-16+rpi1 linux-libc-dev_5.7.10-1+rpi1
Package versions: adduser_3.118 apt_2.1.11 aptitude_0.8.13-2 aptitude-common_0.8.13-2 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1~rc2-1 binutils_2.35.1-2+rpi1 binutils-arm-linux-gnueabihf_2.35.1-2+rpi1 binutils-common_2.35.1-2+rpi1 bsdextrautils_2.36-3 bsdutils_1:2.36-3 build-essential_12.8 bzip2_1.0.8-4 ca-certificates_20200601 coreutils_8.32-4 cpp_4:10.2.0-1+rpi1 cpp-10_10.2.0-16+rpi1 dash_0.5.11+git20200708+dd9ef66-2 dctrl-tools_2.24-3 debconf_1.5.74 debhelper_13.2.1 debianutils_4.11.2 dh-autoreconf_19 dh-r_20201117 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1 fdisk_2.36-3 file_1:5.38-5 findutils_4.7.0+git20201010-2 fontconfig_2.13.1-4.2 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-2 g++_4:10.2.0-1+rpi1 g++-10_10.2.0-16+rpi1 gcc_4:10.2.0-1+rpi1 gcc-10_10.2.0-16+rpi1 gcc-10-base_10.2.0-16+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran_4:10.2.0-1+rpi1 gfortran-10_10.2.0-16+rpi1 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 icu-devtools_67.1-4 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20200821-2 libacl1_2.2.53-8 libalgorithm-c3-perl_0.11-1 libapt-pkg6.0_2.1.11 libarchive-zip-perl_1.68-1 libasan6_10.2.0-16+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-16+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1 libb-hooks-endofscope-perl_0.24-1 libb-hooks-op-check-perl_0.22-1+b4 libbinutils_2.35.1-2+rpi1 libblas-dev_3.9.0-3 libblas3_3.9.0-3 libblkid1_2.36-3 libboost-dev_1.71.0.3+b5 libboost-iostreams1.71.0_1.71.0-7 libboost1.71-dev_1.71.0-7+b1 libbrotli1_1.0.9-2 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-4 libbz2-dev_1.0.8-4 libc-bin_2.31-4+rpi1 libc-dev-bin_2.31-3+rpi1 libc6_2.31-3+rpi1 libc6-dev_2.31-3+rpi1 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2.2 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_10.2.0-16+rpi1 libclass-c3-perl_0.35-1 libclass-load-perl_0.25-1 libclass-load-xs-perl_0.10-1+b4 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-2+rpi1 libctf0_2.35.1-2+rpi1 libcurl3-gnutls_7.72.0-1 libcurl4_7.72.0-1 libcwidget4_0.5.18-5 libdata-optlist-perl_0.110-1 libdatrie1_0.2.12-3+b5 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.2.1 libdevel-callchecker-perl_0.008-1+b2 libdevel-globaldestruction-perl_0.14-1 libdevel-overloadinfo-perl_0.005-1 libdevel-stacktrace-perl_2.0400-1 libdist-checkconflicts-perl_0.11-1 libdpkg-perl_1.20.5+rpi1 libdynaloader-functions-perl_0.003-1 libelf1_0.182-1 libencode-locale-perl_1.05-1 libeval-closure-perl_0.14-1 libexpat1_2.2.10-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1 libfdisk1_2.36-3 libffi7_3.3-5 libfile-stripnondeterminism-perl_1.9.0-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-4.2 libfreetype6_2.10.2+dfsg-4 libfribidi0_1.0.8-2 libgcc-10-dev_10.2.0-16+rpi1 libgcc-s1_10.2.0-16+rpi1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libgfortran-10-dev_10.2.0-16+rpi1 libgfortran5_10.2.0-16+rpi1 libglib2.0-0_2.66.3-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.15-4 libgomp1_10.2.0-16+rpi1 libgpg-error0_1.38-2 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.17-10+b3 libharfbuzz0b_2.6.7-1 libhogweed6_3.6-2 libhttp-date-perl_6.05-1 libhttp-message-perl_6.26-1 libice6_2:1.0.10-1 libicu-dev_67.1-4 libicu67_67.1-4 libidn2-0_2.3.0-3 libio-html-perl_1.001-1 libisl22_0.22.1-1 libjbig0_2.1-3.1+b2 libjpeg-dev_1:2.0.5-1.1 libjpeg62-turbo_1:2.0.5-1.1 libjpeg62-turbo-dev_1:2.0.5-1.1 libjs-jquery_3.5.1+dfsg+~3.5.4-1 libk5crypto3_1.17-10+b3 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10+b3 libkrb5support0_1.17-10+b3 libksba8_1.4.0-2 liblapack-dev_3.9.0-3 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libparams-classify-perl_0.015-1+b3 libparams-util-perl_1.102-1+b1 libpcre16-3_2:8.39-13 libpcre2-16-0_10.34-7 libpcre2-32-0_10.34-7 libpcre2-8-0_10.34-7 libpcre2-dev_10.34-7 libpcre2-posix2_10.34-7 libpcre3_2:8.39-13 libpcre3-dev_2:8.39-13 libpcre32-3_2:8.39-13 libpcrecpp0v5_2:8.39-13 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libpixman-1-0_0.36.0-1 libpng-dev_1.6.37-3 libpng16-16_1.6.37-3 libpsl5_0.21.0-1.1 libreadline-dev_8.1~rc2-2 libreadline8_8.1~rc2-2 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.5.0-3+rpi1 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigc++-2.0-0v5_2.10.4-2 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.36-3 libsqlite3-0_3.33.0-1 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1h-1 libstdc++-10-dev_10.2.0-16+rpi1 libstdc++6_10.2.0-16+rpi1 libsub-exporter-perl_0.987-1 libsub-exporter-progressive-perl_0.001013-1 libsub-identify-perl_0.14-1+b3 libsub-install-perl_0.928-1 libsub-name-perl_0.26-1+b1 libsub-override-perl_0.09-2 libswitch-perl_2.17-2 libsystemd0_246.6-2+rpi1 libtasn1-6_4.16.0-2 libtcl8.6_8.6.10+dfsg-1 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0+git191117-2 libtimedate-perl_2.3300-1 libtinfo6_6.2+20200918-1 libtk8.6_8.6.10-1 libtool_2.4.6-14 libtry-tiny-perl_0.30-1 libubsan1_10.2.0-16+rpi1 libuchardet0_0.0.7-1 libudev1_246.6-2+rpi1 libunistring2_0.9.10-4 liburi-perl_5.05-1 libuuid1_2.36-3 libvariable-magic-perl_0.62-1+b3 libwebp6_0.6.1-2 libwww-curl-perl_4.17-7+b1 libwww-curl-simple-perl_0.100191-2 libx11-6_2:1.6.12-1 libx11-data_2:1.6.12-1 libxapian30_1.4.17-1 libxau6_1:1.0.8-1+b2 libxcb-render0_1.14-2 libxcb-shm0_1.14-2 libxcb1_1.14-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-2 libxml2_2.9.10+dfsg-6.2 libxmuu1_2:1.1.2-2+b3 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.2.0-1 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.7.10-1+rpi1 littler_0.3.12-1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36-3 ncurses-base_6.2+20200918-1 ncurses-bin_6.2+20200918-1 netbase_6.2 node-html5shiv_3.7.3+dfsg-3 node-jquery_3.5.1+dfsg+~3.5.4-1 openssl_1.1.1h-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.32_5.32.0-5 pinentry-curses_1.1.0-4 pkg-config_0.29.2-1 po-debconf_1.0.21 r-base-core_4.0.3-1 r-base-dev_4.0.3-1 r-bioc-annotationdbi_1.52.0-1 r-bioc-biobase_2.50.0-1 r-bioc-biocfilecache_1.14.0+dfsg-1 r-bioc-biocgenerics_0.36.0-1 r-bioc-biocparallel_1.24.1-1 r-bioc-biomart_2.46.0+dfsg-1 r-bioc-biostrings_2.58.0-1 r-bioc-bsgenome_1.58.0-1 r-bioc-delayedarray_0.16.0+dfsg-1 r-bioc-genomeinfodb_1.26.0-1 r-bioc-genomeinfodbdata_1.2.4-1 r-bioc-genomicalignments_1.26.0-1 r-bioc-genomicfeatures_1.42.1+dfsg-1 r-bioc-genomicranges_1.42.0+dfsg-1 r-bioc-iranges_2.24.0-1 r-bioc-matrixgenerics_1.2.0-2 r-bioc-rhtslib_1.22.0+dfsg-1 r-bioc-rsamtools_2.6.0-1 r-bioc-rtracklayer_1.50.0-1 r-bioc-s4vectors_0.28.0-1 r-bioc-summarizedexperiment_1.20.0+dfsg-1 r-bioc-variantannotation_1.36.0-1 r-bioc-xvector_0.30.0-1 r-bioc-zlibbioc_1.36.0+dfsg-1 r-cran-askpass_1.1-2 r-cran-assertthat_0.2.1-2 r-cran-bh_1.66.0-1 r-cran-bit_4.0.4+dfsg-1 r-cran-bit64_4.0.5-1 r-cran-bitops_1.0-6-5 r-cran-blob_1.2.1-2 r-cran-cli_2.1.0-1 r-cran-codetools_0.2-18-1 r-cran-crayon_1.3.4-5 r-cran-curl_4.3+dfsg-1+b1 r-cran-data.table_1.13.2+dfsg-1 r-cran-dbi_1.1.0-3 r-cran-dbplyr_1.4.4-1 r-cran-digest_0.6.27-1 r-cran-dplyr_1.0.2-1 r-cran-ellipsis_0.3.1-1 r-cran-fansi_0.4.1-1+b1 r-cran-foreach_1.5.1-1 r-cran-formatr_1.7-2 r-cran-futile.logger_1.4.3-4 r-cran-futile.options_1.0.1-3 r-cran-generics_0.1.0-1 r-cran-glue_1.4.2-1 r-cran-hms_0.5.3-2 r-cran-httr_1.4.2-1 r-cran-iterators_1.0.13-1 r-cran-jsonlite_1.7.1+dfsg-1 r-cran-lambda.r_1.2.4-2 r-cran-lattice_0.20-41-1+b1 r-cran-lifecycle_0.2.0-2 r-cran-littler_0.3.12-1 r-cran-magrittr_1.5-6 r-cran-matrix_1.2-18-1+b1 r-cran-matrixstats_0.57.0-1 r-cran-memoise_1.1.0-3 r-cran-mime_0.9-1+b1 r-cran-openssl_1.4.3+dfsg-1 r-cran-pillar_1.4.6-1 r-cran-pkgconfig_2.0.3-2 r-cran-pkgkitten_0.2.0-1 r-cran-plogr_0.2.0-3 r-cran-prettyunits_1.1.1-2 r-cran-progress_1.2.2-2 r-cran-purrr_0.3.4-1+b1 r-cran-r6_2.5.0-1 r-cran-rappdirs_0.3.1-2 r-cran-rcpp_1.0.5-1 r-cran-rcurl_1.98-1.2-1+b1 r-cran-rlang_0.4.8-1 r-cran-rsqlite_2.2.1-1 r-cran-snow_1:0.4.3-2 r-cran-stringi_1.5.3-1 r-cran-stringr_1.4.0-2 r-cran-sys_3.4-1 r-cran-tibble_3.0.4-1 r-cran-tidyselect_1.1.0+dfsg-1 r-cran-utf8_1.1.4-2 r-cran-vctrs_0.3.5-1 r-cran-xml_3.99-0.5-1 r-cran-xml2_1.3.2-1+b1 raspbian-archive-keyring_20120528.2 readline-common_8.1~rc2-2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-titancna-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.30+dfsg-7 tzdata_2020d-1 ucf_3.0043 unzip_6.0-25 util-linux_2.36-3 x11-common_1:7.7+21 xauth_1:1.0.10-1 xdg-utils_1.1.3-2 xz-utils_5.2.4-1 zip_3.0-11 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.ZEpddkys/trustedkeys.kbx': General error
gpgv: Signature made Fri Nov 20 20:57:36 2020 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-bioc-titancna_1.28.0-1.dsc
dpkg-source: info: extracting r-bioc-titancna in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-bioc-titancna_1.28.0.orig.tar.gz
dpkg-source: info: unpacking r-bioc-titancna_1.28.0-1.debian.tar.xz
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-b161ff62-e1a5-4676-8d78-983774c95e72
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package r-bioc-titancna
dpkg-buildpackage: info: source version 1.28.0-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --buildsystem R
dh_auto_clean -O--buildsystem=R
dh_autoreconf_clean -O--buildsystem=R
dh_clean -O--buildsystem=R
debian/rules binary-arch
dh binary-arch --buildsystem R
dh_update_autotools_config -a -O--buildsystem=R
dh_autoreconf -a -O--buildsystem=R
dh_auto_configure -a -O--buildsystem=R
dh_auto_build -a -O--buildsystem=R
dh_auto_test -a -O--buildsystem=R
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=R
dh_prep -a -O--buildsystem=R
dh_auto_install -a -O--buildsystem=R
I: R Package: TitanCNA Version: 1.28.0
I: Building using R version 4.0.3-1
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Fri, 20 Nov 2020 21:47:51 +0100
mkdir -p /<<PKGBUILDDIR>>/debian/r-bioc-titancna/usr/lib/R/site-library
R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-bioc-titancna/usr/lib/R/site-library --clean . "--built-timestamp='Fri, 20 Nov 2020 21:47:51 +0100'"
* installing *source* package 'TitanCNA' ...
** using staged installation
** libs
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-sMz9ls/r-base-4.0.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fwd_backC_clonalCN.c -o fwd_backC_clonalCN.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-sMz9ls/r-base-4.0.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c getPositionOverlapC.c -o getPositionOverlapC.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-sMz9ls/r-base-4.0.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c register.c -o register.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-sMz9ls/r-base-4.0.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c viterbiC_clonalCN.c -o viterbiC_clonalCN.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-z,relro -o TitanCNA.so fwd_backC_clonalCN.o getPositionOverlapC.o register.o viterbiC_clonalCN.o -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-bioc-titancna/usr/lib/R/site-library/00LOCK-r-bioc-titancna-1.28.0/00new/TitanCNA/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'GenomicRanges::shift' by 'data.table::shift' when loading 'TitanCNA'
Warning: replacing previous import 'IRanges::collapse' by 'dplyr::collapse' when loading 'TitanCNA'
Warning: replacing previous import 'data.table::last' by 'dplyr::last' when loading 'TitanCNA'
Warning: replacing previous import 'GenomicRanges::union' by 'dplyr::union' when loading 'TitanCNA'
Warning: replacing previous import 'IRanges::slice' by 'dplyr::slice' when loading 'TitanCNA'
Warning: replacing previous import 'GenomeInfoDb::intersect' by 'dplyr::intersect' when loading 'TitanCNA'
Warning: replacing previous import 'GenomicRanges::setdiff' by 'dplyr::setdiff' when loading 'TitanCNA'
Warning: replacing previous import 'data.table::first' by 'dplyr::first' when loading 'TitanCNA'
Warning: replacing previous import 'IRanges::desc' by 'dplyr::desc' when loading 'TitanCNA'
Warning: replacing previous import 'BiocGenerics::combine' by 'dplyr::combine' when loading 'TitanCNA'
Warning: replacing previous import 'data.table::between' by 'dplyr::between' when loading 'TitanCNA'
Warning: replacing previous import 'dplyr::select' by 'VariantAnnotation::select' when loading 'TitanCNA'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'GenomicRanges::shift' by 'data.table::shift' when loading 'TitanCNA'
Warning: replacing previous import 'IRanges::collapse' by 'dplyr::collapse' when loading 'TitanCNA'
Warning: replacing previous import 'data.table::last' by 'dplyr::last' when loading 'TitanCNA'
Warning: replacing previous import 'GenomicRanges::union' by 'dplyr::union' when loading 'TitanCNA'
Warning: replacing previous import 'IRanges::slice' by 'dplyr::slice' when loading 'TitanCNA'
Warning: replacing previous import 'GenomeInfoDb::intersect' by 'dplyr::intersect' when loading 'TitanCNA'
Warning: replacing previous import 'GenomicRanges::setdiff' by 'dplyr::setdiff' when loading 'TitanCNA'
Warning: replacing previous import 'data.table::first' by 'dplyr::first' when loading 'TitanCNA'
Warning: replacing previous import 'IRanges::desc' by 'dplyr::desc' when loading 'TitanCNA'
Warning: replacing previous import 'BiocGenerics::combine' by 'dplyr::combine' when loading 'TitanCNA'
Warning: replacing previous import 'data.table::between' by 'dplyr::between' when loading 'TitanCNA'
Warning: replacing previous import 'dplyr::select' by 'VariantAnnotation::select' when loading 'TitanCNA'
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
Warning: replacing previous import 'GenomicRanges::shift' by 'data.table::shift' when loading 'TitanCNA'
Warning: replacing previous import 'IRanges::collapse' by 'dplyr::collapse' when loading 'TitanCNA'
Warning: replacing previous import 'data.table::last' by 'dplyr::last' when loading 'TitanCNA'
Warning: replacing previous import 'GenomicRanges::union' by 'dplyr::union' when loading 'TitanCNA'
Warning: replacing previous import 'IRanges::slice' by 'dplyr::slice' when loading 'TitanCNA'
Warning: replacing previous import 'GenomeInfoDb::intersect' by 'dplyr::intersect' when loading 'TitanCNA'
Warning: replacing previous import 'GenomicRanges::setdiff' by 'dplyr::setdiff' when loading 'TitanCNA'
Warning: replacing previous import 'data.table::first' by 'dplyr::first' when loading 'TitanCNA'
Warning: replacing previous import 'IRanges::desc' by 'dplyr::desc' when loading 'TitanCNA'
Warning: replacing previous import 'BiocGenerics::combine' by 'dplyr::combine' when loading 'TitanCNA'
Warning: replacing previous import 'data.table::between' by 'dplyr::between' when loading 'TitanCNA'
Warning: replacing previous import 'dplyr::select' by 'VariantAnnotation::select' when loading 'TitanCNA'
** testing if installed package keeps a record of temporary installation path
* DONE (TitanCNA)
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 299.
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 300.
Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 303.
W: Ignoring specified R dependency: R (>= 3.5.1)
I: Using r-bioc-biocgenerics for Imports:BiocGenerics (>= 0.31.6)
I: Using r-bioc-iranges for Imports:IRanges (>= 2.6.1)
I: Using r-bioc-genomicranges for Imports:GenomicRanges (>= 1.24.3)
I: Using r-bioc-variantannotation for Imports:VariantAnnotation (>= 1.18.7)
I: Using r-cran-foreach for Imports:foreach (>= 1.4.3)
I: Using r-bioc-genomeinfodb for Imports:GenomeInfoDb (>= 1.8.7)
I: Using r-cran-data.table for Imports:data.table (>= 1.10.4)
I: Using r-cran-dplyr for Imports:dplyr (>= 0.5.0)
I: BioConductor API version: r-api-bioc-3.12
I: Use r-bioc-titancna as Debian binary package for variables substitution
dh_installdocs -a -O--buildsystem=R
dh_installchangelogs -a -O--buildsystem=R
dh_installinit -a -O--buildsystem=R
dh_installsystemduser -a -O--buildsystem=R
dh_perl -a -O--buildsystem=R
dh_link -a -O--buildsystem=R
dh_strip_nondeterminism -a -O--buildsystem=R
dh_compress -a -O--buildsystem=R
debian/rules override_dh_fixperms
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_fixperms
find debian -iname "*.rda" -exec chmod -x \{\} \;
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_missing -a -O--buildsystem=R
dh_dwz -a -O--buildsystem=R
dh_strip -a -O--buildsystem=R
dh_makeshlibs -a -O--buildsystem=R
dh_shlibdeps -a -O--buildsystem=R
dh_installdeb -a -O--buildsystem=R
dh_gencontrol -a -O--buildsystem=R
dh_md5sums -a -O--buildsystem=R
dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-bioc-titancna-dbgsym' in '../r-bioc-titancna-dbgsym_1.28.0-1_armhf.deb'.
dpkg-deb: building package 'r-bioc-titancna' in '../r-bioc-titancna_1.28.0-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../r-bioc-titancna_1.28.0-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-11-24T23:43:51Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
r-bioc-titancna_1.28.0-1_armhf.changes:
---------------------------------------
Format: 1.8
Date: Fri, 20 Nov 2020 21:47:51 +0100
Source: r-bioc-titancna
Binary: r-bioc-titancna r-bioc-titancna-dbgsym
Architecture: armhf
Version: 1.28.0-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
r-bioc-titancna - Subclonal copy number and LOH prediction from whole genome sequen
Closes: 975352
Changes:
r-bioc-titancna (1.28.0-1) unstable; urgency=medium
.
* Initial release (closes: #975352)
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Files:
1a904ec55d0778a0596fc95ea4de0970 15524 debug optional r-bioc-titancna-dbgsym_1.28.0-1_armhf.deb
e5b1211dbaf18efdfc9ca2be7e4eaa8d 12189 gnu-r optional r-bioc-titancna_1.28.0-1_armhf.buildinfo
91cadfae1f8dbca9bb565cc8e289c084 3950432 gnu-r optional r-bioc-titancna_1.28.0-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
r-bioc-titancna-dbgsym_1.28.0-1_armhf.deb
-----------------------------------------
new Debian package, version 2.0.
size 15524 bytes: control archive=540 bytes.
397 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: r-bioc-titancna-dbgsym
Source: r-bioc-titancna
Version: 1.28.0-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 29
Depends: r-bioc-titancna (= 1.28.0-1)
Section: debug
Priority: optional
Description: debug symbols for r-bioc-titancna
Build-Ids: c80b77a487f320376a8091f8ec9948316c5b11df
drwxr-xr-x root/root 0 2020-11-20 20:47 ./
drwxr-xr-x root/root 0 2020-11-20 20:47 ./usr/
drwxr-xr-x root/root 0 2020-11-20 20:47 ./usr/lib/
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r-bioc-titancna_1.28.0-1_armhf.deb
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size 3950432 bytes: control archive=1856 bytes.
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Package: r-bioc-titancna
Version: 1.28.0-1
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 7611
Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-api-bioc-3.12, r-bioc-biocgenerics (>= 0.31.6), r-bioc-iranges (>= 2.6.1), r-bioc-genomicranges (>= 1.24.3), r-bioc-variantannotation (>= 1.18.7), r-cran-foreach (>= 1.4.3), r-bioc-genomeinfodb (>= 1.8.7), r-cran-data.table (>= 1.10.4), r-cran-dplyr (>= 0.5.0), libc6 (>= 2.4)
Section: gnu-r
Priority: optional
Homepage: https://bioconductor.org/packages/TitanCNA/
Description: Subclonal copy number and LOH prediction from whole genome sequencing
Hidden Markov model to segment and predict regions of
subclonal copy number alterations (CNA) and loss of
heterozygosity (LOH), and estimate cellular prevalence of
clonal clusters in tumour whole genome sequencing data.
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Build Architecture: armhf
Build-Space: 19324
Build-Time: 137
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 1240
Job: r-bioc-titancna_1.28.0-1
Machine Architecture: armhf
Package: r-bioc-titancna
Package-Time: 1396
Source-Version: 1.28.0-1
Space: 19324
Status: successful
Version: 1.28.0-1
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Finished at 2020-11-24T23:43:51Z
Build needed 00:23:16, 19324k disk space