Raspbian Package Auto-Building

Build log for r-bioc-affy (1.58.0-2) on armhf

r-bioc-affy1.58.0-2armhf → 2018-05-08 22:55:31

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-01

+==============================================================================+
| r-bioc-affy 1.58.0-2 (armhf)                 Tue, 08 May 2018 22:38:38 +0000 |
+==============================================================================+

Package: r-bioc-affy
Version: 1.58.0-2
Source Version: 1.58.0-2
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/buster-staging-armhf-sbuild-98d04926-5b5e-4c49-9693-641815210640' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.7 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.5 MB]
Fetched 23.2 MB in 26s (888 kB/s)
Reading package lists...

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'r-bioc-affy' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-bioc-affy.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-bioc-affy.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1323 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main r-bioc-affy 1.58.0-2 (dsc) [2146 B]
Get:2 http://172.17.0.1/private buster-staging/main r-bioc-affy 1.58.0-2 (tar) [1316 kB]
Get:3 http://172.17.0.1/private buster-staging/main r-bioc-affy 1.58.0-2 (diff) [4864 B]
Fetched 1323 kB in 0s (8053 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-bioc-affy-L1JDhp/r-bioc-affy-1.58.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-bioc-affy-L1JDhp' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-DYsHyc/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-DYsHyc/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-DYsHyc/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (3214 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-DYsHyc/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  ca-certificates e2fsprogs-l10n libsasl2-modules libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 20 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15506 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper (>= 11~), dh-r, r-base-dev, r-bioc-biocgenerics, r-bioc-biobase, r-bioc-affyio, r-bioc-biocinstaller, r-bioc-preprocesscore
Filtered Build-Depends: debhelper (>= 11~), dh-r, r-base-dev, r-bioc-biocgenerics, r-bioc-biobase, r-bioc-affyio, r-bioc-biocinstaller, r-bioc-preprocesscore
dpkg-deb: building package 'sbuild-build-depends-r-bioc-affy-dummy' in '/<<BUILDDIR>>/resolver-DYsHyc/apt_archive/sbuild-build-depends-r-bioc-affy-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-r-bioc-affy-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ Sources [544 B]
Get:5 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ Packages [627 B]
Fetched 2504 B in 1s (3654 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-DYsHyc/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...

Install r-bioc-affy build dependencies (apt-based resolver)
-----------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  e2fsprogs-l10n libsasl2-modules
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils cdbs dctrl-tools
  debhelper dh-autoreconf dh-r dh-strip-nondeterminism file fontconfig
  fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-7
  groff-base icu-devtools intltool-debian libarchive-zip-perl libblas-dev
  libblas3 libbsd0 libbz2-dev libcairo2 libcroco3 libcurl3 libdatrie1
  libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6
  libfribidi0 libgfortran-7-dev libgfortran4 libglib2.0-0 libgraphite2-3
  libgssapi-krb5-2 libharfbuzz0b libice6 libicu-dev libicu57 libjbig0
  libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1
  libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblzma-dev libmagic-mgc
  libmagic1 libncurses-dev libncurses5-dev libncurses6 libncursesw6
  libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
  libpaper-utils libpaper1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5
  libpipeline1 libpixman-1-0 libpng-dev libpsl5 libreadline-dev librtmp1
  libsigsegv2 libsm6 libssh2-1 libssl1.0.2 libtcl8.6 libthai-data libthai0
  libtiff5 libtimedate-perl libtinfo6 libtk8.6 libtool libx11-6 libx11-data
  libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
  libxml2 libxmuu1 libxrender1 libxss1 libxt6 m4 man-db pkg-config po-debconf
  r-base-core r-base-dev r-bioc-affyio r-bioc-biobase r-bioc-biocgenerics
  r-bioc-biocinstaller r-bioc-preprocesscore ucf unzip x11-common xauth
  xdg-utils zip zlib1g zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation devscripts debtags dh-make dwz gettext-doc libasprintf-dev
  libgettextpo-dev gfortran-doc gfortran-7-doc libgfortran4-dbg
  libcoarrays-dev groff liblapack-doc krb5-doc krb5-user icu-doc liblzma-doc
  readline-doc tcl8.6 tk8.6 libtool-doc gcj-jdk m4-doc apparmor less
  www-browser libmail-box-perl ess r-doc-info | r-doc-pdf r-mathlib
  r-base-html texlive-base texlive-latex-base texlive-generic-recommended
  texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
  texlive-latex-recommended texlive-latex-extra texinfo r-cran-runit
  r-bioc-s4vectors r-bioc-iranges r-bioc-genomicranges r-bioc-rsamtools
  r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 r-bioc-annotate
Recommended packages:
  curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
  shared-mime-info xdg-user-dirs krb5-locales libgpm2 libpng-tools
  publicsuffix libltdl-dev libmail-sendmail-perl r-recommended r-doc-html
  libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
  x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils cdbs dctrl-tools
  debhelper dh-autoreconf dh-r dh-strip-nondeterminism file fontconfig
  fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-7
  groff-base icu-devtools intltool-debian libarchive-zip-perl libblas-dev
  libblas3 libbsd0 libbz2-dev libcairo2 libcroco3 libcurl3 libdatrie1
  libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6
  libfribidi0 libgfortran-7-dev libgfortran4 libglib2.0-0 libgraphite2-3
  libgssapi-krb5-2 libharfbuzz0b libice6 libicu-dev libicu57 libjbig0
  libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1
  libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblzma-dev libmagic-mgc
  libmagic1 libncurses-dev libncurses5-dev libncurses6 libncursesw6
  libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
  libpaper-utils libpaper1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5
  libpipeline1 libpixman-1-0 libpng-dev libpsl5 libreadline-dev librtmp1
  libsigsegv2 libsm6 libssh2-1 libssl1.0.2 libtcl8.6 libthai-data libthai0
  libtiff5 libtimedate-perl libtinfo6 libtk8.6 libtool libx11-6 libx11-data
  libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
  libxml2 libxmuu1 libxrender1 libxss1 libxt6 m4 man-db pkg-config po-debconf
  r-base-core r-base-dev r-bioc-affyio r-bioc-biobase r-bioc-biocgenerics
  r-bioc-biocinstaller r-bioc-preprocesscore
  sbuild-build-depends-r-bioc-affy-dummy ucf unzip x11-common xauth xdg-utils
  zip zlib1g-dev
The following packages will be upgraded:
  zlib1g
1 upgraded, 123 newly installed, 0 to remove and 19 not upgraded.
Need to get 84.7 MB/84.8 MB of archives.
After this operation, 249 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-DYsHyc/apt_archive ./ sbuild-build-depends-r-bioc-affy-dummy 0.invalid.0 [908 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.8.7-1 [96.8 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf zlib1g armhf 1:1.2.11.dfsg-1 [87.3 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.3-2 [1146 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13-1 [131 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.5-1 [292 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.5-1 [683 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf x11-common all 1:7.7+19 [251 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libxss1 armhf 1:1.2.2-1 [16.8 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libssl1.0.2 armhf 1.0.2o-1 [888 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.33-2 [234 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.33-2 [106 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.33-2 [64.7 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-6 [117 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libkeyutils1 armhf 1.5.9-9.2 [12.1 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0038 [67.8 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3.1 [736 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-6 [434 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf cdbs all 0.4.156 [83.1 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf dctrl-tools armhf 2.24-2 [94.4 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2.1 [547 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 17 [16.5 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.60-1 [95.6 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.041-1 [19.9 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.041-1 [12.0 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.56.1-2 [2754 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libicu57 armhf 57.1-9 [7414 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-6.1 [602 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-2 [132 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-6 [1218 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.2.1 [1013 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf unzip armhf 6.0-21 [149 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.24+nmu5 [20.8 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.24+nmu5 [17.2 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.2-2 [72.8 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.3.0-12 [191 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-1 [103 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.8.1-2 [402 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.0-4 [280 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.0-4 [325 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libpixman-1-0 armhf 0.34.0-2 [451 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.13-1 [107 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.13-1 [98.3 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.15.10-3 [575 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libkrb5support0 armhf 1.16-2 [59.0 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libk5crypto3 armhf 1.16-2 [116 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libkrb5-3 armhf 1.16-2 [265 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libgssapi-krb5-2 armhf 1.16-2 [135 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.31.1-1 [69.4 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.20.1-1 [51.4 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-1 [54.2 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-1 [126 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf libcurl3 armhf 7.58.0-2 [276 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.8.0-1 [1518 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.13.0-4 [403 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libfribidi0 armhf 0.19.7-2 [44.1 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.27-2 [168 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.11-1 [34.6 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.27-2 [50.2 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.42.0-1 [158 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.11-2 [73.5 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 1.7.6-1 [799 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.42.0-1 [53.2 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.42.0-1 [43.3 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libsm6 armhf 2:1.2.2-1+b3 [31.2 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libtcl8.6 armhf 8.6.8+dfsg-4 [863 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.9-5 [224 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libtk8.6 armhf 8.6.8-4 [657 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf libxt6 armhf 1:1.1.5-1 [155 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf r-base-core armhf 3.4.4-1 [23.0 MB]
Get:91 http://172.17.0.1/private buster-staging/main armhf libgfortran-7-dev armhf 7.3.0-12 [232 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf gfortran-7 armhf 7.3.0-12 [5454 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf gfortran armhf 4:7.2.0-1d1 [1352 B]
Get:94 http://172.17.0.1/private buster-staging/main armhf libblas-dev armhf 3.8.0-1 [111 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf liblapack-dev armhf 3.8.0-1 [1577 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libtinfo6 armhf 6.1+20180210-2 [307 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf libncurses6 armhf 6.1+20180210-2 [78.3 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libncursesw6 armhf 6.1+20180210-2 [103 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf libncurses-dev armhf 6.1+20180210-2 [278 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf libncurses5-dev armhf 6.1+20180210-2 [920 B]
Get:101 http://172.17.0.1/private buster-staging/main armhf libreadline-dev armhf 7.0-3 [109 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf libpcre16-3 armhf 2:8.39-9 [234 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf libpcre32-3 armhf 2:8.39-9 [226 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf libpcrecpp0v5 armhf 2:8.39-9 [150 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libpcre3-dev armhf 2:8.39-9 [561 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf libpng-dev armhf 1.6.34-1 [274 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf libbz2-dev armhf 1.0.6-8.1 [26.9 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf liblzma-dev armhf 5.2.2-1.3 [284 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf icu-devtools armhf 57.1-9 [157 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf libicu-dev armhf 57.1-9 [15.8 MB]
Get:114 http://172.17.0.1/private buster-staging/main armhf libxmuu1 armhf 2:1.1.2-2 [23.0 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf pkg-config armhf 0.29-4 [59.2 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf r-base-dev all 3.4.4-1 [4488 B]
Get:118 http://172.17.0.1/private buster-staging/main armhf dh-r all 20180403 [12.3 kB]
Get:119 http://172.17.0.1/private buster-staging/main armhf r-bioc-affyio armhf 1.50.0-1 [66.2 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf r-bioc-biocgenerics all 0.26.0-2 [582 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf r-bioc-biobase armhf 2.40.0-1 [2026 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf r-bioc-biocinstaller all 1.28.0-1 [60.6 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf r-bioc-preprocesscore armhf 1.42.0-1 [110 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 84.7 MB in 10s (8792 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 15506 files and directories currently installed.)
Preparing to unpack .../libbsd0_0.8.7-1_armhf.deb ...
Unpacking libbsd0:armhf (0.8.7-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../bsdmainutils_11.1.2_armhf.deb ...
Unpacking bsdmainutils (11.1.2) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../groff-base_1.22.3-10_armhf.deb ...
Unpacking groff-base (1.22.3-10) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../libpipeline1_1.5.0-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.0-1) ...
Preparing to unpack .../zlib1g_1%3a1.2.11.dfsg-1_armhf.deb ...
Unpacking zlib1g:armhf (1:1.2.11.dfsg-1) over (1:1.2.8.dfsg-5) ...
Setting up zlib1g:armhf (1:1.2.11.dfsg-1) ...
Selecting previously unselected package man-db.
(Reading database ... 15823 files and directories currently installed.)
Preparing to unpack .../000-man-db_2.8.3-2_armhf.deb ...
Unpacking man-db (2.8.3-2) ...
Selecting previously unselected package libxau6:armhf.
Preparing to unpack .../001-libxau6_1%3a1.0.8-1+b2_armhf.deb ...
Unpacking libxau6:armhf (1:1.0.8-1+b2) ...
Selecting previously unselected package libxdmcp6:armhf.
Preparing to unpack .../002-libxdmcp6_1%3a1.1.2-3_armhf.deb ...
Unpacking libxdmcp6:armhf (1:1.1.2-3) ...
Selecting previously unselected package libxcb1:armhf.
Preparing to unpack .../003-libxcb1_1.13-1_armhf.deb ...
Unpacking libxcb1:armhf (1.13-1) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../004-libx11-data_2%3a1.6.5-1_all.deb ...
Unpacking libx11-data (2:1.6.5-1) ...
Selecting previously unselected package libx11-6:armhf.
Preparing to unpack .../005-libx11-6_2%3a1.6.5-1_armhf.deb ...
Unpacking libx11-6:armhf (2:1.6.5-1) ...
Selecting previously unselected package libxext6:armhf.
Preparing to unpack .../006-libxext6_2%3a1.3.3-1+b2_armhf.deb ...
Unpacking libxext6:armhf (2:1.3.3-1+b2) ...
Selecting previously unselected package x11-common.
Preparing to unpack .../007-x11-common_1%3a7.7+19_all.deb ...
Unpacking x11-common (1:7.7+19) ...
Selecting previously unselected package libxss1:armhf.
Preparing to unpack .../008-libxss1_1%3a1.2.2-1_armhf.deb ...
Unpacking libxss1:armhf (1:1.2.2-1) ...
Selecting previously unselected package libssl1.0.2:armhf.
Preparing to unpack .../009-libssl1.0.2_1.0.2o-1_armhf.deb ...
Unpacking libssl1.0.2:armhf (1.0.2o-1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../010-libmagic-mgc_1%3a5.33-2_armhf.deb ...
Unpacking libmagic-mgc (1:5.33-2) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../011-libmagic1_1%3a5.33-2_armhf.deb ...
Unpacking libmagic1:armhf (1:5.33-2) ...
Selecting previously unselected package file.
Preparing to unpack .../012-file_1%3a5.33-2_armhf.deb ...
Unpacking file (1:5.33-2) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../013-gettext-base_0.19.8.1-6_armhf.deb ...
Unpacking gettext-base (0.19.8.1-6) ...
Selecting previously unselected package libkeyutils1:armhf.
Preparing to unpack .../014-libkeyutils1_1.5.9-9.2_armhf.deb ...
Unpacking libkeyutils1:armhf (1.5.9-9.2) ...
Selecting previously unselected package ucf.
Preparing to unpack .../015-ucf_3.0038_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0038) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../016-libsigsegv2_2.12-2_armhf.deb ...
Unpacking libsigsegv2:armhf (2.12-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../017-m4_1.4.18-1_armhf.deb ...
Unpacking m4 (1.4.18-1) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../018-autoconf_2.69-11_all.deb ...
Unpacking autoconf (2.69-11) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../019-autotools-dev_20180224.1_all.deb ...
Unpacking autotools-dev (20180224.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../020-automake_1%3a1.15.1-3.1_all.deb ...
Unpacking automake (1:1.15.1-3.1) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../021-autopoint_0.19.8.1-6_all.deb ...
Unpacking autopoint (0.19.8.1-6) ...
Selecting previously unselected package cdbs.
Preparing to unpack .../022-cdbs_0.4.156_all.deb ...
Unpacking cdbs (0.4.156) ...
Selecting previously unselected package dctrl-tools.
Preparing to unpack .../023-dctrl-tools_2.24-2_armhf.deb ...
Unpacking dctrl-tools (2.24-2) ...
Selecting previously unselected package libtool.
Preparing to unpack .../024-libtool_2.4.6-2.1_all.deb ...
Unpacking libtool (2.4.6-2.1) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../025-dh-autoreconf_17_all.deb ...
Unpacking dh-autoreconf (17) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../026-libarchive-zip-perl_1.60-1_all.deb ...
Unpacking libarchive-zip-perl (1.60-1) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../027-libfile-stripnondeterminism-perl_0.041-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (0.041-1) ...
Selecting previously unselected package libtimedate-perl.
Preparing to unpack .../028-libtimedate-perl_2.3000-2_all.deb ...
Unpacking libtimedate-perl (2.3000-2) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../029-dh-strip-nondeterminism_0.041-1_all.deb ...
Unpacking dh-strip-nondeterminism (0.041-1) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../030-libglib2.0-0_2.56.1-2_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.56.1-2) ...
Selecting previously unselected package libicu57:armhf.
Preparing to unpack .../031-libicu57_57.1-9_armhf.deb ...
Unpacking libicu57:armhf (57.1-9) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../032-libxml2_2.9.4+dfsg1-6.1_armhf.deb ...
Unpacking libxml2:armhf (2.9.4+dfsg1-6.1) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../033-libcroco3_0.6.12-2_armhf.deb ...
Unpacking libcroco3:armhf (0.6.12-2) ...
Selecting previously unselected package gettext.
Preparing to unpack .../034-gettext_0.19.8.1-6_armhf.deb ...
Unpacking gettext (0.19.8.1-6) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../035-intltool-debian_0.35.0+20060710.4_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.4) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../036-po-debconf_1.0.20_all.deb ...
Unpacking po-debconf (1.0.20) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../037-debhelper_11.2.1_all.deb ...
Unpacking debhelper (11.2.1) ...
Selecting previously unselected package zip.
Preparing to unpack .../038-zip_3.0-11_armhf.deb ...
Unpacking zip (3.0-11) ...
Selecting previously unselected package unzip.
Preparing to unpack .../039-unzip_6.0-21_armhf.deb ...
Unpacking unzip (6.0-21) ...
Selecting previously unselected package libpaper1:armhf.
Preparing to unpack .../040-libpaper1_1.1.24+nmu5_armhf.deb ...
Unpacking libpaper1:armhf (1.1.24+nmu5) ...
Selecting previously unselected package libpaper-utils.
Preparing to unpack .../041-libpaper-utils_1.1.24+nmu5_armhf.deb ...
Unpacking libpaper-utils (1.1.24+nmu5) ...
Selecting previously unselected package xdg-utils.
Preparing to unpack .../042-xdg-utils_1.1.2-2_all.deb ...
Unpacking xdg-utils (1.1.2-2) ...
Selecting previously unselected package libgfortran4:armhf.
Preparing to unpack .../043-libgfortran4_7.3.0-12_armhf.deb ...
Unpacking libgfortran4:armhf (7.3.0-12) ...
Selecting previously unselected package libblas3:armhf.
Preparing to unpack .../044-libblas3_3.8.0-1_armhf.deb ...
Unpacking libblas3:armhf (3.8.0-1) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../045-libexpat1_2.2.5-3_armhf.deb ...
Unpacking libexpat1:armhf (2.2.5-3) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../046-libfreetype6_2.8.1-2_armhf.deb ...
Unpacking libfreetype6:armhf (2.8.1-2) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../047-fonts-dejavu-core_2.37-1_all.deb ...
Unpacking fonts-dejavu-core (2.37-1) ...
Selecting previously unselected package fontconfig-config.
Preparing to unpack .../048-fontconfig-config_2.13.0-4_all.deb ...
Unpacking fontconfig-config (2.13.0-4) ...
Selecting previously unselected package libfontconfig1:armhf.
Preparing to unpack .../049-libfontconfig1_2.13.0-4_armhf.deb ...
Unpacking libfontconfig1:armhf (2.13.0-4) ...
Selecting previously unselected package libpixman-1-0:armhf.
Preparing to unpack .../050-libpixman-1-0_0.34.0-2_armhf.deb ...
Unpacking libpixman-1-0:armhf (0.34.0-2) ...
Selecting previously unselected package libxcb-render0:armhf.
Preparing to unpack .../051-libxcb-render0_1.13-1_armhf.deb ...
Unpacking libxcb-render0:armhf (1.13-1) ...
Selecting previously unselected package libxcb-shm0:armhf.
Preparing to unpack .../052-libxcb-shm0_1.13-1_armhf.deb ...
Unpacking libxcb-shm0:armhf (1.13-1) ...
Selecting previously unselected package libxrender1:armhf.
Preparing to unpack .../053-libxrender1_1%3a0.9.10-1_armhf.deb ...
Unpacking libxrender1:armhf (1:0.9.10-1) ...
Selecting previously unselected package libcairo2:armhf.
Preparing to unpack .../054-libcairo2_1.15.10-3_armhf.deb ...
Unpacking libcairo2:armhf (1.15.10-3) ...
Selecting previously unselected package libkrb5support0:armhf.
Preparing to unpack .../055-libkrb5support0_1.16-2_armhf.deb ...
Unpacking libkrb5support0:armhf (1.16-2) ...
Selecting previously unselected package libk5crypto3:armhf.
Preparing to unpack .../056-libk5crypto3_1.16-2_armhf.deb ...
Unpacking libk5crypto3:armhf (1.16-2) ...
Selecting previously unselected package libkrb5-3:armhf.
Preparing to unpack .../057-libkrb5-3_1.16-2_armhf.deb ...
Unpacking libkrb5-3:armhf (1.16-2) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Preparing to unpack .../058-libgssapi-krb5-2_1.16-2_armhf.deb ...
Unpacking libgssapi-krb5-2:armhf (1.16-2) ...
Selecting previously unselected package libnghttp2-14:armhf.
Preparing to unpack .../059-libnghttp2-14_1.31.1-1_armhf.deb ...
Unpacking libnghttp2-14:armhf (1.31.1-1) ...
Selecting previously unselected package libpsl5:armhf.
Preparing to unpack .../060-libpsl5_0.20.1-1_armhf.deb ...
Unpacking libpsl5:armhf (0.20.1-1) ...
Selecting previously unselected package librtmp1:armhf.
Preparing to unpack .../061-librtmp1_2.4+20151223.gitfa8646d.1-1_armhf.deb ...
Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-1) ...
Selecting previously unselected package libssh2-1:armhf.
Preparing to unpack .../062-libssh2-1_1.8.0-1_armhf.deb ...
Unpacking libssh2-1:armhf (1.8.0-1) ...
Selecting previously unselected package libcurl3:armhf.
Preparing to unpack .../063-libcurl3_7.58.0-2_armhf.deb ...
Unpacking libcurl3:armhf (7.58.0-2) ...
Selecting previously unselected package libice6:armhf.
Preparing to unpack .../064-libice6_2%3a1.0.9-2_armhf.deb ...
Unpacking libice6:armhf (2:1.0.9-2) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../065-libjpeg62-turbo_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package liblapack3:armhf.
Preparing to unpack .../066-liblapack3_3.8.0-1_armhf.deb ...
Unpacking liblapack3:armhf (3.8.0-1) ...
Selecting previously unselected package fontconfig.
Preparing to unpack .../067-fontconfig_2.13.0-4_armhf.deb ...
Unpacking fontconfig (2.13.0-4) ...
Selecting previously unselected package libfribidi0:armhf.
Preparing to unpack .../068-libfribidi0_0.19.7-2_armhf.deb ...
Unpacking libfribidi0:armhf (0.19.7-2) ...
Selecting previously unselected package libthai-data.
Preparing to unpack .../069-libthai-data_0.1.27-2_all.deb ...
Unpacking libthai-data (0.1.27-2) ...
Selecting previously unselected package libdatrie1:armhf.
Preparing to unpack .../070-libdatrie1_0.2.11-1_armhf.deb ...
Unpacking libdatrie1:armhf (0.2.11-1) ...
Selecting previously unselected package libthai0:armhf.
Preparing to unpack .../071-libthai0_0.1.27-2_armhf.deb ...
Unpacking libthai0:armhf (0.1.27-2) ...
Selecting previously unselected package libpango-1.0-0:armhf.
Preparing to unpack .../072-libpango-1.0-0_1.42.0-1_armhf.deb ...
Unpacking libpango-1.0-0:armhf (1.42.0-1) ...
Selecting previously unselected package libgraphite2-3:armhf.
Preparing to unpack .../073-libgraphite2-3_1.3.11-2_armhf.deb ...
Unpacking libgraphite2-3:armhf (1.3.11-2) ...
Selecting previously unselected package libharfbuzz0b:armhf.
Preparing to unpack .../074-libharfbuzz0b_1.7.6-1_armhf.deb ...
Unpacking libharfbuzz0b:armhf (1.7.6-1) ...
Selecting previously unselected package libpangoft2-1.0-0:armhf.
Preparing to unpack .../075-libpangoft2-1.0-0_1.42.0-1_armhf.deb ...
Unpacking libpangoft2-1.0-0:armhf (1.42.0-1) ...
Selecting previously unselected package libpangocairo-1.0-0:armhf.
Preparing to unpack .../076-libpangocairo-1.0-0_1.42.0-1_armhf.deb ...
Unpacking libpangocairo-1.0-0:armhf (1.42.0-1) ...
Selecting previously unselected package libsm6:armhf.
Preparing to unpack .../077-libsm6_2%3a1.2.2-1+b3_armhf.deb ...
Unpacking libsm6:armhf (2:1.2.2-1+b3) ...
Selecting previously unselected package libtcl8.6:armhf.
Preparing to unpack .../078-libtcl8.6_8.6.8+dfsg-4_armhf.deb ...
Unpacking libtcl8.6:armhf (8.6.8+dfsg-4) ...
Selecting previously unselected package libjbig0:armhf.
Preparing to unpack .../079-libjbig0_2.1-3.1+b2_armhf.deb ...
Unpacking libjbig0:armhf (2.1-3.1+b2) ...
Selecting previously unselected package libtiff5:armhf.
Preparing to unpack .../080-libtiff5_4.0.9-5_armhf.deb ...
Unpacking libtiff5:armhf (4.0.9-5) ...
Selecting previously unselected package libxft2:armhf.
Preparing to unpack .../081-libxft2_2.3.2-2_armhf.deb ...
Unpacking libxft2:armhf (2.3.2-2) ...
Selecting previously unselected package libtk8.6:armhf.
Preparing to unpack .../082-libtk8.6_8.6.8-4_armhf.deb ...
Unpacking libtk8.6:armhf (8.6.8-4) ...
Selecting previously unselected package libxt6:armhf.
Preparing to unpack .../083-libxt6_1%3a1.1.5-1_armhf.deb ...
Unpacking libxt6:armhf (1:1.1.5-1) ...
Selecting previously unselected package r-base-core.
Preparing to unpack .../084-r-base-core_3.4.4-1_armhf.deb ...
Unpacking r-base-core (3.4.4-1) ...
Selecting previously unselected package libgfortran-7-dev:armhf.
Preparing to unpack .../085-libgfortran-7-dev_7.3.0-12_armhf.deb ...
Unpacking libgfortran-7-dev:armhf (7.3.0-12) ...
Selecting previously unselected package gfortran-7.
Preparing to unpack .../086-gfortran-7_7.3.0-12_armhf.deb ...
Unpacking gfortran-7 (7.3.0-12) ...
Selecting previously unselected package gfortran.
Preparing to unpack .../087-gfortran_4%3a7.2.0-1d1_armhf.deb ...
Unpacking gfortran (4:7.2.0-1d1) ...
Selecting previously unselected package libblas-dev:armhf.
Preparing to unpack .../088-libblas-dev_3.8.0-1_armhf.deb ...
Unpacking libblas-dev:armhf (3.8.0-1) ...
Selecting previously unselected package liblapack-dev:armhf.
Preparing to unpack .../089-liblapack-dev_3.8.0-1_armhf.deb ...
Unpacking liblapack-dev:armhf (3.8.0-1) ...
Selecting previously unselected package libtinfo6:armhf.
Preparing to unpack .../090-libtinfo6_6.1+20180210-2_armhf.deb ...
Unpacking libtinfo6:armhf (6.1+20180210-2) ...
Selecting previously unselected package libncurses6:armhf.
Preparing to unpack .../091-libncurses6_6.1+20180210-2_armhf.deb ...
Unpacking libncurses6:armhf (6.1+20180210-2) ...
Selecting previously unselected package libncursesw6:armhf.
Preparing to unpack .../092-libncursesw6_6.1+20180210-2_armhf.deb ...
Unpacking libncursesw6:armhf (6.1+20180210-2) ...
Selecting previously unselected package libncurses-dev:armhf.
Preparing to unpack .../093-libncurses-dev_6.1+20180210-2_armhf.deb ...
Unpacking libncurses-dev:armhf (6.1+20180210-2) ...
Selecting previously unselected package libncurses5-dev:armhf.
Preparing to unpack .../094-libncurses5-dev_6.1+20180210-2_armhf.deb ...
Unpacking libncurses5-dev:armhf (6.1+20180210-2) ...
Selecting previously unselected package libreadline-dev:armhf.
Preparing to unpack .../095-libreadline-dev_7.0-3_armhf.deb ...
Unpacking libreadline-dev:armhf (7.0-3) ...
Selecting previously unselected package libjpeg62-turbo-dev:armhf.
Preparing to unpack .../096-libjpeg62-turbo-dev_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package libjpeg-dev.
Preparing to unpack .../097-libjpeg-dev_1%3a1.5.2-2_all.deb ...
Unpacking libjpeg-dev (1:1.5.2-2) ...
Selecting previously unselected package libpcre16-3:armhf.
Preparing to unpack .../098-libpcre16-3_2%3a8.39-9_armhf.deb ...
Unpacking libpcre16-3:armhf (2:8.39-9) ...
Selecting previously unselected package libpcre32-3:armhf.
Preparing to unpack .../099-libpcre32-3_2%3a8.39-9_armhf.deb ...
Unpacking libpcre32-3:armhf (2:8.39-9) ...
Selecting previously unselected package libpcrecpp0v5:armhf.
Preparing to unpack .../100-libpcrecpp0v5_2%3a8.39-9_armhf.deb ...
Unpacking libpcrecpp0v5:armhf (2:8.39-9) ...
Selecting previously unselected package libpcre3-dev:armhf.
Preparing to unpack .../101-libpcre3-dev_2%3a8.39-9_armhf.deb ...
Unpacking libpcre3-dev:armhf (2:8.39-9) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../102-zlib1g-dev_1%3a1.2.11.dfsg-1_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-1) ...
Selecting previously unselected package libpng-dev:armhf.
Preparing to unpack .../103-libpng-dev_1.6.34-1_armhf.deb ...
Unpacking libpng-dev:armhf (1.6.34-1) ...
Selecting previously unselected package libbz2-dev:armhf.
Preparing to unpack .../104-libbz2-dev_1.0.6-8.1_armhf.deb ...
Unpacking libbz2-dev:armhf (1.0.6-8.1) ...
Selecting previously unselected package liblzma-dev:armhf.
Preparing to unpack .../105-liblzma-dev_5.2.2-1.3_armhf.deb ...
Unpacking liblzma-dev:armhf (5.2.2-1.3) ...
Selecting previously unselected package icu-devtools.
Preparing to unpack .../106-icu-devtools_57.1-9_armhf.deb ...
Unpacking icu-devtools (57.1-9) ...
Selecting previously unselected package libicu-dev.
Preparing to unpack .../107-libicu-dev_57.1-9_armhf.deb ...
Unpacking libicu-dev (57.1-9) ...
Selecting previously unselected package libxmuu1:armhf.
Preparing to unpack .../108-libxmuu1_2%3a1.1.2-2_armhf.deb ...
Unpacking libxmuu1:armhf (2:1.1.2-2) ...
Selecting previously unselected package xauth.
Preparing to unpack .../109-xauth_1%3a1.0.10-1_armhf.deb ...
Unpacking xauth (1:1.0.10-1) ...
Selecting previously unselected package pkg-config.
Preparing to unpack .../110-pkg-config_0.29-4_armhf.deb ...
Unpacking pkg-config (0.29-4) ...
Selecting previously unselected package r-base-dev.
Preparing to unpack .../111-r-base-dev_3.4.4-1_all.deb ...
Unpacking r-base-dev (3.4.4-1) ...
Selecting previously unselected package dh-r.
Preparing to unpack .../112-dh-r_20180403_all.deb ...
Unpacking dh-r (20180403) ...
Selecting previously unselected package r-bioc-affyio.
Preparing to unpack .../113-r-bioc-affyio_1.50.0-1_armhf.deb ...
Unpacking r-bioc-affyio (1.50.0-1) ...
Selecting previously unselected package r-bioc-biocgenerics.
Preparing to unpack .../114-r-bioc-biocgenerics_0.26.0-2_all.deb ...
Unpacking r-bioc-biocgenerics (0.26.0-2) ...
Selecting previously unselected package r-bioc-biobase.
Preparing to unpack .../115-r-bioc-biobase_2.40.0-1_armhf.deb ...
Unpacking r-bioc-biobase (2.40.0-1) ...
Selecting previously unselected package r-bioc-biocinstaller.
Preparing to unpack .../116-r-bioc-biocinstaller_1.28.0-1_all.deb ...
Unpacking r-bioc-biocinstaller (1.28.0-1) ...
Selecting previously unselected package r-bioc-preprocesscore.
Preparing to unpack .../117-r-bioc-preprocesscore_1.42.0-1_armhf.deb ...
Unpacking r-bioc-preprocesscore (1.42.0-1) ...
Selecting previously unselected package sbuild-build-depends-r-bioc-affy-dummy.
Preparing to unpack .../118-sbuild-build-depends-r-bioc-affy-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-r-bioc-affy-dummy (0.invalid.0) ...
Setting up cdbs (0.4.156) ...
Setting up libexpat1:armhf (2.2.5-3) ...
Setting up libbz2-dev:armhf (1.0.6-8.1) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libarchive-zip-perl (1.60-1) ...
Setting up libnghttp2-14:armhf (1.31.1-1) ...
Setting up libgfortran4:armhf (7.3.0-12) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up libpsl5:armhf (0.20.1-1) ...
Setting up groff-base (1.22.3-10) ...
Setting up libglib2.0-0:armhf (2.56.1-2) ...
No schema files found: doing nothing.
Setting up libtinfo6:armhf (6.1+20180210-2) ...
Setting up unzip (6.0-21) ...
Setting up dctrl-tools (2.24-2) ...
Setting up libdatrie1:armhf (0.2.11-1) ...
Setting up libtiff5:armhf (4.0.9-5) ...
Setting up gettext-base (0.19.8.1-6) ...
Setting up libpipeline1:armhf (1.5.0-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-1) ...
Setting up m4 (1.4.18-1) ...
Setting up libicu57:armhf (57.1-9) ...
Setting up libbsd0:armhf (0.8.7-1) ...
Setting up ucf (3.0038) ...
Setting up libxml2:armhf (2.9.4+dfsg1-6.1) ...
Setting up zip (3.0-11) ...
Setting up libfreetype6:armhf (2.8.1-2) ...
Setting up libmagic-mgc (1:5.33-2) ...
Setting up libmagic1:armhf (1:5.33-2) ...
Setting up libgraphite2-3:armhf (1.3.11-2) ...
Setting up libcroco3:armhf (0.6.12-2) ...
Setting up libssl1.0.2:armhf (1.0.2o-1) ...
Setting up pkg-config (0.29-4) ...
Setting up libpixman-1-0:armhf (0.34.0-2) ...
Setting up libblas3:armhf (3.8.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libssh2-1:armhf (1.8.0-1) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
Setting up autotools-dev (20180224.1) ...
Processing triggers for systemd (238-4) ...
Setting up libgfortran-7-dev:armhf (7.3.0-12) ...
Setting up libfribidi0:armhf (0.19.7-2) ...
Setting up gfortran-7 (7.3.0-12) ...
Setting up libpcrecpp0v5:armhf (2:8.39-9) ...
Setting up libpcre32-3:armhf (2:8.39-9) ...
Setting up icu-devtools (57.1-9) ...
Setting up libpcre16-3:armhf (2:8.39-9) ...
Setting up libtcl8.6:armhf (8.6.8+dfsg-4) ...
Setting up libthai-data (0.1.27-2) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Setting up liblzma-dev:armhf (5.2.2-1.3) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libkeyutils1:armhf (1.5.9-9.2) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up xdg-utils (1.1.2-2) ...
Setting up libncurses6:armhf (6.1+20180210-2) ...
Setting up libx11-data (2:1.6.5-1) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up autopoint (0.19.8.1-6) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1) ...
Setting up libfile-stripnondeterminism-perl (0.041-1) ...
Setting up libpaper1:armhf (1.1.24+nmu5) ...

Creating config file /etc/papersize with new version
Setting up gfortran (4:7.2.0-1d1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libpaper-utils (1.1.24+nmu5) ...
Setting up libpcre3-dev:armhf (2:8.39-9) ...
Setting up fontconfig-config (2.13.0-4) ...
Setting up gettext (0.19.8.1-6) ...
Setting up libblas-dev:armhf (3.8.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up liblapack3:armhf (3.8.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libncursesw6:armhf (6.1+20180210-2) ...
Setting up libharfbuzz0b:armhf (1.7.6-1) ...
Setting up autoconf (2.69-11) ...
Setting up libthai0:armhf (0.1.27-2) ...
Setting up libicu-dev (57.1-9) ...
Setting up file (1:5.33-2) ...
Setting up libkrb5support0:armhf (1.16-2) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up automake (1:1.15.1-3.1) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up man-db (2.8.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libpng-dev:armhf (1.6.34-1) ...
Setting up libncurses-dev:armhf (6.1+20180210-2) ...
Setting up libxcb1:armhf (1.13-1) ...
Setting up liblapack-dev:armhf (3.8.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libtool (2.4.6-2.1) ...
Setting up libfontconfig1:armhf (2.13.0-4) ...
Setting up libsm6:armhf (2:1.2.2-1+b3) ...
Setting up libk5crypto3:armhf (1.16-2) ...
Setting up libxcb-render0:armhf (1.13-1) ...
Setting up po-debconf (1.0.20) ...
Setting up libx11-6:armhf (2:1.6.5-1) ...
Setting up libxmuu1:armhf (2:1.1.2-2) ...
Setting up libncurses5-dev:armhf (6.1+20180210-2) ...
Setting up libreadline-dev:armhf (7.0-3) ...
Setting up libxcb-shm0:armhf (1.13-1) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libkrb5-3:armhf (1.16-2) ...
Setting up libxft2:armhf (2.3.2-2) ...
Setting up fontconfig (2.13.0-4) ...
Regenerating fonts cache... done.
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libxss1:armhf (1:1.2.2-1) ...
Setting up libgssapi-krb5-2:armhf (1.16-2) ...
Setting up xauth (1:1.0.10-1) ...
Setting up libpango-1.0-0:armhf (1.42.0-1) ...
Setting up libcairo2:armhf (1.15.10-3) ...
Setting up libcurl3:armhf (7.58.0-2) ...
Setting up libtk8.6:armhf (8.6.8-4) ...
Setting up libpangoft2-1.0-0:armhf (1.42.0-1) ...
Setting up libpangocairo-1.0-0:armhf (1.42.0-1) ...
Setting up r-base-core (3.4.4-1) ...

Creating config file /etc/R/Renviron with new version
Setting up r-base-dev (3.4.4-1) ...
Setting up r-bioc-biocgenerics (0.26.0-2) ...
Setting up r-bioc-biobase (2.40.0-1) ...
Setting up r-bioc-preprocesscore (1.42.0-1) ...
Setting up r-bioc-biocinstaller (1.28.0-1) ...
Setting up r-bioc-affyio (1.50.0-1) ...
Setting up dh-autoreconf (17) ...
Setting up dh-strip-nondeterminism (0.041-1) ...
Setting up debhelper (11.2.1) ...
Setting up dh-r (20180403) ...
Setting up sbuild-build-depends-r-bioc-affy-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
Processing triggers for systemd (238-4) ...

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.30-15+rpi1 dpkg-dev_1.19.0.5 g++-7_7.3.0-12 gcc-7_7.3.0-12 libc6-dev_2.27-3+rpi1 libstdc++-7-dev_7.3.0-12 libstdc++6_8-20180414-1+rpi1 linux-libc-dev_4.15.17-1+rpi1
Package versions: adduser_3.117 apt_1.6.1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-2+b1 binutils_2.30-15+rpi1 binutils-arm-linux-gnueabihf_2.30-15+rpi1 binutils-common_2.30-15+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.31.1-0.5 build-essential_12.4+b1 bzip2_1.0.6-8.1 ca-certificates_20170717 cdbs_0.4.156 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.3.0-12 dash_0.5.8-2.10 dctrl-tools_2.24-2 debconf_1.5.66 debhelper_11.2.1 debianutils_4.8.4 dh-autoreconf_17 dh-r_20180403 dh-strip-nondeterminism_0.041-1 diffutils_1:3.6-1 dirmngr_2.2.5-1 dmsetup_2:1.02.145-4.1 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.44.1-2 e2fsprogs_1.44.1-2 e2fsprogs-l10n_1.44.1-2 fakeroot_1.22-2 fdisk_2.31.1-0.5 file_1:5.33-2 findutils_4.6.0+git+20171230-2 fontconfig_2.13.0-4 fontconfig-config_2.13.0-4 fonts-dejavu-core_2.37-1 g++_4:7.2.0-1d1 g++-7_7.3.0-12 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1 gcc-5-base_5.5.0-8 gcc-7_7.3.0-12 gcc-7-base_7.3.0-12 gcc-8-base_8-20180414-1+rpi1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 gfortran_4:7.2.0-1d1 gfortran-7_7.3.0-12 gnupg_2.2.5-1 gnupg-agent_2.2.5-1 gnupg-l10n_2.2.5-1 gnupg-utils_2.2.5-1 gpg_2.2.5-1 gpg-agent_2.2.5-1 gpg-wks-client_2.2.5-1 gpg-wks-server_2.2.5-1 gpgconf_2.2.5-1 gpgsm_2.2.5-1 gpgv_2.2.5-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5 hostname_3.20 icu-devtools_57.1-9 inetutils-ping_2:1.9.4-3 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-11+rpi1 kmod_25-1 libacl1_2.2.52-3 libapparmor1_2.12-4 libapt-pkg5.0_1.6.1 libarchive-zip-perl_1.60-1 libargon2-0_0~20161029-2 libasan4_7.3.0-12 libassuan0_2.5.1-2 libatomic1_8-20180414-1+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.2-1 libaudit1_1:2.8.2-1 libbinutils_2.30-15+rpi1 libblas-dev_3.8.0-1 libblas3_3.8.0-1 libblkid1_2.31.1-0.5 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libbz2-dev_1.0.6-8.1 libc-bin_2.27-3+rpi1 libc-dev-bin_2.27-3+rpi1 libc6_2.27-3+rpi1 libc6-dev_2.27-3+rpi1 libcairo2_1.15.10-3 libcap-ng0_0.7.7-3.1+b1 libcap2_1:2.25-1.2 libcc1-0_8-20180414-1+rpi1 libcilkrts5_7.3.0-12 libcom-err2_1.44.1-2 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.2-1 libcryptsetup4_2:1.7.5-1 libcurl3_7.58.0-2 libdatrie1_0.2.11-1 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.6-2 libdebconfclient0_0.243 libdevmapper1.02.1_2:1.02.145-4.1 libdpkg-perl_1.19.0.5 libdrm-common_2.4.91-2+rpi1 libdrm2_2.4.91-2+rpi1 libexpat1_2.2.5-3 libext2fs2_1.44.1-2 libfakeroot_1.22-2 libfdisk1_2.31.1-0.5 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.041-1 libfontconfig1_2.13.0-4 libfreetype6_2.8.1-2 libfribidi0_0.19.7-2 libgcc-7-dev_7.3.0-12 libgcc1_1:8-20180414-1+rpi1 libgcrypt20_1.8.2-2 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libgfortran-7-dev_7.3.0-12 libgfortran4_7.3.0-12 libglib2.0-0_2.56.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8-20180414-1+rpi1 libgpg-error0_1.29-4 libgraphite2-3_1.3.11-2 libgssapi-krb5-2_1.16-2 libharfbuzz0b_1.7.6-1 libhogweed4_3.4-1 libice6_2:1.0.9-2 libicu-dev_57.1-9 libicu57_57.1-9 libidn11_1.33-2.2 libidn2-0_2.0.4-1.1 libip4tc0_1.6.2-1 libisl15_0.18-4 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjson-c3_0.12.1-1.3 libk5crypto3_1.16-2 libkeyutils1_1.5.9-9.2 libklibc_2.0.4-11+rpi1 libkmod2_25-1 libkrb5-3_1.16-2 libkrb5support0_1.16-2 libksba8_1.3.5-2 liblapack-dev_3.8.0-1 liblapack3_3.8.0-1 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 liblz4-1_1.8.1.2-1+rpi1 liblzma-dev_5.2.2-1.3 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.33-2 libmagic1_1:5.33-2 libmount1_2.31.1-0.5 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libncurses-dev_6.1+20180210-2 libncurses5_6.1-1 libncurses5-dev_6.1+20180210-2 libncurses6_6.1+20180210-2 libncursesw5_6.1-1 libncursesw6_6.1+20180210-2 libnettle6_3.4-1 libnghttp2-14_1.31.1-1 libnpth0_1.5-3 libp11-kit0_0.23.10-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam0g_1.1.8-3.7 libpango-1.0-0_1.42.0-1 libpangocairo-1.0-0_1.42.0-1 libpangoft2-1.0-0_1.42.0-1 libpaper-utils_1.1.24+nmu5 libpaper1_1.1.24+nmu5 libpcre16-3_2:8.39-9 libpcre3_2:8.39-9 libpcre3-dev_2:8.39-9 libpcre32-3_2:8.39-9 libpcrecpp0v5_2:8.39-9 libperl5.24_5.24.1-7 libperl5.26_5.26.2-2 libpipeline1_1.5.0-1 libpixman-1-0_0.34.0-2 libplymouth4_0.9.3-2 libpng-dev_1.6.34-1 libpng16-16_1.6.34-1 libprocps6_2:3.3.14-1 libpsl5_0.20.1-1 libreadline-dev_7.0-3 libreadline7_7.0-3 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3.1 libseccomp2_2.3.3-1 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.12-2 libsm6_2:1.2.2-1+b3 libsmartcols1_2.31.1-0.5 libsqlite3-0_3.23.1-1 libss2_1.44.1-2 libssh2-1_1.8.0-1 libssl1.0.2_1.0.2o-1 libssl1.1_1.1.0h-2 libstdc++-7-dev_7.3.0-12 libstdc++6_8-20180414-1+rpi1 libsystemd0_238-4 libtasn1-6_4.13-2 libtcl8.6_8.6.8+dfsg-4 libthai-data_0.1.27-2 libthai0_0.1.27-2 libtiff5_4.0.9-5 libtimedate-perl_2.3000-2 libtinfo5_6.1-1 libtinfo6_6.1+20180210-2 libtk8.6_8.6.8-4 libtool_2.4.6-2.1 libubsan0_7.3.0-12 libudev1_238-4 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.31.1-0.5 libx11-6_2:1.6.5-1 libx11-data_2:1.6.5-1 libxau6_1:1.0.8-1+b2 libxcb-render0_1.13-1 libxcb-shm0_1.13-1 libxcb1_1.13-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-2 libxml2_2.9.4+dfsg1-6.1 libxmuu1_2:1.1.2-2 libxrender1_1:0.9.10-1 libxss1_1:1.2.2-1 libxt6_1:1.1.5-1 libzstd1_1.3.3+dfsg-2+rpi1 linux-base_4.5 linux-libc-dev_4.15.17-1+rpi1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.8.3-2 mawk_1.3.3-17 mount_2.31.1-0.5 multiarch-support_2.27-3+rpi1 nano_2.9.5-1 ncurses-base_6.1-1 ncurses-bin_6.1-1 netbase_5.4 openssl_1.1.0h-2 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.2-2 perl-base_5.26.2-2 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.2-3 pinentry-curses_1.1.0-1 pkg-config_0.29-4 plymouth_0.9.3-2 po-debconf_1.0.20 procps_2:3.3.14-1 r-base-core_3.4.4-1 r-base-dev_3.4.4-1 r-bioc-affyio_1.50.0-1 r-bioc-biobase_2.40.0-1 r-bioc-biocgenerics_0.26.0-2 r-bioc-biocinstaller_1.28.0-1 r-bioc-preprocesscore_1.42.0-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-affy-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 systemd_238-4 sysvinit-utils_2.88dsf-59.10 tar_1.29b-2 tzdata_2018d-1 ucf_3.0038 udev_238-4 unzip_6.0-21 util-linux_2.31.1-0.5 x11-common_1:7.7+19 xauth_1:1.0.10-1 xdg-utils_1.1.2-2 xz-utils_5.2.2-1.3 zip_3.0-11 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Sat May  5 20:58:48 2018 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-bioc-affy_1.58.0-2.dsc
dpkg-source: info: extracting r-bioc-affy in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-bioc-affy_1.58.0.orig.tar.gz
dpkg-source: info: unpacking r-bioc-affy_1.58.0-2.debian.tar.xz
dpkg-source: info: applying use_debian_packaged_zlib.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-98d04926-5b5e-4c49-9693-641815210640
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package r-bioc-affy
dpkg-buildpackage: info: source version 1.58.0-2
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build r-bioc-affy-1.58.0
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
dh clean --buildsystem R
   dh_testdir -O--buildsystem=R
   dh_auto_clean -O--buildsystem=R
   dh_autoreconf_clean -O--buildsystem=R
   dh_clean -O--buildsystem=R
 debian/rules build-arch
dh build-arch --buildsystem R
   dh_testdir -a -O--buildsystem=R
   dh_update_autotools_config -a -O--buildsystem=R
   dh_autoreconf -a -O--buildsystem=R
   dh_auto_configure -a -O--buildsystem=R
   dh_auto_build -a -O--buildsystem=R
   dh_auto_test -a -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
 fakeroot debian/rules binary-arch
dh binary-arch --buildsystem R
   dh_testroot -a -O--buildsystem=R
   dh_prep -a -O--buildsystem=R
   dh_installdirs -a -O--buildsystem=R
   dh_auto_install -a -O--buildsystem=R
I: R Package: affy Version: 1.58.0
I: Building using R version 3.4.4-1
I: R API version: r-api-3.4
I: Using built-time from d/changelog: Sat, 05 May 2018 22:55:44 +0200
	mkdir -p /<<PKGBUILDDIR>>/debian/r-bioc-affy/usr/lib/R/site-library
	R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-bioc-affy/usr/lib/R/site-library --clean . "--built-timestamp='Sat, 05 May 2018 22:55:44 +0200'"
* installing *source* package 'affy' ...
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for main in -lz... yes
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
checking if zlib version >= 1.1.3... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -I"/usr/lib/R/site-library/preprocessCore/include"   -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-1Z1lf8/r-base-3.4.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c chipbackground.c -o chipbackground.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -I"/usr/lib/R/site-library/preprocessCore/include"   -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-1Z1lf8/r-base-3.4.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c getall_locations.c -o getall_locations.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -I"/usr/lib/R/site-library/preprocessCore/include"   -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-1Z1lf8/r-base-3.4.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c mas5calls.c -o mas5calls.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -I"/usr/lib/R/site-library/preprocessCore/include"   -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-1Z1lf8/r-base-3.4.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c rma2.c -o rma2.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -I"/usr/lib/R/site-library/preprocessCore/include"   -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-1Z1lf8/r-base-3.4.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c rma_common.c -o rma_common.o
g++ -shared -L/usr/lib/R/lib -Wl,-z,relro -o affy.so chipbackground.o getall_locations.o mas5calls.o rma2.o rma_common.o -lz -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-bioc-affy/usr/lib/R/site-library/affy/libs
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (affy)
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 290.
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 291.
Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 294.
W: Ignoring specified R dependency: R (>= 2.8.0)
I: Using r-bioc-biocgenerics for Depends:BiocGenerics (>= 0.1.12)
I: Using r-bioc-biobase for Depends:Biobase (>= 2.5.5)
W: Cannot find a debian package for Suggests:tkWidgets (>= 1.19.0)
W: Cannot find a debian package for Suggests:affydata
W: Cannot find a debian package for Suggests:widgetTools
I: Using r-bioc-affyio for Imports:affyio (>= 1.13.3)
I: Using r-bioc-biocinstaller for Imports:BiocInstaller
I: Using r-bioc-preprocesscore for Imports:preprocessCore
   dh_install -a -O--buildsystem=R
   dh_installdocs -a -O--buildsystem=R
   dh_installchangelogs -a -O--buildsystem=R
   dh_installexamples -a -O--buildsystem=R
   dh_installman -a -O--buildsystem=R
   dh_installcatalogs -a -O--buildsystem=R
   dh_installcron -a -O--buildsystem=R
   dh_installdebconf -a -O--buildsystem=R
   dh_installemacsen -a -O--buildsystem=R
   dh_installifupdown -a -O--buildsystem=R
   dh_installinfo -a -O--buildsystem=R
   dh_installinit -a -O--buildsystem=R
   dh_installsystemd -a -O--buildsystem=R
   dh_installmenu -a -O--buildsystem=R
   dh_installmime -a -O--buildsystem=R
   dh_installmodules -a -O--buildsystem=R
   dh_installlogcheck -a -O--buildsystem=R
   dh_installlogrotate -a -O--buildsystem=R
   dh_installpam -a -O--buildsystem=R
   dh_installppp -a -O--buildsystem=R
   dh_installudev -a -O--buildsystem=R
   dh_installgsettings -a -O--buildsystem=R
   dh_bugfiles -a -O--buildsystem=R
   dh_ucf -a -O--buildsystem=R
   dh_lintian -a -O--buildsystem=R
   dh_gconf -a -O--buildsystem=R
   dh_icons -a -O--buildsystem=R
   dh_perl -a -O--buildsystem=R
   dh_usrlocal -a -O--buildsystem=R
   dh_link -a -O--buildsystem=R
   dh_installwm -a -O--buildsystem=R
   dh_installxfonts -a -O--buildsystem=R
   dh_strip_nondeterminism -a -O--buildsystem=R
   dh_compress -a -O--buildsystem=R
   dh_fixperms -a -O--buildsystem=R
   dh_missing -a -O--buildsystem=R
   dh_strip -a -O--buildsystem=R
   dh_makeshlibs -a -O--buildsystem=R
   dh_shlibdeps -a -O--buildsystem=R
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/r-bioc-affy/usr/lib/R/site-library/affy/libs/affy.so was not linked against libstdc++.so.6 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/r-bioc-affy/usr/lib/R/site-library/affy/libs/affy.so was not linked against libz.so.1 (it uses none of the library's symbols)
   dh_installdeb -a -O--buildsystem=R
   dh_gencontrol -a -O--buildsystem=R
   dh_md5sums -a -O--buildsystem=R
   dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-bioc-affy-dbgsym' in '../r-bioc-affy-dbgsym_1.58.0-2_armhf.deb'.
dpkg-deb: building package 'r-bioc-affy' in '../r-bioc-affy_1.58.0-2_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../r-bioc-affy_1.58.0-2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build r-bioc-affy-1.58.0
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-05-08T22:55:00Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


r-bioc-affy_1.58.0-2_armhf.changes:
-----------------------------------

Format: 1.8
Date: Sat, 05 May 2018 22:55:44 +0200
Source: r-bioc-affy
Binary: r-bioc-affy
Architecture: armhf
Version: 1.58.0-2
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 r-bioc-affy - BioConductor methods for Affymetrix Oligonucleotide Arrays
Changes:
 r-bioc-affy (1.58.0-2) unstable; urgency=medium
 .
   * Point Vcs-fields to Salsa
   * Maintainer: Debian R Packages Maintainers
     <r-pkg-team@alioth-lists.debian.net>
Checksums-Sha1:
 1f49c0a98ebb2bec58af6c7f209e0a7ce49be7db 30664 r-bioc-affy-dbgsym_1.58.0-2_armhf.deb
 edfb32f29e0e5ac5026c0df3f87c473622a1580b 7623 r-bioc-affy_1.58.0-2_armhf.buildinfo
 9eb88b23053d012479d4317d1ce97bc90657e3c1 1416744 r-bioc-affy_1.58.0-2_armhf.deb
Checksums-Sha256:
 cd6205ff67663a3390cd92f91ffd620e9d183c1d8adab0be37f908b671f88143 30664 r-bioc-affy-dbgsym_1.58.0-2_armhf.deb
 01a9d674449ea7d86457a9c79d0afb31d1c8ec1c1e5b4b15652530b45bbd09a3 7623 r-bioc-affy_1.58.0-2_armhf.buildinfo
 066cfda3e1042aea43770e1687131b8e36b7dfd9d708e0d5cad92ab31aa8e718 1416744 r-bioc-affy_1.58.0-2_armhf.deb
Files:
 c5e992346c5bae9cea44d1a48b2acf80 30664 debug optional r-bioc-affy-dbgsym_1.58.0-2_armhf.deb
 e2675c2ee55e26352e2936f56b62a7e5 7623 gnu-r optional r-bioc-affy_1.58.0-2_armhf.buildinfo
 faefc2cb7f6d8b88c3d85fb12abe4410 1416744 gnu-r optional r-bioc-affy_1.58.0-2_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


r-bioc-affy-dbgsym_1.58.0-2_armhf.deb
-------------------------------------

 new Debian package, version 2.0.
 size 30664 bytes: control archive=536 bytes.
     381 bytes,    12 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: r-bioc-affy-dbgsym
 Source: r-bioc-affy
 Version: 1.58.0-2
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
 Installed-Size: 50
 Depends: r-bioc-affy (= 1.58.0-2)
 Section: debug
 Priority: optional
 Description: debug symbols for r-bioc-affy
 Build-Ids: d80ea62f24210e758e5a348ae06068f3d097644e

drwxr-xr-x root/root         0 2018-05-05 20:55 ./
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/debug/
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/debug/.build-id/d8/
-rw-r--r-- root/root     40428 2018-05-05 20:55 ./usr/lib/debug/.build-id/d8/0ea62f24210e758e5a348ae06068f3d097644e.debug
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/share/
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/share/doc/
lrwxrwxrwx root/root         0 2018-05-05 20:55 ./usr/share/doc/r-bioc-affy-dbgsym -> r-bioc-affy


r-bioc-affy_1.58.0-2_armhf.deb
------------------------------

 new Debian package, version 2.0.
 size 1416744 bytes: control archive=2108 bytes.
     700 bytes,    12 lines      control              
    3932 bytes,    51 lines      md5sums              
 Package: r-bioc-affy
 Version: 1.58.0-2
 Architecture: armhf
 Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
 Installed-Size: 1754
 Depends: r-base-core (>= 3.4.4-1), r-api-3.4, r-bioc-biocgenerics (>= 0.1.12), r-bioc-biobase (>= 2.5.5), r-bioc-affyio (>= 1.13.3), r-bioc-biocinstaller, r-bioc-preprocesscore, libc6 (>= 2.4), libgcc1 (>= 1:3.5), libstdc++6 (>= 4.1.1), zlib1g (>= 1:1.1.4)
 Section: gnu-r
 Priority: optional
 Homepage: https://bioconductor.org/packages/affy/
 Description: BioConductor methods for Affymetrix Oligonucleotide Arrays
  This is part of the BioConductor GNU R suite.  The package contains
  functions for exploratory oligonucleotide array analysis.

drwxr-xr-x root/root         0 2018-05-05 20:55 ./
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/R/
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/R/site-library/
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/R/site-library/affy/
-rw-r--r-- root/root       710 2018-05-05 20:55 ./usr/lib/R/site-library/affy/CITATION
-rw-r--r-- root/root      2238 2018-05-05 20:55 ./usr/lib/R/site-library/affy/DESCRIPTION
-rw-r--r-- root/root      3465 2018-05-05 20:55 ./usr/lib/R/site-library/affy/INDEX
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/R/site-library/affy/Meta/
-rw-r--r-- root/root      3102 2018-05-05 20:55 ./usr/lib/R/site-library/affy/Meta/Rd.rds
-rw-r--r-- root/root       172 2018-05-05 20:55 ./usr/lib/R/site-library/affy/Meta/data.rds
-rw-r--r-- root/root        99 2018-05-05 20:55 ./usr/lib/R/site-library/affy/Meta/demo.rds
-rw-r--r-- root/root       112 2018-05-05 20:55 ./usr/lib/R/site-library/affy/Meta/features.rds
-rw-r--r-- root/root      3039 2018-05-05 20:55 ./usr/lib/R/site-library/affy/Meta/hsearch.rds
-rw-r--r-- root/root      1883 2018-05-05 20:55 ./usr/lib/R/site-library/affy/Meta/links.rds
-rw-r--r-- root/root      1114 2018-05-05 20:55 ./usr/lib/R/site-library/affy/Meta/nsInfo.rds
-rw-r--r-- root/root      1659 2018-05-05 20:55 ./usr/lib/R/site-library/affy/Meta/package.rds
-rw-r--r-- root/root       323 2018-05-05 20:55 ./usr/lib/R/site-library/affy/Meta/vignette.rds
-rw-r--r-- root/root      2202 2018-05-05 20:55 ./usr/lib/R/site-library/affy/NAMESPACE
-rw-r--r-- root/root      5434 2018-05-05 20:55 ./usr/lib/R/site-library/affy/NEWS
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/R/site-library/affy/R/
-rw-r--r-- root/root      1056 2018-05-05 20:55 ./usr/lib/R/site-library/affy/R/affy
-rw-r--r-- root/root    266947 2018-05-05 20:55 ./usr/lib/R/site-library/affy/R/affy.rdb
-rw-r--r-- root/root      3998 2018-05-05 20:55 ./usr/lib/R/site-library/affy/R/affy.rdx
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/R/site-library/affy/data/
-rw-r--r-- root/root      1654 2018-05-05 20:55 ./usr/lib/R/site-library/affy/data/SpikeIn.rda
-rw-r--r-- root/root     14133 2018-05-05 20:55 ./usr/lib/R/site-library/affy/data/cdfenv.example.rda
-rw-r--r-- root/root       215 2018-05-05 20:55 ./usr/lib/R/site-library/affy/data/mapCdfName.rda
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/R/site-library/affy/demo/
-rw-r--r-- root/root      3813 2018-05-05 20:55 ./usr/lib/R/site-library/affy/demo/affy.tour.R
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/
-rw-r--r-- root/root      8315 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/affy.R
-rw-r--r-- root/root     35600 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/affy.Rnw
-rw-r--r-- root/root    778145 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/affy.pdf
-rw-r--r-- root/root       954 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/builtinMethods.R
-rw-r--r-- root/root     10608 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/builtinMethods.Rnw
-rw-r--r-- root/root    157865 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/builtinMethods.pdf
-rw-r--r-- root/root      2349 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/customMethods.R
-rw-r--r-- root/root      6002 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/customMethods.Rnw
-rw-r--r-- root/root     90680 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/customMethods.pdf
-rw-r--r-- root/root      2696 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/index.html
-rw-r--r-- root/root       433 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/vim.R
-rw-r--r-- root/root      3478 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/vim.Rnw
-rw-r--r-- root/root    102947 2018-05-05 20:55 ./usr/lib/R/site-library/affy/doc/vim.pdf
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/R/site-library/affy/help/
-rw-r--r-- root/root      6696 2018-05-05 20:55 ./usr/lib/R/site-library/affy/help/AnIndex
-rw-r--r-- root/root    152110 2018-05-05 20:55 ./usr/lib/R/site-library/affy/help/affy.rdb
-rw-r--r-- root/root      1458 2018-05-05 20:55 ./usr/lib/R/site-library/affy/help/affy.rdx
-rw-r--r-- root/root      1773 2018-05-05 20:55 ./usr/lib/R/site-library/affy/help/aliases.rds
-rw-r--r-- root/root       681 2018-05-05 20:55 ./usr/lib/R/site-library/affy/help/paths.rds
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/R/site-library/affy/html/
-rw-r--r-- root/root     26958 2018-05-05 20:55 ./usr/lib/R/site-library/affy/html/00Index.html
-rw-r--r-- root/root      1335 2018-05-05 20:55 ./usr/lib/R/site-library/affy/html/R.css
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/R/site-library/affy/libs/
-rw-r--r-- root/root     30172 2018-05-05 20:55 ./usr/lib/R/site-library/affy/libs/affy.so
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/lib/R/site-library/affy/tests/
-rw-r--r-- root/root      1221 2018-05-05 20:55 ./usr/lib/R/site-library/affy/tests/affybatch.R
-rw-r--r-- root/root       210 2018-05-05 20:55 ./usr/lib/R/site-library/affy/tests/bg.correct.R
-rw-r--r-- root/root       800 2018-05-05 20:55 ./usr/lib/R/site-library/affy/tests/expression.values.R
-rw-r--r-- root/root       319 2018-05-05 20:55 ./usr/lib/R/site-library/affy/tests/normalize.methods.R
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/share/
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/share/doc/
drwxr-xr-x root/root         0 2018-05-05 20:55 ./usr/share/doc/r-bioc-affy/
-rw-r--r-- root/root       262 2018-05-05 20:55 ./usr/share/doc/r-bioc-affy/README.test
-rw-r--r-- root/root       782 2018-05-05 20:55 ./usr/share/doc/r-bioc-affy/changelog.Debian.gz
-rw-r--r-- root/root       948 2018-04-30 17:20 ./usr/share/doc/r-bioc-affy/changelog.gz
-rw-r--r-- root/root      5472 2018-05-05 20:55 ./usr/share/doc/r-bioc-affy/copyright
-rw-r--r-- root/root       458 2018-05-05 20:55 ./usr/share/doc/r-bioc-affy/run-unit-test


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 8380
Build-Time: 108
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 821
Job: r-bioc-affy_1.58.0-2
Machine Architecture: armhf
Package: r-bioc-affy
Package-Time: 982
Source-Version: 1.58.0-2
Space: 8380
Status: successful
Version: 1.58.0-2
--------------------------------------------------------------------------------
Finished at 2018-05-08T22:55:00Z
Build needed 00:16:22, 8380k disc space