Build log for python-sqt (0.8.0-3) on armhf

python-sqt → 0.8.0-3 → armhf → 2019-02-10 13:46:32

sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01

+==============================================================================+
| python-sqt 0.8.0-3 (armhf)                   Sun, 10 Feb 2019 13:38:37 +0000 |
+==============================================================================+

Package: python-sqt
Version: 0.8.0-3
Source Version: 0.8.0-3
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-a969d57b-e4c2-449c-b68b-ec3d499d3ec5' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.4 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [13.0 MB]
Fetched 24.4 MB in 9s (2632 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'python-sqt' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/python-sqt.git
Please use:
git clone https://salsa.debian.org/med-team/python-sqt.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 123 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main python-sqt 0.8.0-3 (dsc) [2136 B]
Get:2 http://172.17.0.1/private buster-staging/main python-sqt 0.8.0-3 (tar) [116 kB]
Get:3 http://172.17.0.1/private buster-staging/main python-sqt 0.8.0-3 (diff) [4828 B]
Fetched 123 kB in 0s (926 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/python-sqt-84tXBX/python-sqt-0.8.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/python-sqt-84tXBX' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-d02CPR/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-d02CPR/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-d02CPR/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-d02CPR/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-d02CPR/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-d02CPR/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-d02CPR/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-d02CPR/apt_archive ./ Packages [434 B]
Fetched 2110 B in 0s (11.0 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales libexpat1
  libgpg-error-l10n libgssapi-krb5-2 libk5crypto3 libkeyutils1 libkrb5-3
  libkrb5support0 libnss-systemd libpam-systemd libssl1.1 openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 53 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-d02CPR/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15817 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper (>= 12~), dh-python, python3-all, python3-dev, python3-setuptools, cython3, python3-nose, python3-cutadapt, python3-pysam, python3-seaborn, python3-xopen
Filtered Build-Depends: debhelper (>= 12~), dh-python, python3-all, python3-dev, python3-setuptools, cython3, python3-nose, python3-cutadapt, python3-pysam, python3-seaborn, python3-xopen
dpkg-deb: building package 'sbuild-build-depends-python-sqt-dummy' in '/<<BUILDDIR>>/resolver-d02CPR/apt_archive/sbuild-build-depends-python-sqt-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-python-sqt-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-d02CPR/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-d02CPR/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-d02CPR/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-d02CPR/apt_archive ./ Sources [549 B]
Get:5 copy:/<<BUILDDIR>>/resolver-d02CPR/apt_archive ./ Packages [632 B]
Fetched 2514 B in 0s (12.3 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install python-sqt build dependencies (apt-based resolver)
----------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales
  libgpg-error-l10n libnss-systemd libpam-systemd openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev blt bsdmainutils cpp-8 cython3
  debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file
  fontconfig-config fonts-lyx g++-8 gcc-8 gcc-8-base gettext gettext-base
  groff-base intltool-debian libarchive-zip-perl libasan5 libatomic1 libblas3
  libbsd0 libcc1-0 libcroco3 libcurl3-gnutls libelf1 libexpat1-dev
  libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgcc-8-dev
  libgcc1 libgfortran5 libglib2.0-0 libgomp1 libhts2 libicu63 libjs-jquery
  libjs-jquery-ui liblapack3 libmagic-mgc libmagic1 libmpdec2 libnghttp2-14
  libpipeline1 libpsl5 libpython3-dev libpython3-stdlib libpython3.7
  libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib librtmp1
  libsigsegv2 libssh2-1 libstdc++-8-dev libstdc++6 libtcl8.6 libtk8.6 libtool
  libubsan1 libuchardet0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6
  libxext6 libxft2 libxml2 libxrender1 libxss1 m4 man-db mime-support
  po-debconf python-matplotlib-data python3 python3-all python3-cutadapt
  python3-cycler python3-dateutil python3-decorator python3-dev
  python3-distutils python3-kiwisolver python3-lib2to3 python3-matplotlib
  python3-minimal python3-nose python3-numpy python3-pandas python3-pandas-lib
  python3-pkg-resources python3-pyparsing python3-pysam python3-scipy
  python3-seaborn python3-setuptools python3-six python3-tk python3-tz
  python3-xopen python3.7 python3.7-dev python3.7-minimal tk8.6-blt2.5
  ttf-bitstream-vera ucf x11-common
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc blt-demo wamerican | wordlist
  whois vacation gcc-8-locales cython-doc dh-make gcc-8-doc libstdc++6-8-dbg
  libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg libasan5-dbg
  liblsan0-dbg libtsan0-dbg libubsan1-dbg libmpx2-dbg libquadmath0-dbg
  gettext-doc libasprintf-dev libgettextpo-dev groff libjs-jquery-ui-docs
  libstdc++-8-doc tcl8.6 tk8.6 libtool-doc gfortran | fortran95-compiler
  gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc
  python3-venv python-cycler-doc dvipng ffmpeg gir1.2-gtk-3.0 ghostscript
  inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi
  python3-gi python3-gi-cairo python3-gobject python3-pyqt4 python3-sip
  python3-tornado texlive-extra-utils texlive-latex-extra ttf-staypuft
  python-nose-doc gfortran python-numpy-doc python3-pytest python3-numpy-dbg
  python-pandas-doc python-pyparsing-doc python-scipy-doc
  python-setuptools-doc tix python3-tk-dbg python3.7-venv python3.7-doc
  binfmt-support
Recommended packages:
  curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
  xdg-user-dirs javascript-common publicsuffix libltdl-dev
  libmail-sendmail-perl python3-pil python3-numexpr python3-tables python3-bs4
  python3-html5lib python3-lxml python3-patsy
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev blt bsdmainutils cython3 debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dwz file fontconfig-config
  fonts-lyx gettext gettext-base groff-base intltool-debian
  libarchive-zip-perl libblas3 libbsd0 libcroco3 libcurl3-gnutls libelf1
  libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6
  libgfortran5 libglib2.0-0 libhts2 libicu63 libjs-jquery libjs-jquery-ui
  liblapack3 libmagic-mgc libmagic1 libmpdec2 libnghttp2-14 libpipeline1
  libpsl5 libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev
  libpython3.7-minimal libpython3.7-stdlib librtmp1 libsigsegv2 libssh2-1
  libtcl8.6 libtk8.6 libtool libuchardet0 libx11-6 libx11-data libxau6 libxcb1
  libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 m4 man-db
  mime-support po-debconf python-matplotlib-data python3 python3-all
  python3-cutadapt python3-cycler python3-dateutil python3-decorator
  python3-dev python3-distutils python3-kiwisolver python3-lib2to3
  python3-matplotlib python3-minimal python3-nose python3-numpy python3-pandas
  python3-pandas-lib python3-pkg-resources python3-pyparsing python3-pysam
  python3-scipy python3-seaborn python3-setuptools python3-six python3-tk
  python3-tz python3-xopen python3.7 python3.7-dev python3.7-minimal
  sbuild-build-depends-python-sqt-dummy tk8.6-blt2.5 ttf-bitstream-vera ucf
  x11-common
The following packages will be upgraded:
  cpp-8 g++-8 gcc-8 gcc-8-base libasan5 libatomic1 libcc1-0 libgcc-8-dev
  libgcc1 libgomp1 libstdc++-8-dev libstdc++6 libubsan1
13 upgraded, 104 newly installed, 0 to remove and 40 not upgraded.
Need to get 139 MB/140 MB of archives.
After this operation, 351 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-d02CPR/apt_archive ./ sbuild-build-depends-python-sqt-dummy 0.invalid.0 [912 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libcc1-0 armhf 8.2.0-15+rpi1 [37.9 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf gcc-8-base armhf 8.2.0-15+rpi1 [189 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libgcc1 armhf 1:8.2.0-15+rpi1 [36.6 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libgomp1 armhf 8.2.0-15+rpi1 [64.3 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libatomic1 armhf 8.2.0-15+rpi1 [8104 B]
Get:9 http://172.17.0.1/private buster-staging/main armhf libasan5 armhf 8.2.0-15+rpi1 [318 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libubsan1 armhf 8.2.0-15+rpi1 [104 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf g++-8 armhf 8.2.0-15+rpi1 [7459 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libstdc++-8-dev armhf 8.2.0-15+rpi1 [1568 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libgcc-8-dev armhf 8.2.0-15+rpi1 [3750 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf gcc-8 armhf 8.2.0-15+rpi1 [7213 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf cpp-8 armhf 8.2.0-15+rpi1 [6788 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libstdc++6 armhf 8.2.0-15+rpi1 [325 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.4-2 [782 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.1-1 [26.6 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.5-1 [1231 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libpython3.7-minimal armhf 3.7.2-2 [582 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf python3.7-minimal armhf 3.7.2-2 [1455 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf python3-minimal armhf 3.7.2-1 [36.6 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.61 [37.1 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libpython3.7-stdlib armhf 3.7.2-2 [1662 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf python3.7 armhf 3.7.2-2 [323 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.7.2-1 [20.0 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.7.2-1 [61.5 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.35-2 [242 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.35-2 [109 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.35-2 [65.1 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libtcl8.6 armhf 8.6.9+dfsg-1 [878 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.9.1-3 [318 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf ttf-bitstream-vera all 1.10-8 [352 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.7-1 [298 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.7-1 [689 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libtk8.6 armhf 8.6.9-1 [666 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-4 [468 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf blt armhf 2.5.3+dfsg-4 [14.8 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf cython3 armhf 0.29.2-2 [1299 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-9 [547 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 1.1.0-1 [19.5 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 1.1.0-1 [12.6 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.175-2 [157 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-3 [66.0 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.3-1 [1077 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-6 [7973 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-3 [132 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf debhelper all 12 [1002 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf python3-lib2to3 all 3.7.2-3 [76.7 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf python3-distutils all 3.7.2-3 [142 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf dh-python all 3.20180927 [95.8 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf fonts-lyx all 2.3.2-1 [199 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libgfortran5 armhf 8.2.0-15+rpi1 [206 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-2 [103 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.36.0-2 [73.6 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [54.0 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-2 [125 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libcurl3-gnutls armhf 7.63.0-1 [288 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libexpat1-dev armhf 2.2.6-1 [127 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libhts2 armhf 1.9-8 [254 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libjs-jquery all 3.3.1~dfsg-1 [332 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.8.0-2 [1493 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libpython3.7 armhf 3.7.2-2 [1252 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libpython3.7-dev armhf 3.7.2-2 [47.2 MB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libpython3-dev armhf 3.7.2-1 [20.1 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf python-matplotlib-data all 3.0.2-2 [4138 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf python3-all armhf 3.7.2-1 [1060 B]
Get:91 http://172.17.0.1/private buster-staging/main armhf python3-xopen all 0.3.3-1 [6748 B]
Get:92 http://172.17.0.1/private buster-staging/main armhf python3-cutadapt armhf 1.18-1+b1 [160 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf python3-six all 1.12.0-1 [15.7 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf python3-cycler all 0.10.0-1 [7556 B]
Get:95 http://172.17.0.1/private buster-staging/main armhf python3-dateutil all 2.7.3-3 [64.5 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf python3-decorator all 4.3.0-1.1 [14.5 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf python3.7-dev armhf 3.7.2-2 [510 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf python3-dev armhf 3.7.2-1 [1260 B]
Get:99 http://172.17.0.1/private buster-staging/main armhf python3-pkg-resources all 40.7.1-1 [152 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf python3-kiwisolver armhf 1.0.1-2+b1 [53.3 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf python3-pyparsing all 2.2.0+dfsg1-2 [89.6 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf python3-numpy armhf 1:1.16.1-1 [1874 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf python3-matplotlib armhf 3.0.2-2 [5282 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf python3-nose all 1.3.7-4 [132 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf python3-tz all 2018.9-1 [27.0 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf python3-pandas-lib armhf 0.23.3-1+b1 [4582 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf python3-pandas all 0.23.3-1 [1743 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf python3-pysam armhf 0.15.1+ds-1+rpi1 [1440 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf python3-scipy armhf 1.1.0-2 [10.1 MB]
Get:110 http://172.17.0.1/private buster-staging/main armhf python3-tk armhf 3.7.2-3 [94.2 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf python3-seaborn all 0.9.0-1 [158 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf python3-setuptools all 40.7.1-1 [305 kB]
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Setting up cpp-8 (8.2.0-15+rpi1) ...
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Setting up m4 (1.4.18-2) ...
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Setting up libcroco3:armhf (0.6.12-3) ...
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Setting up dwz (0.12-3) ...
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Processing triggers for systemd (240-4+rpi1) ...
Setting up libexpat1-dev:armhf (2.2.6-1) ...
Setting up ttf-bitstream-vera (1.10-8) ...
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Setting up bsdmainutils (11.1.2) ...
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Setting up autopoint (0.19.8.1-9) ...
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Setting up fonts-lyx (2.3.2-1) ...
Setting up libfile-stripnondeterminism-perl (1.1.0-1) ...
Setting up libubsan1:armhf (8.2.0-15+rpi1) ...
Setting up libpython3.7-stdlib:armhf (3.7.2-2) ...
Setting up fontconfig-config (2.13.1-2) ...
Installing new version of config file /etc/fonts/fonts.conf ...
Setting up python-matplotlib-data (3.0.2-2) ...
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libpython3.7:armhf (3.7.2-2) ...
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Setting up libpython3.7-dev:armhf (3.7.2-2) ...
Setting up man-db (2.8.5-1) ...
Not building database; man-db/auto-update is not 'true'.
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Setting up libgcc-8-dev:armhf (8.2.0-15+rpi1) ...
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Setting up po-debconf (1.0.21) ...
Setting up python3 (3.7.2-1) ...
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up python3-six (1.12.0-1) ...
Setting up libx11-6:armhf (2:1.6.7-1) ...
Setting up python3-pyparsing (2.2.0+dfsg1-2) ...
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Setting up python3-pkg-resources (40.7.1-1) ...
Setting up python3.7-dev (3.7.2-2) ...
Setting up python3-xopen (0.3.3-1) ...
Setting up gcc-8 (8.2.0-15+rpi1) ...
Setting up g++-8 (8.2.0-15+rpi1) ...
Setting up python3-cutadapt (1.18-1+b1) ...
Setting up python3-pysam (0.15.1+ds-1+rpi1) ...
Setting up python3-nose (1.3.7-4) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up cython3 (0.29.2-2) ...
Setting up libxft2:armhf (2.3.2-2) ...
Setting up python3-lib2to3 (3.7.2-3) ...
Setting up python3-decorator (4.3.0-1.1) ...
Setting up python3-tz (2018.9-1) ...
Setting up python3-distutils (3.7.2-3) ...
Setting up python3-dateutil (2.7.3-3) ...
Setting up python3-kiwisolver (1.0.1-2+b1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up python3-numpy (1:1.16.1-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up python3-pandas-lib (0.23.3-1+b1) ...
Setting up python3-pandas (0.23.3-1) ...
Setting up python3-setuptools (40.7.1-1) ...
Setting up python3-matplotlib (3.0.2-2) ...
Setting up dh-python (3.20180927) ...
Setting up python3-scipy (1.1.0-2) ...
Setting up libtk8.6:armhf (8.6.9-1) ...
Setting up python3-dev (3.7.2-1) ...
Setting up tk8.6-blt2.5 (2.5.3+dfsg-4) ...
Setting up python3-all (3.7.2-1) ...
Setting up blt (2.5.3+dfsg-4) ...
Setting up python3-tk:armhf (3.7.2-3) ...
Setting up python3-seaborn (0.9.0-1) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (12) ...
Setting up sbuild-build-depends-python-sqt-dummy (0.invalid.0) ...
Setting up dh-strip-nondeterminism (1.1.0-1) ...
Processing triggers for libc-bin (2.28-5+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.4.0-124-generic armhf (armv8l)
Toolchain package versions: binutils_2.31.1-11+rpi1 dpkg-dev_1.19.2 g++-8_8.2.0-15+rpi1 gcc-8_8.2.0-15+rpi1 libc6-dev_2.28-5+rpi1 libstdc++-8-dev_8.2.0-15+rpi1 libstdc++6_8.2.0-15+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 apt_1.8.0~beta1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_5.0-2 binutils_2.31.1-11+rpi1 binutils-arm-linux-gnueabihf_2.31.1-11+rpi1 binutils-common_2.31.1-11+rpi1 blt_2.5.3+dfsg-4 bsdmainutils_11.1.2 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20170717 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-15+rpi1 cython3_0.29.2-2 dash_0.5.10.2-5 dbus_1.12.12-1 dbus-user-session_1.12.12-1 debconf_1.5.70 debhelper_12 debianutils_4.8.6.1 dh-autoreconf_19 dh-python_3.20180927 dh-strip-nondeterminism_1.1.0-1 diffutils_1:3.6-1 dirmngr_2.2.12-1+rpi1 dmsetup_2:1.02.155-1 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 e2fsprogs-l10n_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-2 findutils_4.6.0+git+20190105-2 fontconfig-config_2.13.1-2 fonts-lyx_2.3.2-1 g++_4:8.2.0-2+rpi1 g++-8_8.2.0-15+rpi1 gcc_4:8.2.0-2+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-8_8.2.0-15+rpi1 gcc-8-base_8.2.0-15+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gnupg_2.2.12-1+rpi1 gnupg-agent_2.2.12-1+rpi1 gnupg-l10n_2.2.12-1+rpi1 gnupg-utils_2.2.12-1+rpi1 gpg_2.2.12-1+rpi1 gpg-agent_2.2.12-1+rpi1 gpg-wks-client_2.2.12-1+rpi1 gpg-wks-server_2.2.12-1+rpi1 gpgconf_2.2.12-1+rpi1 gpgsm_2.2.12-1+rpi1 gpgv_2.2.12-1+rpi1 grep_3.3-1 groff-base_1.22.4-2 gzip_1.9-3 hostname_3.21 inetutils-ping_2:1.9.4-5 init-system-helpers_1.56+nmu1 initramfs-tools_0.132 initramfs-tools-core_0.132 intltool-debian_0.35.0+20060710.5 klibc-utils_2.0.4-15+rpi1 kmod_25-2 krb5-locales_1.17-1 libacl1_2.2.52-3 libapparmor1_2.13.2-3 libapt-pkg5.0_1.8.0~beta1 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.1 libasan5_8.2.0-15+rpi1 libassuan0_2.5.2-1 libatomic1_8.2.0-15+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2+b1 libbinutils_2.31.1-11+rpi1 libblas3_3.8.0-2 libblkid1_2.33.1-0.1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-5+rpi1 libc-dev-bin_2.28-5+rpi1 libc6_2.28-5+rpi1 libc6-dev_2.28-5+rpi1 libcap-ng0_0.7.9-2 libcap2_1:2.25-1.2 libcc1-0_8.2.0-15+rpi1 libcom-err2_1.44.5-1 libcroco3_0.6.12-3 libcryptsetup12_2:2.0.6-1 libcryptsetup4_2:1.7.5-1 libcurl3-gnutls_7.63.0-1 libdb5.3_5.3.28+dfsg1-0.2 libdbus-1-3_1.12.12-1 libdebconfclient0_0.246 libdevmapper1.02.1_2:1.02.155-1 libdpkg-perl_1.19.2 libdrm-common_2.4.95-1+rpi1 libdrm2_2.4.95-1+rpi1 libelf1_0.175-2 libexpat1_2.2.6-1 libexpat1-dev_2.2.6-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.1.0-1 libfontconfig1_2.13.1-2 libfreetype6_2.9.1-3 libgcc-8-dev_8.2.0-15+rpi1 libgcc1_1:8.2.0-15+rpi1 libgcrypt20_1.8.4-4 libgdbm-compat4_1.18.1-2 libgdbm3_1.8.3-14 libgdbm6_1.18.1-2 libgfortran5_8.2.0-15+rpi1 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.5-2+rpi1 libgomp1_8.2.0-15+rpi1 libgpg-error-l10n_1.33-3 libgpg-error0_1.33-3 libgssapi-krb5-2_1.17-1 libhogweed4_3.4.1~rc1-1 libhts2_1.9-8 libicu63_63.1-6 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libip4tc0_1.8.2-3 libisl19_0.20-2 libjs-jquery_3.3.1~dfsg-1 libjs-jquery-ui_1.12.1+dfsg-5 libjson-c3_0.12.1-1.3 libk5crypto3_1.17-1 libkeyutils1_1.5.9-9.3 libklibc_2.0.4-15+rpi1 libkmod2_25-2 libkrb5-3_1.17-1 libkrb5support0_1.17-1 libksba8_1.3.5-2 liblapack3_3.8.0-2 libldap-2.4-2_2.4.47+dfsg-2 libldap-common_2.4.47+dfsg-2 liblz4-1_1.8.3-1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.35-2 libmagic1_1:5.35-2 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2~rc1-1 libncurses5_6.1+20181013-1 libncurses6_6.1+20181013-1 libncursesw5_6.1+20181013-1 libncursesw6_6.1+20181013-1 libnettle6_3.4.1~rc1-1 libnghttp2-14_1.36.0-2 libnpth0_1.6-1 libnss-systemd_240-4+rpi1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-4 libpam-modules-bin_1.1.8-4 libpam-runtime_1.1.8-4 libpam-systemd_240-4+rpi1 libpam0g_1.1.8-4 libpcre3_2:8.39-11+rpi1 libperl5.24_5.24.1-7 libperl5.28_5.28.1-3 libpipeline1_1.5.1-1 libplymouth4_0.9.4-1 libpng16-16_1.6.36-2 libprocps7_2:3.3.15-2 libpsl5_0.20.2-2 libpython3-dev_3.7.2-1 libpython3-stdlib_3.7.2-1 libpython3.7_3.7.2-2 libpython3.7-dev_3.7.2-2 libpython3.7-minimal_3.7.2-2 libpython3.7-stdlib_3.7.2-2 libreadline7_7.0-5 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-3+b1 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libsqlite3-0_3.26.0+fossilbc891ac6b-1 libss2_1.44.5-1 libssh2-1_1.8.0-2 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-15+rpi1 libstdc++6_8.2.0-15+rpi1 libsystemd0_240-4+rpi1 libtasn1-6_4.13-3 libtcl8.6_8.6.9+dfsg-1 libtinfo5_6.1+20181013-1 libtinfo6_6.1+20181013-1 libtk8.6_8.6.9-1 libtool_2.4.6-9 libubsan1_8.2.0-15+rpi1 libuchardet0_0.0.6-3 libudev1_240-4+rpi1 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.33.1-0.1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxau6_1:1.0.8-1+b2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-2 libxml2_2.9.4+dfsg1-7+b1 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libzstd1_1.3.8+dfsg-3+rpi1 linux-base_4.5 linux-libc-dev_4.18.20-2+rpi1 login_1:4.5-1.1 lsb-base_10.2018112800+rpi1 m4_1.4.18-2 make_4.2.1-1.2 makedev_2.3.1-94 man-db_2.8.5-1 mawk_1.3.3-17 mime-support_3.61 mount_2.33.1-0.1 multiarch-support_2.28-5+rpi1 nano_3.2-1 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 netbase_5.5 openssl_1.1.1a-1 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-3 perl-base_5.28.1-3 perl-modules-5.24_5.24.1-7 perl-modules-5.28_5.28.1-3 pinentry-curses_1.1.0-1 plymouth_0.9.4-1 po-debconf_1.0.21 procps_2:3.3.15-2 python-matplotlib-data_3.0.2-2 python3_3.7.2-1 python3-all_3.7.2-1 python3-cutadapt_1.18-1+b1 python3-cycler_0.10.0-1 python3-dateutil_2.7.3-3 python3-decorator_4.3.0-1.1 python3-dev_3.7.2-1 python3-distutils_3.7.2-3 python3-kiwisolver_1.0.1-2+b1 python3-lib2to3_3.7.2-3 python3-matplotlib_3.0.2-2 python3-minimal_3.7.2-1 python3-nose_1.3.7-4 python3-numpy_1:1.16.1-1 python3-pandas_0.23.3-1 python3-pandas-lib_0.23.3-1+b1 python3-pkg-resources_40.7.1-1 python3-pyparsing_2.2.0+dfsg1-2 python3-pysam_0.15.1+ds-1+rpi1 python3-scipy_1.1.0-2 python3-seaborn_0.9.0-1 python3-setuptools_40.7.1-1 python3-six_1.12.0-1 python3-tk_3.7.2-3 python3-tz_2018.9-1 python3-xopen_0.3.3-1 python3.7_3.7.2-2 python3.7-dev_3.7.2-2 python3.7-minimal_3.7.2-2 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-sqt-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_240-4+rpi1 systemd-sysv_240-4+rpi1 sysvinit-utils_2.93-5 tar_1.30+dfsg-4 tk8.6-blt2.5_2.5.3+dfsg-4 ttf-bitstream-vera_1.10-8 tzdata_2018i-1 ucf_3.0038+nmu1 udev_240-4+rpi1 util-linux_2.33.1-0.1 x11-common_1:7.7+19 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Mon Feb  4 08:21:22 2019 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./python-sqt_0.8.0-3.dsc
dpkg-source: info: extracting python-sqt in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking python-sqt_0.8.0.orig.tar.gz
dpkg-source: info: unpacking python-sqt_0.8.0-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying fixme_ignore_failing_test.patch
dpkg-source: info: applying fixme_ignore_failing_test2.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-a969d57b-e4c2-449c-b68b-ec3d499d3ec5
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package python-sqt
dpkg-buildpackage: info: source version 0.8.0-3
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
dpkg-source: info: using options from python-sqt-0.8.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/
 fakeroot debian/rules clean
dh clean --with python3 --buildsystem=pybuild
   dh_auto_clean -O--buildsystem=pybuild
	pybuild --clean --test-nose -i python{version} -p 3.7
I: pybuild base:217: python3.7 setup.py clean 
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.7' does not exist -- can't clean it
	rm -rf .pybuild/
	find . -name \*.pyc -exec rm {} \;
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
	rm -f debian/debhelper-build-stamp
	rm -rf debian/.debhelper/
	rm -f -- debian/python3-sqt.substvars debian/files
	rm -fr -- debian/python3-sqt/ debian/tmp/
	find .  \( \( \
		\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} + \) -o \
		\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
 debian/rules build-arch
dh build-arch --with python3 --buildsystem=pybuild
   dh_update_autotools_config -a -O--buildsystem=pybuild
   dh_autoreconf -a -O--buildsystem=pybuild
   dh_auto_configure -a -O--buildsystem=pybuild
	pybuild --configure --test-nose -i python{version} -p 3.7
I: pybuild base:217: python3.7 setup.py config 
running config
   dh_auto_build -a -O--buildsystem=pybuild
	pybuild --build --test-nose -i python{version} -p 3.7
I: pybuild base:217: /usr/bin/python3 setup.py build 
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/compat.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/args.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/colorspace.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/region.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/ansicolor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/intervaltree.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/dna.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/align.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/qualtrim.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/_codons.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/cigar.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/reads.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/math.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
copying sqt/_version.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io
copying sqt/io/gtf.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io
copying sqt/io/fasta.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io
copying sqt/io/bam.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io
copying sqt/io/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io
copying sqt/io/sff.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/checkfastqpe.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/bam2fastq.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/fastastats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/translate.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/fastagrep.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/readlenhisto.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/coverage.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/compare_sequences.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/align.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/fastxmod.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/fastaextract.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/samfixn.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/mutate.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/randomseq.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/chars.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/bameof.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/fixbam64.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/samsetop.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/qualityguess.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/checkvcfref.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/cutvect.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/qgramfreq.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/simreads.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/addadapt.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/bamstats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/histogram.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
copying sqt/commands/readcov.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands
UPDATING /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py
set /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py to '0.8.0'
running build_ext
Compiling sqt/_helpers.pyx because it changed.
[1/1] Cythonizing sqt/_helpers.pyx
building 'sqt._helpers' extension
creating build
creating build/temp.linux-armhf-3.7
creating build/temp.linux-armhf-3.7/sqt
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c sqt/_helpers.c -o build/temp.linux-armhf-3.7/sqt/_helpers.o
sqt/_helpers.c: In function ‘__pyx_pf_3sqt_8_helpers_12nt_to_aa’:
sqt/_helpers.c:6524:40: warning: array subscript has type ‘char’ [-Wchar-subscripts]
     __pyx_v_nt0 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[__pyx_v_i])]);
                                        ^
sqt/_helpers.c:6533:40: warning: array subscript has type ‘char’ [-Wchar-subscripts]
     __pyx_v_nt1 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 1)])]);
                                        ^
sqt/_helpers.c:6542:40: warning: array subscript has type ‘char’ [-Wchar-subscripts]
     __pyx_v_nt2 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 2)])]);
                                        ^
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/sqt/_helpers.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/sqt/_helpers.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
LC_ALL=C.UTF-8 dh_auto_test
	pybuild --test --test-nose -i python{version} -p 3.7
I: pybuild base:217: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build; python3.7 -m nose -v tests
tests.testalign.test_edit_distance ... ok
tests.testalign.test_edit_distance_bytes ... ok
tests.testalign.test_edit_distance_banded ... ok
tests.testalign.test_global_alignment ... ok
tests.testalign.test_consensus ... ok
tests.testalign.test_hamming_distance ... ok
tests.testalign.test_hamming_distance_incorrect_length ... ok
tests.testcigar.test_parse ... ok
tests.testcigar.test_cigar_class ... ok
tests.testcigar.test_parse_error_1 ... ok
tests.testcigar.test_parse_error_2 ... ok
tests.testcigar.test_parse_error_3 ... ok
tests.testcigar.test_elements ... ok
tests.testcigar.test_length ... ok
tests.testcigar.test_concat ... ok
tests.testcigar.test_split_at_element ... ok
tests.testcigar.test_reference_to_query_position ... ok
tests.testcigar.test_clipping ... ok
tests.testcolorspace.test_encode ... ok
tests.testcolorspace.test_decode ... ok
tests.testdna.test_complement_string ... ok
tests.testdna.test_complement_bytes ... ok
tests.testdna.test_n_intervals ... ok
tests.testdna.test_intervals_complement ... ok
tests.testdna.test_amino_acid_regex ... ok
tests.testdna.test_nt_to_aa ... ok
tests.testfasta.test_fastqwriter ... ok
tests.testfasta.test_fastqwriter_twoheaders ... ok
tests.testfasta.test_fastawriter ... ok
tests.testfasta.test_fastawriter_linelength ... ok
tests.testfasta.test_fastawriter_sequence ... ok
tests.testfasta.test_fastawriter_contextmanager ... ok
tests.testfasta.test_fastareader ... ok
tests.testfasta.test_fastareader_upper ... ok
tests.testfasta.test_fastareader_lower ... ok
tests.testfasta.test_fastareader_binary ... ok
tests.testfasta.test_sequence_reader ... ok
tests.testfasta.test_fastareader_contextmanager ... ok
tests.testfasta.test_fastq_header ... ok
tests.testindexedfasta.test_indexedfasta_contextmanager ... ok
tests.testindexedfasta.test_indexedfasta ... ok
tests.testindexedfasta.test_all_regions ... ok
tests.testintervaltree.test_intervaltree ... ok
tests.testmedian.test_median ... ok
tests.testregion.test_region ... ok

----------------------------------------------------------------------
Ran 45 tests in 35.971s

OK
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   create-stamp debian/debhelper-build-stamp
 fakeroot debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=pybuild
   dh_testroot -a -O--buildsystem=pybuild
   dh_prep -a -O--buildsystem=pybuild
	rm -f -- debian/python3-sqt.substvars
	rm -fr -- debian/.debhelper/generated/python3-sqt/ debian/python3-sqt/ debian/tmp/
   dh_auto_install -a -O--buildsystem=pybuild
	install -d /<<PKGBUILDDIR>>/debian/python3-sqt
	pybuild --install --test-nose -i python{version} -p 3.7 --dest-dir /<<PKGBUILDDIR>>/debian/python3-sqt
I: pybuild base:217: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-sqt 
running install
running build
running build_py
UPDATING /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py
set /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py to '0.8.0'
running build_ext
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/compat.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/args.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/colorspace.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/region.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/ansicolor.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/intervaltree.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/dna.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/align.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/qualtrim.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/_codons.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/checkfastqpe.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/bam2fastq.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fastastats.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/translate.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fastagrep.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/readlenhisto.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/coverage.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/compare_sequences.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/align.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fastxmod.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fastaextract.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/samfixn.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/mutate.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/randomseq.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/chars.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/bameof.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fixbam64.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/samsetop.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/qualityguess.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/checkvcfref.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/cutvect.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/qgramfreq.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/simreads.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/addadapt.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/bamstats.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/histogram.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/readcov.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/utils.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/cigar.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/reads.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/_codons.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/compat.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/align.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/region.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/dna.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/math.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/__init__.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/utils.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/cigar.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/_version.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/colorspace.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/args.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/intervaltree.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io/gtf.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io/fasta.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io/bam.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io/sff.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io/__pycache__/fasta.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io/__pycache__/gtf.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/io/__pycache__/__init__.cpython-37.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/math.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/__main__.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/compat.py to compat.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/args.py to args.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/colorspace.py to colorspace.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/region.py to region.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/ansicolor.py to ansicolor.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/intervaltree.py to intervaltree.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/dna.py to dna.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/align.py to align.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/qualtrim.py to qualtrim.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/_codons.py to _codons.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/checkfastqpe.py to checkfastqpe.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/bam2fastq.py to bam2fastq.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fastastats.py to fastastats.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/translate.py to translate.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fastagrep.py to fastagrep.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/readlenhisto.py to readlenhisto.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/coverage.py to coverage.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/compare_sequences.py to compare_sequences.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/align.py to align.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fastxmod.py to fastxmod.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fastaextract.py to fastaextract.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/samfixn.py to samfixn.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/mutate.py to mutate.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/randomseq.py to randomseq.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/chars.py to chars.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/bameof.py to bameof.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fixbam64.py to fixbam64.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/samsetop.py to samsetop.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/qualityguess.py to qualityguess.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/checkvcfref.py to checkvcfref.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/cutvect.py to cutvect.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/__init__.py to __init__.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/qgramfreq.py to qgramfreq.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/simreads.py to simreads.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/addadapt.py to addadapt.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/bamstats.py to bamstats.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/histogram.py to histogram.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/readcov.py to readcov.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/utils.py to utils.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__init__.py to __init__.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/cigar.py to cigar.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/reads.py to reads.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/gtf.py to gtf.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/fasta.py to fasta.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/bam.py to bam.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__init__.py to __init__.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/sff.py to sff.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/math.py to math.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__main__.py to __main__.cpython-37.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/_version.py to _version.cpython-37.pyc
running install_egg_info
running egg_info
creating sqt.egg-info
writing sqt.egg-info/PKG-INFO
writing dependency_links to sqt.egg-info/dependency_links.txt
writing entry points to sqt.egg-info/entry_points.txt
writing requirements to sqt.egg-info/requires.txt
writing top-level names to sqt.egg-info/top_level.txt
writing manifest file 'sqt.egg-info/SOURCES.txt'
reading manifest file 'sqt.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'sqt.egg-info/SOURCES.txt'
Copying sqt.egg-info to /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt-0.8.0.egg-info
Skipping SOURCES.txt
running install_scripts
Installing sqt script to /<<PKGBUILDDIR>>/debian/python3-sqt/usr/bin
   dh_installdocs -a -O--buildsystem=pybuild
	install -d debian/python3-sqt/usr/share/doc/python3-sqt
	install -d debian/.debhelper/generated/python3-sqt
	install -p -m0644 debian/README.Debian debian/python3-sqt/usr/share/doc/python3-sqt/README.Debian
	install -p -m0644 debian/copyright debian/python3-sqt/usr/share/doc/python3-sqt/copyright
   dh_installchangelogs -a -O--buildsystem=pybuild
	install -p -m0644 debian/changelog debian/python3-sqt/usr/share/doc/python3-sqt/changelog.Debian
   dh_installman -a -O--buildsystem=pybuild
	install -d debian/python3-sqt/usr/share/man/man1/
	install -p -m0644 ./debian/sqt.1 debian/python3-sqt/usr/share/man/man1/sqt.1
	man -l --recode UTF-8 ./debian/python3-sqt/usr/share/man/man1/sqt.1 > debian/python3-sqt/usr/share/man/man1/sqt.1.dh-new
	mv debian/python3-sqt/usr/share/man/man1/sqt.1.dh-new debian/python3-sqt/usr/share/man/man1/sqt.1
	chmod 0644 -- debian/python3-sqt/usr/share/man/man1/sqt.1
   dh_python3 -a -O--buildsystem=pybuild
D: dh_python3 dh_python3:161: version: 3.20180927
D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-a', '-O--buildsystem=pybuild']
D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': True, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'}
D: dh_python3 dh_python3:164: args: []
D: dh_python3 dh_python3:166: supported Python versions: 3.7 (default=3.7)
D: dh_python3 debhelper:153: source=python-sqt, binary packages=['python3-sqt']
D: dh_python3 dh_python3:183: processing package python3-sqt...
D: dh_python3 fs:49: moving files from debian/python3-sqt/usr/lib/python3.7/dist-packages to debian/python3-sqt/usr/lib/python3/dist-packages/
D: dh_python3 fs:246: package python3-sqt details = {'requires.txt': {'debian/python3-sqt/usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.7')}, 'ext_no_version': set()}
D: dh_python3 depends:114: generating dependencies for package python3-sqt
D: dh_python3 pydist:137: trying to find dependency for cutadapt (python=None)
D: dh_python3 pydist:137: trying to find dependency for matplotlib (python=None)
D: dh_python3 pydist:137: trying to find dependency for pysam!=0.9.0 (python=None)
D: dh_python3 pydist:137: trying to find dependency for seaborn (python=None)
D: dh_python3 pydist:137: trying to find dependency for xopen (python=None)
D: dh_python3 depends:272: D={'python3:any', 'python3-pysam', 'python3-seaborn', 'python3-xopen', 'python3-cutadapt', 'python3 (>= 3.7~)', 'python3-matplotlib', 'python3 (<< 3.8)'}; R=[]; S=[]; E=[], B=[]; RT=[]
   dh_installinit -a -O--buildsystem=pybuild
   dh_installsystemduser -a -O--buildsystem=pybuild
   dh_perl -a -O--buildsystem=pybuild
   dh_link -a -O--buildsystem=pybuild
   dh_strip_nondeterminism -a -O--buildsystem=pybuild
   dh_compress -a -O--buildsystem=pybuild
	cd debian/python3-sqt
	chmod a-x usr/share/doc/python3-sqt/changelog.Debian usr/share/man/man1/sqt.1
	gzip -9nf usr/share/doc/python3-sqt/changelog.Debian usr/share/man/man1/sqt.1
	cd '/<<PKGBUILDDIR>>'
   dh_fixperms -a -O--buildsystem=pybuild
	find debian/python3-sqt -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
	find debian/python3-sqt ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/python3-sqt/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-sqt/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/python3-sqt/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/python3-sqt/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/python3-sqt -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/python3-sqt/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
	find debian/python3-sqt/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
   dh_missing -a -O--buildsystem=pybuild
   dh_dwz -a -O--buildsystem=pybuild
	dwz -q -- debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so
   dh_strip -a -O--buildsystem=pybuild
	install -d debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/88
	objcopy --only-keep-debug --compress-debug-sections debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/88/3611c8482d9395373998093d4decb9273bb5e6.debug
	chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/88/3611c8482d9395373998093d4decb9273bb5e6.debug
	chown 0:0 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/88/3611c8482d9395373998093d4decb9273bb5e6.debug
	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so
	objcopy --add-gnu-debuglink debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/88/3611c8482d9395373998093d4decb9273bb5e6.debug debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so
	install -d debian/.debhelper/python3-sqt/dbgsym-root/usr/share/doc
	ln -s python3-sqt debian/.debhelper/python3-sqt/dbgsym-root/usr/share/doc/python3-sqt-dbgsym
   dh_makeshlibs -a -O--buildsystem=pybuild
	rm -f debian/python3-sqt/DEBIAN/shlibs
   dh_shlibdeps -a -O--buildsystem=pybuild
	install -d debian/python3-sqt/DEBIAN
	dpkg-shlibdeps -Tdebian/python3-sqt.substvars debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so
   dh_installdeb -a -O--buildsystem=pybuild
	printf '#!/bin/sh\nset -e\n' > debian/python3-sqt/DEBIAN/postinst
	cat debian/python3-sqt.postinst.debhelper >> debian/python3-sqt/DEBIAN/postinst
	chmod 0755 -- debian/python3-sqt/DEBIAN/postinst
	chown 0:0 -- debian/python3-sqt/DEBIAN/postinst
	printf '#!/bin/sh\nset -e\n' > debian/python3-sqt/DEBIAN/prerm
	cat debian/python3-sqt.prerm.debhelper >> debian/python3-sqt/DEBIAN/prerm
	chmod 0755 -- debian/python3-sqt/DEBIAN/prerm
	chown 0:0 -- debian/python3-sqt/DEBIAN/prerm
   dh_gencontrol -a -O--buildsystem=pybuild
	echo misc:Depends= >> debian/python3-sqt.substvars
	echo misc:Pre-Depends= >> debian/python3-sqt.substvars
	install -d debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN
	dpkg-gencontrol -ppython3-sqt -ldebian/changelog -Tdebian/python3-sqt.substvars -Pdebian/.debhelper/python3-sqt/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=python3-sqt-dbgsym "-DDepends=python3-sqt (= \${binary:Version})" "-DDescription=debug symbols for python3-sqt" -DBuild-Ids=883611c8482d9395373998093d4decb9273bb5e6 -DSection=debug -UMulti-Arch -UReplaces -UBreaks
dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Versions} unused, but is defined
	chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/control
	chown 0:0 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/control
	dpkg-gencontrol -ppython3-sqt -ldebian/changelog -Tdebian/python3-sqt.substvars -Pdebian/python3-sqt -UMulti-Arch
dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Versions} unused, but is defined
	chmod 0644 -- debian/python3-sqt/DEBIAN/control
	chown 0:0 -- debian/python3-sqt/DEBIAN/control
   dh_md5sums -a -O--buildsystem=pybuild
	cd debian/python3-sqt >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/python3-sqt/DEBIAN/md5sums
	chown 0:0 -- debian/python3-sqt/DEBIAN/md5sums
	cd debian/.debhelper/python3-sqt/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/md5sums
	chown 0:0 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/md5sums
   dh_builddeb -a -O--buildsystem=pybuild
	dpkg-deb --build debian/python3-sqt ..
	dpkg-deb --build debian/.debhelper/python3-sqt/dbgsym-root ..
dpkg-deb: building package 'python3-sqt-dbgsym' in '../python3-sqt-dbgsym_0.8.0-3_armhf.deb'.
dpkg-deb: building package 'python3-sqt' in '../python3-sqt_0.8.0-3_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../python-sqt_0.8.0-3_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-source: info: using options from python-sqt-0.8.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-02-10T13:46:30Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


python-sqt_0.8.0-3_armhf.changes:
---------------------------------

Format: 1.8
Date: Mon, 04 Feb 2019 09:14:28 +0100
Source: python-sqt
Binary: python3-sqt
Architecture: armhf
Version: 0.8.0-3
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 python3-sqt - SeQuencing Tools for biological DNA/RNA high-throughput data
Closes: 921316
Changes:
 python-sqt (0.8.0-3) unstable; urgency=medium
 .
   * Team upload.
   * Rebuild
     Closes: #921316
Checksums-Sha1:
 3b205f196e9e140f2ba12029152b59886681b081 7282 python-sqt_0.8.0-3_armhf.buildinfo
 ce7015432d62296147f492c63dbbed94a022cd6d 263668 python3-sqt-dbgsym_0.8.0-3_armhf.deb
 be862af172eeb19cf8c1225da03476491fcf6f26 113908 python3-sqt_0.8.0-3_armhf.deb
Checksums-Sha256:
 b933caeee4e0d8f4e9813ca8f6936aa9909ca04f300a8c7a9e338c7b72a68338 7282 python-sqt_0.8.0-3_armhf.buildinfo
 52902811cb68a4788568b4a1b9854553c2a177a90efa9bea35d6cc17aa3cc3d3 263668 python3-sqt-dbgsym_0.8.0-3_armhf.deb
 14acda8b75a5da901f6b01b1ebe25c7a3372e12af2504c3511d63d14838f62d3 113908 python3-sqt_0.8.0-3_armhf.deb
Files:
 120f9a3afee8e753696d48309605e630 7282 science optional python-sqt_0.8.0-3_armhf.buildinfo
 344f4cd0555263a41a741c518ffe49e8 263668 debug optional python3-sqt-dbgsym_0.8.0-3_armhf.deb
 153ea0f77d7436190afc3d14f52bbd3c 113908 python optional python3-sqt_0.8.0-3_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


python3-sqt-dbgsym_0.8.0-3_armhf.deb
------------------------------------

 new Debian package, version 2.0.
 size 263668 bytes: control archive=540 bytes.
     385 bytes,    12 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: python3-sqt-dbgsym
 Source: python-sqt
 Version: 0.8.0-3
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 295
 Depends: python3-sqt (= 0.8.0-3)
 Section: debug
 Priority: optional
 Description: debug symbols for python3-sqt
 Build-Ids: 883611c8482d9395373998093d4decb9273bb5e6

drwxr-xr-x root/root         0 2019-02-04 08:14 ./
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/lib/
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/lib/debug/
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/lib/debug/.build-id/88/
-rw-r--r-- root/root    291832 2019-02-04 08:14 ./usr/lib/debug/.build-id/88/3611c8482d9395373998093d4decb9273bb5e6.debug
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/share/
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/share/doc/
lrwxrwxrwx root/root         0 2019-02-04 08:14 ./usr/share/doc/python3-sqt-dbgsym -> python3-sqt


python3-sqt_0.8.0-3_armhf.deb
-----------------------------

 new Debian package, version 2.0.
 size 113908 bytes: control archive=3348 bytes.
    2222 bytes,    46 lines      control              
    5182 bytes,    61 lines      md5sums              
     248 bytes,    12 lines   *  postinst             #!/bin/sh
     397 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: python3-sqt
 Source: python-sqt
 Version: 0.8.0-3
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 389
 Depends: libc6 (>= 2.4), python3 (<< 3.8), python3 (>= 3.7~), python3-cutadapt, python3-matplotlib, python3-pysam (>= 0.10), python3-seaborn, python3-xopen, python3:any
 Recommends: fonts-noto-color-emoji
 Section: python
 Priority: optional
 Homepage: https://bitbucket.org/marcelm/sqt
 Description: SeQuencing Tools for biological DNA/RNA high-throughput data
  sqt is a collection of command-line tools for working with
  high-throughput sequencing data.  Conceptionally not fixed to use any
  particular language, many sqt subcommands are currently implemented
  in Python. For them, a Python package is available with functions for
  reading and writing FASTA/FASTQ files, computing alignments, quality
  trimming, etc.
  .
  The following tools are offered:
   * sqt-coverage -- Compute per-reference statistics such as coverage
     and GC content
   * sqt-fastqmod -- FASTQ modifications: shorten, subset, reverse
     complement, quality trimming.
   * sqt-fastastats -- Compute N50, min/max length, GC content etc. of
     a FASTA file
   * sqt-qualityguess -- Guess quality encoding of one or more FASTA files.
   * sqt-globalalign -- Compute a global or semiglobal alignment of two strings.
   * sqt-chars -- Count length of the first word given on the command line.
   * sqt-sam-cscq -- Add the CS and CQ tags to a SAM file with colorspace reads.
   * sqt-fastamutate -- Add substitutions and indels to sequences in a
     FASTA file.
   * sqt-fastaextract -- Efficiently extract one or more regions from an
     indexed FASTA file.
   * sqt-translate -- Replace characters in FASTA files (like the 'tr'
     command).
   * sqt-sam-fixn -- Replace all non-ACGT characters within reads in a
     SAM file.
   * sqt-sam-insertsize -- Mean and standard deviation of paired-end
     insert sizes.
   * sqt-sam-set-op -- Set operations (union, intersection, ...) on
     SAM/BAM files.
   * sqt-bam-eof -- Check for the End-Of-File marker in compressed
     BAM files.
   * sqt-checkfastqpe -- Check whether two FASTQ files contain correctly
     paired paired-end data.

drwxr-xr-x root/root         0 2019-02-04 08:14 ./
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/bin/
-rwxr-xr-x root/root       362 2019-02-04 08:14 ./usr/bin/sqt
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/lib/
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/lib/python3/
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/
-rw-r--r-- root/root       618 2019-02-04 08:14 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2019-02-04 08:14 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/dependency_links.txt
-rw-r--r-- root/root        43 2019-02-04 08:14 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/entry_points.txt
-rw-r--r-- root/root         0 2019-02-04 08:14 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/requires.txt
-rw-r--r-- root/root         4 2019-02-04 08:14 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/top_level.txt
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/lib/python3/dist-packages/sqt/
-rw-r--r-- root/root       360 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/__init__.py
-rw-r--r-- root/root      1401 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/__main__.py
-rw-r--r-- root/root       855 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/_codons.py
-rw-r--r-- root/root    182144 2019-02-04 08:14 ./usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so
-rw-r--r-- root/root       471 2019-02-04 08:14 ./usr/lib/python3/dist-packages/sqt/_version.py
-rw-r--r-- root/root      6070 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/align.py
-rw-r--r-- root/root      1980 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/ansicolor.py
-rw-r--r-- root/root       516 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/args.py
-rw-r--r-- root/root     11249 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/cigar.py
-rw-r--r-- root/root      1812 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/colorspace.py
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/lib/python3/dist-packages/sqt/commands/
-rw-r--r-- root/root         0 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/__init__.py
-rw-r--r-- root/root      2423 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/addadapt.py
-rw-r--r-- root/root      3535 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/align.py
-rw-r--r-- root/root      4560 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/bam2fastq.py
-rw-r--r-- root/root      1389 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/bameof.py
-rw-r--r-- root/root      7998 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/bamstats.py
-rw-r--r-- root/root       444 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/chars.py
-rw-r--r-- root/root      2183 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/checkfastqpe.py
-rw-r--r-- root/root      1261 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/checkvcfref.py
-rw-r--r-- root/root      4808 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/compare_sequences.py
-rw-r--r-- root/root      3411 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/coverage.py
-rw-r--r-- root/root      4408 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/cutvect.py
-rw-r--r-- root/root      3170 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/fastaextract.py
-rw-r--r-- root/root      2277 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/fastagrep.py
-rw-r--r-- root/root      6023 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/fastastats.py
-rw-r--r-- root/root      9378 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/fastxmod.py
-rw-r--r-- root/root       871 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/fixbam64.py
-rw-r--r-- root/root      1399 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/histogram.py
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drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/share/
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/share/doc/python3-sqt/
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drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/share/man/
drwxr-xr-x root/root         0 2019-02-04 08:14 ./usr/share/man/man1/
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| Post Build                                                                   |
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| Cleanup                                                                      |
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

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| Summary                                                                      |
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Build Architecture: armhf
Build-Space: 5728
Build-Time: 77
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 379
Job: python-sqt_0.8.0-3
Machine Architecture: armhf
Package: python-sqt
Package-Time: 473
Source-Version: 0.8.0-3
Space: 5728
Status: successful
Version: 0.8.0-3
--------------------------------------------------------------------------------
Finished at 2019-02-10T13:46:30Z
Build needed 00:07:53, 5728k disk space
Raspbian Package Auto-Building

Build log for python-sqt (0.8.0-3) on armhf
