python-pyspoa →
0.0.8-3 →
armhf → 2022-10-02 21:56:42
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| python-pyspoa 0.0.8-3 (armhf) Sun, 02 Oct 2022 21:49:47 +0000 |
+==============================================================================+
Package: python-pyspoa
Version: 0.0.8-3
Source Version: 0.0.8-3
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-9311d27d-59e4-4970-818c-260aea798f02' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.3 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.2 MB]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'python-pyspoa' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/python-pyspoa.git
Please use:
git clone https://salsa.debian.org/med-team/python-pyspoa.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 10.6 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main python-pyspoa 0.0.8-3 (dsc) [2149 B]
Get:2 http://172.17.4.1/private bookworm-staging/main python-pyspoa 0.0.8-3 (tar) [5061 B]
Get:3 http://172.17.4.1/private bookworm-staging/main python-pyspoa 0.0.8-3 (diff) [3356 B]
Fetched 10.6 kB in 0s (293 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/python-pyspoa-lW7GaL/python-pyspoa-0.0.8' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/python-pyspoa-lW7GaL' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-wHyP3K/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-wHyP3K/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-wHyP3K/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-wHyP3K/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-wHyP3K/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-wHyP3K/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-wHyP3K/apt_archive ./ Sources [349 B]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 5 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-wHyP3K/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
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Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-setuptools, libspoa-dev, python3-pybind11
Filtered Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-setuptools, libspoa-dev, python3-pybind11
dpkg-deb: building package 'sbuild-build-depends-python-pyspoa-dummy' in '/<<BUILDDIR>>/resolver-wHyP3K/apt_archive/sbuild-build-depends-python-pyspoa-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-python-pyspoa-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-wHyP3K/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-wHyP3K/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-wHyP3K/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-wHyP3K/apt_archive ./ Sources [528 B]
Get:5 copy:/<<BUILDDIR>>/resolver-wHyP3K/apt_archive ./ Packages [612 B]
Fetched 2473 B in 1s (3615 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install python-pyspoa build dependencies (apt-based resolver)
-------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libcereal-dev
libdebhelper-perl libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libicu71 libjs-jquery libjs-sphinxdoc
libjs-underscore libmagic-mgc libmagic1 libmpdec3 libpipeline1
libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.10
libpython3.10-dev libpython3.10-minimal libpython3.10-stdlib libspoa-dev
libspoa7.0.0 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db
media-types po-debconf pybind11-dev python3 python3-all python3-all-dev
python3-dev python3-distutils python3-lib2to3 python3-minimal
python3-pkg-resources python3-pybind11 python3-setuptools python3.10
python3.10-dev python3.10-minimal rapidjson-dev zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make flit python3-build
python3-tomli python3-installer gettext-doc libasprintf-dev libgettextpo-dev
groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less
www-browser libmail-box-perl pybind11-doc python3-doc python3-tk
python3-venv python-setuptools-doc python3.10-venv python3.10-doc
binfmt-support rapidjson-doc
Recommended packages:
curl | wget | lynx libarchive-cpio-perl javascript-common libltdl-dev
libmail-sendmail-perl libeigen3-dev python3-numpy
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libcereal-dev
libdebhelper-perl libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libicu71 libjs-jquery libjs-sphinxdoc
libjs-underscore libmagic-mgc libmagic1 libmpdec3 libpipeline1
libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.10
libpython3.10-dev libpython3.10-minimal libpython3.10-stdlib libspoa-dev
libspoa7.0.0 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db
media-types po-debconf pybind11-dev python3 python3-all python3-all-dev
python3-dev python3-distutils python3-lib2to3 python3-minimal
python3-pkg-resources python3-pybind11 python3-setuptools python3.10
python3.10-dev python3.10-minimal rapidjson-dev
sbuild-build-depends-python-pyspoa-dummy zlib1g-dev
0 upgraded, 64 newly installed, 0 to remove and 5 not upgraded.
Need to get 30.5 MB of archives.
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Get:1 copy:/<<BUILDDIR>>/resolver-wHyP3K/apt_archive ./ sbuild-build-depends-python-pyspoa-dummy 0.invalid.0 [900 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-minimal armhf 3.10.7-1 [813 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.4.9-1 [83.3 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf python3.10-minimal armhf 3.10.7-1 [1518 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf python3-minimal armhf 3.10.6-1 [38.7 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf media-types all 8.0.0 [33.4 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-stdlib armhf 3.10.7-1 [1598 kB]
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Get:10 http://172.17.4.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.10.6-1 [21.7 kB]
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Get:12 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
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Get:15 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.6-3 [34.3 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.10.2-3 [1364 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-4 [295 kB]
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Get:19 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-4 [65.8 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-9 [171 kB]
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Get:22 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
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Get:31 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB]
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Get:34 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.14-1 [83.0 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf libicu71 armhf 71.1-3 [8855 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1 [591 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-9 [1220 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
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Get:41 http://172.17.4.1/private bookworm-staging/main armhf python3-lib2to3 all 3.10.7-1 [79.9 kB]
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Get:44 http://172.17.4.1/private bookworm-staging/main armhf rapidjson-dev all 1.1.0+dfsg2-7 [98.9 kB]
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Get:47 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
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Get:49 http://172.17.4.1/private bookworm-staging/main armhf libjs-sphinxdoc all 4.5.0-4 [142 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10 armhf 3.10.7-1 [1457 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-4.1 [183 kB]
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Get:57 http://172.17.4.1/private bookworm-staging/main armhf pybind11-dev all 2.10.0-2 [180 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf python3-all armhf 3.10.6-1 [1060 B]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf python3.10-dev armhf 3.10.7-1 [515 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf python3-dev armhf 3.10.6-1 [25.4 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf python3-all-dev armhf 3.10.6-1 [1068 B]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf python3-pkg-resources all 59.6.0-1.2 [196 kB]
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Get:64 http://172.17.4.1/private bookworm-staging/main armhf python3-setuptools all 59.6.0-1.2 [401 kB]
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Setting up media-types (8.0.0) ...
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Setting up libicu71:armhf (71.1-3) ...
Setting up bsdextrautils (2.38.1-1) ...
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Setting up libarchive-zip-perl (1.68-1) ...
Setting up libdebhelper-perl (13.9.1) ...
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Setting up libspoa7.0.0:armhf (4.0.7+ds-3) ...
Setting up autopoint (0.21-9) ...
Setting up autoconf (2.71-2) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-4.1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libmpdec3:armhf (2.5.1-2+rpi1) ...
Setting up libsub-override-perl (0.09-3) ...
Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Setting up libelf1:armhf (0.187-2+rpi2) ...
Setting up libxml2:armhf (2.9.14+dfsg-1) ...
Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.0-1) ...
Setting up gettext (0.21-9) ...
Setting up libtool (2.4.7-4) ...
Setting up libcereal-dev (1.3.2+dfsg-2) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libpython3.10-stdlib:armhf (3.10.7-1) ...
Setting up dh-autoreconf (20) ...
Setting up libjs-sphinxdoc (4.5.0-4) ...
Setting up dh-strip-nondeterminism (1.13.0-1) ...
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Setting up groff-base (1.22.4-8) ...
Setting up libpython3-stdlib:armhf (3.10.6-1) ...
Setting up libpython3.10:armhf (3.10.7-1) ...
Setting up python3.10 (3.10.7-1) ...
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Setting up po-debconf (1.0.21+nmu1) ...
Setting up python3 (3.10.6-1) ...
Setting up man-db (2.10.2-3) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libpython3.10-dev:armhf (3.10.7-1) ...
Setting up python3.10-dev (3.10.7-1) ...
Setting up python3-lib2to3 (3.10.7-1) ...
Setting up python3-pybind11 (2.10.0-2) ...
Setting up python3-pkg-resources (59.6.0-1.2) ...
Setting up python3-distutils (3.10.7-1) ...
Setting up dh-python (5.20220819+rpi1) ...
Setting up libpython3-dev:armhf (3.10.6-1) ...
Setting up python3-setuptools (59.6.0-1.2) ...
Setting up python3-all (3.10.6-1) ...
Setting up debhelper (13.9.1) ...
Setting up libpython3-all-dev:armhf (3.10.6-1) ...
Setting up python3-dev (3.10.6-1) ...
Setting up python3-all-dev (3.10.6-1) ...
Setting up sbuild-build-depends-python-pyspoa-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.35-1+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-187-generic armhf (armv8l)
Toolchain package versions: binutils_2.39-3+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-3+rpi1 gcc-12_12.2.0-3+rpi1 libc6-dev_2.35-1+rpi1 libstdc++-12-dev_12.2.0-3+rpi1 libstdc++6_12.2.0-3+rpi1 linux-libc-dev_5.19.6-1+rpi1
Package versions: adduser_3.129 apt_2.5.2 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-9 autotools-dev_20220109.1 base-files_12.2+rpi1 base-passwd_3.6.1 bash_5.2~rc2-2 binutils_2.39-3+rpi1 binutils-arm-linux-gnueabihf_2.39-3+rpi1 binutils-common_2.39-3+rpi1 bsdextrautils_2.38.1-1 bsdutils_1:2.38.1-1 build-essential_12.9 bzip2_1.0.8-5+b2 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-3+rpi1 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.79 debhelper_13.9.1 debianutils_5.7-0.3 dh-autoreconf_20 dh-python_5.20220819+rpi1 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.8-1 dirmngr_2.2.39-1 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.14-1 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 file_1:5.41-4 findutils_4.9.0-3 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-3+rpi1 gcc_4:12.2.0-1+rpi1 gcc-12_12.2.0-3+rpi1 gcc-12-base_12.2.0-3+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-9 gettext-base_0.21-9 gnupg_2.2.39-1 gnupg-l10n_2.2.39-1 gnupg-utils_2.2.39-1 gpg_2.2.39-1 gpg-agent_2.2.39-1 gpg-wks-client_2.2.39-1 gpg-wks-server_2.2.39-1 gpgconf_2.2.39-1 gpgsm_2.2.39-1 gpgv_2.2.39-1 grep_3.7-1 groff-base_1.22.4-8 gzip_1.12-1 hostname_3.23 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20211215-1 krb5-locales_1.20-1 libacl1_2.3.1-1 libapt-pkg6.0_2.5.2 libarchive-zip-perl_1.68-1 libasan8_12.2.0-3+rpi1 libassuan0_2.5.5-4 libatomic1_12.2.0-3+rpi1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1 libbinutils_2.39-3+rpi1 libblkid1_2.38.1-1 libbz2-1.0_1.0.8-5+b2 libc-bin_2.35-1+rpi1 libc-dev-bin_2.35-1+rpi1 libc6_2.35-1+rpi1 libc6-dev_2.35-1+rpi1 libcap-ng0_0.8.3-1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_12.2.0-3+rpi1 libcereal-dev_1.3.2+dfsg-2 libcom-err2_1.46.6~rc1-1 libcrypt-dev_1:4.4.28-2 libcrypt1_1:4.4.28-2 libctf-nobfd0_2.39-3+rpi1 libctf0_2.39-3+rpi1 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.264 libdebhelper-perl_13.9.1 libdpkg-perl_1.21.9+rpi1 libelf1_0.187-2+rpi2 libexpat1_2.4.9-1 libexpat1-dev_2.4.9-1 libext2fs2_1.46.6~rc1-1 libfakeroot_1.29-1 libffi8_3.4.2-4 libfile-stripnondeterminism-perl_1.13.0-1 libgcc-12-dev_12.2.0-3+rpi1 libgcc-s1_12.2.0-3+rpi1 libgcrypt20_1.10.1-2+b2 libgdbm-compat4_1.23-2 libgdbm6_1.23-2 libgmp10_2:6.2.1+dfsg1-1 libgnutls30_3.7.7-2 libgomp1_12.2.0-3+rpi1 libgpg-error0_1.45-2 libgssapi-krb5-2_1.20-1 libhogweed6_3.8.1-2 libicu71_71.1-3 libidn2-0_2.3.3-1 libisl23_0.25-1 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-sphinxdoc_4.5.0-4 libjs-underscore_1.13.4~dfsg+~1.11.4-1 libk5crypto3_1.20-1 libkeyutils1_1.6.3-1 libkrb5-3_1.20-1 libkrb5support0_1.20-1 libksba8_1.6.0-3 libldap-2.5-0_2.5.13+dfsg-1 liblz4-1_1.9.4-1+rpi1 liblzma5_5.2.5-2.1 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmount1_2.38.1-1 libmpc3_1.2.1-2 libmpdec3_2.5.1-2+rpi1 libmpfr6_4.1.0-3 libncursesw6_6.3+20220423-2 libnettle8_3.8.1-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.1-1 libpam-cap_1:2.44-1 libpam-modules_1.5.2-2 libpam-modules-bin_1.5.2-2 libpam-runtime_1.5.2-2 libpam0g_1.5.2-2 libpcre2-8-0_10.40-1+b2 libpcre3_2:8.39-14 libperl5.34_5.34.0-5 libpipeline1_1.5.6-3 libpython3-all-dev_3.10.6-1 libpython3-dev_3.10.6-1 libpython3-stdlib_3.10.6-1 libpython3.10_3.10.7-1 libpython3.10-dev_3.10.7-1 libpython3.10-minimal_3.10.7-1 libpython3.10-stdlib_3.10.7-1 libreadline8_8.2~rc2-2 libsasl2-2_2.1.28+dfsg-8 libsasl2-modules-db_2.1.28+dfsg-8 libseccomp2_2.5.4-1+rpi1 libselinux1_3.4-1 libsemanage-common_3.4-1 libsemanage2_3.4-1 libsepol1_3.1-1 libsepol2_3.4-2 libsmartcols1_2.38.1-1 libspoa-dev_4.0.7+ds-3 libspoa7.0.0_4.0.7+ds-3 libsqlite3-0_3.39.3-1 libss2_1.46.6~rc1-1 libssl1.1_1.1.1o-1 libssl3_3.0.5-2 libstdc++-12-dev_12.2.0-3+rpi1 libstdc++6_12.2.0-3+rpi1 libsub-override-perl_0.09-3 libsystemd0_251.4-3+rpi1 libtasn1-6_4.19.0-2 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-4 libubsan1_12.2.0-3+rpi1 libuchardet0_0.0.7-1 libudev1_251.4-3+rpi1 libunistring2_1.0-1 libuuid1_2.38.1-1 libxml2_2.9.14+dfsg-1 libxxhash0_0.8.1-1 libzstd1_1.5.2+dfsg-1 linux-libc-dev_5.19.6-1+rpi1 login_1:4.11.1+dfsg1-2 logsave_1.46.6~rc1-1 lsb-base_11.4+rpi1 m4_1.4.19-1 make_4.3-4.1 man-db_2.10.2-3 mawk_1.3.4.20200120-3.1 media-types_8.0.0 mount_2.38.1-1 nano_6.4-1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 netbase_6.3 passwd_1:4.11.1+dfsg1-2 patch_2.7.6-7 perl_5.34.0-5 perl-base_5.34.0-5 perl-modules-5.34_5.34.0-5 pinentry-curses_1.2.0-2 po-debconf_1.0.21+nmu1 pybind11-dev_2.10.0-2 python3_3.10.6-1 python3-all_3.10.6-1 python3-all-dev_3.10.6-1 python3-dev_3.10.6-1 python3-distutils_3.10.7-1 python3-lib2to3_3.10.7-1 python3-minimal_3.10.6-1 python3-pkg-resources_59.6.0-1.2 python3-pybind11_2.10.0-2 python3-setuptools_59.6.0-1.2 python3.10_3.10.7-1 python3.10-dev_3.10.7-1 python3.10-minimal_3.10.7-1 rapidjson-dev_1.1.0+dfsg2-7 raspbian-archive-keyring_20120528.2 readline-common_8.2~rc2-2 rpcsvc-proto_1.4.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-pyspoa-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.30 sysvinit-utils_3.05-6 tar_1.34+dfsg-1 tzdata_2022d-1 util-linux_2.38.1-1 util-linux-extra_2.38.1-1 xz-utils_5.2.5-2.1 zlib1g_1:1.2.11.dfsg-4.1 zlib1g-dev_1:1.2.11.dfsg-4.1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.wQIL58Zc/trustedkeys.kbx': General error
gpgv: Signature made Thu Sep 29 17:24:02 2022 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./python-pyspoa_0.0.8-3.dsc
dpkg-source: info: extracting python-pyspoa in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking python-pyspoa_0.0.8.orig.tar.gz
dpkg-source: info: unpacking python-pyspoa_0.0.8-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying adjust-spoa-lib.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-9311d27d-59e4-4970-818c-260aea798f02
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package python-pyspoa
dpkg-buildpackage: info: source version 0.0.8-3
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --with python3 --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:240: python3.10 setup.py clean
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.10' does not exist -- can't clean it
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:240: python3.10 setup.py config
running config
dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:240: /usr/bin/python3 setup.py build
running build
running build_ext
creating tmp
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c /tmp/tmp2zo2yhew.cpp -o tmp/tmp2zo2yhew.o -std=c++14
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c /tmp/tmpm7xxtxuc.cpp -o tmp/tmpm7xxtxuc.o -fvisibility=hidden
building 'spoa' extension
creating build
creating build/temp.linux-armhf-3.10
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/include/spoa -Isrc/vendor/cereal/include -I/usr/lib/python3/dist-packages/pybind11/include -I/usr/lib/python3/dist-packages/pybind11/include -I/usr/include/python3.10 -c pyspoa.cpp -o build/temp.linux-armhf-3.10/pyspoa.o -DVERSION_INFO="0.0.8" -std=c++14 -fvisibility=hidden
arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.10/pyspoa.o /usr/lib/arm-linux-gnueabihf/libspoa.so -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/spoa.cpython-310-arm-linux-gnueabihf.so
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_test -- --system=custom --test-args="PYTHONPATH={build_dir} {interpreter} tests/test_pyspoa.py"
I: pybuild base:240: PYTHONPATH=/<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build python3.10 tests/test_pyspoa.py
..
----------------------------------------------------------------------
Ran 2 tests in 0.001s
OK
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
dh_auto_install --destdir=debian/python3-pyspoa/ -a -O--buildsystem=pybuild
I: pybuild base:240: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-pyspoa
running install
/usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
warnings.warn(
make[1]: Entering directory '/<<PKGBUILDDIR>>/src/build'
make[1]: *** No targets specified and no makefile found. Stop.
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src/build'
running build
running build_ext
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c /tmp/tmphbkmyefb.cpp -o tmp/tmphbkmyefb.o -std=c++14
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c /tmp/tmpyl136w7w.cpp -o tmp/tmpyl136w7w.o -fvisibility=hidden
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-pyspoa/usr
creating /<<PKGBUILDDIR>>/debian/python3-pyspoa/usr/lib
creating /<<PKGBUILDDIR>>/debian/python3-pyspoa/usr/lib/python3.10
creating /<<PKGBUILDDIR>>/debian/python3-pyspoa/usr/lib/python3.10/dist-packages
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/spoa.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-pyspoa/usr/lib/python3.10/dist-packages
running install_egg_info
running egg_info
creating pyspoa.egg-info
writing pyspoa.egg-info/PKG-INFO
writing dependency_links to pyspoa.egg-info/dependency_links.txt
writing requirements to pyspoa.egg-info/requires.txt
writing top-level names to pyspoa.egg-info/top_level.txt
writing manifest file 'pyspoa.egg-info/SOURCES.txt'
reading manifest file 'pyspoa.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching '*' under directory 'src/'
adding license file 'LICENSE'
writing manifest file 'pyspoa.egg-info/SOURCES.txt'
Copying pyspoa.egg-info to /<<PKGBUILDDIR>>/debian/python3-pyspoa/usr/lib/python3.10/dist-packages/pyspoa-0.0.8.egg-info
Skipping SOURCES.txt
running install_scripts
dh_installdocs -a -O--buildsystem=pybuild
dh_installchangelogs -a -O--buildsystem=pybuild
dh_python3 -a -O--buildsystem=pybuild
dh_installsystemduser -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
dh_fixperms -a -O--buildsystem=pybuild
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'python3-pyspoa' in '../python3-pyspoa_0.0.8-3_armhf.deb'.
dpkg-deb: building package 'python3-pyspoa-dbgsym' in '../python3-pyspoa-dbgsym_0.0.8-3_armhf.deb'.
dpkg-genbuildinfo --build=any -O../python-pyspoa_0.0.8-3_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> -O../python-pyspoa_0.0.8-3_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2022-10-02T21:56:38Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
python-pyspoa_0.0.8-3_armhf.changes:
------------------------------------
Format: 1.8
Date: Thu, 29 Sep 2022 19:22:16 +0200
Source: python-pyspoa
Binary: python3-pyspoa python3-pyspoa-dbgsym
Architecture: armhf
Version: 0.0.8-3
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
python3-pyspoa - Python bindings to spoa
Changes:
python-pyspoa (0.0.8-3) unstable; urgency=medium
.
* Team upload.
* Fix watch file
* Standards-Version: 4.6.1 (routine-update)
* Remove trailing whitespace in debian/copyright (routine-update)
Checksums-Sha1:
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bc4a07a879ee3d9d7937d5ecdb149ef6aae39b7b 798436 python3-pyspoa-dbgsym_0.0.8-3_armhf.deb
518187e96868adccf4949f0c534913086eda239a 43528 python3-pyspoa_0.0.8-3_armhf.deb
Checksums-Sha256:
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0af7ebc9b74404216e6594d7c016525711f82051b618040df33c9165191d57f5 43528 python3-pyspoa_0.0.8-3_armhf.deb
Files:
c403b04784043310b6682afc7c7ba620 6138 python optional python-pyspoa_0.0.8-3_armhf.buildinfo
016dd7a5a438ea2b39a658b89fd7110c 798436 debug optional python3-pyspoa-dbgsym_0.0.8-3_armhf.deb
784a72e7208961b756eea7debec5d39a 43528 python optional python3-pyspoa_0.0.8-3_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
python3-pyspoa-dbgsym_0.0.8-3_armhf.deb
---------------------------------------
new Debian package, version 2.0.
size 798436 bytes: control archive=544 bytes.
397 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: python3-pyspoa-dbgsym
Source: python-pyspoa
Version: 0.0.8-3
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 819
Depends: python3-pyspoa (= 0.0.8-3)
Section: debug
Priority: optional
Description: debug symbols for python3-pyspoa
Build-Ids: ef6ce6fcda5d5b11e77ac0dcaaf28d859341da9d
drwxr-xr-x root/root 0 2022-09-29 17:22 ./
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/lib/
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/lib/debug/
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/lib/debug/.build-id/ef/
-rw-r--r-- root/root 827796 2022-09-29 17:22 ./usr/lib/debug/.build-id/ef/6ce6fcda5d5b11e77ac0dcaaf28d859341da9d.debug
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/share/
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/share/doc/
lrwxrwxrwx root/root 0 2022-09-29 17:22 ./usr/share/doc/python3-pyspoa-dbgsym -> python3-pyspoa
python3-pyspoa_0.0.8-3_armhf.deb
--------------------------------
new Debian package, version 2.0.
size 43528 bytes: control archive=1092 bytes.
882 bytes, 19 lines control
760 bytes, 8 lines md5sums
Package: python3-pyspoa
Source: python-pyspoa
Version: 0.0.8-3
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 149
Depends: python3 (<< 3.11), python3 (>= 3.10~), python3-pybind11, libc6 (>= 2.32), libgcc-s1 (>= 3.5), libspoa7.0.0 (>= 4.0.7+ds), libstdc++6 (>= 11)
Section: python
Priority: optional
Homepage: https://github.com/nanoporetech/pyspoa
Description: Python bindings to spoa
Spoa (SIMD POA) is a c++ implementation of the partial order alignment
(POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which
is used to generate consensus sequences (as described in
10.1093/bioinformatics/btg109). It supports three alignment modes: local
(Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment
(overlap).
.
This package presents Python bindings for the spoa library
drwxr-xr-x root/root 0 2022-09-29 17:22 ./
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/lib/
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/lib/python3/
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/lib/python3/dist-packages/pyspoa-0.0.8.egg-info/
-rw-r--r-- root/root 1982 2022-09-29 17:22 ./usr/lib/python3/dist-packages/pyspoa-0.0.8.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2022-09-29 17:22 ./usr/lib/python3/dist-packages/pyspoa-0.0.8.egg-info/dependency_links.txt
-rw-r--r-- root/root 1 2022-09-29 17:22 ./usr/lib/python3/dist-packages/pyspoa-0.0.8.egg-info/not-zip-safe
-rw-r--r-- root/root 0 2022-09-29 17:22 ./usr/lib/python3/dist-packages/pyspoa-0.0.8.egg-info/requires.txt
-rw-r--r-- root/root 5 2022-09-29 17:22 ./usr/lib/python3/dist-packages/pyspoa-0.0.8.egg-info/top_level.txt
-rw-r--r-- root/root 133572 2022-09-29 17:22 ./usr/lib/python3/dist-packages/spoa.cpython-310-arm-linux-gnueabihf.so
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/share/
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/share/doc/
drwxr-xr-x root/root 0 2022-09-29 17:22 ./usr/share/doc/python3-pyspoa/
-rw-r--r-- root/root 326 2022-09-29 17:22 ./usr/share/doc/python3-pyspoa/changelog.Debian.gz
-rw-r--r-- root/root 1381 2022-09-29 17:22 ./usr/share/doc/python3-pyspoa/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 8364
Build-Time: 68
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 319
Job: python-pyspoa_0.0.8-3
Machine Architecture: armhf
Package: python-pyspoa
Package-Time: 411
Source-Version: 0.0.8-3
Space: 8364
Status: successful
Version: 0.0.8-3
--------------------------------------------------------------------------------
Finished at 2022-10-02T21:56:38Z
Build needed 00:06:51, 8364k disk space