Build log for python-escript (5.5-4) on armhf

python-escript → 5.5-4 → armhf → 2020-03-01 11:36:50

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-02

+==============================================================================+
| python-escript 5.5-4 (armhf)                 Sun, 01 Mar 2020 09:19:00 +0000 |
+==============================================================================+

Package: python-escript
Version: 5.5-4
Source Version: 5.5-4
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-495f63ea-3ac8-41e9-af40-9be3495ea9db' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.6 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.7 MB]
Fetched 24.3 MB in 28s (877 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'python-escript' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org:/science-team/python-escript.git
Please use:
git clone https://salsa.debian.org:/science-team/python-escript.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 24.5 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main python-escript 5.5-4 (dsc) [2765 B]
Get:2 http://172.17.0.1/private bullseye-staging/main python-escript 5.5-4 (tar) [24.5 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main python-escript 5.5-4 (diff) [14.5 kB]
Fetched 24.5 MB in 2s (10.4 MB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/python-escript-rg4IyW/python-escript-5.5' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/python-escript-rg4IyW' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-C1ZYoC/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-C1ZYoC/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive ./ Packages [433 B]
Fetched 2109 B in 1s (2673 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 36 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12256 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 12), dh-sequence-python3, dh-sequence-sphinxdoc, python3-dev, python3-gdal, python3-sympy, python3-matplotlib, python3-numpy, python3-scipy, python3-pyproj, libboost-python-dev, libboost-random-dev, libnetcdf-dev, libnetcdf-cxx-legacy-dev, libnetcdf-c++4-dev, libsilo-dev (>= 4.10.2.real-5), gmsh, mpi-default-dev, scons, zip, python3-sphinx, doxygen, texlive, ghostscript, texlive-latex-extra, texlive-latex-recommended, lsb-release, libopenmpi-dev, openmpi-bin, libjs-mathjax
Filtered Build-Depends: debhelper-compat (= 12), dh-sequence-python3, dh-sequence-sphinxdoc, python3-dev, python3-gdal, python3-sympy, python3-matplotlib, python3-numpy, python3-scipy, python3-pyproj, libboost-python-dev, libboost-random-dev, libnetcdf-dev, libnetcdf-cxx-legacy-dev, libnetcdf-c++4-dev, libsilo-dev (>= 4.10.2.real-5), gmsh, mpi-default-dev, scons, zip, python3-sphinx, doxygen, texlive, ghostscript, texlive-latex-extra, texlive-latex-recommended, lsb-release, libopenmpi-dev, openmpi-bin, libjs-mathjax
dpkg-deb: building package 'sbuild-build-depends-python-escript-dummy' in '/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive/sbuild-build-depends-python-escript-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-python-escript-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive ./ Sources [753 B]
Get:5 copy:/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive ./ Packages [795 B]
Fetched 2881 B in 1s (3613 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install python-escript build dependencies (apt-based resolver)
--------------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev binutils
  binutils-arm-linux-gnueabihf binutils-common bsdmainutils ca-certificates
  cpp-8 debhelper dh-autoreconf dh-python dh-strip-nondeterminism
  distro-info-data docutils-common doxygen dwz file fontconfig-config
  fonts-dejavu-core fonts-lmodern fonts-lyx fonts-mathjax fonts-urw-base35
  gcc-8 gcc-8-base gdal-data gettext gettext-base gfortran-8 ghostscript gmsh
  groff-base hdf5-helpers ibverbs-providers intltool-debian libaec-dev libaec0
  libapache-pom-java libarchive-zip-perl libarmadillo9 libarpack2
  libavahi-client3 libavahi-common-data libavahi-common3 libbinutils libblas3
  libboost-python-dev libboost-python1.67-dev libboost-python1.67.0
  libboost-random-dev libboost-random1.67-dev libboost-random1.67.0
  libboost-system1.67.0 libboost1.67-dev libbrotli1 libbsd0 libcairo2
  libcfitsio8 libcharls2 libclang1-9 libcommons-logging-java
  libcommons-parent-java libcroco3 libctf0 libcups2 libcurl3-gnutls
  libcurl4-gnutls-dev libdap25 libdapclient6v5 libdbus-1-3 libdebhelper-perl
  libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2
  libelf1 libepsilon1 libevent-2.1-7 libevent-core-2.1-7 libevent-dev
  libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7
  libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfltk-gl1.3
  libfltk-images1.3 libfltk1.3 libfontbox-java libfontconfig1 libfreeimage3
  libfreetype6 libfreexl1 libfyba0 libgcc-8-dev libgdal26 libgeos-3.8.0
  libgeos-c1v5 libgeotiff5 libgfortran-8-dev libgfortran5 libgif7 libgl1
  libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libglib2.0-0 libglu1-mesa
  libglvnd0 libglx-mesa0 libglx0 libgmsh4 libgnutls30 libgraphite2-3 libgs9
  libgs9-common libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b libhdf4-0-alt
  libhdf5-103 libhdf5-cpp-103 libhdf5-dev libhdf5-openmpi-103 libhwloc-dev
  libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libice6 libicu63
  libidn11 libijs-0.35 libilmbase24 libjbig0 libjbig2dec0 libjpeg-dev
  libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjs-jquery-ui
  libjs-mathjax libjs-sphinxdoc libjs-underscore libjson-c4 libjxr0
  libk5crypto3 libkeyutils1 libkmlbase1 libkmldom1 libkmlengine1 libkpathsea6
  libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblcms2-2 libllvm9
  libltdl-dev libltdl7 libmagic-mgc libmagic1 libmariadb3 libmetis5
  libminizip1 libmpdec2 libnetcdf-c++4 libnetcdf-c++4-1 libnetcdf-c++4-dev
  libnetcdf-cxx-legacy-dev libnetcdf-dev libnetcdf15 libnghttp2-14 libnl-3-200
  libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnspr4 libnss3
  libocct-data-exchange-7.3 libocct-foundation-7.3
  libocct-modeling-algorithms-7.3 libocct-modeling-data-7.3 libocct-ocaf-7.3
  libocct-visualization-7.3 libodbc1 libogdi4.1 libopenexr24 libopenjp2-7
  libopenmpi-dev libopenmpi3 libpaper-utils libpaper1 libpciaccess0
  libpdfbox-java libpipeline1 libpixman-1-0 libpmix2 libpng16-16 libpoppler82
  libpopt0 libpq5 libproj15 libpsl5 libptexenc1 libpython-dev libpython-stdlib
  libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev
  libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib
  libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib
  libpython3.8-minimal libpython3.8-stdlib libqhull7 libraw19 librtmp1
  libsensors-config libsensors5 libsigsegv2 libsilo-dev libsiloh5-0 libsm6
  libspatialite7 libssh2-1 libssl1.1 libsub-override-perl libsuperlu5
  libsynctex2 libsz2 libtbb2 libteckit0 libtexlua53 libtexluajit2 libtiff5
  libtinfo5 libtool libuchardet0 liburiparser1 libwebp6 libwebpmux3 libx11-6
  libx11-data libx11-xcb1 libxapian30 libxau6 libxaw7 libxcb-dri2-0
  libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shm0
  libxcb-sync1 libxcb1 libxcursor1 libxdamage1 libxdmcp6 libxerces-c3.2
  libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml2 libxmu6 libxnvctrl0
  libxpm4 libxrender1 libxshmfence1 libxt6 libxxf86vm1 libz3-4 libzzip-0-13
  lsb-release m4 man-db mariadb-common mime-support mpi-default-dev
  mysql-common ocl-icd-libopencl1 odbcinst odbcinst1debian2 openmpi-bin
  openmpi-common openssh-client openssl po-debconf poppler-data
  preview-latex-style proj-data python python-babel-localedata python-dev
  python-matplotlib-data python-minimal python2 python2-dev python2-minimal
  python2.7 python2.7-dev python2.7-minimal python3 python3-alabaster
  python3-attr python3-babel python3-certifi python3-chardet python3-cycler
  python3-dateutil python3-decorator python3-dev python3-distutils
  python3-docutils python3-gdal python3-idna python3-imagesize python3-jinja2
  python3-kiwisolver python3-lib2to3 python3-markupsafe python3-matplotlib
  python3-minimal python3-mpmath python3-numpy python3-packaging
  python3-pkg-resources python3-pygments python3-pyparsing python3-pyproj
  python3-requests python3-roman python3-scipy python3-six python3-sphinx
  python3-sympy python3-tz python3-urllib3 python3.7 python3.7-dev
  python3.7-minimal python3.8 python3.8-minimal scons sensible-utils sgml-base
  sphinx-common t1utils tex-common texlive texlive-base texlive-binaries
  texlive-fonts-recommended texlive-latex-base texlive-latex-extra
  texlive-latex-recommended texlive-pictures ttf-bitstream-vera ucf x11-common
  xdg-utils xml-core zip zlib1g zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican
  | wordlist whois vacation gcc-8-locales dh-make doxygen-latex doxygen-doc
  doxygen-gui graphviz fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre
  gcc-8-doc gettext-doc libasprintf-dev libgettextpo-dev gfortran-8-doc
  libcoarrays-dev ghostscript-x groff libboost1.67-doc gccxml
  libboost-atomic1.67-dev libboost-chrono1.67-dev libboost-container1.67-dev
  libboost-context1.67-dev libboost-contract1.67-dev
  libboost-coroutine1.67-dev libboost-date-time1.67-dev
  libboost-exception1.67-dev libboost-fiber1.67-dev
  libboost-filesystem1.67-dev libboost-graph1.67-dev
  libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev
  libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev
  libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev
  libboost-program-options1.67-dev libboost-regex1.67-dev
  libboost-serialization1.67-dev libboost-signals1.67-dev
  libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-test1.67-dev
  libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev
  libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev
  libavalon-framework-java libcommons-logging-java-doc
  libexcalibur-logkit-java liblog4j1.2-java cups-common libcurl4-doc
  libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev librtmp-dev
  libssh2-1-dev pkg-config geotiff-bin gdal-bin libgeotiff-epsg gnutls-bin
  krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev hdf4-tools libhdf5-doc
  libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc
  liblcms2-utils libtool-doc netcdf-bin netcdf-doc libmyodbc odbc-postgresql
  tdsodbc unixodbc-bin ogdi-bin openmpi-doc pciutils proj-bin lm-sensors
  gcj-jdk xapian-tools m4-doc apparmor less www-browser opencl-icd gfortran
  | fortran-compiler keychain libpam-ssh monkeysphere ssh-askpass
  libmail-box-perl poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho
  fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai
  fonts-arphic-uming fonts-nanum python-doc python-tk python2-doc
  python2.7-doc binfmt-support python3-doc python3-tk python3-venv
  python-attr-doc python-cycler-doc docutils-doc fonts-linuxlibertine
  | ttf-linux-libertine texlive-lang-french python-jinja2-doc dvipng ffmpeg
  gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python-matplotlib-doc
  python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-nose
  python3-pyqt5 python3-sip python3-tornado texlive-extra-utils ttf-staypuft
  python3-gmpy2 python-mpmath-doc gfortran python-numpy-doc python3-pytest
  python3-numpy-dbg python3-setuptools python-pygments-doc
  python-pyparsing-doc python3-cryptography python3-openssl python3-socks
  python-scipy-doc imagemagick-6.q16 latexmk python3-sphinx-rtd-theme
  python3-stemmer sphinx-doc texlive-plain-generic texlive-fonts-extra
  python-sympy-doc python3.7-venv python3.7-doc python3.8-venv python3.8-doc
  sgml-base-doc perl-tk xpdf | pdf-viewer xzdec texlive-fonts-recommended-doc
  texlive-latex-base-doc icc-profiles libfile-which-perl
  libspreadsheet-parseexcel-perl texlive-latex-extra-doc
  texlive-latex-recommended-doc texlive-luatex texlive-pstricks dot2tex prerex
  ruby-tcltk | libtcltk-ruby texlive-pictures-doc vprerex
Recommended packages:
  curl | wget | lynx gmsh-doc dbus libarchive-cpio-perl proj-bin
  libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback
  javascript-common krb5-locales pkg-config libcoarrays-openmpi-dev
  publicsuffix xauth libmail-sendmail-perl python3-pil python3-tk ipython3
  lmodern dvisvgm tex-gyre tipa texlive-plain-generic ruby | ruby-interpreter
  tk libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
  x11-xserver-utils unzip
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils ca-certificates cpp-8
  debhelper dh-autoreconf dh-python dh-strip-nondeterminism distro-info-data
  docutils-common doxygen dwz file fontconfig-config fonts-dejavu-core
  fonts-lmodern fonts-lyx fonts-mathjax fonts-urw-base35 gcc-8 gdal-data
  gettext gettext-base gfortran-8 ghostscript gmsh groff-base hdf5-helpers
  ibverbs-providers intltool-debian libaec-dev libaec0 libapache-pom-java
  libarchive-zip-perl libarmadillo9 libarpack2 libavahi-client3
  libavahi-common-data libavahi-common3 libblas3 libboost-python-dev
  libboost-python1.67-dev libboost-python1.67.0 libboost-random-dev
  libboost-random1.67-dev libboost-random1.67.0 libboost-system1.67.0
  libboost1.67-dev libbrotli1 libbsd0 libcairo2 libcfitsio8 libcharls2
  libclang1-9 libcommons-logging-java libcommons-parent-java libcroco3
  libcups2 libcurl3-gnutls libcurl4-gnutls-dev libdap25 libdapclient6v5
  libdbus-1-3 libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm-nouveau2
  libdrm-radeon1 libdrm2 libedit2 libelf1 libepsilon1 libevent-2.1-7
  libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7
  libevent-pthreads-2.1-7 libexpat1 libexpat1-dev
  libfile-stripnondeterminism-perl libfltk-gl1.3 libfltk-images1.3 libfltk1.3
  libfontbox-java libfontconfig1 libfreeimage3 libfreetype6 libfreexl1
  libfyba0 libgcc-8-dev libgdal26 libgeos-3.8.0 libgeos-c1v5 libgeotiff5
  libgfortran-8-dev libgfortran5 libgif7 libgl1 libgl1-mesa-dri libgl2ps1.4
  libglapi-mesa libglib2.0-0 libglu1-mesa libglvnd0 libglx-mesa0 libglx0
  libgmsh4 libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2
  libharfbuzz-icu0 libharfbuzz0b libhdf4-0-alt libhdf5-103 libhdf5-cpp-103
  libhdf5-dev libhdf5-openmpi-103 libhwloc-dev libhwloc-plugins libhwloc15
  libibverbs-dev libibverbs1 libice6 libicu63 libidn11 libijs-0.35
  libilmbase24 libjbig0 libjbig2dec0 libjpeg-dev libjpeg62-turbo
  libjpeg62-turbo-dev libjs-jquery libjs-jquery-ui libjs-mathjax
  libjs-sphinxdoc libjs-underscore libjson-c4 libjxr0 libk5crypto3
  libkeyutils1 libkmlbase1 libkmldom1 libkmlengine1 libkpathsea6 libkrb5-3
  libkrb5support0 liblapack3 liblbfgsb0 liblcms2-2 libllvm9 libltdl-dev
  libltdl7 libmagic-mgc libmagic1 libmariadb3 libmetis5 libminizip1 libmpdec2
  libnetcdf-c++4 libnetcdf-c++4-1 libnetcdf-c++4-dev libnetcdf-cxx-legacy-dev
  libnetcdf-dev libnetcdf15 libnghttp2-14 libnl-3-200 libnl-3-dev
  libnl-route-3-200 libnl-route-3-dev libnspr4 libnss3
  libocct-data-exchange-7.3 libocct-foundation-7.3
  libocct-modeling-algorithms-7.3 libocct-modeling-data-7.3 libocct-ocaf-7.3
  libocct-visualization-7.3 libodbc1 libogdi4.1 libopenexr24 libopenjp2-7
  libopenmpi-dev libopenmpi3 libpaper-utils libpaper1 libpciaccess0
  libpdfbox-java libpipeline1 libpixman-1-0 libpmix2 libpng16-16 libpoppler82
  libpopt0 libpq5 libproj15 libpsl5 libptexenc1 libpython-dev libpython-stdlib
  libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev
  libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib
  libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib
  libpython3.8-minimal libpython3.8-stdlib libqhull7 libraw19 librtmp1
  libsensors-config libsensors5 libsigsegv2 libsilo-dev libsiloh5-0 libsm6
  libspatialite7 libssh2-1 libssl1.1 libsub-override-perl libsuperlu5
  libsynctex2 libsz2 libtbb2 libteckit0 libtexlua53 libtexluajit2 libtiff5
  libtinfo5 libtool libuchardet0 liburiparser1 libwebp6 libwebpmux3 libx11-6
  libx11-data libx11-xcb1 libxapian30 libxau6 libxaw7 libxcb-dri2-0
  libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shm0
  libxcb-sync1 libxcb1 libxcursor1 libxdamage1 libxdmcp6 libxerces-c3.2
  libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml2 libxmu6 libxnvctrl0
  libxpm4 libxrender1 libxshmfence1 libxt6 libxxf86vm1 libz3-4 libzzip-0-13
  lsb-release m4 man-db mariadb-common mime-support mpi-default-dev
  mysql-common ocl-icd-libopencl1 odbcinst odbcinst1debian2 openmpi-bin
  openmpi-common openssh-client openssl po-debconf poppler-data
  preview-latex-style proj-data python python-babel-localedata python-dev
  python-matplotlib-data python-minimal python2 python2-dev python2-minimal
  python2.7 python2.7-dev python2.7-minimal python3 python3-alabaster
  python3-attr python3-babel python3-certifi python3-chardet python3-cycler
  python3-dateutil python3-decorator python3-dev python3-distutils
  python3-docutils python3-gdal python3-idna python3-imagesize python3-jinja2
  python3-kiwisolver python3-lib2to3 python3-markupsafe python3-matplotlib
  python3-minimal python3-mpmath python3-numpy python3-packaging
  python3-pkg-resources python3-pygments python3-pyparsing python3-pyproj
  python3-requests python3-roman python3-scipy python3-six python3-sphinx
  python3-sympy python3-tz python3-urllib3 python3.7 python3.7-dev
  python3.7-minimal python3.8 python3.8-minimal
  sbuild-build-depends-python-escript-dummy scons sensible-utils sgml-base
  sphinx-common t1utils tex-common texlive texlive-base texlive-binaries
  texlive-fonts-recommended texlive-latex-base texlive-latex-extra
  texlive-latex-recommended texlive-pictures ttf-bitstream-vera ucf x11-common
  xdg-utils xml-core zip zlib1g-dev
The following packages will be upgraded:
  binutils binutils-arm-linux-gnueabihf binutils-common gcc-8-base libbinutils
  libctf0 libgnutls30 zlib1g
8 upgraded, 371 newly installed, 0 to remove and 28 not upgraded.
Need to get 392 MB of archives.
After this operation, 1920 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-C1ZYoC/apt_archive ./ sbuild-build-depends-python-escript-dummy 0.invalid.0 [1080 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.1+20191019-1 [316 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-4 [783 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf zlib1g armhf 1:1.2.11.dfsg-1.2 [84.6 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.0-2 [1261 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf poppler-data all 0.4.9-2 [1473 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-minimal armhf 2.7.17-1+b1 [395 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf python2.7-minimal armhf 2.7.17-1+b1 [1094 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf python2-minimal armhf 2.7.17-2 [41.4 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf python-minimal armhf 2.7.17-2 [21.1 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1d-2 [1268 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.64 [37.8 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-stdlib armhf 2.7.17-1+b1 [1820 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf python2.7 armhf 2.7.17-1+b1 [309 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libpython2-stdlib armhf 2.7.17-2 [20.9 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libpython-stdlib armhf 2.7.17-2 [20.9 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf python2 armhf 2.7.17-2 [41.7 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf python armhf 2.7.17-2 [22.9 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-minimal armhf 3.7.6-1+b1 [585 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf python3.7-minimal armhf 3.7.6-1+b1 [1525 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.7.5-3 [36.8 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libmpdec2 armhf 2.4.2-3 [68.1 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-stdlib armhf 3.7.6-1+b1 [1669 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf python3.7 armhf 3.7.6-1+b1 [351 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.7.5-3 [20.2 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.7.5-3 [62.1 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-minimal armhf 3.8.2-1 [744 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf python3.8-minimal armhf 3.8.2-1 [1628 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf sgml-base all 1.29.1 [15.0 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf tex-common all 6.13 [53.2 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libgnutls30 armhf 3.6.12-2 [1139 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf gcc-8-base armhf 8.3.0-29+rpi1 [194 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-4 [262 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-4 [112 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-4 [66.9 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libedit2 armhf 3.1-20191231-1 [79.2 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-6+b1 [61.5 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-6+b1 [112 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-6+b1 [316 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-6+b1 [134 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf openssh-client armhf 1:8.1p1-5 [713 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libctf0 armhf 2.34-3+rpi1 [34.9 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf binutils-arm-linux-gnueabihf armhf 2.34-3+rpi1 [1712 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libbinutils armhf 2.34-3+rpi1 [310 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf binutils armhf 2.34-3+rpi1 [59.0 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf binutils-common armhf 2.34-3+rpi1 [2063 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1d-2 [806 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20190110 [157 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf cpp-8 armhf 8.3.0-29+rpi1 [6793 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libgcc-8-dev armhf 8.3.0-29+rpi1 [595 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf gcc-8 armhf 8.3.0-29+rpi1 [7252 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-13 [513 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 12.9 [183 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.67-2 [104 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.6.3-2 [14.7 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.62.5-1 [1140 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-2 [7974 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.4+dfsg1-8 [593 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.9 [994 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.0-1 [78.3 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.0-1 [145 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 4.20191017 [94.4 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf distro-info-data all 0.43 [6540 B]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf xml-core all 0.18+nmu1 [23.8 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf docutils-common all 0.16+dfsg-1 [129 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libz3-4 armhf 4.8.7-4 [5477 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libllvm9 armhf 1:9.0.1-8+rpi1 [13.1 MB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libclang1-9 armhf 1:9.0.1-8+rpi1 [5581 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libxapian30 armhf 1.4.14-2 [951 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf doxygen armhf 1.8.16-2 [7624 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf ttf-bitstream-vera all 1.10-8 [352 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf fonts-lmodern all 2.004.5-6 [4539 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf fonts-lyx all 2.3.4.2-2 [200 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf fonts-mathjax all 2.7.4+dfsg-1 [2209 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf fonts-urw-base35 all 20170801.1-3 [6333 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf gdal-data all 3.0.4+dfsg-1 [430 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 9.2.1-25+rpi1 [231 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-8-dev armhf 8.3.0-29+rpi1 [249 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf gfortran-8 armhf 8.3.0-29+rpi1 [7210 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libgs9-common all 9.50~dfsg-5 [725 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common-data armhf 0.7-5 [122 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common3 armhf 0.7-5 [51.2 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libdbus-1-3 armhf 1.12.16-2+b1 [189 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libavahi-client3 armhf 0.7-5 [54.2 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libcups2 armhf 2.3.1-7 [308 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-2 [274 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.1-2 [330 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libidn11 armhf 1.33-2.2 [113 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libijs-0.35 armhf 0.35-15 [14.7 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf libjbig2dec0 armhf 0.17-1 [55.5 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf liblcms2-2 armhf 2.9-3 [116 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libopenjp2-7 armhf 2.3.1-1 [140 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libgs9 armhf 9.50~dfsg-5 [1884 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf ghostscript armhf 9.50~dfsg-5 [95.5 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-1 [108 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.13.1-5 [133 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.8-1 [298 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.8-1 [691 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libxfixes3 armhf 1:5.0.3-1 [20.6 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf libxcursor1 armhf 1:1.2.0-2 [34.2 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf libxinerama1 armhf 2:1.1.4-2 [17.3 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf libfltk1.3 armhf 1.3.4-10 [493 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libglvnd0 armhf 1.3.1-1 [55.2 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libdrm-common all 2.4.100-4+rpi1 [14.3 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf libdrm2 armhf 2.4.100-4+rpi1 [37.1 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf libglapi-mesa armhf 19.3.3-1 [79.0 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf libx11-xcb1 armhf 2:1.6.8-1 [190 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri2-0 armhf 1.13.1-5 [101 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri3-0 armhf 1.13.1-5 [100 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf libxcb-glx0 armhf 1.13.1-5 [115 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf libxcb-present0 armhf 1.13.1-5 [99.3 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf libxcb-sync1 armhf 1.13.1-5 [102 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf libxdamage1 armhf 1:1.1.5-1 [15.1 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.1 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf libdrm-amdgpu1 armhf 2.4.100-4+rpi1 [27.0 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf libdrm-nouveau2 armhf 2.4.100-4+rpi1 [24.7 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf libdrm-radeon1 armhf 2.4.100-4+rpi1 [28.9 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf libsensors-config all 1:3.6.0-2 [32.0 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf libsensors5 armhf 1:3.6.0-2 [50.2 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf libgl1-mesa-dri armhf 19.3.3-1 [5676 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf libglx-mesa0 armhf 19.3.3-1 [169 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf libglx0 armhf 1.3.1-1 [25.7 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf libgl1 armhf 1.3.1-1 [105 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf libfltk-gl1.3 armhf 1.3.4-10 [67.1 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf libfltk-images1.3 armhf 1.3.4-10 [58.7 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf libgl2ps1.4 armhf 1.4.0+dfsg1-2 [34.2 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf libglu1-mesa armhf 9.0.1-1 [127 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-1 [1597 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf libmetis5 armhf 5.1.0.dfsg-5 [131 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf libilmbase24 armhf 2.3.0-6 [69.0 kB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf libjxr0 armhf 1.1-6 [135 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf libopenexr24 armhf 2.3.0-6 [526 kB]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf libraw19 armhf 0.19.5-1 [275 kB]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf libwebpmux3 armhf 0.6.1-2 [94.2 kB]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf libfreeimage3 armhf 3.18.0+ds2-3 [250 kB]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf libtbb2 armhf 2020.1-2 [117 kB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf libocct-foundation-7.3 armhf 7.3.3+dfsg1-1+rpi1 [1117 kB]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf libocct-modeling-data-7.3 armhf 7.3.3+dfsg1-1+rpi1 [2265 kB]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf libocct-modeling-algorithms-7.3 armhf 7.3.3+dfsg1-1+rpi1 [6320 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf libxi6 armhf 2:1.7.9-1 [77.8 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+20 [252 kB]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1+b3 [156 kB]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf libxmu6 armhf 2:1.1.2-2+b3 [52.1 kB]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf libocct-visualization-7.3 armhf 7.3.3+dfsg1-1+rpi1 [1327 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf libocct-ocaf-7.3 armhf 7.3.3+dfsg1-1+rpi1 [1014 kB]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf libocct-data-exchange-7.3 armhf 7.3.3+dfsg1-1+rpi1 [3304 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf libgmsh4 armhf 4.4.1+ds1-2 [4553 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf gmsh armhf 4.4.1+ds1-2 [224 kB]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf hdf5-helpers armhf 1.10.4+repack-11 [35.3 kB]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf libnl-3-200 armhf 3.4.0-1 [55.0 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf libnl-route-3-200 armhf 3.4.0-1 [132 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf libibverbs1 armhf 28.0-1 [47.6 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf ibverbs-providers armhf 28.0-1 [24.2 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf libaec0 armhf 1.0.4-1 [20.0 kB]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf libsz2 armhf 1.0.4-1 [6664 B]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf libaec-dev armhf 1.0.4-1 [17.8 kB]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf libapache-pom-java all 18-1 [4676 B]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf libarpack2 armhf 3.7.0-3 [85.7 kB]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf libsuperlu5 armhf 5.2.1+dfsg1-4 [126 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf libarmadillo9 armhf 1:9.800.4+dfsg-1 [93.4 kB]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf libboost1.67-dev armhf 1.67.0-17 [8389 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf libboost-python1.67.0 armhf 1.67.0-17 [341 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7 armhf 2.7.17-1+b1 [883 kB]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.9-1 [119 kB]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-dev armhf 2.7.17-1+b1 [26.5 MB]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf libpython2-dev armhf 2.7.17-2 [21.0 kB]
Get:207 http://172.17.0.1/private bullseye-staging/main armhf libpython-dev armhf 2.7.17-2 [21.0 kB]
Get:208 http://172.17.0.1/private bullseye-staging/main armhf python2.7-dev armhf 2.7.17-1+b1 [294 kB]
Get:209 http://172.17.0.1/private bullseye-staging/main armhf python2-dev armhf 2.7.17-2 [1224 B]
Get:210 http://172.17.0.1/private bullseye-staging/main armhf python-dev armhf 2.7.17-2 [1196 B]
Get:211 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7 armhf 3.7.6-1+b1 [1256 kB]
Get:212 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-dev armhf 3.7.6-1+b1 [40.2 MB]
Get:213 http://172.17.0.1/private bullseye-staging/main armhf libpython3-dev armhf 3.7.5-3 [20.3 kB]
Get:214 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1.2 [203 kB]
Get:215 http://172.17.0.1/private bullseye-staging/main armhf python3.7-dev armhf 3.7.6-1+b1 [518 kB]
Get:216 http://172.17.0.1/private bullseye-staging/main armhf python3-dev armhf 3.7.5-3 [1260 B]
Get:217 http://172.17.0.1/private bullseye-staging/main armhf libboost-python1.67-dev armhf 1.67.0-17 [362 kB]
Get:218 http://172.17.0.1/private bullseye-staging/main armhf libboost-python-dev armhf 1.67.0.2+b11 [4548 B]
Get:219 http://172.17.0.1/private bullseye-staging/main armhf libboost-system1.67.0 armhf 1.67.0-17 [229 kB]
Get:220 http://172.17.0.1/private bullseye-staging/main armhf libboost-random1.67.0 armhf 1.67.0-17 [231 kB]
Get:221 http://172.17.0.1/private bullseye-staging/main armhf libboost-random1.67-dev armhf 1.67.0-17 [231 kB]
Get:222 http://172.17.0.1/private bullseye-staging/main armhf libboost-random-dev armhf 1.67.0.2+b11 [4252 B]
Get:223 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-6 [261 kB]
Get:224 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:225 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.13.1-5 [108 kB]
Get:226 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.13.1-5 [99.4 kB]
Get:227 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:228 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.40.0-1+b2 [74.2 kB]
Get:229 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:230 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:231 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:232 http://172.17.0.1/private bullseye-staging/main armhf libcurl3-gnutls armhf 7.68.0-1 [284 kB]
Get:233 http://172.17.0.1/private bullseye-staging/main armhf libcfitsio8 armhf 3.470-3 [484 kB]
Get:234 http://172.17.0.1/private bullseye-staging/main armhf libcharls2 armhf 2.0.0+dfsg-1 [52.0 kB]
Get:235 http://172.17.0.1/private bullseye-staging/main armhf libcommons-parent-java all 43-1 [10.8 kB]
Get:236 http://172.17.0.1/private bullseye-staging/main armhf libcommons-logging-java all 1.2-2 [62.2 kB]
Get:237 http://172.17.0.1/private bullseye-staging/main armhf libcurl4-gnutls-dev armhf 7.68.0-1 [358 kB]
Get:238 http://172.17.0.1/private bullseye-staging/main armhf libdap25 armhf 3.20.5-1 [474 kB]
Get:239 http://172.17.0.1/private bullseye-staging/main armhf libdapclient6v5 armhf 3.20.5-1 [189 kB]
Get:240 http://172.17.0.1/private bullseye-staging/main armhf libpopt0 armhf 1.16-14 [46.8 kB]
Get:241 http://172.17.0.1/private bullseye-staging/main armhf libepsilon1 armhf 0.9.2+dfsg-4 [36.4 kB]
Get:242 http://172.17.0.1/private bullseye-staging/main armhf libevent-2.1-7 armhf 2.1.11-stable-1 [165 kB]
Get:243 http://172.17.0.1/private bullseye-staging/main armhf libevent-core-2.1-7 armhf 2.1.11-stable-1 [124 kB]
Get:244 http://172.17.0.1/private bullseye-staging/main armhf libevent-extra-2.1-7 armhf 2.1.11-stable-1 [98.7 kB]
Get:245 http://172.17.0.1/private bullseye-staging/main armhf libevent-pthreads-2.1-7 armhf 2.1.11-stable-1 [54.7 kB]
Get:246 http://172.17.0.1/private bullseye-staging/main armhf libevent-openssl-2.1-7 armhf 2.1.11-stable-1 [59.7 kB]
Get:247 http://172.17.0.1/private bullseye-staging/main armhf libevent-dev armhf 2.1.11-stable-1 [279 kB]
Get:248 http://172.17.0.1/private bullseye-staging/main armhf libfontbox-java all 1:1.8.16-2 [211 kB]
Get:249 http://172.17.0.1/private bullseye-staging/main armhf libfreexl1 armhf 1.0.5-3 [31.8 kB]
Get:250 http://172.17.0.1/private bullseye-staging/main armhf libfyba0 armhf 4.1.1-6 [97.8 kB]
Get:251 http://172.17.0.1/private bullseye-staging/main armhf libgeos-3.8.0 armhf 3.8.0-1 [725 kB]
Get:252 http://172.17.0.1/private bullseye-staging/main armhf libgeos-c1v5 armhf 3.8.0-1 [339 kB]
Get:253 http://172.17.0.1/private bullseye-staging/main armhf proj-data all 6.3.1-1 [7673 kB]
Get:254 http://172.17.0.1/private bullseye-staging/main armhf libproj15 armhf 6.3.1-1 [787 kB]
Get:255 http://172.17.0.1/private bullseye-staging/main armhf libgeotiff5 armhf 1.5.1-2 [62.7 kB]
Get:256 http://172.17.0.1/private bullseye-staging/main armhf libgif7 armhf 5.1.9-1 [42.5 kB]
Get:257 http://172.17.0.1/private bullseye-staging/main armhf libhdf4-0-alt armhf 4.2.14-1+b6 [237 kB]
Get:258 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-103 armhf 1.10.4+repack-11 [1280 kB]
Get:259 http://172.17.0.1/private bullseye-staging/main armhf libjson-c4 armhf 0.13.1+dfsg-7 [33.3 kB]
Get:260 http://172.17.0.1/private bullseye-staging/main armhf libminizip1 armhf 1.1-8+b1 [18.3 kB]
Get:261 http://172.17.0.1/private bullseye-staging/main armhf liburiparser1 armhf 0.9.3-2 [39.2 kB]
Get:262 http://172.17.0.1/private bullseye-staging/main armhf libkmlbase1 armhf 1.3.0-8 [41.6 kB]
Get:263 http://172.17.0.1/private bullseye-staging/main armhf libkmldom1 armhf 1.3.0-8 [150 kB]
Get:264 http://172.17.0.1/private bullseye-staging/main armhf libkmlengine1 armhf 1.3.0-8 [66.1 kB]
Get:265 http://172.17.0.1/private bullseye-staging/main armhf mysql-common all 5.8+1.0.5 [7324 B]
Get:266 http://172.17.0.1/private bullseye-staging/main armhf mariadb-common all 1:10.3.22-1 [32.3 kB]
Get:267 http://172.17.0.1/private bullseye-staging/main armhf libmariadb3 armhf 1:10.3.22-1 [158 kB]
Get:268 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf15 armhf 1:4.7.3-1 [341 kB]
Get:269 http://172.17.0.1/private bullseye-staging/main armhf libltdl7 armhf 2.4.6-13 [388 kB]
Get:270 http://172.17.0.1/private bullseye-staging/main armhf libodbc1 armhf 2.3.6-0.1+b1 [187 kB]
Get:271 http://172.17.0.1/private bullseye-staging/main armhf libogdi4.1 armhf 4.1.0+ds-1 [170 kB]
Get:272 http://172.17.0.1/private bullseye-staging/main armhf libnspr4 armhf 2:4.24-1 [90.2 kB]
Get:273 http://172.17.0.1/private bullseye-staging/main armhf libnss3 armhf 2:3.49.1-1 [979 kB]
Get:274 http://172.17.0.1/private bullseye-staging/main armhf libpoppler82 armhf 0.71.0-6 [1370 kB]
Get:275 http://172.17.0.1/private bullseye-staging/main armhf libpq5 armhf 12.2-1 [154 kB]
Get:276 http://172.17.0.1/private bullseye-staging/main armhf libqhull7 armhf 2015.2-4 [175 kB]
Get:277 http://172.17.0.1/private bullseye-staging/main armhf libspatialite7 armhf 4.3.0a-6+b2 [1231 kB]
Get:278 http://172.17.0.1/private bullseye-staging/main armhf libxerces-c3.2 armhf 3.2.2+debian-1+b1 [707 kB]
Get:279 http://172.17.0.1/private bullseye-staging/main armhf odbcinst armhf 2.3.6-0.1+b1 [47.7 kB]
Get:280 http://172.17.0.1/private bullseye-staging/main armhf odbcinst1debian2 armhf 2.3.6-0.1+b1 [70.8 kB]
Get:281 http://172.17.0.1/private bullseye-staging/main armhf libgdal26 armhf 3.0.4+dfsg-1 [5311 kB]
Get:282 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.13-11 [70.1 kB]
Get:283 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.4-1+rpi1 [1308 kB]
Get:284 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz-icu0 armhf 2.6.4-1+rpi1 [976 kB]
Get:285 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-cpp-103 armhf 1.10.4+repack-11 [126 kB]
Get:286 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:287 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:288 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-dev armhf 1.10.4+repack-11 [2235 kB]
Get:289 http://172.17.0.1/private bullseye-staging/main armhf libhwloc15 armhf 2.1.0+dfsg-3+rpi1 [112 kB]
Get:290 http://172.17.0.1/private bullseye-staging/main armhf libpciaccess0 armhf 0.14-1 [51.0 kB]
Get:291 http://172.17.0.1/private bullseye-staging/main armhf libxnvctrl0 armhf 440.59-1 [25.0 kB]
Get:292 http://172.17.0.1/private bullseye-staging/main armhf ocl-icd-libopencl1 armhf 2.2.12-3 [35.9 kB]
Get:293 http://172.17.0.1/private bullseye-staging/main armhf libhwloc-plugins armhf 2.1.0+dfsg-3+rpi1 [18.6 kB]
Get:294 http://172.17.0.1/private bullseye-staging/main armhf libpmix2 armhf 3.1.4-1+b1 [370 kB]
Get:295 http://172.17.0.1/private bullseye-staging/main armhf libopenmpi3 armhf 4.0.2-5+rpi1 [1679 kB]
Get:296 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-openmpi-103 armhf 1.10.4+repack-11 [1329 kB]
Get:297 http://172.17.0.1/private bullseye-staging/main armhf libltdl-dev armhf 2.4.6-13 [159 kB]
Get:298 http://172.17.0.1/private bullseye-staging/main armhf libhwloc-dev armhf 2.1.0+dfsg-3+rpi1 [173 kB]
Get:299 http://172.17.0.1/private bullseye-staging/main armhf libnl-3-dev armhf 3.4.0-1 [92.4 kB]
Get:300 http://172.17.0.1/private bullseye-staging/main armhf libnl-route-3-dev armhf 3.4.0-1 [145 kB]
Get:301 http://172.17.0.1/private bullseye-staging/main armhf libibverbs-dev armhf 28.0-1 [199 kB]
Get:302 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery all 3.3.1~dfsg-3 [332 kB]
Get:303 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB]
Get:304 http://172.17.0.1/private bullseye-staging/main armhf libjs-mathjax all 2.7.4+dfsg-1 [5658 kB]
Get:305 http://172.17.0.1/private bullseye-staging/main armhf libjs-underscore all 1.9.1~dfsg-1 [99.4 kB]
Get:306 http://172.17.0.1/private bullseye-staging/main armhf libjs-sphinxdoc all 1.8.5-5 [96.7 kB]
Get:307 http://172.17.0.1/private bullseye-staging/main armhf libkpathsea6 armhf 2019.20190605.51237-3 [159 kB]
Get:308 http://172.17.0.1/private bullseye-staging/main armhf liblbfgsb0 armhf 3.0+dfsg.3-7 [26.1 kB]
Get:309 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf-c++4 armhf 4.2-11+b1 [29.1 kB]
Get:310 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf-c++4-1 armhf 4.3.1-2 [64.6 kB]
Get:311 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf-dev armhf 1:4.7.3-1 [92.1 kB]
Get:312 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf-c++4-dev armhf 4.3.1-2 [93.8 kB]
Get:313 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf-cxx-legacy-dev armhf 4.2-11+b1 [52.0 kB]
Get:314 http://172.17.0.1/private bullseye-staging/main armhf openmpi-common all 4.0.2-5+rpi1 [168 kB]
Get:315 http://172.17.0.1/private bullseye-staging/main armhf openmpi-bin armhf 4.0.2-5+rpi1 [185 kB]
Get:316 http://172.17.0.1/private bullseye-staging/main armhf libopenmpi-dev armhf 4.0.2-5+rpi1 [905 kB]
Get:317 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:318 http://172.17.0.1/private bullseye-staging/main armhf libpdfbox-java all 1:1.8.16-2 [5205 kB]
Get:319 http://172.17.0.1/private bullseye-staging/main armhf libptexenc1 armhf 2019.20190605.51237-3 [60.0 kB]
Get:320 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-stdlib armhf 3.8.2-1 [1597 kB]
Get:321 http://172.17.0.1/private bullseye-staging/main armhf libsiloh5-0 armhf 4.10.2.real-7 [297 kB]
Get:322 http://172.17.0.1/private bullseye-staging/main armhf libsilo-dev armhf 4.10.2.real-7 [1504 kB]
Get:323 http://172.17.0.1/private bullseye-staging/main armhf libsynctex2 armhf 2019.20190605.51237-3 [68.8 kB]
Get:324 http://172.17.0.1/private bullseye-staging/main armhf libteckit0 armhf 2.5.8+ds2-5 [245 kB]
Get:325 http://172.17.0.1/private bullseye-staging/main armhf libtexlua53 armhf 2019.20190605.51237-3 [99.7 kB]
Get:326 http://172.17.0.1/private bullseye-staging/main armhf libtexluajit2 armhf 2019.20190605.51237-3 [206 kB]
Get:327 http://172.17.0.1/private bullseye-staging/main armhf libxpm4 armhf 1:3.5.12-1 [43.6 kB]
Get:328 http://172.17.0.1/private bullseye-staging/main armhf libxaw7 armhf 2:1.0.13-1+b2 [163 kB]
Get:329 http://172.17.0.1/private bullseye-staging/main armhf libzzip-0-13 armhf 0.13.62-3.2 [51.6 kB]
Get:330 http://172.17.0.1/private bullseye-staging/main armhf lsb-release all 11.1.0+rpi1 [28.1 kB]
Get:331 http://172.17.0.1/private bullseye-staging/main armhf mpi-default-dev armhf 1.13 [5476 B]
Get:332 http://172.17.0.1/private bullseye-staging/main armhf preview-latex-style all 11.91-2 [201 kB]
Get:333 http://172.17.0.1/private bullseye-staging/main armhf python-babel-localedata all 2.8.0+dfsg.1-2 [4399 kB]
Get:334 http://172.17.0.1/private bullseye-staging/main armhf python-matplotlib-data all 3.1.2-2 [4139 kB]
Get:335 http://172.17.0.1/private bullseye-staging/main armhf python3-attr all 19.3.0-1 [43.1 kB]
Get:336 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 44.0.0-1 [155 kB]
Get:337 http://172.17.0.1/private bullseye-staging/main armhf python3-tz all 2019.3-1 [27.2 kB]
Get:338 http://172.17.0.1/private bullseye-staging/main armhf python3-babel all 2.8.0+dfsg.1-2 [99.8 kB]
Get:339 http://172.17.0.1/private bullseye-staging/main armhf python3-certifi all 2019.11.28-1 [149 kB]
Get:340 http://172.17.0.1/private bullseye-staging/main armhf python3-chardet all 3.0.4-4 [80.8 kB]
Get:341 http://172.17.0.1/private bullseye-staging/main armhf python3-six all 1.14.0-2 [16.7 kB]
Get:342 http://172.17.0.1/private bullseye-staging/main armhf python3-cycler all 0.10.0-3 [8084 B]
Get:343 http://172.17.0.1/private bullseye-staging/main armhf python3-dateutil all 2.7.3-3 [64.5 kB]
Get:344 http://172.17.0.1/private bullseye-staging/main armhf python3-decorator all 4.3.0-1.1 [14.5 kB]
Get:345 http://172.17.0.1/private bullseye-staging/main armhf python3-roman all 2.0.0-3 [8768 B]
Get:346 http://172.17.0.1/private bullseye-staging/main armhf python3-docutils all 0.16+dfsg-1 [383 kB]
Get:347 http://172.17.0.1/private bullseye-staging/main armhf python3.8 armhf 3.8.2-1 [410 kB]
Get:348 http://172.17.0.1/private bullseye-staging/main armhf python3-numpy armhf 1:1.17.4-5+b1 [4484 kB]
Get:349 http://172.17.0.1/private bullseye-staging/main armhf python3-gdal armhf 3.0.4+dfsg-1 [851 kB]
Get:350 http://172.17.0.1/private bullseye-staging/main armhf python3-idna all 2.6-2 [34.4 kB]
Get:351 http://172.17.0.1/private bullseye-staging/main armhf python3-imagesize all 1.2.0-1 [5764 B]
Get:352 http://172.17.0.1/private bullseye-staging/main armhf python3-markupsafe armhf 1.1.0-1+b1 [15.1 kB]
Get:353 http://172.17.0.1/private bullseye-staging/main armhf python3-jinja2 all 2.10.1-1 [107 kB]
Get:354 http://172.17.0.1/private bullseye-staging/main armhf python3-kiwisolver armhf 1.0.1-3 [245 kB]
Get:355 http://172.17.0.1/private bullseye-staging/main armhf python3-pyparsing all 2.4.6-1 [109 kB]
Get:356 http://172.17.0.1/private bullseye-staging/main armhf python3-matplotlib armhf 3.1.2-2 [5303 kB]
Get:357 http://172.17.0.1/private bullseye-staging/main armhf python3-mpmath all 1.1.0-1 [416 kB]
Get:358 http://172.17.0.1/private bullseye-staging/main armhf python3-packaging all 19.1-2 [23.9 kB]
Get:359 http://172.17.0.1/private bullseye-staging/main armhf python3-pygments all 2.3.1+dfsg-1 [594 kB]
Get:360 http://172.17.0.1/private bullseye-staging/main armhf python3-pyproj armhf 2.5.0+ds-1 [414 kB]
Get:361 http://172.17.0.1/private bullseye-staging/main armhf python3-urllib3 all 1.25.8-1 [104 kB]
Get:362 http://172.17.0.1/private bullseye-staging/main armhf python3-requests all 2.22.0-2 [67.0 kB]
Get:363 http://172.17.0.1/private bullseye-staging/main armhf python3-scipy armhf 1.3.3-3+b1 [12.1 MB]
Get:364 http://172.17.0.1/private bullseye-staging/main armhf sphinx-common all 1.8.5-5 [491 kB]
Get:365 http://172.17.0.1/private bullseye-staging/main armhf python3-alabaster all 0.7.8-1 [18.4 kB]
Get:366 http://172.17.0.1/private bullseye-staging/main armhf python3-sphinx all 1.8.5-5 [482 kB]
Get:367 http://172.17.0.1/private bullseye-staging/main armhf python3-sympy all 1.4-1 [3604 kB]
Get:368 http://172.17.0.1/private bullseye-staging/main armhf scons all 3.1.2-2 [564 kB]
Get:369 http://172.17.0.1/private bullseye-staging/main armhf t1utils armhf 1.41-3 [52.1 kB]
Get:370 http://172.17.0.1/private bullseye-staging/main armhf texlive-binaries armhf 2019.20190605.51237-3 [5748 kB]
Get:371 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-1 [73.3 kB]
Get:372 http://172.17.0.1/private bullseye-staging/main armhf texlive-base all 2019.20200218-1 [20.9 MB]
Get:373 http://172.17.0.1/private bullseye-staging/main armhf texlive-fonts-recommended all 2019.20200218-1 [5002 kB]
Get:374 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-base all 2019.20200218-1 [1019 kB]
Get:375 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-recommended all 2019.20200218-1 [15.7 MB]
Get:376 http://172.17.0.1/private bullseye-staging/main armhf texlive all 2019.20200218-1 [33.2 kB]
Get:377 http://172.17.0.1/private bullseye-staging/main armhf texlive-pictures all 2019.20200218-1 [4526 kB]
Get:378 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-extra all 2019.202000218-1 [12.9 MB]
Get:379 http://172.17.0.1/private bullseye-staging/main armhf zip armhf 3.0-11 [212 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 392 MB in 41s (9482 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 12256 files and directories currently installed.)
Preparing to unpack .../0-libbsd0_0.10.0-1_armhf.deb ...
Unpacking libbsd0:armhf (0.10.0-1) ...
Selecting previously unselected package libtinfo5:armhf.
Preparing to unpack .../1-libtinfo5_6.1+20191019-1_armhf.deb ...
Unpacking libtinfo5:armhf (6.1+20191019-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../2-bsdmainutils_11.1.2_armhf.deb ...
Unpacking bsdmainutils (11.1.2) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../3-libuchardet0_0.0.6-3_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.6-3) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../4-groff-base_1.22.4-4_armhf.deb ...
Unpacking groff-base (1.22.4-4) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../5-libpipeline1_1.5.2-2_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.2-2) ...
Preparing to unpack .../6-zlib1g_1%3a1.2.11.dfsg-1.2_armhf.deb ...
Unpacking zlib1g:armhf (1:1.2.11.dfsg-1.2) over (1:1.2.11.dfsg-1) ...
Setting up zlib1g:armhf (1:1.2.11.dfsg-1.2) ...
Selecting previously unselected package man-db.
(Reading database ... 12587 files and directories currently installed.)
Preparing to unpack .../00-man-db_2.9.0-2_armhf.deb ...
Unpacking man-db (2.9.0-2) ...
Selecting previously unselected package poppler-data.
Preparing to unpack .../01-poppler-data_0.4.9-2_all.deb ...
Unpacking poppler-data (0.4.9-2) ...
Selecting previously unselected package libpython2.7-minimal:armhf.
Preparing to unpack .../02-libpython2.7-minimal_2.7.17-1+b1_armhf.deb ...
Unpacking libpython2.7-minimal:armhf (2.7.17-1+b1) ...
Selecting previously unselected package python2.7-minimal.
Preparing to unpack .../03-python2.7-minimal_2.7.17-1+b1_armhf.deb ...
Unpacking python2.7-minimal (2.7.17-1+b1) ...
Selecting previously unselected package python2-minimal.
Preparing to unpack .../04-python2-minimal_2.7.17-2_armhf.deb ...
Unpacking python2-minimal (2.7.17-2) ...
Selecting previously unselected package python-minimal.
Preparing to unpack .../05-python-minimal_2.7.17-2_armhf.deb ...
Unpacking python-minimal (2.7.17-2) ...
Selecting previously unselected package libssl1.1:armhf.
Preparing to unpack .../06-libssl1.1_1.1.1d-2_armhf.deb ...
Unpacking libssl1.1:armhf (1.1.1d-2) ...
Selecting previously unselected package mime-support.
Preparing to unpack .../07-mime-support_3.64_all.deb ...
Unpacking mime-support (3.64) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../08-libexpat1_2.2.9-1_armhf.deb ...
Unpacking libexpat1:armhf (2.2.9-1) ...
Selecting previously unselected package libpython2.7-stdlib:armhf.
Preparing to unpack .../09-libpython2.7-stdlib_2.7.17-1+b1_armhf.deb ...
Unpacking libpython2.7-stdlib:armhf (2.7.17-1+b1) ...
Selecting previously unselected package python2.7.
Preparing to unpack .../10-python2.7_2.7.17-1+b1_armhf.deb ...
Unpacking python2.7 (2.7.17-1+b1) ...
Selecting previously unselected package libpython2-stdlib:armhf.
Preparing to unpack .../11-libpython2-stdlib_2.7.17-2_armhf.deb ...
Unpacking libpython2-stdlib:armhf (2.7.17-2) ...
Selecting previously unselected package libpython-stdlib:armhf.
Preparing to unpack .../12-libpython-stdlib_2.7.17-2_armhf.deb ...
Unpacking libpython-stdlib:armhf (2.7.17-2) ...
Setting up libpython2.7-minimal:armhf (2.7.17-1+b1) ...
Setting up python2.7-minimal (2.7.17-1+b1) ...
Setting up python2-minimal (2.7.17-2) ...
Selecting previously unselected package python2.
(Reading database ... 14243 files and directories currently installed.)
Preparing to unpack .../python2_2.7.17-2_armhf.deb ...
Unpacking python2 (2.7.17-2) ...
Setting up python-minimal (2.7.17-2) ...
Selecting previously unselected package python.
(Reading database ... 14276 files and directories currently installed.)
Preparing to unpack .../python_2.7.17-2_armhf.deb ...
Unpacking python (2.7.17-2) ...
Selecting previously unselected package libpython3.7-minimal:armhf.
Preparing to unpack .../libpython3.7-minimal_3.7.6-1+b1_armhf.deb ...
Unpacking libpython3.7-minimal:armhf (3.7.6-1+b1) ...
Selecting previously unselected package python3.7-minimal.
Preparing to unpack .../python3.7-minimal_3.7.6-1+b1_armhf.deb ...
Unpacking python3.7-minimal (3.7.6-1+b1) ...
Setting up libssl1.1:armhf (1.1.1d-2) ...
Setting up libpython3.7-minimal:armhf (3.7.6-1+b1) ...
Setting up libexpat1:armhf (2.2.9-1) ...
Setting up python3.7-minimal (3.7.6-1+b1) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 14532 files and directories currently installed.)
Preparing to unpack .../python3-minimal_3.7.5-3_armhf.deb ...
Unpacking python3-minimal (3.7.5-3) ...
Selecting previously unselected package libmpdec2:armhf.
Preparing to unpack .../libmpdec2_2.4.2-3_armhf.deb ...
Unpacking libmpdec2:armhf (2.4.2-3) ...
Selecting previously unselected package libpython3.7-stdlib:armhf.
Preparing to unpack .../libpython3.7-stdlib_3.7.6-1+b1_armhf.deb ...
Unpacking libpython3.7-stdlib:armhf (3.7.6-1+b1) ...
Selecting previously unselected package python3.7.
Preparing to unpack .../python3.7_3.7.6-1+b1_armhf.deb ...
Unpacking python3.7 (3.7.6-1+b1) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../libpython3-stdlib_3.7.5-3_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.7.5-3) ...
Setting up python3-minimal (3.7.5-3) ...
Selecting previously unselected package python3.
(Reading database ... 14946 files and directories currently installed.)
Preparing to unpack .../0-python3_3.7.5-3_armhf.deb ...
Unpacking python3 (3.7.5-3) ...
Selecting previously unselected package libpython3.8-minimal:armhf.
Preparing to unpack .../1-libpython3.8-minimal_3.8.2-1_armhf.deb ...
Unpacking libpython3.8-minimal:armhf (3.8.2-1) ...
Selecting previously unselected package python3.8-minimal.
Preparing to unpack .../2-python3.8-minimal_3.8.2-1_armhf.deb ...
Unpacking python3.8-minimal (3.8.2-1) ...
Selecting previously unselected package sgml-base.
Preparing to unpack .../3-sgml-base_1.29.1_all.deb ...
Unpacking sgml-base (1.29.1) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../4-sensible-utils_0.0.12+nmu1_all.deb ...
Unpacking sensible-utils (0.0.12+nmu1) ...
Selecting previously unselected package ucf.
Preparing to unpack .../5-ucf_3.0038+nmu1_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0038+nmu1) ...
Selecting previously unselected package tex-common.
Preparing to unpack .../6-tex-common_6.13_all.deb ...
Unpacking tex-common (6.13) ...
Preparing to unpack .../7-libgnutls30_3.6.12-2_armhf.deb ...
Unpacking libgnutls30:armhf (3.6.12-2) over (3.6.11.1-2) ...
Setting up libgnutls30:armhf (3.6.12-2) ...
(Reading database ... 15381 files and directories currently installed.)
Preparing to unpack .../000-gcc-8-base_8.3.0-29+rpi1_armhf.deb ...
Unpacking gcc-8-base:armhf (8.3.0-29+rpi1) over (8.3.0-26+rpi1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../001-libmagic-mgc_1%3a5.38-4_armhf.deb ...
Unpacking libmagic-mgc (1:5.38-4) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../002-libmagic1_1%3a5.38-4_armhf.deb ...
Unpacking libmagic1:armhf (1:5.38-4) ...
Selecting previously unselected package file.
Preparing to unpack .../003-file_1%3a5.38-4_armhf.deb ...
Unpacking file (1:5.38-4) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../004-gettext-base_0.19.8.1-10_armhf.deb ...
Unpacking gettext-base (0.19.8.1-10) ...
Selecting previously unselected package libedit2:armhf.
Preparing to unpack .../005-libedit2_3.1-20191231-1_armhf.deb ...
Unpacking libedit2:armhf (3.1-20191231-1) ...
Selecting previously unselected package libkeyutils1:armhf.
Preparing to unpack .../006-libkeyutils1_1.6.1-2_armhf.deb ...
Unpacking libkeyutils1:armhf (1.6.1-2) ...
Selecting previously unselected package libkrb5support0:armhf.
Preparing to unpack .../007-libkrb5support0_1.17-6+b1_armhf.deb ...
Unpacking libkrb5support0:armhf (1.17-6+b1) ...
Selecting previously unselected package libk5crypto3:armhf.
Preparing to unpack .../008-libk5crypto3_1.17-6+b1_armhf.deb ...
Unpacking libk5crypto3:armhf (1.17-6+b1) ...
Selecting previously unselected package libkrb5-3:armhf.
Preparing to unpack .../009-libkrb5-3_1.17-6+b1_armhf.deb ...
Unpacking libkrb5-3:armhf (1.17-6+b1) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Preparing to unpack .../010-libgssapi-krb5-2_1.17-6+b1_armhf.deb ...
Unpacking libgssapi-krb5-2:armhf (1.17-6+b1) ...
Selecting previously unselected package openssh-client.
Preparing to unpack .../011-openssh-client_1%3a8.1p1-5_armhf.deb ...
Unpacking openssh-client (1:8.1p1-5) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../012-libsigsegv2_2.12-2_armhf.deb ...
Unpacking libsigsegv2:armhf (2.12-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../013-m4_1.4.18-4_armhf.deb ...
Unpacking m4 (1.4.18-4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../014-autoconf_2.69-11.1_all.deb ...
Unpacking autoconf (2.69-11.1) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../015-autotools-dev_20180224.1_all.deb ...
Unpacking autotools-dev (20180224.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../016-automake_1%3a1.16.1-4_all.deb ...
Unpacking automake (1:1.16.1-4) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../017-autopoint_0.19.8.1-10_all.deb ...
Unpacking autopoint (0.19.8.1-10) ...
Preparing to unpack .../018-libctf0_2.34-3+rpi1_armhf.deb ...
Unpacking libctf0:armhf (2.34-3+rpi1) over (2.33.90.20200122-2+rpi1) ...
Preparing to unpack .../019-binutils-arm-linux-gnueabihf_2.34-3+rpi1_armhf.deb ...
Unpacking binutils-arm-linux-gnueabihf (2.34-3+rpi1) over (2.33.90.20200122-2+rpi1) ...
Preparing to unpack .../020-libbinutils_2.34-3+rpi1_armhf.deb ...
Unpacking libbinutils:armhf (2.34-3+rpi1) over (2.33.90.20200122-2+rpi1) ...
Preparing to unpack .../021-binutils_2.34-3+rpi1_armhf.deb ...
Unpacking binutils (2.34-3+rpi1) over (2.33.90.20200122-2+rpi1) ...
Preparing to unpack .../022-binutils-common_2.34-3+rpi1_armhf.deb ...
Unpacking binutils-common:armhf (2.34-3+rpi1) over (2.33.90.20200122-2+rpi1) ...
Selecting previously unselected package openssl.
Preparing to unpack .../023-openssl_1.1.1d-2_armhf.deb ...
Unpacking openssl (1.1.1d-2) ...
Selecting previously unselected package ca-certificates.
Preparing to unpack .../024-ca-certificates_20190110_all.deb ...
Unpacking ca-certificates (20190110) ...
Selecting previously unselected package cpp-8.
Preparing to unpack .../025-cpp-8_8.3.0-29+rpi1_armhf.deb ...
Unpacking cpp-8 (8.3.0-29+rpi1) ...
Selecting previously unselected package libgcc-8-dev:armhf.
Preparing to unpack .../026-libgcc-8-dev_8.3.0-29+rpi1_armhf.deb ...
Unpacking libgcc-8-dev:armhf (8.3.0-29+rpi1) ...
Selecting previously unselected package gcc-8.
Preparing to unpack .../027-gcc-8_8.3.0-29+rpi1_armhf.deb ...
Unpacking gcc-8 (8.3.0-29+rpi1) ...
Selecting previously unselected package libtool.
Preparing to unpack .../028-libtool_2.4.6-13_all.deb ...
Unpacking libtool (2.4.6-13) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../029-dh-autoreconf_19_all.deb ...
Unpacking dh-autoreconf (19) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../030-libdebhelper-perl_12.9_all.deb ...
Unpacking libdebhelper-perl (12.9) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../031-libarchive-zip-perl_1.67-2_all.deb ...
Unpacking libarchive-zip-perl (1.67-2) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../032-libsub-override-perl_0.09-2_all.deb ...
Unpacking libsub-override-perl (0.09-2) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../033-libfile-stripnondeterminism-perl_1.6.3-2_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.6.3-2) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../034-dh-strip-nondeterminism_1.6.3-2_all.deb ...
Unpacking dh-strip-nondeterminism (1.6.3-2) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../035-libelf1_0.176-1.1_armhf.deb ...
Unpacking libelf1:armhf (0.176-1.1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../036-dwz_0.13-5_armhf.deb ...
Unpacking dwz (0.13-5) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../037-libglib2.0-0_2.62.5-1_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.62.5-1) ...
Selecting previously unselected package libicu63:armhf.
Preparing to unpack .../038-libicu63_63.2-2_armhf.deb ...
Unpacking libicu63:armhf (63.2-2) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../039-libxml2_2.9.4+dfsg1-8_armhf.deb ...
Unpacking libxml2:armhf (2.9.4+dfsg1-8) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../040-libcroco3_0.6.13-1_armhf.deb ...
Unpacking libcroco3:armhf (0.6.13-1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../041-gettext_0.19.8.1-10_armhf.deb ...
Unpacking gettext (0.19.8.1-10) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../042-intltool-debian_0.35.0+20060710.5_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.5) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../043-po-debconf_1.0.21_all.deb ...
Unpacking po-debconf (1.0.21) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../044-debhelper_12.9_all.deb ...
Unpacking debhelper (12.9) ...
Selecting previously unselected package python3-lib2to3.
Preparing to unpack .../045-python3-lib2to3_3.8.0-1_all.deb ...
Unpacking python3-lib2to3 (3.8.0-1) ...
Selecting previously unselected package python3-distutils.
Preparing to unpack .../046-python3-distutils_3.8.0-1_all.deb ...
Unpacking python3-distutils (3.8.0-1) ...
Selecting previously unselected package dh-python.
Preparing to unpack .../047-dh-python_4.20191017_all.deb ...
Unpacking dh-python (4.20191017) ...
Selecting previously unselected package distro-info-data.
Preparing to unpack .../048-distro-info-data_0.43_all.deb ...
Unpacking distro-info-data (0.43) ...
Selecting previously unselected package xml-core.
Preparing to unpack .../049-xml-core_0.18+nmu1_all.deb ...
Unpacking xml-core (0.18+nmu1) ...
Selecting previously unselected package docutils-common.
Preparing to unpack .../050-docutils-common_0.16+dfsg-1_all.deb ...
Unpacking docutils-common (0.16+dfsg-1) ...
Selecting previously unselected package libz3-4:armhf.
Preparing to unpack .../051-libz3-4_4.8.7-4_armhf.deb ...
Unpacking libz3-4:armhf (4.8.7-4) ...
Selecting previously unselected package libllvm9:armhf.
Preparing to unpack .../052-libllvm9_1%3a9.0.1-8+rpi1_armhf.deb ...
Unpacking libllvm9:armhf (1:9.0.1-8+rpi1) ...
Selecting previously unselected package libclang1-9.
Preparing to unpack .../053-libclang1-9_1%3a9.0.1-8+rpi1_armhf.deb ...
Unpacking libclang1-9 (1:9.0.1-8+rpi1) ...
Selecting previously unselected package libxapian30:armhf.
Preparing to unpack .../054-libxapian30_1.4.14-2_armhf.deb ...
Unpacking libxapian30:armhf (1.4.14-2) ...
Selecting previously unselected package doxygen.
Preparing to unpack .../055-doxygen_1.8.16-2_armhf.deb ...
Unpacking doxygen (1.8.16-2) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../056-fonts-dejavu-core_2.37-1_all.deb ...
Unpacking fonts-dejavu-core (2.37-1) ...
Selecting previously unselected package ttf-bitstream-vera.
Preparing to unpack .../057-ttf-bitstream-vera_1.10-8_all.deb ...
Unpacking ttf-bitstream-vera (1.10-8) ...
Selecting previously unselected package fontconfig-config.
Preparing to unpack .../058-fontconfig-config_2.13.1-2_all.deb ...
Unpacking fontconfig-config (2.13.1-2) ...
Selecting previously unselected package fonts-lmodern.
Preparing to unpack .../059-fonts-lmodern_2.004.5-6_all.deb ...
Unpacking fonts-lmodern (2.004.5-6) ...
Selecting previously unselected package fonts-lyx.
Preparing to unpack .../060-fonts-lyx_2.3.4.2-2_all.deb ...
Unpacking fonts-lyx (2.3.4.2-2) ...
Selecting previously unselected package fonts-mathjax.
Preparing to unpack .../061-fonts-mathjax_2.7.4+dfsg-1_all.deb ...
Unpacking fonts-mathjax (2.7.4+dfsg-1) ...
Selecting previously unselected package fonts-urw-base35.
Preparing to unpack .../062-fonts-urw-base35_20170801.1-3_all.deb ...
Unpacking fonts-urw-base35 (20170801.1-3) ...
Selecting previously unselected package gdal-data.
Preparing to unpack .../063-gdal-data_3.0.4+dfsg-1_all.deb ...
Unpacking gdal-data (3.0.4+dfsg-1) ...
Selecting previously unselected package libgfortran5:armhf.
Preparing to unpack .../064-libgfortran5_9.2.1-25+rpi1_armhf.deb ...
Unpacking libgfortran5:armhf (9.2.1-25+rpi1) ...
Selecting previously unselected package libgfortran-8-dev:armhf.
Preparing to unpack .../065-libgfortran-8-dev_8.3.0-29+rpi1_armhf.deb ...
Unpacking libgfortran-8-dev:armhf (8.3.0-29+rpi1) ...
Selecting previously unselected package gfortran-8.
Preparing to unpack .../066-gfortran-8_8.3.0-29+rpi1_armhf.deb ...
Unpacking gfortran-8 (8.3.0-29+rpi1) ...
Selecting previously unselected package libgs9-common.
Preparing to unpack .../067-libgs9-common_9.50~dfsg-5_all.deb ...
Unpacking libgs9-common (9.50~dfsg-5) ...
Selecting previously unselected package libavahi-common-data:armhf.
Preparing to unpack .../068-libavahi-common-data_0.7-5_armhf.deb ...
Unpacking libavahi-common-data:armhf (0.7-5) ...
Selecting previously unselected package libavahi-common3:armhf.
Preparing to unpack .../069-libavahi-common3_0.7-5_armhf.deb ...
Unpacking libavahi-common3:armhf (0.7-5) ...
Selecting previously unselected package libdbus-1-3:armhf.
Preparing to unpack .../070-libdbus-1-3_1.12.16-2+b1_armhf.deb ...
Unpacking libdbus-1-3:armhf (1.12.16-2+b1) ...
Selecting previously unselected package libavahi-client3:armhf.
Preparing to unpack .../071-libavahi-client3_0.7-5_armhf.deb ...
Unpacking libavahi-client3:armhf (0.7-5) ...
Selecting previously unselected package libcups2:armhf.
Preparing to unpack .../072-libcups2_2.3.1-7_armhf.deb ...
Unpacking libcups2:armhf (2.3.1-7) ...
Selecting previously unselected package libpng16-16:armhf.
Preparing to unpack .../073-libpng16-16_1.6.37-2_armhf.deb ...
Unpacking libpng16-16:armhf (1.6.37-2) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../074-libfreetype6_2.10.1-2_armhf.deb ...
Unpacking libfreetype6:armhf (2.10.1-2) ...
Selecting previously unselected package libfontconfig1:armhf.
Preparing to unpack .../075-libfontconfig1_2.13.1-2_armhf.deb ...
Unpacking libfontconfig1:armhf (2.13.1-2) ...
Selecting previously unselected package libidn11:armhf.
Preparing to unpack .../076-libidn11_1.33-2.2_armhf.deb ...
Unpacking libidn11:armhf (1.33-2.2) ...
Selecting previously unselected package libijs-0.35:armhf.
Preparing to unpack .../077-libijs-0.35_0.35-15_armhf.deb ...
Unpacking libijs-0.35:armhf (0.35-15) ...
Selecting previously unselected package libjbig2dec0:armhf.
Preparing to unpack .../078-libjbig2dec0_0.17-1_armhf.deb ...
Unpacking libjbig2dec0:armhf (0.17-1) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../079-libjpeg62-turbo_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package liblcms2-2:armhf.
Preparing to unpack .../080-liblcms2-2_2.9-3_armhf.deb ...
Unpacking liblcms2-2:armhf (2.9-3) ...
Selecting previously unselected package libopenjp2-7:armhf.
Preparing to unpack .../081-libopenjp2-7_2.3.1-1_armhf.deb ...
Unpacking libopenjp2-7:armhf (2.3.1-1) ...
Selecting previously unselected package libpaper1:armhf.
Preparing to unpack .../082-libpaper1_1.1.28_armhf.deb ...
Unpacking libpaper1:armhf (1.1.28) ...
Selecting previously unselected package libjbig0:armhf.
Preparing to unpack .../083-libjbig0_2.1-3.1+b2_armhf.deb ...
Unpacking libjbig0:armhf (2.1-3.1+b2) ...
Selecting previously unselected package libwebp6:armhf.
Preparing to unpack .../084-libwebp6_0.6.1-2_armhf.deb ...
Unpacking libwebp6:armhf (0.6.1-2) ...
Selecting previously unselected package libtiff5:armhf.
Preparing to unpack .../085-libtiff5_4.1.0+git191117-2_armhf.deb ...
Unpacking libtiff5:armhf (4.1.0+git191117-2) ...
Selecting previously unselected package libgs9:armhf.
Preparing to unpack .../086-libgs9_9.50~dfsg-5_armhf.deb ...
Unpacking libgs9:armhf (9.50~dfsg-5) ...
Selecting previously unselected package ghostscript.
Preparing to unpack .../087-ghostscript_9.50~dfsg-5_armhf.deb ...
Unpacking ghostscript (9.50~dfsg-5) ...
Selecting previously unselected package libblas3:armhf.
Preparing to unpack .../088-libblas3_3.9.0-1_armhf.deb ...
Unpacking libblas3:armhf (3.9.0-1) ...
Selecting previously unselected package libxau6:armhf.
Preparing to unpack .../089-libxau6_1%3a1.0.8-1+b2_armhf.deb ...
Unpacking libxau6:armhf (1:1.0.8-1+b2) ...
Selecting previously unselected package libxdmcp6:armhf.
Preparing to unpack .../090-libxdmcp6_1%3a1.1.2-3_armhf.deb ...
Unpacking libxdmcp6:armhf (1:1.1.2-3) ...
Selecting previously unselected package libxcb1:armhf.
Preparing to unpack .../091-libxcb1_1.13.1-5_armhf.deb ...
Unpacking libxcb1:armhf (1.13.1-5) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../092-libx11-data_2%3a1.6.8-1_all.deb ...
Unpacking libx11-data (2:1.6.8-1) ...
Selecting previously unselected package libx11-6:armhf.
Preparing to unpack .../093-libx11-6_2%3a1.6.8-1_armhf.deb ...
Unpacking libx11-6:armhf (2:1.6.8-1) ...
Selecting previously unselected package libxfixes3:armhf.
Preparing to unpack .../094-libxfixes3_1%3a5.0.3-1_armhf.deb ...
Unpacking libxfixes3:armhf (1:5.0.3-1) ...
Selecting previously unselected package libxrender1:armhf.
Preparing to unpack .../095-libxrender1_1%3a0.9.10-1_armhf.deb ...
Unpacking libxrender1:armhf (1:0.9.10-1) ...
Selecting previously unselected package libxcursor1:armhf.
Preparing to unpack .../096-libxcursor1_1%3a1.2.0-2_armhf.deb ...
Unpacking libxcursor1:armhf (1:1.2.0-2) ...
Selecting previously unselected package libxext6:armhf.
Preparing to unpack .../097-libxext6_2%3a1.3.3-1+b2_armhf.deb ...
Unpacking libxext6:armhf (2:1.3.3-1+b2) ...
Selecting previously unselected package libxft2:armhf.
Preparing to unpack .../098-libxft2_2.3.2-2_armhf.deb ...
Unpacking libxft2:armhf (2.3.2-2) ...
Selecting previously unselected package libxinerama1:armhf.
Preparing to unpack .../099-libxinerama1_2%3a1.1.4-2_armhf.deb ...
Unpacking libxinerama1:armhf (2:1.1.4-2) ...
Selecting previously unselected package libfltk1.3:armhf.
Preparing to unpack .../100-libfltk1.3_1.3.4-10_armhf.deb ...
Unpacking libfltk1.3:armhf (1.3.4-10) ...
Selecting previously unselected package libglvnd0:armhf.
Preparing to unpack .../101-libglvnd0_1.3.1-1_armhf.deb ...
Unpacking libglvnd0:armhf (1.3.1-1) ...
Selecting previously unselected package libdrm-common.
Preparing to unpack .../102-libdrm-common_2.4.100-4+rpi1_all.deb ...
Unpacking libdrm-common (2.4.100-4+rpi1) ...
Selecting previously unselected package libdrm2:armhf.
Preparing to unpack .../103-libdrm2_2.4.100-4+rpi1_armhf.deb ...
Unpacking libdrm2:armhf (2.4.100-4+rpi1) ...
Selecting previously unselected package libglapi-mesa:armhf.
Preparing to unpack .../104-libglapi-mesa_19.3.3-1_armhf.deb ...
Unpacking libglapi-mesa:armhf (19.3.3-1) ...
Selecting previously unselected package libx11-xcb1:armhf.
Preparing to unpack .../105-libx11-xcb1_2%3a1.6.8-1_armhf.deb ...
Unpacking libx11-xcb1:armhf (2:1.6.8-1) ...
Selecting previously unselected package libxcb-dri2-0:armhf.
Preparing to unpack .../106-libxcb-dri2-0_1.13.1-5_armhf.deb ...
Unpacking libxcb-dri2-0:armhf (1.13.1-5) ...
Selecting previously unselected package libxcb-dri3-0:armhf.
Preparing to unpack .../107-libxcb-dri3-0_1.13.1-5_armhf.deb ...
Unpacking libxcb-dri3-0:armhf (1.13.1-5) ...
Selecting previously unselected package libxcb-glx0:armhf.
Preparing to unpack .../108-libxcb-glx0_1.13.1-5_armhf.deb ...
Unpacking libxcb-glx0:armhf (1.13.1-5) ...
Selecting previously unselected package libxcb-present0:armhf.
Preparing to unpack .../109-libxcb-present0_1.13.1-5_armhf.deb ...
Unpacking libxcb-present0:armhf (1.13.1-5) ...
Selecting previously unselected package libxcb-sync1:armhf.
Preparing to unpack .../110-libxcb-sync1_1.13.1-5_armhf.deb ...
Unpacking libxcb-sync1:armhf (1.13.1-5) ...
Selecting previously unselected package libxdamage1:armhf.
Preparing to unpack .../111-libxdamage1_1%3a1.1.5-1_armhf.deb ...
Unpacking libxdamage1:armhf (1:1.1.5-1) ...
Selecting previously unselected package libxshmfence1:armhf.
Preparing to unpack .../112-libxshmfence1_1.3-1_armhf.deb ...
Unpacking libxshmfence1:armhf (1.3-1) ...
Selecting previously unselected package libxxf86vm1:armhf.
Preparing to unpack .../113-libxxf86vm1_1%3a1.1.4-1+b2_armhf.deb ...
Unpacking libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Selecting previously unselected package libdrm-amdgpu1:armhf.
Preparing to unpack .../114-libdrm-amdgpu1_2.4.100-4+rpi1_armhf.deb ...
Unpacking libdrm-amdgpu1:armhf (2.4.100-4+rpi1) ...
Selecting previously unselected package libdrm-nouveau2:armhf.
Preparing to unpack .../115-libdrm-nouveau2_2.4.100-4+rpi1_armhf.deb ...
Unpacking libdrm-nouveau2:armhf (2.4.100-4+rpi1) ...
Selecting previously unselected package libdrm-radeon1:armhf.
Preparing to unpack .../116-libdrm-radeon1_2.4.100-4+rpi1_armhf.deb ...
Unpacking libdrm-radeon1:armhf (2.4.100-4+rpi1) ...
Selecting previously unselected package libsensors-config.
Preparing to unpack .../117-libsensors-config_1%3a3.6.0-2_all.deb ...
Unpacking libsensors-config (1:3.6.0-2) ...
Selecting previously unselected package libsensors5:armhf.
Preparing to unpack .../118-libsensors5_1%3a3.6.0-2_armhf.deb ...
Unpacking libsensors5:armhf (1:3.6.0-2) ...
Selecting previously unselected package libgl1-mesa-dri:armhf.
Preparing to unpack .../119-libgl1-mesa-dri_19.3.3-1_armhf.deb ...
Unpacking libgl1-mesa-dri:armhf (19.3.3-1) ...
Selecting previously unselected package libglx-mesa0:armhf.
Preparing to unpack .../120-libglx-mesa0_19.3.3-1_armhf.deb ...
Unpacking libglx-mesa0:armhf (19.3.3-1) ...
Selecting previously unselected package libglx0:armhf.
Preparing to unpack .../121-libglx0_1.3.1-1_armhf.deb ...
Unpacking libglx0:armhf (1.3.1-1) ...
Selecting previously unselected package libgl1:armhf.
Preparing to unpack .../122-libgl1_1.3.1-1_armhf.deb ...
Unpacking libgl1:armhf (1.3.1-1) ...
Selecting previously unselected package libfltk-gl1.3:armhf.
Preparing to unpack .../123-libfltk-gl1.3_1.3.4-10_armhf.deb ...
Unpacking libfltk-gl1.3:armhf (1.3.4-10) ...
Selecting previously unselected package libfltk-images1.3:armhf.
Preparing to unpack .../124-libfltk-images1.3_1.3.4-10_armhf.deb ...
Unpacking libfltk-images1.3:armhf (1.3.4-10) ...
Selecting previously unselected package libgl2ps1.4.
Preparing to unpack .../125-libgl2ps1.4_1.4.0+dfsg1-2_armhf.deb ...
Unpacking libgl2ps1.4 (1.4.0+dfsg1-2) ...
Selecting previously unselected package libglu1-mesa:armhf.
Preparing to unpack .../126-libglu1-mesa_9.0.1-1_armhf.deb ...
Unpacking libglu1-mesa:armhf (9.0.1-1) ...
Selecting previously unselected package liblapack3:armhf.
Preparing to unpack .../127-liblapack3_3.9.0-1_armhf.deb ...
Unpacking liblapack3:armhf (3.9.0-1) ...
Selecting previously unselected package libmetis5:armhf.
Preparing to unpack .../128-libmetis5_5.1.0.dfsg-5_armhf.deb ...
Unpacking libmetis5:armhf (5.1.0.dfsg-5) ...
Selecting previously unselected package libilmbase24:armhf.
Preparing to unpack .../129-libilmbase24_2.3.0-6_armhf.deb ...
Unpacking libilmbase24:armhf (2.3.0-6) ...
Selecting previously unselected package libjxr0:armhf.
Preparing to unpack .../130-libjxr0_1.1-6_armhf.deb ...
Unpacking libjxr0:armhf (1.1-6) ...
Selecting previously unselected package libopenexr24:armhf.
Preparing to unpack .../131-libopenexr24_2.3.0-6_armhf.deb ...
Unpacking libopenexr24:armhf (2.3.0-6) ...
Selecting previously unselected package libraw19:armhf.
Preparing to unpack .../132-libraw19_0.19.5-1_armhf.deb ...
Unpacking libraw19:armhf (0.19.5-1) ...
Selecting previously unselected package libwebpmux3:armhf.
Preparing to unpack .../133-libwebpmux3_0.6.1-2_armhf.deb ...
Unpacking libwebpmux3:armhf (0.6.1-2) ...
Selecting previously unselected package libfreeimage3:armhf.
Preparing to unpack .../134-libfreeimage3_3.18.0+ds2-3_armhf.deb ...
Unpacking libfreeimage3:armhf (3.18.0+ds2-3) ...
Selecting previously unselected package libtbb2:armhf.
Preparing to unpack .../135-libtbb2_2020.1-2_armhf.deb ...
Unpacking libtbb2:armhf (2020.1-2) ...
Selecting previously unselected package libocct-foundation-7.3:armhf.
Preparing to unpack .../136-libocct-foundation-7.3_7.3.3+dfsg1-1+rpi1_armhf.deb ...
Unpacking libocct-foundation-7.3:armhf (7.3.3+dfsg1-1+rpi1) ...
Selecting previously unselected package libocct-modeling-data-7.3:armhf.
Preparing to unpack .../137-libocct-modeling-data-7.3_7.3.3+dfsg1-1+rpi1_armhf.deb ...
Unpacking libocct-modeling-data-7.3:armhf (7.3.3+dfsg1-1+rpi1) ...
Selecting previously unselected package libocct-modeling-algorithms-7.3:armhf.
Preparing to unpack .../138-libocct-modeling-algorithms-7.3_7.3.3+dfsg1-1+rpi1_armhf.deb ...
Unpacking libocct-modeling-algorithms-7.3:armhf (7.3.3+dfsg1-1+rpi1) ...
Selecting previously unselected package libxi6:armhf.
Preparing to unpack .../139-libxi6_2%3a1.7.9-1_armhf.deb ...
Unpacking libxi6:armhf (2:1.7.9-1) ...
Selecting previously unselected package x11-common.
Preparing to unpack .../140-x11-common_1%3a7.7+20_all.deb ...
Unpacking x11-common (1:7.7+20) ...
Selecting previously unselected package libice6:armhf.
Preparing to unpack .../141-libice6_2%3a1.0.9-2_armhf.deb ...
Unpacking libice6:armhf (2:1.0.9-2) ...
Selecting previously unselected package libsm6:armhf.
Preparing to unpack .../142-libsm6_2%3a1.2.3-1_armhf.deb ...
Unpacking libsm6:armhf (2:1.2.3-1) ...
Selecting previously unselected package libxt6:armhf.
Preparing to unpack .../143-libxt6_1%3a1.1.5-1+b3_armhf.deb ...
Unpacking libxt6:armhf (1:1.1.5-1+b3) ...
Selecting previously unselected package libxmu6:armhf.
Preparing to unpack .../144-libxmu6_2%3a1.1.2-2+b3_armhf.deb ...
Unpacking libxmu6:armhf (2:1.1.2-2+b3) ...
Selecting previously unselected package libocct-visualization-7.3:armhf.
Preparing to unpack .../145-libocct-visualization-7.3_7.3.3+dfsg1-1+rpi1_armhf.deb ...
Unpacking libocct-visualization-7.3:armhf (7.3.3+dfsg1-1+rpi1) ...
Selecting previously unselected package libocct-ocaf-7.3:armhf.
Preparing to unpack .../146-libocct-ocaf-7.3_7.3.3+dfsg1-1+rpi1_armhf.deb ...
Unpacking libocct-ocaf-7.3:armhf (7.3.3+dfsg1-1+rpi1) ...
Selecting previously unselected package libocct-data-exchange-7.3:armhf.
Preparing to unpack .../147-libocct-data-exchange-7.3_7.3.3+dfsg1-1+rpi1_armhf.deb ...
Unpacking libocct-data-exchange-7.3:armhf (7.3.3+dfsg1-1+rpi1) ...
Selecting previously unselected package libgmsh4:armhf.
Preparing to unpack .../148-libgmsh4_4.4.1+ds1-2_armhf.deb ...
Unpacking libgmsh4:armhf (4.4.1+ds1-2) ...
Selecting previously unselected package gmsh.
Preparing to unpack .../149-gmsh_4.4.1+ds1-2_armhf.deb ...
Unpacking gmsh (4.4.1+ds1-2) ...
Selecting previously unselected package hdf5-helpers.
Preparing to unpack .../150-hdf5-helpers_1.10.4+repack-11_armhf.deb ...
Unpacking hdf5-helpers (1.10.4+repack-11) ...
Selecting previously unselected package libnl-3-200:armhf.
Preparing to unpack .../151-libnl-3-200_3.4.0-1_armhf.deb ...
Unpacking libnl-3-200:armhf (3.4.0-1) ...
Selecting previously unselected package libnl-route-3-200:armhf.
Preparing to unpack .../152-libnl-route-3-200_3.4.0-1_armhf.deb ...
Unpacking libnl-route-3-200:armhf (3.4.0-1) ...
Selecting previously unselected package libibverbs1:armhf.
Preparing to unpack .../153-libibverbs1_28.0-1_armhf.deb ...
Unpacking libibverbs1:armhf (28.0-1) ...
Selecting previously unselected package ibverbs-providers:armhf.
Preparing to unpack .../154-ibverbs-providers_28.0-1_armhf.deb ...
Unpacking ibverbs-providers:armhf (28.0-1) ...
Selecting previously unselected package libaec0:armhf.
Preparing to unpack .../155-libaec0_1.0.4-1_armhf.deb ...
Unpacking libaec0:armhf (1.0.4-1) ...
Selecting previously unselected package libsz2:armhf.
Preparing to unpack .../156-libsz2_1.0.4-1_armhf.deb ...
Unpacking libsz2:armhf (1.0.4-1) ...
Selecting previously unselected package libaec-dev:armhf.
Preparing to unpack .../157-libaec-dev_1.0.4-1_armhf.deb ...
Unpacking libaec-dev:armhf (1.0.4-1) ...
Selecting previously unselected package libapache-pom-java.
Preparing to unpack .../158-libapache-pom-java_18-1_all.deb ...
Unpacking libapache-pom-java (18-1) ...
Selecting previously unselected package libarpack2:armhf.
Preparing to unpack .../159-libarpack2_3.7.0-3_armhf.deb ...
Unpacking libarpack2:armhf (3.7.0-3) ...
Selecting previously unselected package libsuperlu5:armhf.
Preparing to unpack .../160-libsuperlu5_5.2.1+dfsg1-4_armhf.deb ...
Unpacking libsuperlu5:armhf (5.2.1+dfsg1-4) ...
Selecting previously unselected package libarmadillo9.
Preparing to unpack .../161-libarmadillo9_1%3a9.800.4+dfsg-1_armhf.deb ...
Unpacking libarmadillo9 (1:9.800.4+dfsg-1) ...
Selecting previously unselected package libboost1.67-dev:armhf.
Preparing to unpack .../162-libboost1.67-dev_1.67.0-17_armhf.deb ...
Unpacking libboost1.67-dev:armhf (1.67.0-17) ...
Selecting previously unselected package libboost-python1.67.0.
Preparing to unpack .../163-libboost-python1.67.0_1.67.0-17_armhf.deb ...
Unpacking libboost-python1.67.0 (1.67.0-17) ...
Selecting previously unselected package libpython2.7:armhf.
Preparing to unpack .../164-libpython2.7_2.7.17-1+b1_armhf.deb ...
Unpacking libpython2.7:armhf (2.7.17-1+b1) ...
Selecting previously unselected package libexpat1-dev:armhf.
Preparing to unpack .../165-libexpat1-dev_2.2.9-1_armhf.deb ...
Unpacking libexpat1-dev:armhf (2.2.9-1) ...
Selecting previously unselected package libpython2.7-dev:armhf.
Preparing to unpack .../166-libpython2.7-dev_2.7.17-1+b1_armhf.deb ...
Unpacking libpython2.7-dev:armhf (2.7.17-1+b1) ...
Selecting previously unselected package libpython2-dev:armhf.
Preparing to unpack .../167-libpython2-dev_2.7.17-2_armhf.deb ...
Unpacking libpython2-dev:armhf (2.7.17-2) ...
Selecting previously unselected package libpython-dev:armhf.
Preparing to unpack .../168-libpython-dev_2.7.17-2_armhf.deb ...
Unpacking libpython-dev:armhf (2.7.17-2) ...
Selecting previously unselected package python2.7-dev.
Preparing to unpack .../169-python2.7-dev_2.7.17-1+b1_armhf.deb ...
Unpacking python2.7-dev (2.7.17-1+b1) ...
Selecting previously unselected package python2-dev.
Preparing to unpack .../170-python2-dev_2.7.17-2_armhf.deb ...
Unpacking python2-dev (2.7.17-2) ...
Selecting previously unselected package python-dev.
Preparing to unpack .../171-python-dev_2.7.17-2_armhf.deb ...
Unpacking python-dev (2.7.17-2) ...
Selecting previously unselected package libpython3.7:armhf.
Preparing to unpack .../172-libpython3.7_3.7.6-1+b1_armhf.deb ...
Unpacking libpython3.7:armhf (3.7.6-1+b1) ...
Selecting previously unselected package libpython3.7-dev:armhf.
Preparing to unpack .../173-libpython3.7-dev_3.7.6-1+b1_armhf.deb ...
Unpacking libpython3.7-dev:armhf (3.7.6-1+b1) ...
Selecting previously unselected package libpython3-dev:armhf.
Preparing to unpack .../174-libpython3-dev_3.7.5-3_armhf.deb ...
Unpacking libpython3-dev:armhf (3.7.5-3) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../175-zlib1g-dev_1%3a1.2.11.dfsg-1.2_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-1.2) ...
Selecting previously unselected package python3.7-dev.
Preparing to unpack .../176-python3.7-dev_3.7.6-1+b1_armhf.deb ...
Unpacking python3.7-dev (3.7.6-1+b1) ...
Selecting previously unselected package python3-dev.
Preparing to unpack .../177-python3-dev_3.7.5-3_armhf.deb ...
Unpacking python3-dev (3.7.5-3) ...
Selecting previously unselected package libboost-python1.67-dev.
Preparing to unpack .../178-libboost-python1.67-dev_1.67.0-17_armhf.deb ...
Unpacking libboost-python1.67-dev (1.67.0-17) ...
Selecting previously unselected package libboost-python-dev.
Preparing to unpack .../179-libboost-python-dev_1.67.0.2+b11_armhf.deb ...
Unpacking libboost-python-dev (1.67.0.2+b11) ...
Selecting previously unselected package libboost-system1.67.0:armhf.
Preparing to unpack .../180-libboost-system1.67.0_1.67.0-17_armhf.deb ...
Unpacking libboost-system1.67.0:armhf (1.67.0-17) ...
Selecting previously unselected package libboost-random1.67.0:armhf.
Preparing to unpack .../181-libboost-random1.67.0_1.67.0-17_armhf.deb ...
Unpacking libboost-random1.67.0:armhf (1.67.0-17) ...
Selecting previously unselected package libboost-random1.67-dev:armhf.
Preparing to unpack .../182-libboost-random1.67-dev_1.67.0-17_armhf.deb ...
Unpacking libboost-random1.67-dev:armhf (1.67.0-17) ...
Selecting previously unselected package libboost-random-dev:armhf.
Preparing to unpack .../183-libboost-random-dev_1.67.0.2+b11_armhf.deb ...
Unpacking libboost-random-dev:armhf (1.67.0.2+b11) ...
Selecting previously unselected package libbrotli1:armhf.
Preparing to unpack .../184-libbrotli1_1.0.7-6_armhf.deb ...
Unpacking libbrotli1:armhf (1.0.7-6) ...
Selecting previously unselected package libpixman-1-0:armhf.
Preparing to unpack .../185-libpixman-1-0_0.36.0-1_armhf.deb ...
Unpacking libpixman-1-0:armhf (0.36.0-1) ...
Selecting previously unselected package libxcb-render0:armhf.
Preparing to unpack .../186-libxcb-render0_1.13.1-5_armhf.deb ...
Unpacking libxcb-render0:armhf (1.13.1-5) ...
Selecting previously unselected package libxcb-shm0:armhf.
Preparing to unpack .../187-libxcb-shm0_1.13.1-5_armhf.deb ...
Unpacking libxcb-shm0:armhf (1.13.1-5) ...
Selecting previously unselected package libcairo2:armhf.
Preparing to unpack .../188-libcairo2_1.16.0-4_armhf.deb ...
Unpacking libcairo2:armhf (1.16.0-4) ...
Selecting previously unselected package libnghttp2-14:armhf.
Preparing to unpack .../189-libnghttp2-14_1.40.0-1+b2_armhf.deb ...
Unpacking libnghttp2-14:armhf (1.40.0-1+b2) ...
Selecting previously unselected package libpsl5:armhf.
Preparing to unpack .../190-libpsl5_0.20.2-2_armhf.deb ...
Unpacking libpsl5:armhf (0.20.2-2) ...
Selecting previously unselected package librtmp1:armhf.
Preparing to unpack .../191-librtmp1_2.4+20151223.gitfa8646d.1-2+b1_armhf.deb ...
Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Selecting previously unselected package libssh2-1:armhf.
Preparing to unpack .../192-libssh2-1_1.8.0-2.1_armhf.deb ...
Unpacking libssh2-1:armhf (1.8.0-2.1) ...
Selecting previously unselected package libcurl3-gnutls:armhf.
Preparing to unpack .../193-libcurl3-gnutls_7.68.0-1_armhf.deb ...
Unpacking libcurl3-gnutls:armhf (7.68.0-1) ...
Selecting previously unselected package libcfitsio8:armhf.
Preparing to unpack .../194-libcfitsio8_3.470-3_armhf.deb ...
Unpacking libcfitsio8:armhf (3.470-3) ...
Selecting previously unselected package libcharls2:armhf.
Preparing to unpack .../195-libcharls2_2.0.0+dfsg-1_armhf.deb ...
Unpacking libcharls2:armhf (2.0.0+dfsg-1) ...
Selecting previously unselected package libcommons-parent-java.
Preparing to unpack .../196-libcommons-parent-java_43-1_all.deb ...
Unpacking libcommons-parent-java (43-1) ...
Selecting previously unselected package libcommons-logging-java.
Preparing to unpack .../197-libcommons-logging-java_1.2-2_all.deb ...
Unpacking libcommons-logging-java (1.2-2) ...
Selecting previously unselected package libcurl4-gnutls-dev:armhf.
Preparing to unpack .../198-libcurl4-gnutls-dev_7.68.0-1_armhf.deb ...
Unpacking libcurl4-gnutls-dev:armhf (7.68.0-1) ...
Selecting previously unselected package libdap25:armhf.
Preparing to unpack .../199-libdap25_3.20.5-1_armhf.deb ...
Unpacking libdap25:armhf (3.20.5-1) ...
Selecting previously unselected package libdapclient6v5:armhf.
Preparing to unpack .../200-libdapclient6v5_3.20.5-1_armhf.deb ...
Unpacking libdapclient6v5:armhf (3.20.5-1) ...
Selecting previously unselected package libpopt0:armhf.
Preparing to unpack .../201-libpopt0_1.16-14_armhf.deb ...
Unpacking libpopt0:armhf (1.16-14) ...
Selecting previously unselected package libepsilon1:armhf.
Preparing to unpack .../202-libepsilon1_0.9.2+dfsg-4_armhf.deb ...
Unpacking libepsilon1:armhf (0.9.2+dfsg-4) ...
Selecting previously unselected package libevent-2.1-7:armhf.
Preparing to unpack .../203-libevent-2.1-7_2.1.11-stable-1_armhf.deb ...
Unpacking libevent-2.1-7:armhf (2.1.11-stable-1) ...
Selecting previously unselected package libevent-core-2.1-7:armhf.
Preparing to unpack .../204-libevent-core-2.1-7_2.1.11-stable-1_armhf.deb ...
Unpacking libevent-core-2.1-7:armhf (2.1.11-stable-1) ...
Selecting previously unselected package libevent-extra-2.1-7:armhf.
Preparing to unpack .../205-libevent-extra-2.1-7_2.1.11-stable-1_armhf.deb ...
Unpacking libevent-extra-2.1-7:armhf (2.1.11-stable-1) ...
Selecting previously unselected package libevent-pthreads-2.1-7:armhf.
Preparing to unpack .../206-libevent-pthreads-2.1-7_2.1.11-stable-1_armhf.deb ...
Unpacking libevent-pthreads-2.1-7:armhf (2.1.11-stable-1) ...
Selecting previously unselected package libevent-openssl-2.1-7:armhf.
Preparing to unpack .../207-libevent-openssl-2.1-7_2.1.11-stable-1_armhf.deb ...
Unpacking libevent-openssl-2.1-7:armhf (2.1.11-stable-1) ...
Selecting previously unselected package libevent-dev.
Preparing to unpack .../208-libevent-dev_2.1.11-stable-1_armhf.deb ...
Unpacking libevent-dev (2.1.11-stable-1) ...
Selecting previously unselected package libfontbox-java.
Preparing to unpack .../209-libfontbox-java_1%3a1.8.16-2_all.deb ...
Unpacking libfontbox-java (1:1.8.16-2) ...
Selecting previously unselected package libfreexl1:armhf.
Preparing to unpack .../210-libfreexl1_1.0.5-3_armhf.deb ...
Unpacking libfreexl1:armhf (1.0.5-3) ...
Selecting previously unselected package libfyba0:armhf.
Preparing to unpack .../211-libfyba0_4.1.1-6_armhf.deb ...
Unpacking libfyba0:armhf (4.1.1-6) ...
Selecting previously unselected package libgeos-3.8.0:armhf.
Preparing to unpack .../212-libgeos-3.8.0_3.8.0-1_armhf.deb ...
Unpacking libgeos-3.8.0:armhf (3.8.0-1) ...
Selecting previously unselected package libgeos-c1v5:armhf.
Preparing to unpack .../213-libgeos-c1v5_3.8.0-1_armhf.deb ...
Unpacking libgeos-c1v5:armhf (3.8.0-1) ...
Selecting previously unselected package proj-data.
Preparing to unpack .../214-proj-data_6.3.1-1_all.deb ...
Unpacking proj-data (6.3.1-1) ...
Selecting previously unselected package libproj15:armhf.
Preparing to unpack .../215-libproj15_6.3.1-1_armhf.deb ...
Unpacking libproj15:armhf (6.3.1-1) ...
Selecting previously unselected package libgeotiff5:armhf.
Preparing to unpack .../216-libgeotiff5_1.5.1-2_armhf.deb ...
Unpacking libgeotiff5:armhf (1.5.1-2) ...
Selecting previously unselected package libgif7:armhf.
Preparing to unpack .../217-libgif7_5.1.9-1_armhf.deb ...
Unpacking libgif7:armhf (5.1.9-1) ...
Selecting previously unselected package libhdf4-0-alt.
Preparing to unpack .../218-libhdf4-0-alt_4.2.14-1+b6_armhf.deb ...
Unpacking libhdf4-0-alt (4.2.14-1+b6) ...
Selecting previously unselected package libhdf5-103:armhf.
Preparing to unpack .../219-libhdf5-103_1.10.4+repack-11_armhf.deb ...
Unpacking libhdf5-103:armhf (1.10.4+repack-11) ...
Selecting previously unselected package libjson-c4:armhf.
Preparing to unpack .../220-libjson-c4_0.13.1+dfsg-7_armhf.deb ...
Unpacking libjson-c4:armhf (0.13.1+dfsg-7) ...
Selecting previously unselected package libminizip1:armhf.
Preparing to unpack .../221-libminizip1_1.1-8+b1_armhf.deb ...
Unpacking libminizip1:armhf (1.1-8+b1) ...
Selecting previously unselected package liburiparser1:armhf.
Preparing to unpack .../222-liburiparser1_0.9.3-2_armhf.deb ...
Unpacking liburiparser1:armhf (0.9.3-2) ...
Selecting previously unselected package libkmlbase1:armhf.
Preparing to unpack .../223-libkmlbase1_1.3.0-8_armhf.deb ...
Unpacking libkmlbase1:armhf (1.3.0-8) ...
Selecting previously unselected package libkmldom1:armhf.
Preparing to unpack .../224-libkmldom1_1.3.0-8_armhf.deb ...
Unpacking libkmldom1:armhf (1.3.0-8) ...
Selecting previously unselected package libkmlengine1:armhf.
Preparing to unpack .../225-libkmlengine1_1.3.0-8_armhf.deb ...
Unpacking libkmlengine1:armhf (1.3.0-8) ...
Selecting previously unselected package mysql-common.
Preparing to unpack .../226-mysql-common_5.8+1.0.5_all.deb ...
Unpacking mysql-common (5.8+1.0.5) ...
Selecting previously unselected package mariadb-common.
Preparing to unpack .../227-mariadb-common_1%3a10.3.22-1_all.deb ...
Unpacking mariadb-common (1:10.3.22-1) ...
Selecting previously unselected package libmariadb3:armhf.
Preparing to unpack .../228-libmariadb3_1%3a10.3.22-1_armhf.deb ...
Unpacking libmariadb3:armhf (1:10.3.22-1) ...
Selecting previously unselected package libnetcdf15:armhf.
Preparing to unpack .../229-libnetcdf15_1%3a4.7.3-1_armhf.deb ...
Unpacking libnetcdf15:armhf (1:4.7.3-1) ...
Selecting previously unselected package libltdl7:armhf.
Preparing to unpack .../230-libltdl7_2.4.6-13_armhf.deb ...
Unpacking libltdl7:armhf (2.4.6-13) ...
Selecting previously unselected package libodbc1:armhf.
Preparing to unpack .../231-libodbc1_2.3.6-0.1+b1_armhf.deb ...
Unpacking libodbc1:armhf (2.3.6-0.1+b1) ...
Selecting previously unselected package libogdi4.1.
Preparing to unpack .../232-libogdi4.1_4.1.0+ds-1_armhf.deb ...
Unpacking libogdi4.1 (4.1.0+ds-1) ...
Selecting previously unselected package libnspr4:armhf.
Preparing to unpack .../233-libnspr4_2%3a4.24-1_armhf.deb ...
Unpacking libnspr4:armhf (2:4.24-1) ...
Selecting previously unselected package libnss3:armhf.
Preparing to unpack .../234-libnss3_2%3a3.49.1-1_armhf.deb ...
Unpacking libnss3:armhf (2:3.49.1-1) ...
Selecting previously unselected package libpoppler82:armhf.
Preparing to unpack .../235-libpoppler82_0.71.0-6_armhf.deb ...
Unpacking libpoppler82:armhf (0.71.0-6) ...
Selecting previously unselected package libpq5:armhf.
Preparing to unpack .../236-libpq5_12.2-1_armhf.deb ...
Unpacking libpq5:armhf (12.2-1) ...
Selecting previously unselected package libqhull7:armhf.
Preparing to unpack .../237-libqhull7_2015.2-4_armhf.deb ...
Unpacking libqhull7:armhf (2015.2-4) ...
Selecting previously unselected package libspatialite7:armhf.
Preparing to unpack .../238-libspatialite7_4.3.0a-6+b2_armhf.deb ...
Unpacking libspatialite7:armhf (4.3.0a-6+b2) ...
Selecting previously unselected package libxerces-c3.2:armhf.
Preparing to unpack .../239-libxerces-c3.2_3.2.2+debian-1+b1_armhf.deb ...
Unpacking libxerces-c3.2:armhf (3.2.2+debian-1+b1) ...
Selecting previously unselected package odbcinst.
Preparing to unpack .../240-odbcinst_2.3.6-0.1+b1_armhf.deb ...
Unpacking odbcinst (2.3.6-0.1+b1) ...
Selecting previously unselected package odbcinst1debian2:armhf.
Preparing to unpack .../241-odbcinst1debian2_2.3.6-0.1+b1_armhf.deb ...
Unpacking odbcinst1debian2:armhf (2.3.6-0.1+b1) ...
Selecting previously unselected package libgdal26.
Preparing to unpack .../242-libgdal26_3.0.4+dfsg-1_armhf.deb ...
Unpacking libgdal26 (3.0.4+dfsg-1) ...
Selecting previously unselected package libgraphite2-3:armhf.
Preparing to unpack .../243-libgraphite2-3_1.3.13-11_armhf.deb ...
Unpacking libgraphite2-3:armhf (1.3.13-11) ...
Selecting previously unselected package libharfbuzz0b:armhf.
Preparing to unpack .../244-libharfbuzz0b_2.6.4-1+rpi1_armhf.deb ...
Unpacking libharfbuzz0b:armhf (2.6.4-1+rpi1) ...
Selecting previously unselected package libharfbuzz-icu0:armhf.
Preparing to unpack .../245-libharfbuzz-icu0_2.6.4-1+rpi1_armhf.deb ...
Unpacking libharfbuzz-icu0:armhf (2.6.4-1+rpi1) ...
Selecting previously unselected package libhdf5-cpp-103:armhf.
Preparing to unpack .../246-libhdf5-cpp-103_1.10.4+repack-11_armhf.deb ...
Unpacking libhdf5-cpp-103:armhf (1.10.4+repack-11) ...
Selecting previously unselected package libjpeg62-turbo-dev:armhf.
Preparing to unpack .../247-libjpeg62-turbo-dev_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package libjpeg-dev.
Preparing to unpack .../248-libjpeg-dev_1%3a1.5.2-2_all.deb ...
Unpacking libjpeg-dev (1:1.5.2-2) ...
Selecting previously unselected package libhdf5-dev.
Preparing to unpack .../249-libhdf5-dev_1.10.4+repack-11_armhf.deb ...
Unpacking libhdf5-dev (1.10.4+repack-11) ...
Selecting previously unselected package libhwloc15:armhf.
Preparing to unpack .../250-libhwloc15_2.1.0+dfsg-3+rpi1_armhf.deb ...
Unpacking libhwloc15:armhf (2.1.0+dfsg-3+rpi1) ...
Selecting previously unselected package libpciaccess0:armhf.
Preparing to unpack .../251-libpciaccess0_0.14-1_armhf.deb ...
Unpacking libpciaccess0:armhf (0.14-1) ...
Selecting previously unselected package libxnvctrl0:armhf.
Preparing to unpack .../252-libxnvctrl0_440.59-1_armhf.deb ...
Unpacking libxnvctrl0:armhf (440.59-1) ...
Selecting previously unselected package ocl-icd-libopencl1:armhf.
Preparing to unpack .../253-ocl-icd-libopencl1_2.2.12-3_armhf.deb ...
Unpacking ocl-icd-libopencl1:armhf (2.2.12-3) ...
Selecting previously unselected package libhwloc-plugins:armhf.
Preparing to unpack .../254-libhwloc-plugins_2.1.0+dfsg-3+rpi1_armhf.deb ...
Unpacking libhwloc-plugins:armhf (2.1.0+dfsg-3+rpi1) ...
Selecting previously unselected package libpmix2:armhf.
Preparing to unpack .../255-libpmix2_3.1.4-1+b1_armhf.deb ...
Unpacking libpmix2:armhf (3.1.4-1+b1) ...
Selecting previously unselected package libopenmpi3:armhf.
Preparing to unpack .../256-libopenmpi3_4.0.2-5+rpi1_armhf.deb ...
Unpacking libopenmpi3:armhf (4.0.2-5+rpi1) ...
Selecting previously unselected package libhdf5-openmpi-103:armhf.
Preparing to unpack .../257-libhdf5-openmpi-103_1.10.4+repack-11_armhf.deb ...
Unpacking libhdf5-openmpi-103:armhf (1.10.4+repack-11) ...
Selecting previously unselected package libltdl-dev:armhf.
Preparing to unpack .../258-libltdl-dev_2.4.6-13_armhf.deb ...
Unpacking libltdl-dev:armhf (2.4.6-13) ...
Selecting previously unselected package libhwloc-dev:armhf.
Preparing to unpack .../259-libhwloc-dev_2.1.0+dfsg-3+rpi1_armhf.deb ...
Unpacking libhwloc-dev:armhf (2.1.0+dfsg-3+rpi1) ...
Selecting previously unselected package libnl-3-dev:armhf.
Preparing to unpack .../260-libnl-3-dev_3.4.0-1_armhf.deb ...
Unpacking libnl-3-dev:armhf (3.4.0-1) ...
Selecting previously unselected package libnl-route-3-dev:armhf.
Preparing to unpack .../261-libnl-route-3-dev_3.4.0-1_armhf.deb ...
Unpacking libnl-route-3-dev:armhf (3.4.0-1) ...
Selecting previously unselected package libibverbs-dev:armhf.
Preparing to unpack .../262-libibverbs-dev_28.0-1_armhf.deb ...
Unpacking libibverbs-dev:armhf (28.0-1) ...
Selecting previously unselected package libjs-jquery.
Preparing to unpack .../263-libjs-jquery_3.3.1~dfsg-3_all.deb ...
Unpacking libjs-jquery (3.3.1~dfsg-3) ...
Selecting previously unselected package libjs-jquery-ui.
Preparing to unpack .../264-libjs-jquery-ui_1.12.1+dfsg-5_all.deb ...
Unpacking libjs-jquery-ui (1.12.1+dfsg-5) ...
Selecting previously unselected package libjs-mathjax.
Preparing to unpack .../265-libjs-mathjax_2.7.4+dfsg-1_all.deb ...
Unpacking libjs-mathjax (2.7.4+dfsg-1) ...
Selecting previously unselected package libjs-underscore.
Preparing to unpack .../266-libjs-underscore_1.9.1~dfsg-1_all.deb ...
Unpacking libjs-underscore (1.9.1~dfsg-1) ...
Selecting previously unselected package libjs-sphinxdoc.
Preparing to unpack .../267-libjs-sphinxdoc_1.8.5-5_all.deb ...
Unpacking libjs-sphinxdoc (1.8.5-5) ...
Selecting previously unselected package libkpathsea6:armhf.
Preparing to unpack .../268-libkpathsea6_2019.20190605.51237-3_armhf.deb ...
Unpacking libkpathsea6:armhf (2019.20190605.51237-3) ...
Selecting previously unselected package liblbfgsb0:armhf.
Preparing to unpack .../269-liblbfgsb0_3.0+dfsg.3-7_armhf.deb ...
Unpacking liblbfgsb0:armhf (3.0+dfsg.3-7) ...
Selecting previously unselected package libnetcdf-c++4.
Preparing to unpack .../270-libnetcdf-c++4_4.2-11+b1_armhf.deb ...
Unpacking libnetcdf-c++4 (4.2-11+b1) ...
Selecting previously unselected package libnetcdf-c++4-1.
Preparing to unpack .../271-libnetcdf-c++4-1_4.3.1-2_armhf.deb ...
Unpacking libnetcdf-c++4-1 (4.3.1-2) ...
Selecting previously unselected package libnetcdf-dev.
Preparing to unpack .../272-libnetcdf-dev_1%3a4.7.3-1_armhf.deb ...
Unpacking libnetcdf-dev (1:4.7.3-1) ...
Selecting previously unselected package libnetcdf-c++4-dev.
Preparing to unpack .../273-libnetcdf-c++4-dev_4.3.1-2_armhf.deb ...
Unpacking libnetcdf-c++4-dev (4.3.1-2) ...
Selecting previously unselected package libnetcdf-cxx-legacy-dev.
Preparing to unpack .../274-libnetcdf-cxx-legacy-dev_4.2-11+b1_armhf.deb ...
Unpacking libnetcdf-cxx-legacy-dev (4.2-11+b1) ...
Selecting previously unselected package openmpi-common.
Preparing to unpack .../275-openmpi-common_4.0.2-5+rpi1_all.deb ...
Unpacking openmpi-common (4.0.2-5+rpi1) ...
Selecting previously unselected package openmpi-bin.
Preparing to unpack .../276-openmpi-bin_4.0.2-5+rpi1_armhf.deb ...
Unpacking openmpi-bin (4.0.2-5+rpi1) ...
Selecting previously unselected package libopenmpi-dev:armhf.
Preparing to unpack .../277-libopenmpi-dev_4.0.2-5+rpi1_armhf.deb ...
Unpacking libopenmpi-dev:armhf (4.0.2-5+rpi1) ...
Selecting previously unselected package libpaper-utils.
Preparing to unpack .../278-libpaper-utils_1.1.28_armhf.deb ...
Unpacking libpaper-utils (1.1.28) ...
Selecting previously unselected package libpdfbox-java.
Preparing to unpack .../279-libpdfbox-java_1%3a1.8.16-2_all.deb ...
Unpacking libpdfbox-java (1:1.8.16-2) ...
Selecting previously unselected package libptexenc1:armhf.
Preparing to unpack .../280-libptexenc1_2019.20190605.51237-3_armhf.deb ...
Unpacking libptexenc1:armhf (2019.20190605.51237-3) ...
Selecting previously unselected package libpython3.8-stdlib:armhf.
Preparing to unpack .../281-libpython3.8-stdlib_3.8.2-1_armhf.deb ...
Unpacking libpython3.8-stdlib:armhf (3.8.2-1) ...
Selecting previously unselected package libsiloh5-0:armhf.
Preparing to unpack .../282-libsiloh5-0_4.10.2.real-7_armhf.deb ...
Unpacking libsiloh5-0:armhf (4.10.2.real-7) ...
Selecting previously unselected package libsilo-dev:armhf.
Preparing to unpack .../283-libsilo-dev_4.10.2.real-7_armhf.deb ...
Unpacking libsilo-dev:armhf (4.10.2.real-7) ...
Selecting previously unselected package libsynctex2:armhf.
Preparing to unpack .../284-libsynctex2_2019.20190605.51237-3_armhf.deb ...
Unpacking libsynctex2:armhf (2019.20190605.51237-3) ...
Selecting previously unselected package libteckit0:armhf.
Preparing to unpack .../285-libteckit0_2.5.8+ds2-5_armhf.deb ...
Unpacking libteckit0:armhf (2.5.8+ds2-5) ...
Selecting previously unselected package libtexlua53:armhf.
Preparing to unpack .../286-libtexlua53_2019.20190605.51237-3_armhf.deb ...
Unpacking libtexlua53:armhf (2019.20190605.51237-3) ...
Selecting previously unselected package libtexluajit2:armhf.
Preparing to unpack .../287-libtexluajit2_2019.20190605.51237-3_armhf.deb ...
Unpacking libtexluajit2:armhf (2019.20190605.51237-3) ...
Selecting previously unselected package libxpm4:armhf.
Preparing to unpack .../288-libxpm4_1%3a3.5.12-1_armhf.deb ...
Unpacking libxpm4:armhf (1:3.5.12-1) ...
Selecting previously unselected package libxaw7:armhf.
Preparing to unpack .../289-libxaw7_2%3a1.0.13-1+b2_armhf.deb ...
Unpacking libxaw7:armhf (2:1.0.13-1+b2) ...
Selecting previously unselected package libzzip-0-13:armhf.
Preparing to unpack .../290-libzzip-0-13_0.13.62-3.2_armhf.deb ...
Unpacking libzzip-0-13:armhf (0.13.62-3.2) ...
Selecting previously unselected package lsb-release.
Preparing to unpack .../291-lsb-release_11.1.0+rpi1_all.deb ...
Unpacking lsb-release (11.1.0+rpi1) ...
Selecting previously unselected package mpi-default-dev.
Preparing to unpack .../292-mpi-default-dev_1.13_armhf.deb ...
Unpacking mpi-default-dev (1.13) ...
Selecting previously unselected package preview-latex-style.
Preparing to unpack .../293-preview-latex-style_11.91-2_all.deb ...
Unpacking preview-latex-style (11.91-2) ...
Selecting previously unselected package python-babel-localedata.
Preparing to unpack .../294-python-babel-localedata_2.8.0+dfsg.1-2_all.deb ...
Unpacking python-babel-localedata (2.8.0+dfsg.1-2) ...
Selecting previously unselected package python-matplotlib-data.
Preparing to unpack .../295-python-matplotlib-data_3.1.2-2_all.deb ...
Unpacking python-matplotlib-data (3.1.2-2) ...
Selecting previously unselected package python3-attr.
Preparing to unpack .../296-python3-attr_19.3.0-1_all.deb ...
Unpacking python3-attr (19.3.0-1) ...
Selecting previously unselected package python3-pkg-resources.
Preparing to unpack .../297-python3-pkg-resources_44.0.0-1_all.deb ...
Unpacking python3-pkg-resources (44.0.0-1) ...
Selecting previously unselected package python3-tz.
Preparing to unpack .../298-python3-tz_2019.3-1_all.deb ...
Unpacking python3-tz (2019.3-1) ...
Selecting previously unselected package python3-babel.
Preparing to unpack .../299-python3-babel_2.8.0+dfsg.1-2_all.deb ...
Unpacking python3-babel (2.8.0+dfsg.1-2) ...
Selecting previously unselected package python3-certifi.
Preparing to unpack .../300-python3-certifi_2019.11.28-1_all.deb ...
Unpacking python3-certifi (2019.11.28-1) ...
Selecting previously unselected package python3-chardet.
Preparing to unpack .../301-python3-chardet_3.0.4-4_all.deb ...
Unpacking python3-chardet (3.0.4-4) ...
Selecting previously unselected package python3-six.
Preparing to unpack .../302-python3-six_1.14.0-2_all.deb ...
Unpacking python3-six (1.14.0-2) ...
Selecting previously unselected package python3-cycler.
Preparing to unpack .../303-python3-cycler_0.10.0-3_all.deb ...
Unpacking python3-cycler (0.10.0-3) ...
Selecting previously unselected package python3-dateutil.
Preparing to unpack .../304-python3-dateutil_2.7.3-3_all.deb ...
Unpacking python3-dateutil (2.7.3-3) ...
Selecting previously unselected package python3-decorator.
Preparing to unpack .../305-python3-decorator_4.3.0-1.1_all.deb ...
Unpacking python3-decorator (4.3.0-1.1) ...
Selecting previously unselected package python3-roman.
Preparing to unpack .../306-python3-roman_2.0.0-3_all.deb ...
Unpacking python3-roman (2.0.0-3) ...
Selecting previously unselected package python3-docutils.
Preparing to unpack .../307-python3-docutils_0.16+dfsg-1_all.deb ...
Unpacking python3-docutils (0.16+dfsg-1) ...
Selecting previously unselected package python3.8.
Preparing to unpack .../308-python3.8_3.8.2-1_armhf.deb ...
Unpacking python3.8 (3.8.2-1) ...
Selecting previously unselected package python3-numpy.
Preparing to unpack .../309-python3-numpy_1%3a1.17.4-5+b1_armhf.deb ...
Unpacking python3-numpy (1:1.17.4-5+b1) ...
Selecting previously unselected package python3-gdal.
Preparing to unpack .../310-python3-gdal_3.0.4+dfsg-1_armhf.deb ...
Unpacking python3-gdal (3.0.4+dfsg-1) ...
Selecting previously unselected package python3-idna.
Preparing to unpack .../311-python3-idna_2.6-2_all.deb ...
Unpacking python3-idna (2.6-2) ...
Selecting previously unselected package python3-imagesize.
Preparing to unpack .../312-python3-imagesize_1.2.0-1_all.deb ...
Unpacking python3-imagesize (1.2.0-1) ...
Selecting previously unselected package python3-markupsafe.
Preparing to unpack .../313-python3-markupsafe_1.1.0-1+b1_armhf.deb ...
Unpacking python3-markupsafe (1.1.0-1+b1) ...
Selecting previously unselected package python3-jinja2.
Preparing to unpack .../314-python3-jinja2_2.10.1-1_all.deb ...
Unpacking python3-jinja2 (2.10.1-1) ...
Selecting previously unselected package python3-kiwisolver.
Preparing to unpack .../315-python3-kiwisolver_1.0.1-3_armhf.deb ...
Unpacking python3-kiwisolver (1.0.1-3) ...
Selecting previously unselected package python3-pyparsing.
Preparing to unpack .../316-python3-pyparsing_2.4.6-1_all.deb ...
Unpacking python3-pyparsing (2.4.6-1) ...
Selecting previously unselected package python3-matplotlib.
Preparing to unpack .../317-python3-matplotlib_3.1.2-2_armhf.deb ...
Unpacking python3-matplotlib (3.1.2-2) ...
Selecting previously unselected package python3-mpmath.
Preparing to unpack .../318-python3-mpmath_1.1.0-1_all.deb ...
Unpacking python3-mpmath (1.1.0-1) ...
Selecting previously unselected package python3-packaging.
Preparing to unpack .../319-python3-packaging_19.1-2_all.deb ...
Unpacking python3-packaging (19.1-2) ...
Selecting previously unselected package python3-pygments.
Preparing to unpack .../320-python3-pygments_2.3.1+dfsg-1_all.deb ...
Unpacking python3-pygments (2.3.1+dfsg-1) ...
Selecting previously unselected package python3-pyproj.
Preparing to unpack .../321-python3-pyproj_2.5.0+ds-1_armhf.deb ...
Unpacking python3-pyproj (2.5.0+ds-1) ...
Selecting previously unselected package python3-urllib3.
Preparing to unpack .../322-python3-urllib3_1.25.8-1_all.deb ...
Unpacking python3-urllib3 (1.25.8-1) ...
Selecting previously unselected package python3-requests.
Preparing to unpack .../323-python3-requests_2.22.0-2_all.deb ...
Unpacking python3-requests (2.22.0-2) ...
Selecting previously unselected package python3-scipy.
Preparing to unpack .../324-python3-scipy_1.3.3-3+b1_armhf.deb ...
Unpacking python3-scipy (1.3.3-3+b1) ...
Selecting previously unselected package sphinx-common.
Preparing to unpack .../325-sphinx-common_1.8.5-5_all.deb ...
Unpacking sphinx-common (1.8.5-5) ...
Selecting previously unselected package python3-alabaster.
Preparing to unpack .../326-python3-alabaster_0.7.8-1_all.deb ...
Unpacking python3-alabaster (0.7.8-1) ...
Selecting previously unselected package python3-sphinx.
Preparing to unpack .../327-python3-sphinx_1.8.5-5_all.deb ...
Unpacking python3-sphinx (1.8.5-5) ...
Selecting previously unselected package python3-sympy.
Preparing to unpack .../328-python3-sympy_1.4-1_all.deb ...
Unpacking python3-sympy (1.4-1) ...
Selecting previously unselected package scons.
Preparing to unpack .../329-scons_3.1.2-2_all.deb ...
Unpacking scons (3.1.2-2) ...
Selecting previously unselected package t1utils.
Preparing to unpack .../330-t1utils_1.41-3_armhf.deb ...
Unpacking t1utils (1.41-3) ...
Selecting previously unselected package texlive-binaries.
Preparing to unpack .../331-texlive-binaries_2019.20190605.51237-3_armhf.deb ...
Unpacking texlive-binaries (2019.20190605.51237-3) ...
Selecting previously unselected package xdg-utils.
Preparing to unpack .../332-xdg-utils_1.1.3-1_all.deb ...
Unpacking xdg-utils (1.1.3-1) ...
Selecting previously unselected package texlive-base.
Preparing to unpack .../333-texlive-base_2019.20200218-1_all.deb ...
Unpacking texlive-base (2019.20200218-1) ...
Selecting previously unselected package texlive-fonts-recommended.
Preparing to unpack .../334-texlive-fonts-recommended_2019.20200218-1_all.deb ...
Unpacking texlive-fonts-recommended (2019.20200218-1) ...
Selecting previously unselected package texlive-latex-base.
Preparing to unpack .../335-texlive-latex-base_2019.20200218-1_all.deb ...
Unpacking texlive-latex-base (2019.20200218-1) ...
Selecting previously unselected package texlive-latex-recommended.
Preparing to unpack .../336-texlive-latex-recommended_2019.20200218-1_all.deb ...
Unpacking texlive-latex-recommended (2019.20200218-1) ...
Selecting previously unselected package texlive.
Preparing to unpack .../337-texlive_2019.20200218-1_all.deb ...
Unpacking texlive (2019.20200218-1) ...
Selecting previously unselected package texlive-pictures.
Preparing to unpack .../338-texlive-pictures_2019.20200218-1_all.deb ...
Unpacking texlive-pictures (2019.20200218-1) ...
Selecting previously unselected package texlive-latex-extra.
Preparing to unpack .../339-texlive-latex-extra_2019.202000218-1_all.deb ...
Unpacking texlive-latex-extra (2019.202000218-1) ...
Selecting previously unselected package zip.
Preparing to unpack .../340-zip_3.0-11_armhf.deb ...
Unpacking zip (3.0-11) ...
Selecting previously unselected package sbuild-build-depends-python-escript-dummy.
Preparing to unpack .../341-sbuild-build-depends-python-escript-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-python-escript-dummy (0.invalid.0) ...
Setting up libboost1.67-dev:armhf (1.67.0-17) ...
Setting up libpipeline1:armhf (1.5.2-2) ...
Setting up libgraphite2-3:armhf (1.3.13-11) ...
Setting up liblcms2-2:armhf (2.9-3) ...
Setting up libpixman-1-0:armhf (0.36.0-1) ...
Setting up libxapian30:armhf (1.4.14-2) ...
Setting up libx11-xcb1:armhf (2:1.6.8-1) ...
Setting up libpciaccess0:armhf (0.14-1) ...
Setting up mysql-common (5.8+1.0.5) ...
update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up libkeyutils1:armhf (1.6.1-2) ...
Setting up libpsl5:armhf (0.20.2-2) ...
Setting up ttf-bitstream-vera (1.10-8) ...
Setting up libpython3.8-minimal:armhf (3.8.2-1) ...
Setting up fonts-mathjax (2.7.4+dfsg-1) ...
Setting up mime-support (3.64) ...
Setting up proj-data (6.3.1-1) ...
Setting up hdf5-helpers (1.10.4+repack-11) ...
Setting up libjs-mathjax (2.7.4+dfsg-1) ...
Setting up libgeos-3.8.0:armhf (3.8.0-1) ...
Setting up libmagic-mgc (1:5.38-4) ...
Setting up libogdi4.1 (4.1.0+ds-1) ...
Setting up libcharls2:armhf (2.0.0+dfsg-1) ...
Setting up libminizip1:armhf (1.1-8+b1) ...
Setting up libtexlua53:armhf (2019.20190605.51237-3) ...
Setting up libarchive-zip-perl (1.67-2) ...
Setting up libglib2.0-0:armhf (2.62.5-1) ...
No schema files found: doing nothing.
Setting up distro-info-data (0.43) ...
Setting up libglvnd0:armhf (1.3.1-1) ...
Setting up fonts-lyx (2.3.4.2-2) ...
Setting up libijs-0.35:armhf (0.35-15) ...
Setting up libjxr0:armhf (1.1-6) ...
Setting up libtexluajit2:armhf (2019.20190605.51237-3) ...
Setting up libdebhelper-perl (12.9) ...
Setting up libbrotli1:armhf (1.0.7-6) ...
Setting up libfontbox-java (1:1.8.16-2) ...
Setting up libtbb2:armhf (2020.1-2) ...
Setting up binutils-common:armhf (2.34-3+rpi1) ...
Setting up x11-common (1:7.7+20) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
invoke-rc.d: WARNING: No init system and policy-rc.d missing! Defaulting to block.
Setting up libsensors-config (1:3.6.0-2) ...
Setting up libnghttp2-14:armhf (1.40.0-1+b2) ...
Setting up libmagic1:armhf (1:5.38-4) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up libqhull7:armhf (2015.2-4) ...
Setting up libmetis5:armhf (5.1.0.dfsg-5) ...
Setting up libzzip-0-13:armhf (0.13.62-3.2) ...
Setting up file (1:5.38-4) ...
Setting up fonts-urw-base35 (20170801.1-3) ...
Setting up libilmbase24:armhf (2.3.0-6) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libaec0:armhf (1.0.4-1) ...
Setting up libicu63:armhf (63.2-2) ...
Setting up gdal-data (3.0.4+dfsg-1) ...
Setting up python-babel-localedata (2.8.0+dfsg.1-2) ...
Setting up poppler-data (0.4.9-2) ...
Setting up libkrb5support0:armhf (1.17-6+b1) ...
Setting up libpython2.7-stdlib:armhf (2.7.17-1+b1) ...
Setting up mariadb-common (1:10.3.22-1) ...
update-alternatives: using /etc/mysql/mariadb.cnf to provide /etc/mysql/my.cnf (my.cnf) in auto mode
Setting up zip (3.0-11) ...
Setting up autotools-dev (20180224.1) ...
Setting up libz3-4:armhf (4.8.7-4) ...
Setting up libblas3:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libopenexr24:armhf (2.3.0-6) ...
Setting up libexpat1-dev:armhf (2.2.9-1) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libx11-data (2:1.6.8-1) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Setting up libnspr4:armhf (2:4.24-1) ...
Setting up libjbig2dec0:armhf (0.17-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Setting up libidn11:armhf (1.33-2.2) ...
Setting up libteckit0:armhf (2.5.8+ds2-5) ...
Setting up libapache-pom-java (18-1) ...
Setting up libavahi-common-data:armhf (0.7-5) ...
Setting up libdbus-1-3:armhf (1.12.16-2+b1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up t1utils (1.41-3) ...
Setting up libpng16-16:armhf (1.6.37-2) ...
Setting up libevent-core-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libevent-2.1-7:armhf (2.1.11-stable-1) ...
Setting up gcc-8-base:armhf (8.3.0-29+rpi1) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up libgeos-c1v5:armhf (3.8.0-1) ...
Setting up libmariadb3:armhf (1:10.3.22-1) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up libproj15:armhf (6.3.1-1) ...
Setting up libsensors5:armhf (1:3.6.0-2) ...
Setting up libk5crypto3:armhf (1.17-6+b1) ...
Setting up libltdl7:armhf (2.4.6-13) ...
Setting up libglapi-mesa:armhf (19.3.3-1) ...
Setting up libkpathsea6:armhf (2019.20190605.51237-3) ...
Setting up libgcc-8-dev:armhf (8.3.0-29+rpi1) ...
Setting up libgfortran5:armhf (9.2.1-25+rpi1) ...
Setting up libhdf4-0-alt (4.2.14-1+b6) ...
Setting up libgif7:armhf (5.1.9-1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1.2) ...
Setting up liburiparser1:armhf (0.9.3-2) ...
Setting up python3.8-minimal (3.8.2-1) ...
Setting up libfreexl1:armhf (1.0.5-3) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up ocl-icd-libopencl1:armhf (2.2.12-3) ...
Setting up libxshmfence1:armhf (1.3-1) ...
Setting up libfyba0:armhf (4.1.1-6) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libkmlbase1:armhf (1.3.0-8) ...
Setting up libnl-3-200:armhf (3.4.0-1) ...
Setting up libboost-python1.67.0 (1.67.0-17) ...
Setting up openmpi-common (4.0.2-5+rpi1) ...
Setting up fonts-lmodern (2.004.5-6) ...
Setting up libopenjp2-7:armhf (2.3.1-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libssh2-1:armhf (1.8.0-2.1) ...
Setting up sgml-base (1.29.1) ...
Setting up libkrb5-3:armhf (1.17-6+b1) ...
Setting up libtiff5:armhf (4.1.0+git191117-2) ...
Setting up libmpdec2:armhf (2.4.2-3) ...
Setting up libjson-c4:armhf (0.13.1+dfsg-7) ...
Setting up libjs-jquery (3.3.1~dfsg-3) ...
Setting up libboost-system1.67.0:armhf (1.67.0-17) ...
Setting up libbinutils:armhf (2.34-3+rpi1) ...
Setting up cpp-8 (8.3.0-29+rpi1) ...
Setting up libpython3.8-stdlib:armhf (3.8.2-1) ...
Setting up python3.8 (3.8.2-1) ...
Setting up python-matplotlib-data (3.1.2-2) ...
Setting up openssl (1.1.1d-2) ...
Setting up libwebpmux3:armhf (0.6.1-2) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libtinfo5:armhf (6.1+20191019-1) ...
Setting up libdrm-common (2.4.100-4+rpi1) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-8) ...
Setting up xdg-utils (1.1.3-1) ...
Setting up libsz2:armhf (1.0.4-1) ...
Setting up libsynctex2:armhf (2019.20190605.51237-3) ...
Setting up libjs-underscore (1.9.1~dfsg-1) ...
Setting up libpopt0:armhf (1.16-14) ...
Setting up libevent-pthreads-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libkmldom1:armhf (1.3.0-8) ...
Setting up libctf0:armhf (2.34-3+rpi1) ...
Setting up libgs9-common (9.50~dfsg-5) ...
Setting up libspatialite7:armhf (4.3.0a-6+b2) ...
Setting up libfile-stripnondeterminism-perl (1.6.3-2) ...
Setting up libgfortran-8-dev:armhf (8.3.0-29+rpi1) ...
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libpython3.7-stdlib:armhf (3.7.6-1+b1) ...
Setting up libevent-extra-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libpython2.7:armhf (2.7.17-1+b1) ...
Setting up liblapack3:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libpython2.7-dev:armhf (2.7.17-1+b1) ...
Setting up libxcb1:armhf (1.13.1-5) ...
Setting up libpdfbox-java (1:1.8.16-2) ...
Setting up libkmlengine1:armhf (1.3.0-8) ...
Setting up python2.7 (2.7.17-1+b1) ...
Setting up libpython3.7:armhf (3.7.6-1+b1) ...
Setting up libtool (2.4.6-13) ...
Setting up libpython2-stdlib:armhf (2.7.17-2) ...
Setting up libocct-foundation-7.3:armhf (7.3.3+dfsg1-1+rpi1) ...
Setting up libxcb-render0:armhf (1.13.1-5) ...
Setting up libpython3.7-dev:armhf (3.7.6-1+b1) ...
Setting up libxcb-glx0:armhf (1.13.1-5) ...
Setting up libedit2:armhf (3.1-20191231-1) ...
Setting up libcommons-parent-java (43-1) ...
Setting up libaec-dev:armhf (1.0.4-1) ...
Setting up libarpack2:armhf (3.7.0-3) ...
Setting up libavahi-common3:armhf (0.7-5) ...
Setting up libraw19:armhf (0.19.5-1) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up libsuperlu5:armhf (5.2.1+dfsg1-4) ...
Setting up libcommons-logging-java (1.2-2) ...
Setting up libevent-openssl-2.1-7:armhf (2.1.11-stable-1) ...
Setting up m4 (1.4.18-4) ...
Setting up libdap25:armhf (3.20.5-1) ...
Setting up libnss3:armhf (2:3.49.1-1) ...
Setting up libxcb-shm0:armhf (1.13.1-5) ...
Setting up libepsilon1:armhf (0.9.2+dfsg-4) ...
Setting up python2 (2.7.17-2) ...
Setting up libgeotiff5:armhf (1.5.1-2) ...
Setting up libnl-route-3-200:armhf (3.4.0-1) ...
Setting up libxcb-present0:armhf (1.13.1-5) ...
Setting up ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
128 added, 0 removed; done.
Setting up libpython-stdlib:armhf (2.7.17-2) ...
Setting up libjs-jquery-ui (1.12.1+dfsg-5) ...
Setting up libptexenc1:armhf (2019.20190605.51237-3) ...
Setting up libfreetype6:armhf (2.10.1-2) ...
Setting up libxcb-sync1:armhf (1.13.1-5) ...
Setting up libhdf5-103:armhf (1.10.4+repack-11) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libevent-dev (2.1.11-stable-1) ...
Setting up libhwloc15:armhf (2.1.0+dfsg-3+rpi1) ...
Setting up libgssapi-krb5-2:armhf (1.17-6+b1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up libodbc1:armhf (2.3.6-0.1+b1) ...
Setting up ucf (3.0038+nmu1) ...
Setting up libjs-sphinxdoc (1.8.5-5) ...
Setting up autoconf (2.69-11.1) ...
Setting up libxcb-dri2-0:armhf (1.13.1-5) ...
Setting up dh-strip-nondeterminism (1.6.3-2) ...
Setting up libdrm2:armhf (2.4.100-4+rpi1) ...
Setting up dwz (0.13-5) ...
Setting up libnl-3-dev:armhf (3.4.0-1) ...
Setting up groff-base (1.22.4-4) ...
Setting up xml-core (0.18+nmu1) ...
Setting up libx11-6:armhf (2:1.6.8-1) ...
Setting up libharfbuzz0b:armhf (2.6.4-1+rpi1) ...
Setting up libpython2-dev:armhf (2.7.17-2) ...
Setting up libarmadillo9 (1:9.800.4+dfsg-1) ...
Setting up libboost-random1.67.0:armhf (1.67.0-17) ...
Setting up libboost-random1.67-dev:armhf (1.67.0-17) ...
Setting up binutils-arm-linux-gnueabihf (2.34-3+rpi1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up python (2.7.17-2) ...
Setting up libavahi-client3:armhf (0.7-5) ...
Setting up libllvm9:armhf (1:9.0.1-8+rpi1) ...
Setting up libpython3-stdlib:armhf (3.7.5-3) ...
Setting up liblbfgsb0:armhf (3.0+dfsg.3-7) ...
Setting up libdrm-amdgpu1:armhf (2.4.100-4+rpi1) ...
Setting up python2.7-dev (2.7.17-1+b1) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libxcb-dri3-0:armhf (1.13.1-5) ...
Setting up libpaper1:armhf (1.1.28) ...

Creating config file /etc/papersize with new version
Setting up python3.7 (3.7.6-1+b1) ...
Setting up libocct-modeling-data-7.3:armhf (7.3.3+dfsg1-1+rpi1) ...
Setting up libibverbs1:armhf (28.0-1) ...
Setting up libfreeimage3:armhf (3.18.0+ds2-3) ...
Setting up libdrm-nouveau2:armhf (2.4.100-4+rpi1) ...
Setting up gettext (0.19.8.1-10) ...
Setting up libharfbuzz-icu0:armhf (2.6.4-1+rpi1) ...
Setting up libpython3-dev:armhf (3.7.5-3) ...
Setting up python2-dev (2.7.17-2) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up ibverbs-providers:armhf (28.0-1) ...
Setting up libdrm-radeon1:armhf (2.4.100-4+rpi1) ...
Setting up libclang1-9 (1:9.0.1-8+rpi1) ...
Setting up fontconfig-config (2.13.1-2) ...
Setting up openssh-client (1:8.1p1-5) ...
Setting up libgl1-mesa-dri:armhf (19.3.3-1) ...
Setting up libhdf5-cpp-103:armhf (1.10.4+repack-11) ...
Setting up libpq5:armhf (12.2-1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libboost-random-dev:armhf (1.67.0.2+b11) ...
Setting up libcurl3-gnutls:armhf (7.68.0-1) ...
Setting up python3 (3.7.5-3) ...
Setting up binutils (2.34-3+rpi1) ...
Setting up libpaper-utils (1.1.28) ...
Setting up libcurl4-gnutls-dev:armhf (7.68.0-1) ...
Setting up man-db (2.9.0-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-markupsafe (1.1.0-1+b1) ...
Setting up python3.7-dev (3.7.6-1+b1) ...
Setting up python3-tz (2019.3-1) ...
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libpython-dev:armhf (2.7.17-2) ...
Setting up libxnvctrl0:armhf (440.59-1) ...
Setting up libnetcdf15:armhf (1:4.7.3-1) ...
Setting up python3-six (1.14.0-2) ...
Setting up tex-common (6.13) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up libnl-route-3-dev:armhf (3.4.0-1) ...
Setting up libltdl-dev:armhf (2.4.6-13) ...
Setting up python3-roman (2.0.0-3) ...
Setting up python3-decorator (4.3.0-1.1) ...
Setting up python3-jinja2 (2.10.1-1) ...
Setting up python3-pygments (2.3.1+dfsg-1) ...
Setting up libcfitsio8:armhf (3.470-3) ...
Setting up doxygen (1.8.16-2) ...
Setting up python3-pyparsing (2.4.6-1) ...
Setting up libocct-modeling-algorithms-7.3:armhf (7.3.3+dfsg1-1+rpi1) ...
Setting up python3-certifi (2019.11.28-1) ...
Setting up libxfixes3:armhf (1:5.0.3-1) ...
Setting up sphinx-common (1.8.5-5) ...
Setting up python3-cycler (0.10.0-3) ...
Setting up libxinerama1:armhf (2:1.1.4-2) ...
Setting up libhdf5-dev (1.10.4+repack-11) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up python3-idna (2.6-2) ...
Setting up scons (3.1.2-2) ...
Setting up libnetcdf-dev (1:4.7.3-1) ...
Setting up libxt6:armhf (1:1.1.5-1+b3) ...
Setting up python3-urllib3 (1.25.8-1) ...
Setting up libcups2:armhf (2.3.1-7) ...
Setting up libdapclient6v5:armhf (3.20.5-1) ...
Setting up python3-dateutil (2.7.3-3) ...
Setting up libhwloc-dev:armhf (2.1.0+dfsg-3+rpi1) ...
Setting up libfontconfig1:armhf (2.13.1-2) ...
Setting up lsb-release (11.1.0+rpi1) ...
Setting up python3-mpmath (1.1.0-1) ...
/usr/lib/python3/dist-packages/mpmath/ctx_mp_python.py:892: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if other is 0:
/usr/lib/python3/dist-packages/mpmath/ctx_mp_python.py:986: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if other is 0:
Setting up python3-lib2to3 (3.8.0-1) ...
Setting up python-dev (2.7.17-2) ...
Setting up python3-imagesize (1.2.0-1) ...
Setting up python3-pkg-resources (44.0.0-1) ...
Setting up python3-distutils (3.8.0-1) ...
Setting up dh-python (4.20191017) ...
Setting up python3-sympy (1.4-1) ...
/usr/lib/python3/dist-packages/sympy/core/tests/test_containers.py:55: SyntaxWarning: "is not" with a literal. Did you mean "!="?
  assert Tuple(1, 2) is not (1, 2)
/usr/lib/python3/dist-packages/sympy/geometry/tests/test_plane.py:190: SyntaxWarning: "is" with a literal. Did you mean "=="?
  assert len(pl8.intersection(Ray3D(Point3D(0, 2, 3), Point3D(1, 0, 3)))) is 0
/usr/lib/python3/dist-packages/sympy/physics/vector/printing.py:155: SyntaxWarning: "is not" with a literal. Did you mean "!="?
  if len(base_split) is not 1:
/usr/lib/python3/dist-packages/sympy/plotting/plot.py:509: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if self.xscale is 'log':
/usr/lib/python3/dist-packages/sympy/plotting/plot.py:529: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if self.xscale is 'log':
/usr/lib/python3/dist-packages/sympy/plotting/plot.py:542: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if self.xscale is 'log':
/usr/lib/python3/dist-packages/sympy/plotting/plot.py:549: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if self.xscale is 'log':
/usr/lib/python3/dist-packages/sympy/polys/agca/modules.py:360: SyntaxWarning: "is" with a literal. Did you mean "=="?
  elif elem is 0:
/usr/lib/python3/dist-packages/sympy/solvers/diophantine.py:3186: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if feasible is 1:  # it's prime and k == 2
/usr/lib/python3/dist-packages/sympy/vector/coordsysrect.py:170: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if transformation.name is 'spherical':
/usr/lib/python3/dist-packages/sympy/vector/coordsysrect.py:172: SyntaxWarning: "is" with a literal. Did you mean "=="?
  elif transformation.name is 'cylindrical':
Setting up python3-attr (19.3.0-1) ...
Setting up libxft2:armhf (2.3.2-2) ...
Setting up libxmu6:armhf (2:1.1.2-2+b3) ...
Setting up gcc-8 (8.3.0-29+rpi1) ...
Setting up libxdamage1:armhf (1:1.1.5-1) ...
Setting up libxerces-c3.2:armhf (3.2.2+debian-1+b1) ...
Setting up libgs9:armhf (9.50~dfsg-5) ...
Setting up libxi6:armhf (2:1.7.9-1) ...
Setting up python3-babel (2.8.0+dfsg.1-2) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up python3-alabaster (0.7.8-1) ...
Setting up gfortran-8 (8.3.0-29+rpi1) ...
Setting up po-debconf (1.0.21) ...
Setting up preview-latex-style (11.91-2) ...
Setting up libnetcdf-c++4-1 (4.3.1-2) ...
Setting up libxcursor1:armhf (1:1.2.0-2) ...
Setting up libpoppler82:armhf (0.71.0-6) ...
Setting up libxaw7:armhf (2:1.0.13-1+b2) ...
Setting up libibverbs-dev:armhf (28.0-1) ...
Setting up ghostscript (9.50~dfsg-5) ...
Setting up libhwloc-plugins:armhf (2.1.0+dfsg-3+rpi1) ...
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up libnetcdf-c++4 (4.2-11+b1) ...
Setting up python3-packaging (19.1-2) ...
Setting up python3-chardet (3.0.4-4) ...
Setting up python3-dev (3.7.5-3) ...
Setting up python3-requests (2.22.0-2) ...
Setting up python3-kiwisolver (1.0.1-3) ...
Setting up python3-numpy (1:1.17.4-5+b1) ...
Setting up texlive-binaries (2019.20190605.51237-3) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libboost-python1.67-dev (1.67.0-17) ...
Setting up texlive-base (2019.20200218-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
Setting up python3-matplotlib (3.1.2-2) ...
Setting up libglx-mesa0:armhf (19.3.3-1) ...
Setting up python3-scipy (1.3.3-3+b1) ...
Setting up libglx0:armhf (1.3.1-1) ...
Setting up libpmix2:armhf (3.1.4-1+b1) ...
Setting up libnetcdf-c++4-dev (4.3.1-2) ...
Setting up libopenmpi3:armhf (4.0.2-5+rpi1) ...
Setting up libfltk1.3:armhf (1.3.4-10) ...
Setting up libnetcdf-cxx-legacy-dev (4.2-11+b1) ...
Setting up libfltk-images1.3:armhf (1.3.4-10) ...
Setting up python3-pyproj (2.5.0+ds-1) ...
Setting up libboost-python-dev (1.67.0.2+b11) ...
Setting up libhdf5-openmpi-103:armhf (1.10.4+repack-11) ...
Setting up libgl1:armhf (1.3.1-1) ...
Setting up texlive-latex-base (2019.20200218-1) ...
Setting up texlive-latex-recommended (2019.20200218-1) ...
Setting up texlive-pictures (2019.20200218-1) ...
Setting up texlive-fonts-recommended (2019.20200218-1) ...
Setting up libglu1-mesa:armhf (9.0.1-1) ...
Setting up openmpi-bin (4.0.2-5+rpi1) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
Setting up texlive (2019.20200218-1) ...
Setting up libfltk-gl1.3:armhf (1.3.4-10) ...
Setting up texlive-latex-extra (2019.202000218-1) ...
Setting up libsiloh5-0:armhf (4.10.2.real-7) ...
Setting up libsilo-dev:armhf (4.10.2.real-7) ...
Setting up libgl2ps1.4 (1.4.0+dfsg1-2) ...
Setting up libocct-visualization-7.3:armhf (7.3.3+dfsg1-1+rpi1) ...
Setting up libopenmpi-dev:armhf (4.0.2-5+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode
Setting up libocct-ocaf-7.3:armhf (7.3.3+dfsg1-1+rpi1) ...
Setting up libocct-data-exchange-7.3:armhf (7.3.3+dfsg1-1+rpi1) ...
Setting up mpi-default-dev (1.13) ...
Setting up libgmsh4:armhf (4.4.1+ds1-2) ...
Setting up gmsh (4.4.1+ds1-2) ...
Setting up odbcinst (2.3.6-0.1+b1) ...
Setting up dh-autoreconf (19) ...
Setting up odbcinst1debian2:armhf (2.3.6-0.1+b1) ...
Setting up libgdal26 (3.0.4+dfsg-1) ...
Setting up debhelper (12.9) ...
Setting up python3-gdal (3.0.4+dfsg-1) ...
Processing triggers for libc-bin (2.29-9+rpi1) ...
Processing triggers for sgml-base (1.29.1) ...
Setting up docutils-common (0.16+dfsg-1) ...
Processing triggers for sgml-base (1.29.1) ...
Setting up python3-docutils (0.16+dfsg-1) ...
update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
Setting up python3-sphinx (1.8.5-5) ...
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-apidoc to provide /usr/bin/sphinx-apidoc (sphinx-apidoc) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-autogen to provide /usr/bin/sphinx-autogen (sphinx-autogen) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-build to provide /usr/bin/sphinx-build (sphinx-build) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-quickstart to provide /usr/bin/sphinx-quickstart (sphinx-quickstart) in auto mode
Setting up sbuild-build-depends-python-escript-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for tex-common (6.13) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.34-3+rpi1 dpkg-dev_1.19.7 g++-9_9.2.1-25+rpi1 gcc-8_8.3.0-29+rpi1 gcc-9_9.2.1-25+rpi1 libc6-dev_2.29-9+rpi1 libstdc++-9-dev_9.2.1-25+rpi1 libstdc++6_9.2.1-25+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-5 binutils_2.34-3+rpi1 binutils-arm-linux-gnueabihf_2.34-3+rpi1 binutils-common_2.34-3+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-8_8.3.0-29+rpi1 cpp-9_9.2.1-25+rpi1 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.9 debianutils_4.9.1 dh-autoreconf_19 dh-python_4.20191017 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dirmngr_2.2.19-1 distro-info-data_0.43 docutils-common_0.16+dfsg-1 doxygen_1.8.16-2 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.5-2 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-6 fonts-lyx_2.3.4.2-2 fonts-mathjax_2.7.4+dfsg-1 fonts-urw-base35_20170801.1-3 g++_4:9.2.1-3.1+rpi1 g++-9_9.2.1-25+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-6-base_6.5.0-1+rpi3 gcc-7-base_7.5.0-3+b1 gcc-8_8.3.0-29+rpi1 gcc-8-base_8.3.0-29+rpi1 gcc-9_9.2.1-25+rpi1 gcc-9-base_9.2.1-25+rpi1 gdal-data_3.0.4+dfsg-1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran-8_8.3.0-29+rpi1 ghostscript_9.50~dfsg-5 gmsh_4.4.1+ds1-2 gnupg_2.2.19-1 gnupg-l10n_2.2.19-1 gnupg-utils_2.2.19-1 gpg_2.2.19-1 gpg-agent_2.2.19-1 gpg-wks-client_2.2.19-1 gpg-wks-server_2.2.19-1 gpgconf_2.2.19-1 gpgsm_2.2.19-1 gpgv_2.2.19-1 grep_3.4-1 groff-base_1.22.4-4 gzip_1.9-3 hdf5-helpers_1.10.4+repack-11 hostname_3.23 ibverbs-providers_28.0-1 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-3 libacl1_2.2.53-5 libaec-dev_1.0.4-1 libaec0_1.0.4-1 libapache-pom-java_18-1 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.67-2 libarmadillo9_1:9.800.4+dfsg-1 libarpack2_3.7.0-3 libasan5_9.2.1-25+rpi1 libassuan0_2.5.3-7 libatomic1_9.2.1-25+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2+b1 libavahi-client3_0.7-5 libavahi-common-data_0.7-5 libavahi-common3_0.7-5 libbinutils_2.34-3+rpi1 libblas3_3.9.0-1 libblkid1_2.34-0.1 libboost-python-dev_1.67.0.2+b11 libboost-python1.67-dev_1.67.0-17 libboost-python1.67.0_1.67.0-17 libboost-random-dev_1.67.0.2+b11 libboost-random1.67-dev_1.67.0-17 libboost-random1.67.0_1.67.0-17 libboost-system1.67.0_1.67.0-17 libboost1.67-dev_1.67.0-17 libbrotli1_1.0.7-6 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.29-9+rpi1 libc-dev-bin_2.29-9+rpi1 libc6_2.29-9+rpi1 libc6-dev_2.29-9+rpi1 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2.1 libcap2_1:2.27-1 libcap2-bin_1:2.27-1 libcc1-0_9.2.1-25+rpi1 libcfitsio8_3.470-3 libcharls2_2.0.0+dfsg-1 libclang1-9_1:9.0.1-8+rpi1 libcom-err2_1.45.5-2 libcommons-logging-java_1.2-2 libcommons-parent-java_43-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.10-10+b5 libcrypt1_1:4.4.10-10+b5 libctf-nobfd0_2.33.90.20200122-2+rpi1 libctf0_2.34-3+rpi1 libcups2_2.3.1-7 libcurl3-gnutls_7.68.0-1 libcurl4-gnutls-dev_7.68.0-1 libdap25_3.20.5-1 libdapclient6v5_3.20.5-1 libdb5.3_5.3.28+dfsg1-0.6 libdbus-1-3_1.12.16-2+b1 libdebconfclient0_0.250 libdebhelper-perl_12.9 libdpkg-perl_1.19.7 libdrm-amdgpu1_2.4.100-4+rpi1 libdrm-common_2.4.100-4+rpi1 libdrm-nouveau2_2.4.100-4+rpi1 libdrm-radeon1_2.4.100-4+rpi1 libdrm2_2.4.100-4+rpi1 libedit2_3.1-20191231-1 libelf1_0.176-1.1 libepsilon1_0.9.2+dfsg-4 libevent-2.1-7_2.1.11-stable-1 libevent-core-2.1-7_2.1.11-stable-1 libevent-dev_2.1.11-stable-1 libevent-extra-2.1-7_2.1.11-stable-1 libevent-openssl-2.1-7_2.1.11-stable-1 libevent-pthreads-2.1-7_2.1.11-stable-1 libexpat1_2.2.9-1 libexpat1-dev_2.2.9-1 libext2fs2_1.45.5-2 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi7_3.3-3 libfile-stripnondeterminism-perl_1.6.3-2 libfltk-gl1.3_1.3.4-10 libfltk-images1.3_1.3.4-10 libfltk1.3_1.3.4-10 libfontbox-java_1:1.8.16-2 libfontconfig1_2.13.1-2 libfreeimage3_3.18.0+ds2-3 libfreetype6_2.10.1-2 libfreexl1_1.0.5-3 libfyba0_4.1.1-6 libgcc-8-dev_8.3.0-29+rpi1 libgcc-9-dev_9.2.1-25+rpi1 libgcc1_1:9.2.1-25+rpi1 libgcrypt20_1.8.5-3 libgdal26_3.0.4+dfsg-1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgeos-3.8.0_3.8.0-1 libgeos-c1v5_3.8.0-1 libgeotiff5_1.5.1-2 libgfortran-8-dev_8.3.0-29+rpi1 libgfortran5_9.2.1-25+rpi1 libgif7_5.1.9-1 libgl1_1.3.1-1 libgl1-mesa-dri_19.3.3-1 libgl2ps1.4_1.4.0+dfsg1-2 libglapi-mesa_19.3.3-1 libglib2.0-0_2.62.5-1 libglu1-mesa_9.0.1-1 libglvnd0_1.3.1-1 libglx-mesa0_19.3.3-1 libglx0_1.3.1-1 libgmp10_2:6.1.2+dfsg-4 libgmsh4_4.4.1+ds1-2 libgnutls30_3.6.12-2 libgomp1_9.2.1-25+rpi1 libgpg-error0_1.36-7 libgraphite2-3_1.3.13-11 libgs9_9.50~dfsg-5 libgs9-common_9.50~dfsg-5 libgssapi-krb5-2_1.17-6+b1 libharfbuzz-icu0_2.6.4-1+rpi1 libharfbuzz0b_2.6.4-1+rpi1 libhdf4-0-alt_4.2.14-1+b6 libhdf5-103_1.10.4+repack-11 libhdf5-cpp-103_1.10.4+repack-11 libhdf5-dev_1.10.4+repack-11 libhdf5-openmpi-103_1.10.4+repack-11 libhogweed5_3.5.1+really3.5.1-2 libhwloc-dev_2.1.0+dfsg-3+rpi1 libhwloc-plugins_2.1.0+dfsg-3+rpi1 libhwloc15_2.1.0+dfsg-3+rpi1 libibverbs-dev_28.0-1 libibverbs1_28.0-1 libice6_2:1.0.9-2 libicu63_63.2-2 libidn11_1.33-2.2 libidn2-0_2.2.0-2 libijs-0.35_0.35-15 libilmbase24_2.3.0-6 libisl22_0.22-2 libjbig0_2.1-3.1+b2 libjbig2dec0_0.17-1 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjs-jquery_3.3.1~dfsg-3 libjs-jquery-ui_1.12.1+dfsg-5 libjs-mathjax_2.7.4+dfsg-1 libjs-sphinxdoc_1.8.5-5 libjs-underscore_1.9.1~dfsg-1 libjson-c4_0.13.1+dfsg-7 libjxr0_1.1-6 libk5crypto3_1.17-6+b1 libkeyutils1_1.6.1-2 libkmlbase1_1.3.0-8 libkmldom1_1.3.0-8 libkmlengine1_1.3.0-8 libkpathsea6_2019.20190605.51237-3 libkrb5-3_1.17-6+b1 libkrb5support0_1.17-6+b1 libksba8_1.3.5-2 liblapack3_3.9.0-1 liblbfgsb0_3.0+dfsg.3-7 liblcms2-2_2.9-3 libldap-2.4-2_2.4.48+dfsg-1+b2 libldap-common_2.4.48+dfsg-1 libllvm9_1:9.0.1-8+rpi1 liblocale-gettext-perl_1.07-4 libltdl-dev_2.4.6-13 libltdl7_2.4.6-13 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmariadb3_1:10.3.22-1 libmetis5_5.1.0.dfsg-5 libminizip1_1.1-8+b1 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-3 libmpfr6_4.0.2-1 libncursesw6_6.1+20191019-1 libnetcdf-c++4_4.2-11+b1 libnetcdf-c++4-1_4.3.1-2 libnetcdf-c++4-dev_4.3.1-2 libnetcdf-cxx-legacy-dev_4.2-11+b1 libnetcdf-dev_1:4.7.3-1 libnetcdf15_1:4.7.3-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1+b2 libnl-3-200_3.4.0-1 libnl-3-dev_3.4.0-1 libnl-route-3-200_3.4.0-1 libnl-route-3-dev_3.4.0-1 libnpth0_1.6-1 libnspr4_2:4.24-1 libnss3_2:3.49.1-1 libocct-data-exchange-7.3_7.3.3+dfsg1-1+rpi1 libocct-foundation-7.3_7.3.3+dfsg1-1+rpi1 libocct-modeling-algorithms-7.3_7.3.3+dfsg1-1+rpi1 libocct-modeling-data-7.3_7.3.3+dfsg1-1+rpi1 libocct-ocaf-7.3_7.3.3+dfsg1-1+rpi1 libocct-visualization-7.3_7.3.3+dfsg1-1+rpi1 libodbc1_2.3.6-0.1+b1 libogdi4.1_4.1.0+ds-1 libopenexr24_2.3.0-6 libopenjp2-7_2.3.1-1 libopenmpi-dev_4.0.2-5+rpi1 libopenmpi3_4.0.2-5+rpi1 libp11-kit0_0.23.18.1-2+b1 libpam-cap_1:2.27-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpaper-utils_1.1.28 libpaper1_1.1.28 libpciaccess0_0.14-1 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12 libpdfbox-java_1:1.8.16-2 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libpixman-1-0_0.36.0-1 libpmix2_3.1.4-1+b1 libpng16-16_1.6.37-2 libpoppler82_0.71.0-6 libpopt0_1.16-14 libpq5_12.2-1 libproj15_6.3.1-1 libpsl5_0.20.2-2 libptexenc1_2019.20190605.51237-3 libpython-dev_2.7.17-2 libpython-stdlib_2.7.17-2 libpython2-dev_2.7.17-2 libpython2-stdlib_2.7.17-2 libpython2.7_2.7.17-1+b1 libpython2.7-dev_2.7.17-1+b1 libpython2.7-minimal_2.7.17-1+b1 libpython2.7-stdlib_2.7.17-1+b1 libpython3-dev_3.7.5-3 libpython3-stdlib_3.7.5-3 libpython3.7_3.7.6-1+b1 libpython3.7-dev_3.7.6-1+b1 libpython3.7-minimal_3.7.6-1+b1 libpython3.7-stdlib_3.7.6-1+b1 libpython3.8-minimal_3.8.2-1 libpython3.8-stdlib_3.8.2-1 libqhull7_2015.2-4 libraw19_0.19.5-1 libreadline8_8.0-3 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.2-2+rpi1 libselinux1_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsensors-config_1:3.6.0-2 libsensors5_1:3.6.0-2 libsepol1_3.0-1 libsigsegv2_2.12-2 libsilo-dev_4.10.2.real-7 libsiloh5-0_4.10.2.real-7 libsm6_2:1.2.3-1 libsmartcols1_2.34-0.1 libspatialite7_4.3.0a-6+b2 libsqlite3-0_3.31.0+really3.30.1+fossil191229-1 libss2_1.45.5-2 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1d-2 libstdc++-9-dev_9.2.1-25+rpi1 libstdc++6_9.2.1-25+rpi1 libsub-override-perl_0.09-2 libsuperlu5_5.2.1+dfsg1-4 libsynctex2_2019.20190605.51237-3 libsystemd0_244.1-1+rpi1 libsz2_1.0.4-1 libtasn1-6_4.15.0-2 libtbb2_2020.1-2 libteckit0_2.5.8+ds2-5 libtexlua53_2019.20190605.51237-3 libtexluajit2_2019.20190605.51237-3 libtext-charwidth-perl_0.04-10 libtext-iconv-perl_1.7-7 libtiff5_4.1.0+git191117-2 libtinfo5_6.1+20191019-1 libtinfo6_6.1+20191019-1 libtool_2.4.6-13 libubsan1_9.2.1-25+rpi1 libuchardet0_0.0.6-3 libudev1_244.1-1+rpi1 libunistring2_0.9.10-2 liburiparser1_0.9.3-2 libuuid1_2.34-0.1 libwebp6_0.6.1-2 libwebpmux3_0.6.1-2 libx11-6_2:1.6.8-1 libx11-data_2:1.6.8-1 libx11-xcb1_2:1.6.8-1 libxapian30_1.4.14-2 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-dri2-0_1.13.1-5 libxcb-dri3-0_1.13.1-5 libxcb-glx0_1.13.1-5 libxcb-present0_1.13.1-5 libxcb-render0_1.13.1-5 libxcb-shm0_1.13.1-5 libxcb-sync1_1.13.1-5 libxcb1_1.13.1-5 libxcursor1_1:1.2.0-2 libxdamage1_1:1.1.5-1 libxdmcp6_1:1.1.2-3 libxerces-c3.2_3.2.2+debian-1+b1 libxext6_2:1.3.3-1+b2 libxfixes3_1:5.0.3-1 libxft2_2.3.2-2 libxi6_2:1.7.9-1 libxinerama1_2:1.1.4-2 libxml2_2.9.4+dfsg1-8 libxmu6_2:1.1.2-2+b3 libxnvctrl0_440.59-1 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxshmfence1_1.3-1 libxt6_1:1.1.5-1+b3 libxxf86vm1_1:1.1.4-1+b2 libz3-4_4.8.7-4 libzstd1_1.4.4+dfsg-1+rpi1 libzzip-0-13_0.13.62-3.2 linux-libc-dev_5.2.17-1+rpi1+b2 login_1:4.8-1 logsave_1.45.5-2 lsb-base_11.1.0+rpi1 lsb-release_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mariadb-common_1:10.3.22-1 mawk_1.3.4.20200120-1 mime-support_3.64 mount_2.34-0.1 mpi-default-dev_1.13 mysql-common_5.8+1.0.5 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 netbase_6.0 ocl-icd-libopencl1_2.2.12-3 odbcinst_2.3.6-0.1+b1 odbcinst1debian2_2.3.6-0.1+b1 openmpi-bin_4.0.2-5+rpi1 openmpi-common_4.0.2-5+rpi1 openssh-client_1:8.1p1-5 openssl_1.1.1d-2 passwd_1:4.8-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 po-debconf_1.0.21 poppler-data_0.4.9-2 preview-latex-style_11.91-2 proj-data_6.3.1-1 python_2.7.17-2 python-babel-localedata_2.8.0+dfsg.1-2 python-dev_2.7.17-2 python-matplotlib-data_3.1.2-2 python-minimal_2.7.17-2 python2_2.7.17-2 python2-dev_2.7.17-2 python2-minimal_2.7.17-2 python2.7_2.7.17-1+b1 python2.7-dev_2.7.17-1+b1 python2.7-minimal_2.7.17-1+b1 python3_3.7.5-3 python3-alabaster_0.7.8-1 python3-attr_19.3.0-1 python3-babel_2.8.0+dfsg.1-2 python3-certifi_2019.11.28-1 python3-chardet_3.0.4-4 python3-cycler_0.10.0-3 python3-dateutil_2.7.3-3 python3-decorator_4.3.0-1.1 python3-dev_3.7.5-3 python3-distutils_3.8.0-1 python3-docutils_0.16+dfsg-1 python3-gdal_3.0.4+dfsg-1 python3-idna_2.6-2 python3-imagesize_1.2.0-1 python3-jinja2_2.10.1-1 python3-kiwisolver_1.0.1-3 python3-lib2to3_3.8.0-1 python3-markupsafe_1.1.0-1+b1 python3-matplotlib_3.1.2-2 python3-minimal_3.7.5-3 python3-mpmath_1.1.0-1 python3-numpy_1:1.17.4-5+b1 python3-packaging_19.1-2 python3-pkg-resources_44.0.0-1 python3-pygments_2.3.1+dfsg-1 python3-pyparsing_2.4.6-1 python3-pyproj_2.5.0+ds-1 python3-requests_2.22.0-2 python3-roman_2.0.0-3 python3-scipy_1.3.3-3+b1 python3-six_1.14.0-2 python3-sphinx_1.8.5-5 python3-sympy_1.4-1 python3-tz_2019.3-1 python3-urllib3_1.25.8-1 python3.7_3.7.6-1+b1 python3.7-dev_3.7.6-1+b1 python3.7-minimal_3.7.6-1+b1 python3.8_3.8.2-1 python3.8-minimal_3.8.2-1 raspbian-archive-keyring_20120528.2 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-escript-dummy_0.invalid.0 scons_3.1.2-2 sed_4.7-1 sensible-utils_0.0.12+nmu1 sgml-base_1.29.1 sphinx-common_1.8.5-5 sysvinit-utils_2.96-2.1 t1utils_1.41-3 tar_1.30+dfsg-6 tex-common_6.13 texlive_2019.20200218-1 texlive-base_2019.20200218-1 texlive-binaries_2019.20190605.51237-3 texlive-fonts-recommended_2019.20200218-1 texlive-latex-base_2019.20200218-1 texlive-latex-extra_2019.202000218-1 texlive-latex-recommended_2019.20200218-1 texlive-pictures_2019.20200218-1 ttf-bitstream-vera_1.10-8 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 x11-common_1:7.7+20 xdg-utils_1.1.3-1 xml-core_0.18+nmu1 xz-utils_5.2.4-1 zip_3.0-11 zlib1g_1:1.2.11.dfsg-1.2 zlib1g-dev_1:1.2.11.dfsg-1.2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue Feb 25 06:34:01 2020 UTC
gpgv:                using RSA key 82383CE9165B347C787081A2CBE6BB4E5D9AD3A5
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./python-escript_5.5-4.dsc
dpkg-source: info: extracting python-escript in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking python-escript_5.5.orig.tar.xz
dpkg-source: info: unpacking python-escript_5.5-4.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying fixmathjax
dpkg-source: info: applying 32bitboostextract
dpkg-source: info: applying openmpi-version.patch
dpkg-source: info: applying exception.patch
dpkg-source: info: applying undo-py3.patch
dpkg-source: info: applying enable-silo.patch
dpkg-source: info: applying openmpi-multiarch.patch
dpkg-source: info: applying latex-fix.patch
dpkg-source: info: applying py3.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-495f63ea-3ac8-41e9-af40-9be3495ea9db
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package python-escript
dpkg-buildpackage: info: source version 5.5-4
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
dh clean  -v
   dh_autoreconf_clean -O-v
   debian/rules override_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
find . -name '*.pyc' -delete 
rm -f itest.sh utest.sh
rm -rf build condif.log esys include lib release .sconf_tmp .sconsign.dblite config.log .sconf_temp
rm -rf /<<PKGBUILDDIR>>/debian/python3-escript
rm -rf /<<PKGBUILDDIR>>/debian/python3-escript-mpi
rm -rf /<<PKGBUILDDIR>>/debian/python-escript-doc
rm -rf /<<PKGBUILDDIR>>/debian/tmp3
rm -rf /<<PKGBUILDDIR>>/debian/tmp3M
rm -rf /<<PKGBUILDDIR>>/debian/stage3
rm -rf /<<PKGBUILDDIR>>/debian/stage3M
rm -rf /<<PKGBUILDDIR>>/debian/tmp/*
rm -f debian/files
rm -f debian/substvars
dh_clean
	rm -f debian/debhelper-build-stamp
	rm -rf debian/.debhelper/
	rm -f -- debian/python3-escript.substvars debian/python3-escript-mpi.substvars debian/python-escript-doc.substvars debian/files
	rm -fr -- debian/python3-escript/ debian/tmp/ debian/python3-escript-mpi/ debian/python-escript-doc/
	find .  \( \( \
		\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} + \) -o \
		\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
 debian/rules build-arch
dh build-arch  -v
   dh_update_autotools_config -a -O-v
   dh_autoreconf -a -O-v
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# Build steps for py3
mkdir -p /<<PKGBUILDDIR>>/debian/stage3
scons  -j4   cc_optim=' -O3  '  build_dir=/<<PKGBUILDDIR>>/debian/tmp3 verbose=on prefix=/<<PKGBUILDDIR>>/debian/stage3 options_file=debian/sid_options.py docs
scons: Reading SConscript files ...
3.7.6 (default, Dec 19 2019, 09:25:23) 
[GCC 9.2.1 20200104]
Building with the following additional flags from debian: [['cpp_flags', '-Wdate-time -D_FORTIFY_SOURCE=2'], ['cxx_extra', '-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized'], ['ld_extra', '-Wl,-z,relro -Wl,-z,now']]
Using options in debian/sid_options.py.
/bin/sh: 1: svnversion: not found
Using svn revision information from file. Got revision = 6948
Checking whether the C++ compiler works... yes
Checking for C++ function gethostname()... yes
Checking for C++ header file byteswap.h... yes
Checking for C++ function SCbswap32()... yes
Checking for C++ header file sys/endian.h... no
Checking for C++ header file libkern/OSByteOrder.h... no
Checking for working complex std::acos()... yes
Checking for C++ header file Python.h... yes
Checking for C++ function Py_Exit()... yes
Checking for C++ library boost_python38... yes
Checking for C++ library boost_python38... yes
Found boost/python/numpy.hpp. Building with boost numpy support.
Checking for C++ header file numpy/ndarrayobject.h... yes
Checking for C++ library netcdf_c++4... yes
Checking for C++ library siloh5... yes
Checking for C++ library boost_iostreams... no
Traceback (most recent call last):
  File "<string>", line 1, in <module>
ImportError: cannot import name 'griddata' from 'matplotlib.mlab' (/usr/lib/python3/dist-packages/matplotlib/mlab.py)
Chmod("utest.sh", 0755)
Generated utest.sh.
Chmod("itest.sh", 0755)
Generated itest.sh.
Chmod("/<<PKGBUILDDIR>>/debian/stage3/bin/run-escript", 0755)
Delete(["debian/stage3/lib/pythonMPI", "debian/stage3/lib/pythonMPIredirect"])
Delete("debian/stage3/bin/escript-overlord")
scons: done reading SConscript files.
scons: Building targets ...
cd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
cd debian/tmp3/posix/doc/install && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{install.tex} install.tex
entering extended mode
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esy
sdoc.cls
Document Class: esysdoc 
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
)
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))

Package geometry Warning: Over-specification in `h'-direction.
    `width' (478.00812pt) is ignored.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.styentering extended mode
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
install.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
esysdoc.cls
Document Class: esysdoc 
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)))
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty))
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)

Package geometry Warning: Over-specification in `h'-direction.
    `width' (478.00812pt) is ignored.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty
(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty))
(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty))
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty)
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty))
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty))
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r_defs.tex (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty
****************************************
* Local config file subfigure.cfg used *
****************************************
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)))
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
install_defs.tex (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
\@input{elist.aux}

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/eli
st.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)
Package `listing', V1.2, <1999/05/25>
))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
elist.tex) (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty)
Package `listing', V1.2, <1999/05/25>
) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/ver
info.tex)
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty))
Writing index file user.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def
(/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty
Excluding comment 'comment')
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
verinfo.tex))
Writing index file install.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def
No file user.aux.
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd))
No file install.aux.
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
)
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty))
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))))
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)}
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cop
yrights.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
docguide.tex
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/doc
guide.tex [2])) [2 [3]] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [3]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
intro.tex [4]

LaTeX Warning: Reference `app:py3' on page 4 undefined on input line 74.


LaTeX Warning: Reference `app:changes' on page 4 undefined on input line 80.


LaTeX Warning: Reference `app:ourrefs' on page 4 undefined on input line 85.

[4]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cur
rentdev.tex [5]) [6]
Chapter 1.

LaTeX Warning: Reference `chap:source' on page 5 undefined on input line 30.


LaTeX Warning: Reference `app:cxxfeatures' on page 5 undefined on input line 31
.


LaTeX Warning: Reference `app:trilinos' on page 5 undefined on input line 33.

) [7] [5
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Tut
orialPDE.tex [8]]
Chapter 1.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fir
ststep.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
flatpak.tex [6]
Chapter 2.
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty

LaTeX Warning: Reference `fig:FirstSteps.1' on page 9 undefined on input line 3
3.


LaTeX Warning: Reference `eq:FirstSteps.1' on page 9 undefined on input line 58
.

[9 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/
figures/FirstStepDomain.pdf>]

LaTeX Warning: Reference `fig:FirstSteps.1' on page 10 undefined on input line 
94.


LaTeX Warning: Reference `eq:FirstSteps.2' on page 10 undefined on input line 9
8.


LaTeX Warning: Reference `eq:FirstSteps.1.sum' on page 10 undefined on input li
ne 117.


LaTeX Warning: Reference `eq:FirstSteps.2' on page 10 undefined on input line 1
18.


LaTeX Warning: Reference `eq:FirstSteps.2d' on page 10 undefined on input line 
119.


LaTeX Warning: Reference `fig:FirstSteps.2' on page 10 undefined on input line 
145.


LaTeX Warning: Reference `Zienc,NumHand' on page 10 undefined on input line 148
.

[10])
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty))) [7]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
conda.tex [8]
Chapter 3.
) [9]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
docker.tex [10]

LaTeX Warning: Reference `chap:finley' on page 11 undefined on input line 194.


LaTeX Warning: Reference `chap:ripley' on page 11 undefined on input line 194.


LaTeX Warning: Reference `chap:speckley' on page 11 undefined on input line 195
.

[11 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/FirstStepMesh.pdf>]
Chapter 4.
) [11]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
source.tex [12]
Chapter 5.

LaTeX Warning: Reference `sec:needpar' on page 13 undefined on input line 26.

(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)

LaTeX Warning: Reference `app:cxxfeatures' on page 13 undefined on input line 3
7.

[13]

LaTeX Warning: Reference `sec:build' on page 14 undefined on input line 73.


LaTeX Warning: Reference `sec:othersrc' on page 14 undefined on input line 96.


LaTeX Warning: Reference `sec:debsrc' on page 14 undefined on input line 98.


LaTeX Warning: Reference `sec:ubsrc' on page 14 undefined on input line 99.


LaTeX Warning: Reference `sec:susesrc' on page 14 undefined on input line 100.


LaTeX Warning: Reference `sec:centossrc' on page 14 undefined on input line 101
.


LaTeX Warning: Reference `sec:fedorasrc' on page 14 undefined on input line 102
.


LaTeX Warning: Reference `sec:macportsrc' on page 14 undefined on input line 10
3.


LaTeX Warning: Reference `sec:homebrewsrc' on page 14 undefined on input line 1
04.


LaTeX Warning: Reference `sec:freebsdsrc' on page 14 undefined on input line 10
5.


LaTeX Warning: Reference `sec:cleanup' on page 14 undefined on input line 108.

[14]

LaTeX Warning: Reference `eq:FirstSteps.2' on page 12 undefined on input line 2
05.


LaTeX Warning: Reference `eq:FirstSteps.2c' on page 12 undefined on input line 
214.


LaTeX Warning: Reference `ESCRIPT CHAP' on page 12 undefined on input line 223.


[12]
Underfull \hbox (badness 10000) in paragraph at lines 152--153


Underfull \hbox (badness 10000) in paragraph at lines 195--196

[15]cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex


LaTeX Warning: Citation `matplotlib' on page 13 undefined on input line 312.


LaTeX Warning: Citation `mayavi' on page 13 undefined on input line 317.


LaTeX Warning: Citation `VisIt' on page 13 undefined on input line 317.

[13]

LaTeX Warning: Reference `sec:cleanup' on page 16 undefined on input line 228.


LaTeX Warning: Reference `sec:cleanup' on page 16 undefined on input line 256.


Overfull \hbox (19.96072pt too wide) in paragraph at lines 266--267
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 
[16]This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/esysdoc.cls
Document Class: esysdoc 
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) [14
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/user/figures/FirstStepResultMATPLOTLIB.pdf)>]
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))

LaTeX Warning: Reference `sec:cleanup' on page 17 undefined on input line 307.

Excluding 'comment' comment. [17]

Package geometry Warning: Over-specification in `h'-direction.
    `width' (478.00812pt) is ignored.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [18]
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty

LaTeX Warning: Reference `app:trilinos' on page 19 undefined on input line 481.


) [19]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
cxx11.tex [20])
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
Appendix A.
)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty [21)]
(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)

LaTeX Warning: Reference `fig:FirstSteps.3b' on page 15 undefined on input line
 407.


LaTeX Warning: Citation `matplotlib' on page 15 undefined on input line 408.


LaTeX Warning: Citation `mayavi' on page 15 undefined on input line 426.


LaTeX Warning: Citation `VisIt' on page 15 undefined on input line 426.

[15
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
trilinos.tex
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty [22]
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/FirstStepResult.pdf>
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty])
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def

LaTeX Warning: Reference `fig:FirstSteps.3' on page 16 undefined on input line 
470.

)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dif
fusion.tex)))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
Appendix B.
[23]
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd)))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex

(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)

LaTeX Warning: Reference `DIFFUSION FIG 1' on page 16 undefined on input line 2
4.


LaTeX Warning: Reference `DIFFUSION TEMP SEC' on page 16 undefined on input lin
e 32.


LaTeX Warning: Reference `DIFFUSION HELM SEC' on page 16 undefined on input lin
e 35.


LaTeX Warning: Reference `DIFFUSION TRANS SEC' on page 16 undefined on input li
ne 36.


LaTeX Warning: Reference `FirstSteps' on page 16 undefined on input line 49.

[16 [24)] </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/DiffusionDomain.pdf>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
install.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
intro.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
flatpak.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
conda.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
docker.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
source.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
cxx11.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
trilinos.aux))
kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tctt1000
)

LaTeX Warning: Reference `DIFFUSION TEMP EQ 1' on page 17 undefined on input li
ne 72.


LaTeX Warning: Reference `DIFFUSION TEMP EQ 2' on page 17 undefined on input li
ne 79.


LaTeX Warning: Reference `DIFFUSION TEMP EQ 1' on page 17 undefined on input li
ne 92.


LaTeX Warning: Reference `DIFFUSION TEMP EQ 4' on page 17 undefined on input li
ne 98.


LaTeX Warning: Reference `DIFFUSION TEMP EQ 2' on page 17 undefined on input li
ne 104.


LaTeX Warning: Reference `DIFFUSION TEMP EQ 2222' on page 17 undefined on input
 line 121.


LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 17 undefined on input li
ne 126.


LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 17 undefined on input li
ne 127.


LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 17 undefined on input lin
e 136.


LaTeX Warning: Reference `LINEARPDE.SINGLE.1 TUTORIAL' on page 17 undefined on 
input line 145.


LaTeX Warning: Reference `LINEARPDE.SINGLE.3 TUTORIAL' on page 17 undefined on 
input line 153.


LaTeX Warning: Reference `LINEARPDE.SINGLE.1 TUTORIAL' on page 17 undefined on 
input line 154.


LaTeX Warning: Reference `LINEARPDE.SINGLE.2 TUTORIAL' on page 17 undefined on 
input line 154.


LaTeX Warning: Reference `FirstSteps' on page 17 undefined on input line 156.

[17
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.styThis is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty])
(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.styentering extended mode
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.tex)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/esysdoc.cls
Document Class: esysdoc 
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty))
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty))
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def

Package geometry Warning: Over-specification in `h'-direction.
    `width' (478.00812pt) is ignored.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)

LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 18 undefined on input li
ne 161.


LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li
ne 161.


LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li
ne 177.


LaTeX Warning: Reference `LINEARPDE.SINGLE.2 TUTORIAL' on page 18 undefined on 
input line 179.

[18
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty])
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty))
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)

LaTeX Warning: Reference `FirstSteps' on page 19 undefined on input line 274.


LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 19 undefined on input li
ne 306.

[19])
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty))
(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty))
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)))
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook_defs.tex
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty
****************************************
* Local config file subfigure.cfg used *
****************************************
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)

LaTeX Warning: Reference `DIFFUSION TEMP EQ 1b' on page 20 undefined on input l
ine 318.

[20
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty]))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def
(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)

LaTeX Warning: Reference `DIFFUSION FIG 2' on page 21 undefined on input line 4
03.

))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wav
e.tex)
(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty))
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)
(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty))
(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty

LaTeX Warning: Reference `WAVE FIG 1.2' on page 21 undefined on input line 61.

[21 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/DiffusionRes1.pdf> </<<PKGBUILDDIR>>/de
bian/tmp3/posix/doc/user/figures/DiffusionRes16.pdf> </build/python-escript-rg4
IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/DiffusionRes32.pdf> <
/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/figu
res/DiffusionRes48.pdf>]
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)

LaTeX Warning: Reference `WAVE natural' on page 22 undefined on input line 87.


LaTeX Warning: Reference `WAVE source' on page 22 undefined on input line 96.


LaTeX Warning: Reference `WAVE FIG 1.1' on page 22 undefined on input line 97.


LaTeX Warning: Reference `SEC LinearPDE' on page 22 undefined on input line 105
.

[22 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/waveu.pdf, page is rotated 90 degrees>]
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty)))

LaTeX Warning: Reference `WAVE dyn 3aa' on page 23 undefined on input line 121.


[23
(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/wavea.pdf, page is rotated 90 degrees>)]
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def)
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty
(/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty)
(/usr/share/texlive/texmf-dist/tex/latex/cite/chapterbib.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))))
\gdef\@extra@binfo{@-1}\@writefile{toc}{\gdef \the@ipfilectr{@-1}}\@writefile{l
of}{\gdef \the@ipfilectr{@-1}}\@writefile{lot}{\gdef \the@ipfilectr{@-1}}
\@input{elist.aux}

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/elist.tex
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty)
Package `listing', V1.2, <1999/05/25>
)
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty))
\gdef\@extra@binfo{}\@writefile{toc}{\gdef \the@ipfilectr{}}\@writefile{lof}{\g
def \the@ipfilectr{}}\@writefile{lot}{\gdef \the@ipfilectr{}}
) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/verinfo.tex
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)
Writing index file cookbook.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def)))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)
No file cookbook.aux.
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd))
\@input{elist.aux}

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/elist.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty
Package `listing', V1.2, <1999/05/25>
)mkdir: cannot create directory '././sbuild-nonexistent': Permission denied
) (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty

LaTeX Warning: Reference `LUMPING' on page 24 undefined on input line 214.

[24
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)]
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd))
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty
****************************************
* Local config file subfigure.cfg used *
****************************************
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tctt1000
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/defs.tex
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/verinfo.tex)
Writing index file inversion.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty)This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf)

No file inversion.aux.
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt1000.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt.mf)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf)
 Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf)
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf
 Ok [0]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) [1] [2] [3] [4]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) [5] [6] [7] [8] [9] [10] [11] [12]

LaTeX Warning: Reference `SEC ESCRIPT DATA' on page 25 undefined on input line 
228.


LaTeX Warning: Reference `DIFFUSION CHAP' on page 25 undefined on input line 25
1.

[25
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [27] [29])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf
 Ok [100]
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
[Loading MPS to PDF converter (version 2006.09.02).]
)] (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [109] [98] [99] [108])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg
 Ok [13]) [1 [18] [21] [22] [23]){/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map [24] [25] [26]
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty [28] [31]}
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)]
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty [32]) [36] [39] [44]
[45] [46]) [42] [47] [60] [61] [62]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/docguide.tex [77] [79]

LaTeX Warning: Reference `WAVE dyn 66' on page 26 undefined on input line 323.


LaTeX Warning: Reference `WAVE FIG 2' on page 26 undefined on input line 335.


LaTeX Warning: Citation `GNUPLOT' on page 26 undefined on input line 346.

(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [87] [2 [110] [91]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)] [93]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) [94] [95]
[96] [126]

LaTeX Warning: Citation `GNUPLOT' on page 26 undefined on input line 359.

[26 [127] [128] [129] [130] [131] [132] </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/Wave11.pdf> </<<PKGBUILDDIR>>/debian/tm
p3/posix/doc/user/figures/Wave22.pdf> </<<BUILDDIR>>/python-escr
ipt-5.5/debian/tmp3/posix/doc/user/figures/Wave28.pdf> </build/python-escript-r
g4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Wave32.pdf [133] [134]> </build
/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Wa
ve36.pdf>)] [3 [135] [136] [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map] [137]} [4]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/currentdev.tex]
[138] [139] [5 [140]])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/docguide.tex [141] [6] [2] [142] [143] [7] [144] [8]) [145] [3 [146]
Chapter 1.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/intro.tex]

LaTeX Warning: Reference `WAVE FIG 1' on page 27 undefined on input line 365.


LaTeX Warning: Reference `WAVE FIG 1.2' on page 27 undefined on input line 366.



LaTeX Warning: Reference `EXECUTION' on page 27 undefined on input line 369.


LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 396.


LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 398.

) [147] [4]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/hea
tedblock.tex [148] [149]
Underfull \vbox (badness 1655) has occurred while \output is active [27 [5
[150]] [151] [6] </build
/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Wa
vePC.pdf, page is rotated 90 degrees>] [152] [153]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/intro.tex [154] [155

LaTeX Warning: Citation `ESCRIPT' on page 7 undefined on input line 26.


LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 7 undefined on input line 27.



LaTeX Warning: Reference `part1' on page 7 undefined on input line 30.


LaTeX Warning: Reference `part2' on page 7 undefined on input line 38.

)] [156]

LaTeX Warning: Reference `CHAP HEAT DIFF' on page 9 undefined on input line 77.



LaTeX Warning: Reference `CHAP HEAT 2a' on page 9 undefined on input line 78.


LaTeX Warning: Reference `CHAP HEAT 2' on page 9 undefined on input line 78.

[9 [157] [158] [7 [159] [160]] [161] [8
[162]]

LaTeX Warning: Reference `HEATEDBLOCK general problem' on page 28 undefined on 
input line 31.


LaTeX Warning: Reference `WAVE general problem' on page 28 undefined on input l
ine 31.


LaTeX Warning: Reference `WAVE CHAP' on page 28 undefined on input line 32.


LaTeX Warning: Reference `WAVE stress' on page 28 undefined on input line 34.


LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i
nput line 35.


LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i
nput line 58.


LaTeX Warning: Reference `LINEARPDE.SYSTEM.1' on page 28 undefined on input lin
e 67.


LaTeX Warning: Reference `LINEARPDE.SYSTEM.1 TUTORIAL' on page 28 undefined on 
input line 77.


LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i
nput line 96.


LaTeX Warning: Reference `LINEARPDE.SYSTEM.1 TUTORIAL' on page 28 undefined on 
input line 99.

[28 [163] [164]]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/quickstart.tex [165] [9 [166])]]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/escpybas.tex [167] [10] [168] [169]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookGravity.tex [171] [172] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [173] [174]
[175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf
 Ok [48] [49] [50])) [51]
[10 [52] [53] [54]] [55] [56] [57])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf
 Ok [185]
Chapter 2.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example01.tex [178]
Chapter 1.

LaTeX Warning: Reference `part2' on page 11 undefined on input line 12.


LaTeX Warning: Reference `Chp:cook:magnetic inversion' on page 11 undefined on 
input line 32.


LaTeX Warning: Reference `Chp:cook:joint inversion' on page 11 undefined on inp
ut line 32.


Underfull \hbox (badness 10000) in paragraph at lines 54--54
[]\OT1/ptm/m/n/10 Figure 1.1: Grav-ity Anomaly Data in $\OML/cmm/m/it/10 mgal$ 
\OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file

Underfull \hbox (badness 10000) in paragraph at lines 65--65
[]\OT1/ptm/m/n/10 Figure 1.2: 3-D con-tour plot of the den-sity dis-tri-bu-tion
 ob-tained by in-ver-sion of file

LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 11 undefined on input line 76
.


LaTeX Warning: Citation `ESCRIPT' on page 11 undefined on input line 77.


LaTeX Warning: Reference `code: gravity1' on page 11 undefined on input line 82
.

[11 [179] [170] [186])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf]
 Ok [188] (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty [189] [190]) ) ) )
Font metrics written on tctt1000.tfm.
Output written on tctt1000.600gf (128 characters, 19540 bytes).
Transcript written on tctt1000.log.


LaTeX Warning: Reference `fig:onedgbmodel' on page 11 undefined on input line 2
0.


Underfull \vbox (badness 2698) has occurred while \output is active [11pdfTeX w
arning (ext4): destination with the same identifier (name{figure.2.1}) has been
 already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.47 \end{equation}
                    </<<PKGBUILDDIR>>/debian/tmp
3/posix/doc/cookbook/figures/onedheatdiff001.pdf>] [29]

LaTeX Warning: Reference `HEATEDBLOCK FIG 2' on page 30 undefined on input line
 179.

)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sto
kesflow.tex

LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 55.


LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 59.


LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 66.


LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 70.


LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 76.


LaTeX Warning: Reference `eqn:Tbeuler' on page 12 undefined on input line 102.


LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 102.


LaTeX Warning: Reference `eqn:beuler' on page 12 undefined on input line 125.


LaTeX Warning: Reference `eqn:hddisc' on page 12 undefined on input line 132.

[12

LaTeX Warning: Reference `GENERAL NAVIER STOKES COM' on page 30 undefined on in
put line 72.


LaTeX Warning: Reference `MODELS CHAPTER' on page 30 undefined on input line 77
.

[30] </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/HeatedBlock.pdf>])

LaTeX Warning: Reference `eqn:commonform nabla' on page 13 undefined on input l
ine 153.


LaTeX Warning: Reference `eqn:hddisc' on page 13 undefined on input line 158.


LaTeX Warning: Reference `eqn:hddisc' on page 13 undefined on input line 159.


LaTeX Warning: Reference `eqn:commonform nabla' on page 13 undefined on input l
ine 165.


LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 171.


LaTeX Warning: Reference `eqn:commonform' on page 13 undefined on input line 17
1.


Underfull \hbox (badness 4353) in paragraph at lines 185--185
[][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able 
at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound
ary _

LaTeX Warning: Reference `Sec:1DHDv0' on page 13 undefined on input line 191.


LaTeX Warning: Reference `NEUMAN 1' on page 13 undefined on input line 217.


LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 220.


LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 221.

[13]mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tctt1000.600pk: successfully generated.


Package rerunfilecheck Warning: File `install.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Warning: There were undefined references.


LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.

 )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/tctt1000.600pk>{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8
r.enc}</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr/s
hare/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb>

LaTeX Warning: Reference `eqn:commonform nabla' on page 14 undefined on input l
ine 235.


LaTeX Warning: Reference `eqn:commonform nabla' on page 14 undefined on input l
ine 245.


LaTeX Warning: Reference `ESCRIPT SET' on page 14 undefined on input line 247.


LaTeX Warning: Reference `eqn:hd' on page 14 undefined on input line 258.


LaTeX Warning: Reference `sec:escpybas' on page 14 undefined on input line 261.



LaTeX Warning: Reference `sec:key' on page 14 undefined on input line 261.


LaTeX Warning: Reference `fig:wf' on page 14 undefined on input line 268.

[14</usr/share/t
exlive/texmf-dist/fonts/type1/urw/courier/ucrr8a.pfbpdfTeX warning (ext4): destination with the same identifier (name{figure.2.2
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.313 T
       here are various ways to construct domain objects. The simplest form ...
 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookboo
k/figures/workflow.png [12></usr/share/texlive/texmf-
dist/fonts/type1/urw/courier/ucrro8a.pfb </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figu
res/QLDWestGravityDataPlot.png></usr/share/texlive/texmf-dist/fonts/t
ype1/urw/helvetic/uhvb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/hel
vetic/uhvr8a.pfb

LaTeX Warning: Citation `LBB' on page 31 undefined on input line 106.

[31></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvro8
a.pfb]></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmb8a.pfb></usr/sha
re/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb></usr/share/texlive/texm
f-dist/fonts/type1/urw/times/utmri8a.pfb>
Output written on install.pdf (24 pages, 150343 bytes).
Transcript written on install.log.
>] [15pdfTeX warning (ext4): destination with the same id
entifier (name{figure.2.3}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.313 T
       here are various ways to construct domain objects. The simplest form ...
 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookboo
k/figures/functionspace.pdf>]cd debian/tmp3/posix/doc/install && bibtex install


LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 317.


LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 333.


LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 354.


LaTeX Warning: Reference `STEADY-STATE HEAT REFRACTION' on page 16 undefined on
 input line 383.


LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l
ine 389.


LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l
ine 391.


LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l
ine 394.


LaTeX Warning: Reference `eqn:commonform2D' on page 16 undefined on input line 
406.


LaTeX Warning: Reference `eqn:commonform' on page 16 undefined on input line 40
7.

[16]

LaTeX Warning: Reference `eqn:hdgenf' on page 17 undefined on input line 420.

(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty

LaTeX Warning: Reference `FLUID OUTPUT' on page 32 undefined on input line 218.


)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sli
p.tex

LaTeX Warning: Reference `fig:slip.1' on page 32 undefined on input line 28.

[32]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: install.aux
A level-1 auxiliary file: intro.aux
A level-1 auxiliary file: flatpak.aux
A level-1 auxiliary file: conda.aux
A level-1 auxiliary file: docker.aux
A level-1 auxiliary file: source.aux
A level-1 auxiliary file: cxx11.aux
A level-1 auxiliary file: trilinos.aux
I found no \citation commands---while reading file install.aux
I found no \bibdata command---while reading file install.aux
I found no \bibstyle command---while reading file install.aux
(There were 3 error messages)
bibtex returned an error, check the blg file


LaTeX Warning: Reference `ELASTIC CHAP' on page 33 undefined on input line 50.


LaTeX Warning: Reference `Slip stress' on page 33 undefined on input line 63.

[33cd debian/tmp3/posix/doc/install && bibtex intro
 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/stokes-fluid-t01.pdf> </<<PKGBUILDDIR>>
/debian/tmp3/posix/doc/user/figures/stokes-fluid-t10.pdf> </build/python-escrip
t-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/stokes-fluid-t20
.pdf> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/us
er/figures/stokes-fluid-t30.pdf> </<<BUILDDIR>>/python-escript-5
.5/debian/tmp3/posix/doc/user/figures/stokes-fluid-t40.pdf> </build/python-escr
ipt-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/stokes-fluid-t
50.pdf>])This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: intro.aux
I found no \citation commands---while reading file intro.aux
I found no \bibdata command---while reading file intro.aux
I found no \bibstyle command---while reading file intro.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/install && bibtex flatpak


LaTeX Warning: Reference `Slip stress split' on page 34 undefined on input line
 85.


LaTeX Warning: Reference `Slip general problem' on page 34 undefined on input l
ine 85.


LaTeX Warning: Reference `Slip stress split 1' on page 34 undefined on input li
ne 90.


LaTeX Warning: Reference `Slip constraint' on page 34 undefined on input line 9
2.


LaTeX Warning: Reference `Slip natural fault' on page 34 undefined on input lin
e 92.


LaTeX Warning: Reference `ELASTIC CHAP' on page 34 undefined on input line 94.


LaTeX Warning: Reference `Fault System' on page 34 undefined on input line 97.

[34 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/Slip1.pdf>]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: flatpak.aux
I found no \citation commands---while reading file flatpak.aux
I found no \bibdata command---while reading file flatpak.aux
I found no \bibstyle command---while reading file flatpak.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/install && bibtex conda

Underfull \hbox (badness 10000) in paragraph at lines 415--425

[17]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: conda.aux
I found no \citation commands---while reading file conda.aux
I found no \bibdata command---while reading file conda.aux
I found no \bibstyle command---while reading file conda.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
>]cd debian/tmp3/posix/doc/install && bibtex docker
 [13 </<<BUILDDIR>>/python-escri
pt-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravContourMu10.png (PNG copy
)>] [35]

LaTeX Warning: Citation `ESCRIPT' on page 14 undefined on input line 138.


LaTeX Warning: Reference `FIG:P1:GRAV:1' on page 14 undefined on input line 152
.


LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 14 undefined on input line 154
.


LaTeX Warning: Reference `SEC:P1:GRAV:DATA' on page 14 undefined on input line 
155.


LaTeX Warning: Reference `code: gravity1' on page 14 undefined on input line 18
5.


LaTeX Warning: Reference `FIG:P1:GRAV:2' on page 14 undefined on input line 188
.


LaTeX Warning: Reference `fig:domainBuilder' on page 14 undefined on input line
 189.


LaTeX Warning: Reference `FIG:P1:GRAV:3' on page 14 undefined on input line 217
.


LaTeX Warning: Reference `sec:forward gravity' on page 14 undefined on input li
ne 226.

[14This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: docker.aux
I found no \citation commands---while reading file docker.aux
I found no \bibdata command---while reading file docker.aux
I found no \bibstyle command---while reading file docker.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
]

LaTeX Warning: Reference `fig:slip.2' on page 36 undefined on input line 190.

)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dir
ac.texcd debian/tmp3/posix/doc/install && bibtex source
 [15 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/inversion/figures/dom2D.pdf> </<<PKGBUILDDIR>>/
debian/tmp3/posix/doc/inversion/figures/dom2DFEM.pdf

pdfTeX warning: pdflatex (file /<<PKGBUILDDIR>>/
debian/tmp3/posix/doc/inversion/figures/dom2DFEM.pdf): PDF inclusion: multiple 
pdfs with page group included in a single page
>]

LaTeX Warning: Reference `code: gravity1' on page 16 undefined on input line 23
5.


LaTeX Warning: Citation `ESCRIPT' on page 16 undefined on input line 278.


LaTeX Warning: Citation `ESCRIPTONLINE' on page 16 undefined on input line 278.



LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 282.

(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)

LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 290.


LaTeX Warning: Reference `FIG:P1:GRAV:2' on page 16 undefined on input line 294
.


LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 16 undefined on input line 299
.

[16]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: source.aux
I found no \citation commands---while reading file source.aux
I found no \bibdata command---while reading file source.aux
I found no \bibstyle command---while reading file source.aux
(There were 3 error messages)


LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:DATAHOLES' on page 17 undefined on
 input line 324.


LaTeX Warning: Citation `ERMAPPER' on page 17 undefined on input line 327.


LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 327.


LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:ERMAPPER' on page 17 undefined on 
input line 329.


LaTeX Warning: Reference `sec:ref:DataSource:ERM' on page 17 undefined on input
 line 330.


LaTeX Warning: Reference `Chp:ref:data sources' on page 17 undefined on input l
ine 333.


LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 336.


LaTeX Warning: Reference `code: gravity1' on page 17 undefined on input line 33
9.


LaTeX Warning: Reference `sec:ref:DataSource' on page 17 undefined on input lin
e 359.


LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:MULTIDATA' on page 17 undefined on
 input line 416.

[17bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/install && bibtex cxx11
]

LaTeX Warning: Reference `EX:DIRAC1' on page 36 undefined on input line 47.

[36 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/Slip2.png

LaTeX Warning: Reference `code: gravity1' on page 18 undefined on input line 42
3.


LaTeX Warning: Reference `part2' on page 18 undefined on input line 433.


LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:REG' on page 18 undefined on input
 line 470.

[18]

LaTeX Warning: Reference `ss:domcon' on page 18 undefined on input line 508.

[18]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: cxx11.aux
I found no \citation commands---while reading file cxx11.aux
I found no \bibdata command---while reading file cxx11.aux
I found no \bibstyle command---while reading file cxx11.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/install && bibtex trilinos


LaTeX Warning: Reference `code: gravity1' on page 19 undefined on input line 50
1.


LaTeX Warning: Citation `VISIT' on page 19 undefined on input line 504.


LaTeX Warning: Citation `mayavi' on page 19 undefined on input line 504.


LaTeX Warning: Citation `SILO' on page 19 undefined on input line 516.


LaTeX Warning: Citation `VISIT' on page 19 undefined on input line 517.


LaTeX Warning: Citation `GOCAD' on page 19 undefined on input line 529.


LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 19 undefined on input line 564
.


LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 19 undefined on input line 564
.


LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 19 undefined on input line 594
.


LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 19 undefined on input line 594
.


LaTeX Warning: Reference `FIG:P1:GRAV:10' on page 19 undefined on input line 59
9.


LaTeX Warning: Reference `FIG:P1:GRAV:11' on page 19 undefined on input line 59
9.


LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 19 undefined on input line 601
.


LaTeX Warning: Citation `ESCRIPT' on page 19 undefined on input line 631.

[19] [20 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/inversion/figures/QLDGravContourMu01.png (PNG copy)> </build/python-escript-rg
4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravContourM
u1.png (PNG copy)> </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/inversion/figures/QLDGravContourMu100.png (PNG copy)> </build/python
-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDG
ravContourMu1000.png (PNG copy)>] [21 </<<BUILDDIR>>/python-escr
ipt-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepthMu01.png (PNG copy)
> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/invers
ion/figures/QLDGravDepthMu1.png (PNG copy)> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepthMu10.png (PNG
 copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/
inversion/figures/QLDGravDepthMu100.png (PNG copy)> </build/python-escript-rg4I
yW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepthMu100
0.png (PNG copy)>]
Underfull \hbox (badness 10000) in paragraph at lines 604--605


Underfull \hbox (badness 10000) in paragraph at lines 604--605


LaTeX Warning: Reference `Sec:2DHD' on page 19 undefined on input line 617.

[19This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: trilinos.aux
I found no \citation commands---while reading file trilinos.aux
I found no \bibdata command---while reading file trilinos.aux
I found no \bibstyle command---while reading file trilinos.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/install && makeindex install.idx
]

LaTeX Warning: Reference `SEC:P1:GRAV:DATA' on page 22 undefined on input line 
647.


LaTeX Warning: Reference `SEC:P1:GRAV:DATA' on page 22 undefined on input line 
664.


LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:DATAHOLES' on page 22 undefined on
 input line 665.


LaTeX Warning: Reference `FIG:P1:GRAV:onshoreoffshore' on page 22 undefined on 
input line 674.


LaTeX Warning: Reference `FIG:P1:GRAV:onshoreoffshore' on page 22 undefined on 
input line 680.

[22 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inve
rsion/figures/onshore-offshore.pngThis is makeindex, version 2.15 [TeX Live 2019] (kpathsea + Thai support).
Scanning input file install.idx...done (0 entries accepted, 0 rejected).
Nothing written in install.ind.
Transcript written in install.ilg.
cd debian/tmp3/posix/doc/install && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{install.tex} install.tex


LaTeX Warning: Reference `fig:onedheatout1' on page 20 undefined on input line 
671.

[20This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
pdfTeX warning (ext4): destination with the same identifier (name{figure.2.4
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.680 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ttblockspyplot150.pngentering extended mode
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
install.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
esysdoc.cls
Document Class: esysdoc 
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))

Package geometry Warning: Over-specification in `h'-direction.
    `width' (478.00812pt) is ignored.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty>]
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty>])
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)

LaTeX Warning: Reference `part2' on page 23 undefined on input line 751.

)) [23
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)]
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookMagnetic.tex) [24
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty]
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)
Underfull \hbox (badness 10000) in paragraph at lines 684--692


LaTeX Warning: Float too large for page by 10.55325pt on input line 775.

[21)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)]
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty [22pdfTeX warning (ext4): destination with the same identifier (name{figur
e.2.5}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.776 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/blockspyplot001.png))
Chapter 2.

Underfull \hbox (badness 10000) in paragraph at lines 7--7
[]\OT1/ptm/m/n/10 Figure 2.1: Mag-netic anomaly data in $\OML/cmm/m/it/10 nT$ \
OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file

LaTeX Warning: Reference `FIG:P1:MAG:0' on page 25 undefined on input line 15.


LaTeX Warning: Reference `code: magnetic1' on page 25 undefined on input line 1
9.


LaTeX Warning: Reference `code: gravity1' on page 25 undefined on input line 20
.


LaTeX Warning: Reference `FIG:P1:MAG:1' on page 25 undefined on input line 76.

[25
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty] [26 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/inversion/figures/QLDWestMagneticDataPlot.png)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty)
(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)> </<<BUILDDIR>>/py
thon-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/blockspyplot050.png
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)> </
<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook/f
igures/blockspyplot200.png
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty> </<<BUILDDIR>>/p
ython-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagContourMu01.png
 (PNG copy)>]
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
install_defs.tex (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
elist.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty
Package `listing', V1.2, <1999/05/25>
)

LaTeX Warning: Citation `IGRF' on page 27 undefined on input line 96.


LaTeX Warning: Citation `AGRF' on page 27 undefined on input line 97.


LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 163.



LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 163.



LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 192.



LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 192.



LaTeX Warning: Reference `FIG:P1:MAG:10' on page 27 undefined on input line 196
.


LaTeX Warning: Reference `FIG:P1:MAG:11' on page 27 undefined on input line 196
.


LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 197.



LaTeX Warning: Reference `FIG:P1:MAG:10' on page 27 undefined on input line 198
.


LaTeX Warning: Reference `FIG:P1:MAG:11' on page 27 undefined on input line 199
.

))) [27 (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty])) [28 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/inversion/figures/QLDMagContourMu0001.png (PNG copy)
(/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty> </build/python-escript
-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagContou
rMu001.png (PNG copy)
Excluding comment 'comment')> </<<PKGBUILDDIR>>/debian/
tmp3/posix/doc/inversion/figures/QLDMagContourMu1.png (PNG copy)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
verinfo.tex)> </build/pytho
n-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLD
MagContourMu10.png (PNG copy)>] [29
Writing index file install.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def </<<BUILDDIR>>/python-escrip
t-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagDepthMu0001.png (PNG copy)>
 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversi
on/figures/QLDMagDepthMu001.png (PNG copy)> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagDepthMu01.png (PNG 
copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/i
nversion/figures/QLDMagDepthMu1.png (PNG copy)> </<<BUILDDIR>>/p
ython-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagDepthMu10.png (
PNG copy)>])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookJointDUMMY.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
install.aux [30]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
intro.aux)
Chapter 3.
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
flatpak.aux) [31]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
conda.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookDcRes.tex)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
docker.aux

LaTeX Warning: Label `chap:flatpak' multiply defined.

) [32]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
source.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
cxx11.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
trilinos.aux)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)>]>]
Chapter 4.

LaTeX Warning: Citation `LOKE2014' on page 33 undefined on input line 30.


LaTeX Warning: Reference `sec:forward DCRES' on page 33 undefined on input line
 35.


LaTeX Warning: Reference `fig:HalfSphere' on page 33 undefined on input line 39
.

[33]

LaTeX Warning: Reference `FIG:EX:DIRAC' on page 37 undefined on input line 75.

)) [37 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/u
ser/figures/diracplot.png
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty) [34) </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/inversion/figures/HalfSphere.png
Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][]
[][][][][][][][][][][][][][][][][][][][][][][][][] 

LaTeX Warning: Reference `fig:onedheatout' on page 23 undefined on input line 8
12.

)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example02.tex
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)
Underfull \hbox (badness 10000) in paragraph at lines 17--19


LaTeX Warning: Reference `fig:onedhdmodel' on page 23 undefined on input line 2
1.


LaTeX Warning: Reference `Sec:1DHDv00' on page 23 undefined on input line 34.

[23 [1]{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
docguide.tex) [2]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
install.toc) [3]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
intro.tex [4]
Chapter 1.
) [5]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
flatpak.tex [6]
Chapter 2.
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty

LaTeX Warning: Reference `eqn:hddisc' on page 24 undefined on input line 71.


LaTeX Warning: Reference `SEC BOUNDARY COND' on page 24 undefined on input line
 73.

[24pdfTeX warning (ext4): destination with the same identifier (name{figure.2.6
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.110 I
       t is important to remark here that if a Dirichlet boundary condition is 
</<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/figures/onedheatdiff002.pdf>]

LaTeX Warning: Reference `fig:onedheatout1 002' on page 25 undefined on input l
ine 116.


LaTeX Warning: Reference `fig:onedheatout 002' on page 25 undefined on input li
ne 119.


LaTeX Warning: Float too large for page by 10.55325pt on input line 146.

) [25pdfTeX warning (ext4): destination with the same identifier (name{figure.2
.7}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.108 \chapter
              {Heat Diffusion in Two Dimensions} </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ttrodpyplot150.png)
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty>]) [35] [36] [37] [38]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/IntroPart2.tex)
Chapter 5.

LaTeX Warning: Reference `Chp:ref:regularization' on page 39 undefined on input
 line 7.


LaTeX Warning: Reference `Chp:ref:mapping' on page 39 undefined on input line 1
0.


LaTeX Warning: Reference `Chp:ref:forward models' on page 39 undefined on input
 line 13.


LaTeX Warning: Reference `Chp:ref:mapping' on page 39 undefined on input line 4
6.


LaTeX Warning: Citation `ESCRIPT' on page 39 undefined on input line 54.


LaTeX Warning: Reference `Chp:ref:domain builder' on page 39 undefined on input
 line 55.


LaTeX Warning: Reference `fig:cartesianDomain' on page 39 undefined on input li
ne 58.


LaTeX Warning: Reference `part1' on page 39 undefined on input line 71.


LaTeX Warning: Reference `chapter:ref:Drivers:Drivers' on page 39 undefined on 
input line 72.

[39]

LaTeX Warning: Reference `fig:classes' on page 40 undefined on input line 75.


LaTeX Warning: Reference `Chp:ref:data sources' on page 40 undefined on input l
ine 76.


LaTeX Warning: Citation `ESCRIPT' on page 40 undefined on input line 79.


LaTeX Warning: Reference `Chp:ref:domain builder' on page 40 undefined on input
 line 79.


LaTeX Warning: Reference `Chp:ref:regularization' on page 40 undefined on input
 line 84.


LaTeX Warning: Reference `Chp:ref:forward models' on page 40 undefined on input
 line 85.


LaTeX Warning: Reference `Chp:ref:mapping' on page 40 undefined on input line 8
6.


LaTeX Warning: Reference `chapter:ref:Minimization' on page 40 undefined on inp
ut line 88.


(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Drivers.tex [40 </<<PKGBUILDDIR>>/debian/tmp3/
posix/doc/inversion/figures/classdep.pdf>]) [7]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
conda.tex [8]>]

LaTeX Warning: Reference `chapter:ref:inversion cost function' on page 41 undef
ined on input line 14.


LaTeX Warning: Reference `chapter:ref:Minimization' on page 41 undefined on inp
ut line 19.


LaTeX Warning: Reference `EQU:MIN:3a' on page 41 undefined on input line 35.


LaTeX Warning: Reference `EQU:MIN:3b' on page 41 undefined on input line 37.


LaTeX Warning: Reference `Chp:cook:gravity inversion' on page 41 undefined on i
nput line 58.


LaTeX Warning: Reference `Chp:ref:regularization' on page 41 undefined on input
 line 66.


LaTeX Warning: Reference `Chp:ref:mapping density' on page 41 undefined on inpu
t line 67.


LaTeX Warning: Reference `sec:forward gravity' on page 41 undefined on input li
ne 68.


LaTeX Warning: Reference `chapter:ref:Minimization' on page 41 undefined on inp
ut line 70.


LaTeX Warning: Citation `Nocedal1980' on page 41 undefined on input line 71.


LaTeX Warning: Reference `Chp:ref:domain builder' on page 41 undefined on input
 line 91.


LaTeX Warning: Reference `Chp:ref:mapping density' on page 41 undefined on inpu
t line 97.


LaTeX Warning: Reference `EQU:REG:1' on page 41 undefined on input line 100.


LaTeX Warning: Reference `Chp:ref:domain builder' on page 41 undefined on input
 line 103.

[41
[26pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.108 \chapter
              {Heat Diffusion in Two Dimensions} </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/rodpyplot001.png]
Chapter 3.
) [9]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
docker.tex [10]>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/exe
cute.tex
Chapter 4.
) [38] [11]

LaTeX Warning: Reference `Chp:cook:magnetic inversion' on page 42 undefined on 
input line 111.


LaTeX Warning: Reference `Chp:ref:regularization' on page 42 undefined on input
 line 117.


LaTeX Warning: Reference `Chp:ref:mapping susceptibility' on page 42 undefined 
on input line 118.


LaTeX Warning: Reference `sec:forward self demagnetic' on page 42 undefined on 
input line 120.


LaTeX Warning: Reference `sec:forward magnetic' on page 42 undefined on input l
ine 121.


LaTeX Warning: Reference `chapter:ref:Minimization' on page 42 undefined on inp
ut line 123.


LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 124.


LaTeX Warning: Reference `Chp:ref:domain builder' on page 42 undefined on input
 line 146.


LaTeX Warning: Reference `Chp:ref:mapping susceptibility' on page 42 undefined 
on input line 152.


LaTeX Warning: Reference `EQU:REG:1' on page 42 undefined on input line 155.


LaTeX Warning: Reference `Chp:ref:domain builder' on page 42 undefined on input
 line 158.


LaTeX Warning: Reference `Chp:cook:joint inversion' on page 42 undefined on inp
ut line 166.


LaTeX Warning: Reference `Chp:ref:regularization' on page 42 undefined on input
 line 174.


LaTeX Warning: Reference `Chp:ref:mapping' on page 42 undefined on input line 1
75.


LaTeX Warning: Reference `sec:forward gravity' on page 42 undefined on input li
ne 176.


LaTeX Warning: Reference `sec:forward self demagnetic' on page 42 undefined on 
input line 178.


LaTeX Warning: Reference `sec:forward magnetic' on page 42 undefined on input l
ine 179.


LaTeX Warning: Reference `chapter:ref:Minimization' on page 42 undefined on inp
ut line 181.


LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 182.

[42
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
source.tex [12]]
Chapter 5.
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)

LaTeX Warning: Reference `Chp:ref:domain builder' on page 43 undefined on input
 line 213.


LaTeX Warning: Reference `Chp:ref:mapping density' on page 43 undefined on inpu
t line 219.


LaTeX Warning: Reference `Chp:ref:mapping susceptibility' on page 43 undefined 
on input line 224.


LaTeX Warning: Reference `EQU:REG:1' on page 43 undefined on input line 227.


LaTeX Warning: Reference `Chp:ref:domain builder' on page 43 undefined on input
 line 231.


LaTeX Warning: Reference `Chp:ref:domain builder' on page 43 undefined on input
 line 233.

)
Chapter 2.

LaTeX Warning: Reference `FirstSteps' on page 39 undefined on input line 31.


LaTeX Warning: Citation `OPENMP' on page 39 undefined on input line 46.


LaTeX Warning: Citation `MPI' on page 39 undefined on input line 47.

[39) [13] [43]]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Domains.tex [44] [40]
Chapter 6.

LaTeX Warning: Reference `fig:cartesianDomain' on page 45 undefined on input li
ne 11.


LaTeX Warning: Reference `fig:cartesianDomain' on page 45 undefined on input li
ne 21.


LaTeX Warning: Reference `fig:cartesianDomain' on page 45 undefined on input li
ne 26.


LaTeX Warning: Reference `fig:geodeticDomain' on page 45 undefined on input lin
e 46.


LaTeX Warning: Citation `Featherstone2008a' on page 45 undefined on input line 
48.


LaTeX Warning: Reference `REF:FIG:REF:10' on page 45 undefined on input line 79
.

[45 [14]> </b
uild/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/fi
gures/rodpyplot050.png] [46 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/inversion/figures/cartesian.pdf>]) [41] [47 [42] </<<BUILDDIR>>/python-esc
ript-5.5/debian/tmp3/posix/doc/inversion/figures/geosphir.png
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esc
ript.tex
Chapter 3.
[43]

LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 79
.


LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 79
.


Underfull \hbox (badness 1648) in paragraph at lines 79--79
[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac
es in []. An ar-row in-di-cates that a func-tion in the

LaTeX Warning: Citation `LBB' on page 44 undefined on input line 83.


LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 88.


LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 107.


LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 119.


LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 12
1.

[44 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/EscriptDiagram1.pdf>]> </<<PKGBUILDDIR>>/debian
/tmp3/posix/doc/cookbook/figures/rodpyplot200.png
Underfull \hbox (badness 10000) in paragraph at lines 152--153


Underfull \hbox (badness 10000) in paragraph at lines 195--196

[15]

LaTeX Warning: Citation `NUMPY' on page 45 undefined on input line 150.

[45]>]

LaTeX Warning: Reference `equ:ref:coordinates:100' on page 48 undefined on inpu
t line 211.


LaTeX Warning: Reference `REF:FIG:REF:10' on page 48 undefined on input line 25
1.


LaTeX Warning: Reference `REF:FIG:REF:10' on page 48 undefined on input line 25
5.


Underfull \hbox (badness 10000) in paragraph at lines 261--261
[][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t
ion can be sup-ported by build-ing sub-classes of the
[48]>]
Chapter 3.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example03.tex
Overfull \hbox (19.96072pt too wide) in paragraph at lines 266--267
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 
[16]

LaTeX Warning: Reference `ESCRIPT DEP' on page 46 undefined on input line 245.


LaTeX Warning: Reference `Figure: tag' on page 46 undefined on input line 265.


LaTeX Warning: Reference `Figure: tag' on page 46 undefined on input line 276.

[46] [49]) [50]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Minimization.tex
Underfull \hbox (badness 10000) in paragraph at lines 22--23


Underfull \hbox (badness 10000) in paragraph at lines 22--23


LaTeX Warning: Reference `fig:twodhdmodel' on page 27 undefined on input line 3
0.


LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 32.


LaTeX Warning: Reference `fig:twodhdmodel' on page 27 undefined on input line 4
6.


LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 66.


LaTeX Warning: Reference `eqn:hd' on page 27 undefined on input line 72.


LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 73.

[27]

LaTeX Warning: Citation `NETCDF' on page 47 undefined on input line 318.

[47
Chapter 7.

LaTeX Warning: Reference `REF:EQU:INTRO 1' on page 51 undefined on input line 1
8.


LaTeX Warning: Citation `Nocedal1980' on page 51 undefined on input line 40.


LaTeX Warning: Reference `EQU:MIN:2' on page 51 undefined on input line 67.


LaTeX Warning: Reference `Chp:ref:regularization' on page 51 undefined on input
 line 68.

[51 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/EscriptDiagram2.pdf>]]

LaTeX Warning: Reference `eqn:commonform nabla' on page 28 undefined on input l
ine 87.


LaTeX Warning: Reference `eqn:hdgenf' on page 28 undefined on input line 98.


LaTeX Warning: Reference `eqn:commonform2D' on page 28 undefined on input line 
102.


LaTeX Warning: Reference `ESCRIPT SET' on page 28 undefined on input line 113.


LaTeX Warning: Reference `eqn: kappa general' on page 28 undefined on input lin
e 125.

[28pdfTeX warning (ext4): destination with the same identifier (name{figure.3.1
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.141 \begin{python}
                     </<<PKGBUILDDIR>>/debian/tm
p3/posix/doc/cookbook/figures/twodheatdiff.pdf>] Excluding 'comment' comment. [17

LaTeX Warning: Reference `chapter:ref:Minimization: costfunction class' on page
 52 undefined on input line 96.


LaTeX Warning: Reference `EQU:MIN:3a' on page 52 undefined on input line 106.


LaTeX Warning: Reference `EQU:MIN:3b' on page 52 undefined on input line 108.


LaTeX Warning: Reference `EQU:MIN:3a' on page 52 undefined on input line 110.


LaTeX Warning: Reference `EQU:MIN:3b' on page 52 undefined on input line 111.

[52]]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)

LaTeX Warning: Citation `Nocedal1980' on page 53 undefined on input line 215.

(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsptm.fd) [18

LaTeX Warning: Reference `sec:datamanager' on page 48 undefined on input line 3
68.

[48]])

LaTeX Warning: Reference `sec:LineSearch' on page 53 undefined on input line 22
6.

[53 [19]]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
cxx11.tex [20]
Appendix A.
) [21] [49

LaTeX Warning: Citation `Nocedal2006' on page 54 undefined on input line 256.


LaTeX Warning: Citation `MoreThuente1992' on page 54 undefined on input line 25
7.

)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
trilinos.tex] [22] [54]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CostFunctions.tex
Appendix B.
[23

LaTeX Warning: Reference `eqn: kappa general' on page 29 undefined on input lin
e 144.


LaTeX Warning: Reference `NEUMAN 2' on page 29 undefined on input line 147.


LaTeX Warning: Reference `Sec:1DHDv00' on page 29 undefined on input line 169.


LaTeX Warning: Float too large for page by 12.55325pt on input line 232.

[29]
Chapter 8.

LaTeX Warning: Reference `chapter:ref:Drivers' on page 55 undefined on input li
ne 2.


LaTeX Warning: Reference `Chp:ref:regularization' on page 55 undefined on input
 line 6.


LaTeX Warning: Reference `Chp:ref:forward models' on page 55 undefined on input
 line 7.


LaTeX Warning: Reference `chapter:ref:Minimization' on page 55 undefined on inp
ut line 12.

[55 [50 (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd)]]]) [24]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
install.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
intro.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
flatpak.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
conda.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
docker.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
source.aux)

LaTeX Warning: Reference `chapter:ref:Minimization: costfunction class' on page
 56 undefined on input line 61.


LaTeX Warning: Reference `Chp:ref:regularization' on page 56 undefined on input
 line 65.


LaTeX Warning: Reference `Chp:ref:mapping' on page 56 undefined on input line 6
7.


LaTeX Warning: Reference `Chp:ref:forward models' on page 56 undefined on input
 line 72.


LaTeX Warning: Reference `sec:ref:reference systems' on page 56 undefined on in
put line 79.


LaTeX Warning: Citation `ESCRIPT' on page 56 undefined on input line 83.


LaTeX Warning: Reference `REF:EQU:DRIVE:10' on page 56 undefined on input line 
90.


LaTeX Warning: Reference `Chp:ref:regularization' on page 56 undefined on input
 line 99.


LaTeX Warning: Reference `Chp:ref:regularization' on page 56 undefined on input
 line 121.

[56
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
cxx11.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
trilinos.aux))

Package rerunfilecheck Warning: File `install.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Warning: There were multiply-defined labels.

 )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/tctt1000.600pk>{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8
r.enc}]</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr/s
hare/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/urw/courier/ucrr8a.pfb></usr/share/texlive/texmf-
dist/fonts/type1/urw/courier/ucrro8a.pfb

LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page
 57 undefined on input line 181.


LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page
 57 undefined on input line 186.

[57 [51></usr/share/texlive/texmf-dist/fonts/t
ype1/urw/helvetic/uhvb8a.pfb]]></usr/share/texlive/texmf-dist/fonts/type1/urw/hel
vetic/uhvr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvro8
a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmb8a.pfb>

LaTeX Warning: Reference `chapter:ref:Minimization' on page 58 undefined on inp
ut line 220.


LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page
 58 undefined on input line 246.


LaTeX Warning: Reference `REF:EQU:INTRO 2b' on page 58 undefined on input line 
247.

[58</usr/sha
re/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb]></usr/share/texlive/texm
f-dist/fonts/type1/urw/times/utmri8a.pfb

LaTeX Warning: Reference `sec: plot T' on page 30 undefined on input line 243.

(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)>
Output written on install.pdf (24 pages, 153047 bytes).
Transcript written on install.log.


LaTeX Warning: Reference `REF:EQU:costfunction 100b' on page 59 undefined on in
put line 281.


LaTeX Warning: Reference `REF:EQU:costfunction 100' on page 59 undefined on inp
ut line 332.


LaTeX Warning: Reference `REF:EQU:costfunction 100d' on page 59 undefined on in
put line 334.


LaTeX Warning: Reference `REF:EQU:costfunction 100b' on page 59 undefined on in
put line 335.


LaTeX Warning: Reference `REF:EQU:costfunction 100d' on page 59 undefined on in
put line 344.

[59]) [60]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/DataSources.tex [52Install file: "debian/tmp3/posix/doc/install/install.pdf" as "debian/stage3/release/doc/install/install.r-2.pdf"
]
Chapter 9.

LaTeX Warning: Reference `fig:domainBuilder' on page 61 undefined on input line
 19.

[61 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inve
rsion/figures/domainbuilder.pdf>]
Overfull \hbox (46.961pt too wide) in paragraph at lines 286--287
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 


LaTeX Warning: Reference `fig:twodhdans' on page 30 undefined on input line 301
.


Underfull \hbox (badness 10000) in paragraph at lines 306--311

[30cd /<<PKGBUILDDIR>>/doc && tar -cf /<<PKGBUILDDIR>>/debian/stage3/release/doc/escript_examples.tar examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/trapezoid.py examples/usersguide/quad.py examples/usersguide/brick.py examples/usersguide/refine.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example04a.py examples/cookbook/example04b.py examples/cookbook/example05a.py examples/cookbook/example05b.py examples/cookbook/example05c.py examples/cookbook/example06.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example08c.py examples/cookbook/example09m.py examples/cookbook/example09a.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example10m.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/inversion/dc_forward.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh
]

LaTeX Warning: Reference `sec:ref:reference systems' on page 62 undefined on in
put line 44.


LaTeX Warning: Reference `sec:ref:reference systems' on page 62 undefined on in
put line 53.


LaTeX Warning: Reference `fig:cartesianDomain' on page 62 undefined on input li
ne 62.


LaTeX Warning: Reference `fig:cartesianDomain' on page 62 undefined on input li
ne 65.

[62]gzip -n -9 /<<PKGBUILDDIR>>/debian/stage3/release/doc/escript_examples.tar

Underfull \vbox (badness 1348) has occurred while \output is active [53

LaTeX Warning: Citation `ESCRIPT' on page 63 undefined on input line 158.


LaTeX Warning: Reference `sec:ref:reference systems' on page 63 undefined on in
put line 204.

[63]]

LaTeX Warning: Citation `ERMAPPER' on page 64 undefined on input line 277.

[64

LaTeX Warning: Reference `fig:mayavi window' on page 31 undefined on input line
 360.


LaTeX Warning: Reference `fig:mayavi window2' on page 31 undefined on input lin
e 365.

)] [31] [32pdfTeX warning (ext4): destination with the same identifier (name{fig
ure.3.2}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.112 \chapter
              {Complex Geometries} </<<BUILDDIR>>/python-escript
-5.5/debian/tmp3/posix/doc/cookbook/figures/heatrefraction001.png

LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:DATAHOLES' on page 65 undefined on
 input line 309.


LaTeX Warning: Reference `sec:ref:reference systems' on page 65 undefined on in
put line 311.


LaTeX Warning: Citation `NETCDF' on page 65 undefined on input line 318.


LaTeX Warning: Citation `matplotlib' on page 65 undefined on input line 328.


LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:DATAHOLES' on page 65 undefined on
 input line 358.


LaTeX Warning: Reference `sec:ref:reference systems' on page 65 undefined on in
put line 359.

[65]

LaTeX Warning: Reference `eq:synthdata' on page 66 undefined on input line 430.


) [66

LaTeX Warning: Reference `chap:ripley' on page 54 undefined on input line 880.


LaTeX Warning: Citation `gaussfilter' on page 54 undefined on input line 909.

[54]]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Regularization.tex
Chapter 10.

LaTeX Warning: Citation `GALLARDO2005a' on page 67 undefined on input line 28.

[67] [55]

LaTeX Warning: Reference `ref:EQU:REG:7' on page 68 undefined on input line 96.



LaTeX Warning: Reference `ref:EQU:REG:5' on page 68 undefined on input line 98.



LaTeX Warning: Reference `ref:EQU:REG:6' on page 68 undefined on input line 99.



LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page
 68 undefined on input line 147.

[68]) [69] [56
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Mapping.tex [70]]> </build/pyth
on-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/hea
trefraction030.png
Chapter 11.

LaTeX Warning: Reference `Chp:ref:regularization' on page 71 undefined on input
 line 3.

[71]) [57 [72]]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardModels.tex
Chapter 12.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardGravity.tex

LaTeX Warning: Reference `ref:GRAV:EQU:101' on page 73 undefined on input line 
37.


LaTeX Warning: Reference `chapter:ref:inversion cost function' on page 73 undef
ined on input line 41.


LaTeX Warning: Reference `ref:EQU:REG:6b' on page 73 undefined on input line 70
.


LaTeX Warning: Reference `Chp:ref:coordinates' on page 73 undefined on input li
ne 88.


LaTeX Warning: Reference `ref:GRAV:EQU:100' on page 73 undefined on input line 
89.

[73] [58]

LaTeX Warning: Reference `ref:GRAV:EQU:12' on page 74 undefined on input line 9
9.


LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page
 74 undefined on input line 109.


LaTeX Warning: Reference `ref:GRAV:EQU:100' on page 74 undefined on input line 
110.


LaTeX Warning: Reference `ref:GRAV:EQU:201' on page 74 undefined on input line 
117.


LaTeX Warning: Reference `ref:GRAV:EQU:201' on page 74 undefined on input line 
143.


LaTeX Warning: Reference `Chp:ref:coordinates' on page 74 undefined on input li
ne 162.


LaTeX Warning: Reference `ref:GRAV:EQU:9' on page 74 undefined on input line 16
4.

[74] [59

LaTeX Warning: Reference `ref:GRAV:EQU:10' on page 75 undefined on input line 1
70.


LaTeX Warning: Reference `ref:GRAV:EQU:201' on page 75 undefined on input line 
194.

)]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardMagnetic.tex [60

LaTeX Warning: Citation `IGRF' on page 75 undefined on input line 34.


LaTeX Warning: Citation `AGRF' on page 75 undefined on input line 35.


LaTeX Warning: Reference `ref:MAG:EQU:1' on page 75 undefined on input line 45.



LaTeX Warning: Reference `ref:MAG:EQU:4' on page 75 undefined on input line 45.



LaTeX Warning: Reference `ref:MAG:EQU:8' on page 75 undefined on input line 61.



LaTeX Warning: Reference `chapter:ref:inversion cost function' on page 75 undef
ined on input line 65.

[75]]

LaTeX Warning: Reference `ref:EQU:REG:6b' on page 76 undefined on input line 10
1.


LaTeX Warning: Reference `ref:MAG:EQU:8' on page 76 undefined on input line 119
.


LaTeX Warning: Reference `ref:MAG:EQU:12' on page 76 undefined on input line 12
9.


LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page
 76 undefined on input line 139.


LaTeX Warning: Reference `ref:MAG:EQU:8' on page 76 undefined on input line 141
.


LaTeX Warning: Reference `ref:MAG:EQU:201' on page 76 undefined on input line 1
47.

[76> </<<PKGBUILDDIR>>/debian/tmp
3/posix/doc/cookbook/figures/heatrefraction200.png]

LaTeX Warning: Reference `ref:MAG:EQU:201' on page 77 undefined on input line 1
73.


LaTeX Warning: Reference `Chp:ref:coordinates' on page 77 undefined on input li
ne 192.


LaTeX Warning: Reference `ref:MAG:EQU:9' on page 77 undefined on input line 194
.


LaTeX Warning: Reference `ref:MAG:EQU:10' on page 77 undefined on input line 20
0.

[77]

LaTeX Warning: Reference `ref:MAG:EQU:201' on page 78 undefined on input line 2
32.

)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardMagneticIntensity.tex [61]

LaTeX Warning: Reference `sec:forward magnetic' on page 78 undefined on input l
ine 28.


LaTeX Warning: Reference `chapter:ref:inversion cost function' on page 78 undef
ined on input line 44.


LaTeX Warning: Reference `ref:EQU:REG:6b' on page 78 undefined on input line 79
.

[78]

LaTeX Warning: Reference `ref:MAG:EQU:8' on page 79 undefined on input line 97.



LaTeX Warning: Reference `ref:IMAG:EQU:12' on page 79 undefined on input line 1
07.


LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page
 79 undefined on input line 117.


LaTeX Warning: Reference `ref:MAG:EQU:8' on page 79 undefined on input line 119
.


LaTeX Warning: Reference `ref:MAG:EQU:201' on page 79 undefined on input line 1
25.


LaTeX Warning: Reference `ref:IMAG:EQU:201' on page 79 undefined on input line 
153.

)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardSelfMagnetic.tex [79]

LaTeX Warning: Reference `sec:forward magnetic' on page 80 undefined on input l
ine 18.


LaTeX Warning: Citation `Lelievre2006a' on page 80 undefined on input line 21.


LaTeX Warning: Reference `ref:MAG:EQU:1' on page 80 undefined on input line 23.



LaTeX Warning: Reference `ref:MAG:EQU:4' on page 80 undefined on input line 29.



LaTeX Warning: Reference `sec:forward magnetic' on page 80 undefined on input l
ine 36.


LaTeX Warning: Reference `ref:SELFREMAG:EQU:1' on page 80 undefined on input li
ne 44.


LaTeX Warning: Reference `ref:SELFREMAG:EQU:4' on page 80 undefined on input li
ne 44.


LaTeX Warning: Reference `ref:SELFREMAG:EQU:8' on page 80 undefined on input li
ne 60.


LaTeX Warning: Reference `chapter:ref:inversion cost function' on page 80 undef
ined on input line 64.


LaTeX Warning: Reference `sec:forward magnetic' on page 80 undefined on input l
ine 74.


LaTeX Warning: Reference `ref:SELFREMAG:EQU:8' on page 80 undefined on input li
ne 90.


LaTeX Warning: Reference `ref:MAG:EQU:12' on page 80 undefined on input line 10
0.

[80]

LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page
 81 undefined on input line 111.


LaTeX Warning: Reference `ref:SELFREMAG:EQU:8' on page 81 undefined on input li
ne 113.


LaTeX Warning: Reference `ref:SELFREMAG:EQU:201' on page 81 undefined on input 
line 134.


LaTeX Warning: Reference `ref:SELFREMAG:EQU:201aa' on page 81 undefined on inpu
t line 141.


LaTeX Warning: Reference `ref:SELFREMAG:EQU:201A' on page 81 undefined on input
 line 155.


LaTeX Warning: Reference `Chp:ref:coordinates' on page 81 undefined on input li
ne 179.


LaTeX Warning: Reference `ref:SELFREMAG:EQU:9' on page 81 undefined on input li
ne 181.

[81 [62]]>]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) [33pdfTeX warning (ext4): 
destination with the same identifier (name{figure.3.3}) has been already used, 
duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.112 \chapter
              {Complex Geometries}pdfTeX warning (ext4): destination with the s
ame identifier (name{figure.3.4}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.112 \chapter
              {Complex Geometries} </<<BUILDDIR>>/python-escript
-5.5/debian/tmp3/posix/doc/cookbook/figures/ScreeshotMayavi2n1.png

LaTeX Warning: Reference `ref:SELFREMAG:EQU:10' on page 82 undefined on input l
ine 191.


LaTeX Warning: Reference `ref:SELFREMAG:EQU:201' on page 82 undefined on input 
line 225.

)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Forward2DMTTEMode.tex

LaTeX Warning: Citation `chave2012magnetotelluric' on page 82 undefined on inpu
t line 18.

[82] [63]

LaTeX Warning: Reference `ref:2DMTTE:EQU:3' on page 83 undefined on input line 
80.


LaTeX Warning: Reference `ref:2DMTTE:EQU:6' on page 83 undefined on input line 
98.


LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page
 83 undefined on input line 107.

[83]

LaTeX Warning: Reference `ref:2DMTTE:EQU:104' on page 84 undefined on input lin
e 125.


LaTeX Warning: Reference `ref:2DMTTE:EQU:201aa' on page 84 undefined on input l
ine 133.


LaTeX Warning: Reference `ref:2DMTTE:EQU:201A' on page 84 undefined on input li
ne 146.


LaTeX Warning: Reference `ref:2DMTTE:EQU:202d' on page 84 undefined on input li
ne 147.


LaTeX Warning: Reference `ref:2DMTTE:EQU:201A' on page 84 undefined on input li
ne 147.

)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardDCRES.tex

LaTeX Warning: Citation `rucker2006three' on page 84 undefined on input line 32
.

[84]

LaTeX Warning: Citation `LOKE2014' on page 85 undefined on input line 62.

[85]

LaTeX Warning: Citation `LOKE2014' on page 86 undefined on input line 124.

)) [86
Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 
[64]]
No file inversion.ind.
No file inversion.bbl.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/intro.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookGravity.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookMagnetic.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookJointDUMMY.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookDcRes.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/IntroPart2.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Domains.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Minimization.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CostFunctions.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/DataSources.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Regularization.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Mapping.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardModels.aux> </build/pyt
hon-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/Sc
reeshotMayavi2n2.png))

Package rerunfilecheck Warning: File `inversion.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Warning: There were undefined references.


LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.

 )
(see the transcript file for additional information){/usr/share/texlive/texmf-d
ist/fonts/enc/dvips/base/8r.enc}</usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmbx10.pfb
Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743
\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st
ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 
and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . 
[65></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmbx5.pfb]></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmbx7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmex1
0.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cmextra/cmex7.
pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/sha
re/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi6.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi7.pfb></usr/share/texlive/tex
mf-dist/fonts/type1/public/amsfonts/cm/cmmi8.pfb></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/
type1/public/amsfonts/cm/cmr5.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmr6.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm
/cmr8.pfb>]></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.
pfb [34]></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb
Chapter 4.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example04.tex></u
sr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy7.pfb></usr/shar
e/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy8.pfb></usr/share/texli
ve/texmf-dist/fonts/type1/urw/courier/ucrb8a.pfb [66]></usr/share/texlive/texmf-dist
/fonts/type1/urw/courier/ucrr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/
urw/courier/ucrro8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic
/uhvb8a.pfb> [67</usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb]>
</usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb></usr/share
/texlive/texmf-dist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-
dist/fonts/type1/urw/times/utmb8a.pfb [68]></usr/share/texlive/texmf-dist/fonts/type
1/urw/times/utmr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utm
r8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb> [69]
Output written on inversion.pdf (86 pages, 5248003 bytes).
Transcript written on inversion.log.
cd debian/tmp3/posix/doc/inversion && bibtex elist


LaTeX Warning: Reference `CHAP HEAT 2a' on page 35 undefined on input line 38.


Underfull \hbox (badness 10000) in paragraph at lines 37--41


LaTeX Warning: Reference `fig:pycad rec' on page 35 undefined on input line 57.


[35]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: elist.aux
I found no \citation commands---while reading file elist.aux
I found no \bibdata command---while reading file elist.aux
I found no \bibstyle command---while reading file elist.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/inversion && bibtex inversion
 [70]cd /<<PKGBUILDDIR>>/doc && zip /<<PKGBUILDDIR>>/debian/stage3/release/doc/escript_examples.zip examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/trapezoid.py examples/usersguide/quad.py examples/usersguide/brick.py examples/usersguide/refine.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example04a.py examples/cookbook/example04b.py examples/cookbook/example05a.py examples/cookbook/example05b.py examples/cookbook/example05c.py examples/cookbook/example06.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example08c.py examples/cookbook/example09m.py examples/cookbook/example09a.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example10m.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/inversion/dc_forward.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh
  adding: examples/usersguide/lid_driven_cavity.py (deflated 55%)
  adding: examples/usersguide/mount.py (deflated 60%)
  adding: examples/usersguide/heatedblock.py (deflated 58%)
  adding: examples/usersguide/helmholtz.py (deflated 56%)
  adding: examples/usersguide/fluid.py (deflated 56%)
  adding: examples/usersguide/poisson.py (deflated 56%)
  adding: examples/usersguide/diffusion.py (deflated 56%)
  adding: examples/usersguide/poisson_vtk.py (deflated 56%)
  adding: examples/usersguide/darcy.py (deflated 57%)
  adding: examples/usersguide/dirac.py (deflated 57%)
  adding: examples/usersguide/slip.py (deflated 57%)
  adding: examples/usersguide/int_save.py (deflated 56%)
  adding: examples/usersguide/wave.py (deflated 60%)
  adding: examples/usersguide/voxet_reader.py (deflated 67%)
  adding: examples/geotutorial/steadystate_variablek.py (deflated 55%)
  adding: examples/geotutorial/steadystate.py (deflated 55%)
  adding: examples/geotutorial/forward_euler.py (deflated 56%)
  adding: examples/geotutorial/myfirstscript.py (deflated 55%)
  adding: examples/geotutorial/backward_euler.py (deflated 56%)
  adding: examples/cookbook/example01a.py (deflated 57%)
  adding: examples/cookbook/example01b.py [36 (deflated 57%)
  adding: examples/cookbook/example03b.py (deflated 58%)
  adding: examples/inversion/create_netcdf.py (deflated 60%)
  adding: examples/inversion/grav_ermapper.py (deflated 57%)
  adding: examples/inversion/grav_netcdf.py (deflated 58%)
  adding: examples/inversion/gravmag_netcdf.py (deflated 60%)
  adding: examples/inversion/gravmag_nodriver.py (deflated 60%)
  adding: examples/inversion/mag_netcdf.pypdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.1}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.139 \begin{python}
                     </<<PKGBUILDDIR>>/debian/tm
p3/posix/doc/cookbook/figures/pycadrec.pdf (deflated 59%)
  adding: examples/inversion/test_commemi1.py (deflated 73%)
This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: inversion.aux
A level-1 auxiliary file: intro.aux
A level-1 auxiliary file: CookGravity.aux
A level-1 auxiliary file: CookMagnetic.aux
A level-1 auxiliary file: CookJointDUMMY.aux
A level-1 auxiliary file: CookDcRes.aux
A level-1 auxiliary file: IntroPart2.aux
A level-1 auxiliary file: Domains.aux
A level-1 auxiliary file: Minimization.aux
A level-1 auxiliary file: CostFunctions.aux
A level-1 auxiliary file: DataSources.aux
A level-1 auxiliary file: Regularization.aux
A level-1 auxiliary file: Mapping.aux
A level-1 auxiliary file: ForwardModels.aux
The style file: plain.bst
Database file #1: inversion.bib
  adding: examples/inversion/test_commemi4.pycd debian/tmp3/posix/doc/inversion && bibtex inversion
> (deflated 75%)
  adding: examples/usersguide/trapezoid.py] (deflated 57%)
  adding: examples/usersguide/quad.py (deflated 56%)
  adding: examples/usersguide/brick.py (deflated 59%)
  adding: examples/usersguide/refine.py (deflated 56%)
  adding: examples/usersguide/poisson_matplotlib.py (deflated 59%)
  adding: examples/cookbook/example01c.py (deflated 58%)
  adding: examples/cookbook/example02.py (deflated 58%)
  adding: examples/cookbook/example03a.py (deflated 58%)
  adding: examples/cookbook/example04a.py (deflated 60%)
  adding: examples/cookbook/example04b.py (deflated 59%)
  adding: examples/cookbook/example05a.py (deflated 60%)
  adding: examples/cookbook/example05b.py (deflated 63%)
  adding: examples/cookbook/example05c.py (deflated 60%)
  adding: examples/cookbook/example06.py (deflated 62%)
  adding: examples/cookbook/example07a.py (deflated 60%)
  adding: examples/cookbook/example07b.py (deflated 60%)
  adding: examples/cookbook/example08a.py (deflated 60%)
  adding: examples/cookbook/example08b.py (deflated 62%)
  adding: examples/cookbook/example08c.py (deflated 62%)
  adding: examples/cookbook/example09m.py (deflated 66%)
  adding: examples/cookbook/example09a.py (deflated 61%)
  adding: examples/cookbook/example10a.py (deflated 58%)
  adding: examples/cookbook/example10b.py (deflated 58%)
  adding: examples/cookbook/example10m.py (deflated 62%)
  adding: examples/cookbook/example11a.py (deflated 58%)
  adding: examples/cookbook/example11b.py (deflated 59%)
  adding: examples/inversion/plot_ermapper.py (deflated 60%)
  adding: examples/inversion/plot_netcdf.py (deflated 56%)
  adding: examples/inversion/dc_forward.py (deflated 63%)
  adding: examples/cookbook/cblib.py (deflated 58%)
  adding: examples/inversion/content.txt (deflated 77%)
  adding: examples/inversion/data/GravitySmall (deflated 3%)
  adding: examples/inversion/data/MagneticSmall (deflated 1%)
  adding: examples/inversion/data/QLDWestGravity (deflated 11%)
  adding: examples/inversion/data/QLDWestMagnetic (deflated 7%)
  adding: examples/inversion/data/GravitySmall.ers (deflated 49%)
  adding: examples/inversion/data/MagneticSmall.ers (deflated 49%)
  adding: examples/inversion/data/QLDWestGravity.ers (deflated 50%)
  adding: examples/inversion/data/QLDWestMagnetic.ers (deflated 50%)
  adding: examples/inversion/data/GravitySmall.nc (deflated 46%)
  adding: examples/inversion/data/MagneticSmall.nc (deflated 43%)
  adding: examples/inversion/data/QLDWestGravity.nc (deflated 12%)
  adding: examples/inversion/data/QLDWestMagnetic.nc (deflated 9%)
  adding: examples/inversion/data/HalfSphere_v1.4.mshThis is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: inversion.aux
A level-1 auxiliary file: intro.aux
A level-1 auxiliary file: CookGravity.aux
A level-1 auxiliary file: CookMagnetic.aux
A level-1 auxiliary file: CookJointDUMMY.aux
A level-1 auxiliary file: CookDcRes.aux
A level-1 auxiliary file: IntroPart2.aux
A level-1 auxiliary file: Domains.aux
A level-1 auxiliary file: Minimization.aux
A level-1 auxiliary file: CostFunctions.aux
A level-1 auxiliary file: DataSources.aux
A level-1 auxiliary file: Regularization.aux
A level-1 auxiliary file: Mapping.aux
A level-1 auxiliary file: ForwardModels.aux
The style file: plain.bst
Database file #1: inversion.bib
cd debian/tmp3/posix/doc/inversion && bibtex intro
 [71]

LaTeX Warning: Citation `lazyauspdc' on page 72 undefined on input line 2248.

) [72]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lin
earPDE.tex

LaTeX Warning: Reference `fig:pycad rec mesh' on page 37 undefined on input lin
e 187.


LaTeX Warning: Reference `fig:pycad rec' on page 37 undefined on input line 191
.

[37] [38pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.2}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.194 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/simplemesh.pngThis is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: intro.aux
I found no \bibdata command---while reading file intro.aux
I found no \bibstyle command---while reading file intro.aux
(There were 2 error messages)
bibtex returned an error, check the blg file

Chapter 4.

LaTeX Warning: Reference `LINEARPDE.SINGLE.3' on page 73 undefined on input lin
e 59.


LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 73 undefined on input lin
e 60.


LaTeX Warning: Reference `LINEARPDE.SINGLE.2' on page 73 undefined on input lin
e 60.

[73cd debian/tmp3/posix/doc/inversion && bibtex CookGravity
]

LaTeX Warning: Reference `ELASTIC CHAP' on page 74 undefined on input line 79.


LaTeX Warning: Reference `LINEARPDE.SINGLE.4' on page 74 undefined on input lin
e 132.


LaTeX Warning: Reference `CHAP: Tutorial' on page 74 undefined on input line 14
6.

[74]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: CookGravity.aux
I found no \bibdata command---while reading file CookGravity.aux
I found no \bibstyle command---while reading file CookGravity.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/inversion && bibtex CookMagnetic
This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: CookMagnetic.aux
I found no \bibdata command---while reading file CookMagnetic.aux
I found no \bibstyle command---while reading file CookMagnetic.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/inversion && bibtex CookJointDUMMY


LaTeX Warning: Reference `TRILINOS' on page 75 undefined on input line 181.


Overfull \hbox (18.97215pt too wide) in paragraph at lines 180--182
\OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in-
di-cates that it is un-de-fined. For more de-tails on \OT1/pcr/m/n/10 SolverOpt
ions
[75]

LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin
e 251.


LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin
e 256.


LaTeX Warning: Reference `LINEARPDE.SYSTEM.5' on page 76 undefined on input lin
e 290.


LaTeX Warning: Reference `LINEARPDE.SINGLE.5' on page 76 undefined on input lin
e 290.

[76This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: CookJointDUMMY.aux
I found no \citation commands---while reading file CookJointDUMMY.aux
I found no \bibdata command---while reading file CookJointDUMMY.aux
I found no \bibstyle command---while reading file CookJointDUMMY.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
]cd debian/tmp3/posix/doc/inversion && bibtex CookDcRes
 [77] (deflated 65%)
Mkdir("/<<PKGBUILDDIR>>/debian/stage3/release/doc/doxygen")
This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: CookDcRes.aux
I found no \bibdata command---while reading file CookDcRes.aux
I found no \bibstyle command---while reading file CookDcRes.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/inversion && bibtex IntroPart2


LaTeX Warning: Reference `ESCRIPT CHAP' on page 78 undefined on input line 418.



LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 78 undefined on input lin
e 422.

[78](cat doc/doxygen/doxygen_esys; echo "PROJECT_NUMBER="Revision_`svnversion`""; echo OUTPUT_DIRECTORY="/<<PKGBUILDDIR>>/debian/stage3/release/doc/doxygen" ) | doxygen -
This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: IntroPart2.aux
I found no \bibdata command---while reading file IntroPart2.aux
I found no \bibstyle command---while reading file IntroPart2.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/inversion && bibtex Domains


LaTeX Warning: Reference `PROJ.1' on page 79 undefined on input line 453.


LaTeX Warning: Reference `PROJ.1' on page 79 undefined on input line 474.


LaTeX Warning: Reference `SEC Solver Options' on page 79 undefined on input lin
e 483.

[79]

LaTeX Warning: Reference `TRILINOS' on page 80 undefined on input line 530.


LaTeX Warning: Reference `WAVE CHAP' on page 80 undefined on input line 532.


LaTeX Warning: Reference `TAB FINLEY SOLVER OPTIONS 1' on page 80 undefined on 
input line 544.


LaTeX Warning: Reference `TAB FINLEY SOLVER OPTIONS 2' on page 80 undefined on 
input line 566.


LaTeX Warning: Reference `TRILINOS' on page 80 undefined on input line 581.

[80] [81] [82]

LaTeX Warning: Citation `MKL' on page 83 undefined on input line 914.


LaTeX Warning: Citation `UMFPACK' on page 83 undefined on input line 919.


LaTeX Warning: Reference `chap:finley' on page 83 undefined on input line 923.

[83]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: Domains.aux
I found no \bibdata command---while reading file Domains.aux
I found no \bibstyle command---while reading file Domains.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/inversion && bibtex Minimization


LaTeX Warning: Citation `Saad' on page 84 undefined on input line 938.


LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 943.


LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 948.


LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 952.


LaTeX Warning: Reference `LUMPING' on page 84 undefined on input line 962.


LaTeX Warning: Reference `LUMPING' on page 84 undefined on input line 967.


LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 973.


LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 977.


LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 981.


LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 985.


LaTeX Warning: Citation `Saad' on page 84 undefined on input line 991.


LaTeX Warning: Citation `Saad' on page 84 undefined on input line 995.


LaTeX Warning: Citation `AMG' on page 84 undefined on input line 999.


LaTeX Warning: Citation `Saad' on page 84 undefined on input line 1004.


LaTeX Warning: Citation `RILU' on page 84 undefined on input line 1015.

[84]

LaTeX Warning: Citation `Trilinos' on page 85 undefined on input line 1043.


LaTeX Warning: Citation `AMG' on page 85 undefined on input line 1051.


LaTeX Warning: Citation `AMG' on page 85 undefined on input line 1054.


LaTeX Warning: Citation `AMG' on page 85 undefined on input line 1057.


(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lum
ping.tex

LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 85 undefined on input lin
e 59.

[85]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: Minimization.aux
I found no \bibdata command---while reading file Minimization.aux
I found no \bibstyle command---while reading file Minimization.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/inversion && bibtex CostFunctions


LaTeX Warning: Reference `FIG LUMPING VALET A' on page 86 undefined on input li
ne 72.


LaTeX Warning: Reference `FIG LUMPING VALET B' on page 86 undefined on input li
ne 78.


LaTeX Warning: Reference `LUMPING WAVE VALET 2' on page 86 undefined on input l
ine 89.


LaTeX Warning: Reference `LUMPING WAVE VALET 2' on page 86 undefined on input l
ine 89.


LaTeX Warning: Reference `LUMPING WAVE VALET 2' on page 86 undefined on input l
ine 96.


LaTeX Warning: Reference `LUMPING WAVE VALET 2' on page 86 undefined on input l
ine 96.


LaTeX Warning: Reference `LUMPING WAVE VALET 3' on page 86 undefined on input l
ine 103.


LaTeX Warning: Reference `LUMPING WAVE VALET 3' on page 86 undefined on input l
ine 103.


LaTeX Warning: Reference `LUMPING WAVE VALET' on page 86 undefined on input lin
e 108.


LaTeX Warning: Reference `LUMPING WAVE VALET 2' on page 86 undefined on input l
ine 108.


LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 86 undefined on input lin
e 114.


LaTeX Warning: Reference `LUMPING WAVE VALET 2' on page 86 undefined on input l
ine 116.


LaTeX Warning: Reference `LUMPING WAVE VALET 3' on page 86 undefined on input l
ine 116.


LaTeX Warning: Reference `FIG LUMPING VALET C' on page 86 undefined on input li
ne 119.

[86 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/lumping_valet_a_1.pngThis is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: CostFunctions.aux
I found no \bibdata command---while reading file CostFunctions.aux
I found no \bibstyle command---while reading file CostFunctions.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/inversion && bibtex DataSources
>]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: DataSources.aux
I found no \bibdata command---while reading file DataSources.aux
I found no \bibstyle command---while reading file DataSources.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/inversion && bibtex Regularization
sh: 1: svnversion: not found
warning: Tag 'PERL_PATH' at line 2057 of file '-' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 2079 of file '-' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"


LaTeX Warning: Reference `eqn:Tform nabla' on page 39 undefined on input line 2
00.


Underfull \hbox (badness 10000) in paragraph at lines 197--202


LaTeX Warning: Reference `eqn:hdgenf2' on page 39 undefined on input line 205.


LaTeX Warning: Reference `eqn:hdgenf2' on page 39 undefined on input line 206.


LaTeX Warning: Reference `Sec:1DHDv0' on page 39 undefined on input line 213.


LaTeX Warning: Reference `eq:hom flux' on page 39 undefined on input line 224.


LaTeX Warning: Reference `NEUMAN 2' on page 39 undefined on input line 255.


LaTeX Warning: Reference `NEUMAN 2b' on page 39 undefined on input line 258.


LaTeX Warning: Reference `eq:inhom flux' on page 39 undefined on input line 258
.


LaTeX Warning: Reference `Sec:2DHD plot' on page 39 undefined on input line 266
.


LaTeX Warning: Reference `fig:steady state heat' on page 39 undefined on input 
line 269.

[39] [40pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.3}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.276 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/simpleheat.png>]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: Regularization.aux
I found no \bibdata command---while reading file Regularization.aux
I found no \bibstyle command---while reading file Regularization.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/inversion && bibtex Mapping
 [87 </<<BUILDDIR>>/python-escri
pt-5.5/debian/tmp3/posix/doc/user/figures/lumping_valet_a_2.pngThis is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: Mapping.aux
I found no \citation commands---while reading file Mapping.aux
I found no \bibdata command---while reading file Mapping.aux
I found no \bibstyle command---while reading file Mapping.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/inversion && bibtex ForwardModels
>])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example05.texThis is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: ForwardModels.aux
I found no \bibdata command---while reading file ForwardModels.aux
I found no \bibstyle command---while reading file ForwardModels.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/inversion && makeindex inversion.idx
This is makeindex, version 2.15 [TeX Live 2019] (kpathsea + Thai support).
Scanning input file inversion.idx....done (105 entries accepted, 0 rejected).
Sorting entries....done (779 comparisons).
Generating output file inversion.ind....done (94 lines written, 0 warnings).
Output written in inversion.ind.
Transcript written in inversion.ilg.
cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex
Searching for include files...
Searching for example files...
Searching for images...
Searching for dot files...
Searching for msc files...
Searching for dia files...
Searching for files to exclude
Searching INPUT for files to process...
Searching for files in directory /<<PKGBUILDDIR>>/escriptcore/src
Searching for files in directory /<<PKGBUILDDIR>>/dudley/src
Searching for files in directory /<<PKGBUILDDIR>>/finley/src
Searching for files in directory /<<PKGBUILDDIR>>/paso/src
Searching for files in directory /<<PKGBUILDDIR>>/pythonMPI/src
Searching for files in directory /<<PKGBUILDDIR>>/ripley/src
Searching for files in directory /<<PKGBUILDDIR>>/speckley/src
Searching for files in directory /<<PKGBUILDDIR>>/weipa/src
Reading and parsing tag files
Parsing files
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/AbstractContinuousDomain.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/AbstractContinuousDomain.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/AbstractContinuousDomain.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/AbstractContinuousDomain.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/AbstractDomain.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/AbstractDomain.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/AbstractDomain.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/AbstractDomain.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/AbstractReducer.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/AbstractReducer.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/AbstractReducer.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/AbstractReducer.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/AbstractSystemMatrix.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/AbstractSystemMatrix.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/AbstractSystemMatrix.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/AbstractSystemMatrix.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/AbstractTransportProblem.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/AbstractTransportProblem.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/AbstractTransportProblem.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/AbstractTransportProblem.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/ArrayOps.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/ArrayOps.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/ArrayOps.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/ArrayOps.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Assert.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Assert.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/BinaryDataReadyOps.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/BinaryDataReadyOps.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/BinaryDataReadyOps.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/BinaryDataReadyOps.h...
Preprocessing /build/python-escrip
Underfull \hbox (badness 10000) in paragraph at lines 18--25


LaTeX Warning: Reference `example4' on page 41 undefined on input line 26.


LaTeX Warning: Reference `fig:anticlinehrmodel' on page 41 undefined on input l
ine 28.

[41pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.74 l30=
         Line(p3, p0) </<<PKGBUILDDIR>>/debian/t
mp3/posix/doc/cookbook/figures/anticlineheatrefraction.pngThis is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
> </build/python
-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_v
alet_u_1.pngentering extended mode
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/esysdoc.cls
Document Class: esysdoc 
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))

Package geometry Warning: Over-specification in `h'-direction.
    `width' (478.00812pt) is ignored.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)t-rg4IyW/python-escript-5.5/escriptcore/src/Data.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Data.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Data.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Data.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataAbstract.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataAbstract.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataAbstract.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataAbstract.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataConstant.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataConstant.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataConstant.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataConstant.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataEmpty.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataEmpty.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataEmpty.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataEmpty.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataException.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataException.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataExpanded.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataExpanded.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataExpanded.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataExpanded.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataFactory.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataFactory.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataFactory.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataFactory.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataLazy.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataLazy.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataLazy.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataLazy.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataReady.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataReady.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataReady.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataReady.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataTagged.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataTagged.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataTagged.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataTagged.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataTypes.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataTypes.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataTypes.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataTypes.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty>])
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty)
(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))

LaTeX Warning: Reference `FIG LUMPING SUPG INC A' on page 88 undefined on input
 line 170.


LaTeX Warning: Reference `FIG LUMPING SUPG INC B' on page 88 undefined on input
 line 170.


LaTeX Warning: Reference `LUMPING SUPG 1' on page 88 undefined on input line 18
0.


LaTeX Warning: Reference `LUMPING SUPG 1' on page 88 undefined on input line 18
0.


LaTeX Warning: Reference `LUMPING SUPG 1' on page 88 undefined on input line 18
7.


LaTeX Warning: Reference `LUMPING SUPG 1' on page 88 undefined on input line 18
7.


LaTeX Warning: Reference `FIG LUMPING SUPG A' on page 88 undefined on input lin
e 191.


LaTeX Warning: Reference `FIG LUMPING SUPG Ab' on page 88 undefined on input li
ne 197.


LaTeX Warning: Reference `FIG LUMPING SUPG B' on page 88 undefined on input lin
e 204.


LaTeX Warning: Reference `LUMPING SUPG 2' on page 88 undefined on input line 21
2.


LaTeX Warning: Reference `LUMPING SUPG 2' on page 88 undefined on input line 21
2.


LaTeX Warning: Reference `LUMPING SUPG 2' on page 88 undefined on input line 21
9.


LaTeX Warning: Reference `LUMPING SUPG 2' on page 88 undefined on input line 21
9.


LaTeX Warning: Reference `LUMPING SUPG 2' on page 88 undefined on input line 22
6.


LaTeX Warning: Reference `LUMPING SUPG 2' on page 88 undefined on input line 22
6.

[88 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/lumping_SUPG_du_1.png
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)DataVector.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataVectorAlt.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataVectorAlt.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataVectorAlt.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataVectorAlt.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataVectorTaipan.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataVectorTaipan.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DataVectorTaipan.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DataVectorTaipan.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Distribution.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Distribution.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Dodgy.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Dodgy.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Dodgy.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Dodgy.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/DomainException.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/DomainException.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/ES_optype.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/ES_optype.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/ES_optype.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/ES_optype.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/escriptcpp.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/escriptcpp.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/EscriptParams.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/EscriptParams.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/EscriptParams.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/EscriptParams.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/EsysException.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/EsysException.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/EsysMPI.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/EsysMPI.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/EsysMPI.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/EsysMPI.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/ExceptionTranslators.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/ExceptionTranslators.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/ExceptionTranslators.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/ExceptionTranslators.h...
Preprocessing /build/python-esc
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty/<<PKGBUILDDIR>>/escriptcore/src/NCHelper.h:23: warning: include file string not found, perhaps you forgot to add its directory to INCLUDE_PATH?
)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.defript-rg4IyW/python-escript-5.5/escriptcore/src/FileWriter.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/FileWriter.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/FunctionSpace.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/FunctionSpace.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/FunctionSpace.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/FunctionSpace.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/FunctionSpaceException.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/FunctionSpaceException.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/FunctionSpaceFactory.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/FunctionSpaceFactory.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/FunctionSpaceFactory.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/FunctionSpaceFactory.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/index.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/index.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/IndexList.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/IndexList.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/LapackInverseHelper.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/LapackInverseHelper.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/LapackInverseHelper.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/LapackInverseHelper.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/MPIDataReducer.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/MPIDataReducer.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/MPIDataReducer.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/MPIDataReducer.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/MPIScalarReducer.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/MPIScalarReducer.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/MPIScalarReducer.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/MPIScalarReducer.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/NCHelper.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/NCHelper.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/NCHelper.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/NCHelper.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/NonReducedVariable.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/NonReducedVariable.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/NonReducedVariable.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/NonReducedVariable.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/NullDomain.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/NullDomain.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/NullDomain.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/NullDomain.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Pointers.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Pointers.h...
Preproce)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)ssing /<<PKGBUILDDIR>>/escriptcore/src/pyerr.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/pyerr.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/pyerr.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/pyerr.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Random.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Random.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Random.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Random.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SolverOptions.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SolverOptions.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SolverOptions.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SolverOptions.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SplitWorld.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SplitWorld.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SplitWorld.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SplitWorld.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SplitWorldException.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SplitWorldException.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SubWorld.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SubWorld.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SubWorld.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SubWorld.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/system_dep.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/system_dep.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SystemMatrixException.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SystemMatrixException.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Taipan.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Taipan.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Taipan.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Taipan.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/TestDomain.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/TestDomain.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/TestDomain.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/TestDomain.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/TransportProblemException.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/TransportProblemException.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Utils.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Utils.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Utils.h...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Utils.h...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/WrappedArray.cpp...
Parsing file /<<PKGBUILDDIR>>/escriptcore/src/WrappedArray.cpp...
Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/WrappedArray.h...
Parsing file /build/python-escript-rg4I
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))> </<<BUILDDIR>>/python-escript-5.
5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_du_2.png
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.defyW/python-escript-5.5/escriptcore/src/WrappedArray.h...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble.h...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble.h...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_addToSystemMatrix.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_addToSystemMatrix.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_AverageElementData.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_AverageElementData.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_CopyElementData.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_CopyElementData.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_CopyNodalData.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_CopyNodalData.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_getAssembleParameters.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_getAssembleParameters.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_getNormal.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_getNormal.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_getSize.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_getSize.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_gradient.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_gradient.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_integrate.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_integrate.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_interpolate.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_interpolate.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_jacobians.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_jacobians.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_LumpedSystem.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_LumpedSystem.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_NodeCoordinates.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_NodeCoordinates.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_Points.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_Points.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_Single_2D.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_Single_2D.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_Single_3D.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_Single_3D.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_System_2D.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_System_2D.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_System_3D.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_System_3D.cpp...
Preproce
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)ssing /<<PKGBUILDDIR>>/dudley/src/DomainFactory.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/DomainFactory.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/DomainFactory.h...
Parsing file /<<PKGBUILDDIR>>/dudley/src/DomainFactory.h...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Dudley.h...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Dudley.h...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/dudleycpp.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/dudleycpp.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h...
Parsing file /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/DudleyException.h...
Parsing file /<<PKGBUILDDIR>>/dudley/src/DudleyException.h...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/DudleyVersion.h...
Parsing file /<<PKGBUILDDIR>>/dudley/src/DudleyVersion.h...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/ElementFile.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/ElementFile.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/ElementFile.h...
Parsing file /<<PKGBUILDDIR>>/dudley/src/ElementFile.h...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/ElementFile_createColoring.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/ElementFile_createColoring.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/ElementFile_distributeByRankOfDOF.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/ElementFile_distributeByRankOfDOF.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/ElementFile_jacobians.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/ElementFile_jacobians.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/ElementType.h...
Parsing file /<<PKGBUILDDIR>>/dudley/src/ElementType.h...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/IndexList.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/IndexList.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/IndexList.h...
Parsing file /<<PKGBUILDDIR>>/dudley/src/IndexList.h...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_distributeByRankOfDOF.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_distributeByRankOfDOF.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_getPattern.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_getPattern.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_optimizeDOFDistribution.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_optimizeDOFDistribution.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_optimizeDOFLabeling.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_optimizeDOFLabeling.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_read.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_read.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_readGmsh.cpp...
Parsing f
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))
\@input{elist.aux}

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/elist.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty
Package `listing', V1.2, <1999/05/25>
)) (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd))ile /<<PKGBUILDDIR>>/dudley/src/Mesh_readGmsh.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_resolveNodeIds.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_resolveNodeIds.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_tet4.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_tet4.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_tri3.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_tri3.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_write.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_write.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeFile.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeFile.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeFile.h...
Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeFile.h...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeFile_createDenseLabelings.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeFile_createDenseLabelings.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeFile_createMappings.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeFile_createMappings.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeFile_createTrilinosGraph.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeFile_createTrilinosGraph.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeFile_gather.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeFile_gather.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeMapping.h...
Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeMapping.h...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/ShapeTable.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/ShapeTable.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/ShapeTable.h...
Parsing file /<<PKGBUILDDIR>>/dudley/src/ShapeTable.h...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Util.cpp...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Util.cpp...
Preprocessing /<<PKGBUILDDIR>>/dudley/src/Util.h...
Parsing file /<<PKGBUILDDIR>>/dudley/src/Util.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_addToSystemMatrix.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_addToSystemMatrix.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_AverageElementData.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_AverageElementData.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_CopyElementData.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_CopyElementData.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_CopyNodalData.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_CopyNodalData.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_getAssembleParameters.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_getAssembleP
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty
****************************************
* Local config file subfigure.cfg used *
****************************************
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/defs.tex)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/verinfo.tex)
Writing index file inversion.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/intro.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookGravity.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookMagnetic.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookJointDUMMY.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookDcRes.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/IntroPart2.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Domains.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Minimization.aux>])))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CostFunctions.aux [89) </build/pyth
on-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping
_SUPG_u_1.png
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/DataSources.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Regularization.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Mapping.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardModels.auxarameters.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_getNormal.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_getNormal.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_getSize.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_getSize.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_gradient.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_gradient.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_integrate.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_integrate.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_interpolate.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_interpolate.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_jacobians.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_jacobians.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_LumpedSystem.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_LumpedSystem.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_NodeCoordinates.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_NodeCoordinates.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Points.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Points.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_1D.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_1D.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_2D.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_2D.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_3D.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_3D.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_C.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_C.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_1D.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_1D.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_2D.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_2D.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_3D.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_3D.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_C.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_C.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/DomainFactory.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/DomainFactory.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/DomainFactory.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/DomainFactory.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/ElementFile.cpp...
Parsi)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd
)
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkiing file /<<PKGBUILDDIR>>/finley/src/ElementFile.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/ElementFile.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/ElementFile.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/ElementFile_jacobians.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/ElementFile_jacobians.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Finley.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/Finley.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/finleycpp.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/finleycpp.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/FinleyDomain.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/FinleyDomain.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/FinleyException.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/FinleyException.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/FinleyVersion.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/FinleyVersion.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/IndexList.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/IndexList.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/IndexList.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/IndexList.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_addPoints.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_addPoints.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_findMatchingFaces.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_findMatchingFaces.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_getPasoPattern.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_getPasoPattern.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_getTrilinosGraph.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_getTrilinosGraph.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_glueFaces.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_glueFaces.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_hex20.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_hex20.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_hex8.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_hex8.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_joinFaces.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_joinFaces.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_merge.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_merge.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_optimizeDOFDistribution.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_optimizeDOFDistribution.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_read.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_read.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_r
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))> </<<PKGBUILDDIR>>/debian/tmp3/pos
ix/doc/user/figures/lumping_SUPG_u_1b.png
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/docguide.tex [2]) [3] [4]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.toc [5]) [6eadGmsh.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_readGmsh.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_rec4.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_rec4.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_rec8.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_rec8.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_write.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_write.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/NodeFile.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/NodeFile.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/NodeFile.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/NodeFile.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/NodeMapping.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/NodeMapping.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Quadrature.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Quadrature.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Quadrature.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/Quadrature.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/ReferenceElements.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/ReferenceElements.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/ReferenceElements.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/ReferenceElements.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/ReferenceElementSets.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/ReferenceElementSets.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/ShapeFunctions.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/ShapeFunctions.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/ShapeFunctions.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/ShapeFunctions.h...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Util.cpp...
Parsing file /<<PKGBUILDDIR>>/finley/src/Util.cpp...
Preprocessing /<<PKGBUILDDIR>>/finley/src/Util.h...
Parsing file /<<PKGBUILDDIR>>/finley/src/Util.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/BiCGStab.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/BiCGStab.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/BlockOps.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/BlockOps.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Coupler.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/Coupler.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Coupler.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/Coupler.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/FCT_Solver.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/FCT_Solver.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/FCT_Solver.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/FCT_Solver.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/FluxLimiter.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/FluxLimiter.cpp...
Preprocessing /<<PKGBUILDDIR>>/]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/intro.tex

LaTeX Warning: Citation `ESCRIPT' on page 7 undefined on input line 26.


LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 7 undefined on input line 27.


)>] [7 [90 </<<BUILDDIR>>/p
ython-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_u_2.png] [8] [9] [10]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookGravity.texpaso/src/FluxLimiter.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/FluxLimiter.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Functions.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/Functions.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Functions.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/Functions.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/GMRES.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/GMRES.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/GMRES2.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/GMRES2.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/ILU.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/ILU.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/MINRES.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/MINRES.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/MKL.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/MKL.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/MKL.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/MKL.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/mmio.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/mmio.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/mmio.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/mmio.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/NewtonGMRES.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/NewtonGMRES.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Options.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/Options.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Options.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/Options.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Paso.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/Paso.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/PasoException.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/PasoException.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/PasoUtil.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/PasoUtil.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/PasoUtil.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/PasoUtil.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Pattern.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/Pattern.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Pattern.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/Pattern.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Pattern_mis.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/Pattern_mis.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Pattern_reduceBandwidth.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/Pattern_reduceBandwidth.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/PCG.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/PCG.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/performance.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/performance.cpp...
Preprocessing /<<BUILDDIR>>/python-escript-5.
Chapter 1.

Underfull \hbox (badness 10000) in paragraph at lines 54--54
[]\OT1/ptm/m/n/10 Figure 1.1: Grav-ity Anomaly Data in $\OML/cmm/m/it/10 mgal$ 
\OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file

Underfull \hbox (badness 10000) in paragraph at lines 65--65
[]\OT1/ptm/m/n/10 Figure 1.2: 3-D con-tour plot of the den-sity dis-tri-bu-tion
 ob-tained by in-ver-sion of file

LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 11 undefined on input line 76
.


LaTeX Warning: Citation `ESCRIPT' on page 11 undefined on input line 77.

[11] (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty5/paso/src/performance.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/performance.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Preconditioner.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/Preconditioner.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Preconditioner.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/Preconditioner.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/ReactiveSolver.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/ReactiveSolver.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/ReactiveSolver.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/ReactiveSolver.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/RILU.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/RILU.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SchurComplement.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SchurComplement.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SharedComponents.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/SharedComponents.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Smoother.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/Smoother.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/solve.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/solve.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Solver.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/Solver.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Solver.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/Solver.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Solver_Function.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/Solver_Function.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SparseMatrix.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SparseMatrix.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SparseMatrix.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/SparseMatrix.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SparseMatrix_getSubmatrix.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SparseMatrix_getSubmatrix.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SparseMatrix_MatrixMatrix.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SparseMatrix_MatrixMatrix.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SparseMatrix_MatrixMatrixTranspose.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SparseMatrix_MatrixMatrixTranspose.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SparseMatrix_MatrixVector.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SparseMatrix_MatrixVector.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SparseMatrix_nullifyRowsAndCols.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SparseMatrix_nullifyRowsAndCols.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SparseMatrix_saveHB.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SparseMatrix_saveHB.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SystemMatrix.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SystemMatrix.cpp...
Preprocessing /<<BUILDDIR>>/python-es)cript-5.5/paso/src/SystemMatrix.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/SystemMatrix.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SystemMatrix_debug.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SystemMatrix_debug.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SystemMatrix_extendedRows.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SystemMatrix_extendedRows.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SystemMatrix_loadMM.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SystemMatrix_loadMM.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SystemMatrix_MatrixVector.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SystemMatrix_MatrixVector.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SystemMatrix_mergeMainAndCouple.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SystemMatrix_mergeMainAndCouple.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SystemMatrixPattern.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SystemMatrixPattern.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SystemMatrixPattern.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/SystemMatrixPattern.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/SystemMatrixPattern_unrollBlocks.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/SystemMatrixPattern_unrollBlocks.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/TFQMR.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/TFQMR.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Transport.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/Transport.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Transport.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/Transport.h...
Preprocessing /<<PKGBUILDDIR>>/paso/src/Transport_solve.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/Transport_solve.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/UMFPACK.cpp...
Parsing file /<<PKGBUILDDIR>>/paso/src/UMFPACK.cpp...
Preprocessing /<<PKGBUILDDIR>>/paso/src/UMFPACK.h...
Parsing file /<<PKGBUILDDIR>>/paso/src/UMFPACK.h...
Preprocessing /<<PKGBUILDDIR>>/pythonMPI/src/ScriptMPI.cpp...
Parsing file /<<PKGBUILDDIR>>/pythonMPI/src/ScriptMPI.cpp...
Preprocessing /<<PKGBUILDDIR>>/pythonMPI/src/ScriptMPIredirect.cpp...
Parsing file /<<PKGBUILDDIR>>/pythonMPI/src/ScriptMPIredirect.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/AbstractAssembler.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/AbstractAssembler.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/blocktools.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/blocktools.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/blocktools.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/blocktools.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/blocktools2.cpp...
Parsing file /<<BUILDDIR>>/python-escr [12>] </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figu
res/QLDWestGravityDataPlot.png
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/pyc
ad.tex
Chapter 5.

LaTeX Warning: Citation `GMSH' on page 91 undefined on input line 24.

[91]

LaTeX Warning: Citation `GMSH' on page 92 undefined on input line 89.


LaTeX Warning: Reference `ESCRIPT CHAP' on page 92 undefined on input line 125.



LaTeX Warning: Citation `GMSH' on page 92 undefined on input line 133.


LaTeX Warning: Reference `fig:PYCAD 0' on page 92 undefined on input line 140.


LaTeX Warning: Citation `GMSH' on page 92 undefined on input line 145.


LaTeX Warning: Reference `chap:finley' on page 92 undefined on input line 145.


LaTeX Warning: Citation `GMSH' on page 92 undefined on input line 154.


LaTeX Warning: Reference `fig:PYCAD 1' on page 92 undefined on input line 158.

[92]ipt-5.5/ripley/src/blocktools2.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/Brick.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/Brick.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/Brick.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/Brick.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/DefaultAssembler2D.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/DefaultAssembler2D.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/DefaultAssembler2D.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/DefaultAssembler2D.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/DefaultAssembler3D.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/DefaultAssembler3D.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/DefaultAssembler3D.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/DefaultAssembler3D.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/domainhelpers.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/domainhelpers.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/domainhelpers.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/domainhelpers.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/LameAssembler2D.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/LameAssembler2D.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/LameAssembler2D.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/LameAssembler2D.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/LameAssembler3D.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/LameAssembler3D.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/LameAssembler3D.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/LameAssembler3D.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/MultiBrick.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/MultiBrick.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/MultiBrick.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/MultiBrick.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/MultiRectangle.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/MultiRectangle.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/MultiRectangle.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/MultiRectangle.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/Rectangle.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/Rectangle.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/Rectangle.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/Rectangle.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/Ripley.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/Ripley.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/ripleycpp.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/ripleycpp.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/RipleyDomain.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/RipleyDomain.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/RipleyDomain.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/RipleyDomain.h...
Preprocessing  [93>] </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/user/figures/quad.pdf>] [13 </<<BUILDDIR>>/python-escri
pt-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravContourMu10.png (PNG copy
)>]

LaTeX Warning: Citation `ESCRIPT' on page 14 undefined on input line 138.

[14] [15 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/inversion/figures/dom2D.pdf> </<<PKGBUILDDIR>>/
debian/tmp3/posix/doc/inversion/figures/dom2DFEM.pdf

pdfTeX warning: pdflatex (file /<<PKGBUILDDIR>>/
debian/tmp3/posix/doc/inversion/figures/dom2DFEM.pdf): PDF inclusion: multiple 
pdfs with page group included in a single page
>]

LaTeX Warning: Citation `ESCRIPT' on page 16 undefined on input line 278.


LaTeX Warning: Citation `ESCRIPTONLINE' on page 16 undefined on input line 278.



LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 282.

(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)

LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 290.

[16]

LaTeX Warning: Reference `fig:PYCAD 2' on page 94 undefined on input line 219.


LaTeX Warning: Reference `fig:PYCAD 2' on page 94 undefined on input line 251.

[94 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/trapezoid.pdf>]/<<PKGBUILDDIR>>/ripley/src/RipleyException.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/RipleyException.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/RipleySystemMatrix.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/RipleySystemMatrix.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/system_dep.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/system_dep.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/WaveAssembler2D.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/WaveAssembler2D.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/WaveAssembler2D.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/WaveAssembler2D.h...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/WaveAssembler3D.cpp...
Parsing file /<<PKGBUILDDIR>>/ripley/src/WaveAssembler3D.cpp...
Preprocessing /<<PKGBUILDDIR>>/ripley/src/WaveAssembler3D.h...
Parsing file /<<PKGBUILDDIR>>/ripley/src/WaveAssembler3D.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/AbstractAssembler.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/AbstractAssembler.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/AbstractAssembler.h...
Parsing file /<<PKGBUILDDIR>>/speckley/src/AbstractAssembler.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/Brick.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/Brick.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/Brick.h...
Parsing file /<<PKGBUILDDIR>>/speckley/src/Brick.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/BrickGradients.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/BrickGradients.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/BrickIntegrals.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/BrickIntegrals.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/BrickReductions.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/BrickReductions.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/CrossDomainCoupler.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/CrossDomainCoupler.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/CrossDomainCoupler.h...
Parsing file /<<PKGBUILDDIR>>/speckley/src/CrossDomainCoupler.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/DefaultAssembler2D.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/DefaultAssembler2D.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/DefaultAssembler2D.h...
Parsing file /<<PKGBUILDDIR>>/speckley/src/DefaultAssembler2D.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/DefaultAssembler3D.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/DefaultAssembler3D.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/DefaultAssembler3D.h...
Parsing file /<<PKGBUILDDIR>>/speckley/src/DefaultAssembler3D.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/domainhelpers.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/domainhelpers.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/domainhelpers.h.

LaTeX Warning: Citation `ERMAPPER' on page 17 undefined on input line 327.


LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 327.


LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 336.

[17] [18] [95 </<<PKGBUILDDIR>>/d
ebian/tmp3/posix/doc/user/figures/brick.pdf>]..
Parsing file /<<PKGBUILDDIR>>/speckley/src/domainhelpers.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/lagrange_functions.h...
Parsing file /<<PKGBUILDDIR>>/speckley/src/lagrange_functions.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/Rectangle.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/Rectangle.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/Rectangle.h...
Parsing file /<<PKGBUILDDIR>>/speckley/src/Rectangle.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/RectangleGradients.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/RectangleGradients.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/RectangleIntegrals.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/RectangleIntegrals.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/RectangleReductions.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/RectangleReductions.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/Speckley.h...
Parsing file /<<PKGBUILDDIR>>/speckley/src/Speckley.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/speckleycpp.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/speckleycpp.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/SpeckleyDomain.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/SpeckleyDomain.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/SpeckleyDomain.h...
Parsing file /<<PKGBUILDDIR>>/speckley/src/SpeckleyDomain.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/SpeckleyException.h...
Parsing file /<<PKGBUILDDIR>>/speckley/src/SpeckleyException.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/system_dep.h...
Parsing file /<<PKGBUILDDIR>>/speckley/src/system_dep.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/WaveAssembler2D.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/WaveAssembler2D.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/WaveAssembler2D.h...
Parsing file /<<PKGBUILDDIR>>/speckley/src/WaveAssembler2D.h...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/WaveAssembler3D.cpp...
Parsing file /<<PKGBUILDDIR>>/speckley/src/WaveAssembler3D.cpp...
Preprocessing /<<PKGBUILDDIR>>/speckley/src/WaveAssembler3D.h...
Parsing file /<<PKGBUILDDIR>>/speckley/src/WaveAssembler3D.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/DataVar.cpp...
Parsing file /<<PKGBUILDDIR>>/weipa/src/DataVar.cpp...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/DataVar.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/DataVar.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/DomainChunk.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/DomainChunk.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/ElementData.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/ElementData.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/EscriptDataset.cpp...
Parsing file /<<PKGBUILDDIR>>/weipa/src/EscriptDataset.cpp...
Preprocessing /<<BUILDDIR>>/python-escript-5

LaTeX Warning: Citation `VISIT' on page 19 undefined on input line 504.


LaTeX Warning: Citation `mayavi' on page 19 undefined on input line 504.


LaTeX Warning: Citation `SILO' on page 19 undefined on input line 516.


LaTeX Warning: Citation `VISIT' on page 19 undefined on input line 517.


LaTeX Warning: Citation `GOCAD' on page 19 undefined on input line 529.


LaTeX Warning: Citation `ESCRIPT' on page 19 undefined on input line 631.

[19] [20 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/inversion/figures/QLDGravContourMu01.png (PNG copy)> </build/python-escript-rg
4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravContourM
u1.png (PNG copy)> </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/inversion/figures/QLDGravContourMu100.png (PNG copy)> </build/python
-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDG
ravContourMu1000.png (PNG copy)>] [21 </<<BUILDDIR>>/python-escr
ipt-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepthMu01.png (PNG copy)
> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/invers
ion/figures/QLDGravDepthMu1.png (PNG copy)> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepthMu10.png (PNG
 copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/
inversion/figures/QLDGravDepthMu100.png (PNG copy)> </build/python-escript-rg4I
yW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepthMu100
0.png (PNG copy)>]

LaTeX Warning: Reference `fig:PYCAD 5' on page 96 undefined on input line 339.


LaTeX Warning: Reference `fig:PYCAD 5' on page 96 undefined on input line 358.

[96 [22 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/refine.pdf>] </<<PKGBUILDDIR>>/debian/
tmp3/posix/doc/inversion/figures/onshore-offshore.png [97].5/weipa/src/EscriptDataset.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/EscriptDataset.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/FinleyDomain.cpp...
Parsing file /<<PKGBUILDDIR>>/weipa/src/FinleyDomain.cpp...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/FinleyDomain.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/FinleyDomain.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/FinleyElements.cpp...
Parsing file /<<PKGBUILDDIR>>/weipa/src/FinleyElements.cpp...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/FinleyElements.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/FinleyElements.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/FinleyNodes.cpp...
Parsing file /<<PKGBUILDDIR>>/weipa/src/FinleyNodes.cpp...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/FinleyNodes.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/FinleyNodes.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/NodeData.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/NodeData.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/RipleyDomain.cpp...
Parsing file /<<PKGBUILDDIR>>/weipa/src/RipleyDomain.cpp...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/RipleyDomain.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/RipleyDomain.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/RipleyElements.cpp...
Parsing file /<<PKGBUILDDIR>>/weipa/src/RipleyElements.cpp...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/RipleyElements.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/RipleyElements.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/RipleyNodes.cpp...
Parsing file /<<PKGBUILDDIR>>/weipa/src/RipleyNodes.cpp...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/RipleyNodes.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/RipleyNodes.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/SpeckleyDomain.cpp...
Parsing file /<<PKGBUILDDIR>>/weipa/src/SpeckleyDomain.cpp...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/SpeckleyDomain.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/SpeckleyDomain.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/SpeckleyElements.cpp...
Parsing file /<<PKGBUILDDIR>>/weipa/src/SpeckleyElements.cpp...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/SpeckleyElements.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/SpeckleyElements.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/SpeckleyNodes.cpp...
Parsing file /<<PKGBUILDDIR>>/weipa/src/SpeckleyNodes.cpp...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/SpeckleyNodes.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/SpeckleyNodes.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/VisItControl.cpp...
Parsing file /<<PKGBUILDDIR>>/weipa/src/VisItControl.cpp...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/VisItControl.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/VisItControl.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/VisItData.cpp...
Parsing file /<<BUILDDIR>>/python-escript [98]/<<PKGBUILDDIR>>/escriptcore/src/ArrayOps.h:36: warning: the name 'LocalOps.h' supplied as the argument in the \file statement is not an input file


LaTeX Warning: Citation `GMSH' on page 99 undefined on input line 579.


LaTeX Warning: Citation `RIGHTHANDRULE' on page 99 undefined on input line 600.


[99/<<PKGBUILDDIR>>/escriptcore/src/system_dep.h:18: warning: the name 'escript/src/system_dep.h' supplied as the argument in the \file statement is not an input file
]

LaTeX Warning: Citation `GMSH' on page 100 undefined on input line 682.

[100]

LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 698.


LaTeX Warning: Citation `IDEAS' on page 101 undefined on input line 702.


LaTeX Warning: Citation `VRML' on page 101 undefined on input line 706.


LaTeX Warning: Citation `STL' on page 101 undefined on input line 710.


LaTeX Warning: Citation `NASTRAN' on page 101 undefined on input line 714.


LaTeX Warning: Citation `MEDIT' on page 101 undefined on input line 718.


LaTeX Warning: Citation `CGNS' on page 101 undefined on input line 722.


LaTeX Warning: Citation `PLOT3D' on page 101 undefined on input line 726.


LaTeX Warning: Citation `DIFFPACK' on page 101 undefined on input line 730.


LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 734.


LaTeX Warning: Citation `TETGEN' on page 101 undefined on input line 734.


LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 738.


LaTeX Warning: Citation `NETGEN' on page 101 undefined on input line 742.

[101] [102]) [103]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Mod
els.tex [104]
Chapter 6.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sto
kessolver.tex

LaTeX Warning: Reference `Stokes 1' on page 105 undefined on input line 50.


LaTeX Warning: Reference `Stokes 2' on page 105 undefined on input line 50.


LaTeX Warning: Citation `AAMIRBERKYAN2008' on page 105 undefined on input line 
69.


LaTeX Warning: Citation `MBENZI2005' on page 105 undefined on input line 69.


LaTeX Warning: Reference `STOKES' on page 105 undefined on input line 73.


LaTeX Warning: Reference `STOKES' on page 105 undefined on input line 88.

[105]

LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
ne 95.


LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li
ne 98.


LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
ne 98.


LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
ne 113.


LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li
ne 117.


LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
ne 118.


LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li
ne 121.


LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li
ne 125.


LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
ne 139.


LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
ne 143.


LaTeX Warning: Citation `ELMAN' on page 106 undefined on input line 148.


LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
ne 160.


LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
ne 169.

[106>]]) [23

LaTeX Warning: Reference `STOKES total V1' on page 107 undefined on input line 
187.


LaTeX Warning: Reference `STOKES total P2' on page 107 undefined on input line 
187.


LaTeX Warning: Reference `STOKES total V2' on page 107 undefined on input line 
187.


LaTeX Warning: Reference `STOKES STOPPING CRITERIA' on page 107 undefined on in
put line 221.


LaTeX Warning: Reference `STOKES TOL1' on page 107 undefined on input line 256.



LaTeX Warning: Reference `STOKES TOL2' on page 107 undefined on input line 257.



LaTeX Warning: Reference `STOKES EST 1' on page 107 undefined on input line 264
.


LaTeX Warning: Reference `STOKES EST 2' on page 107 undefined on input line 264
.

[107]]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookMagnetic.tex [24]

LaTeX Warning: Reference `STOKES TOL1' on page 108 undefined on input line 305.



LaTeX Warning: Reference `STOKES ITER STEP 1' on page 108 undefined on input li
ne 306.


LaTeX Warning: Reference `STOKES LARGE BV1' on page 108 undefined on input line
 308.


LaTeX Warning: Reference `STOKES TOL2' on page 108 undefined on input line 310.



LaTeX Warning: Reference `STOKES ITER STEP 2' on page 108 undefined on input li
ne 311.


LaTeX Warning: Reference `STOKES STOPPING CRITERIA' on page 108 undefined on in
put line 319.

[108]

LaTeX Warning: Citation `LBB' on page 109 undefined on input line 334.


LaTeX Warning: Reference `STOKES ITER STEP 1' on page 109 undefined on input li
ne 398.


LaTeX Warning: Reference `STOKES P OPERATOR' on page 109 undefined on input lin
e 398.


LaTeX Warning: Reference `STOKES P PREC' on page 109 undefined on input line 40
2.

[109]
Chapter 2.

Underfull \hbox (badness 10000) in paragraph at lines 7--7
[]\OT1/ptm/m/n/10 Figure 2.1: Mag-netic anomaly data in $\OML/cmm/m/it/10 nT$ \
OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file
[25] [26 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/inversion/figures/QLDWestMagneticDataPlot.png)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dar
cyflux.tex

LaTeX Warning: Reference `DARCY PROBLEM' on page 110 undefined on input line 48
.


LaTeX Warning: Reference `DARCY PROBLEM' on page 110 undefined on input line 49
.

[110]

LaTeX Warning: Reference `DARCY PROBLEM' on page 111 undefined on input line 51
.


LaTeX Warning: Reference `DARCY PROBLEM SIMPLE FLUX' on page 111 undefined on i
nput line 73.


LaTeX Warning: Reference `DARCY PROBLEM POST FLUX A' on page 111 undefined on i
nput line 105.


LaTeX Warning: Reference `SEC DARCY SIMPLE' on page 111 undefined on input line
 109.


LaTeX Warning: Reference `SEC DARCY POST' on page 111 undefined on input line 1
13.


LaTeX Warning: Reference `SEC DARCY POST' on page 111 undefined on input line 1
17.


LaTeX Warning: Reference `DARCY PROBLEM' on page 111 undefined on input line 12
6.

[111] [112 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/user/figures/darcy_result.png (PNG copy)>])

LaTeX Warning: Citation `Muhlhaus2005' on page 113 undefined on input line 28.


LaTeX Warning: Citation `Muhlhaus2005' on page 113 undefined on input line 55.


LaTeX Warning: Reference `IKM-EQU-5' on page 113 undefined on input line 57.


LaTeX Warning: Reference `IKM-EQU-4' on page 113 undefined on input line 57.


LaTeX Warning: Reference `IKM-EQU-2' on page 113 undefined on input line 61.

[113]

LaTeX Warning: Reference `IKM-EQU-3' on page 114 undefined on input line 91.


LaTeX Warning: Reference `IKM-EQU-8c' on page 114 undefined on input line 120.


LaTeX Warning: Reference `IKM-EQU-2b' on page 114 undefined on input line 121.


LaTeX Warning: Reference `IKM-EQU-10' on page 114 undefined on input line 126.


LaTeX Warning: Reference `IKM-EQU-1' on page 114 undefined on input line 126.


LaTeX Warning: Reference `IKM-EQU-2' on page 114 undefined on input line 132.


LaTeX Warning: Reference `STOKES SOLVE' on page 114 undefined on input line 133
.


LaTeX Warning: Reference `IKM-EQU-44' on page 114 undefined on input line 157.


LaTeX Warning: Reference `IKM-EQU-45' on page 114 undefined on input line 158.

[114]

LaTeX Warning: Citation `LBB' on page 115 undefined on input line 206.

[115]

LaTeX Warning: Reference `IKM-EQU-8c' on page 116 undefined on input line 279.


LaTeX Warning: Reference `IKM-EQU-5b' on page 116 undefined on input line 290.


(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fau
ltsystem.tex

LaTeX Warning: Reference `FAULTSYSTEM2D' on page 116 undefined on input line 39
.

[116 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/use
r/figures/FaultSystem2D.pdf>]> </<<BUILDDIR>>/p
ython-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagContourMu01.png
 (PNG copy)>]

LaTeX Warning: Reference `FAULTSYSTEM2D' on page 117 undefined on input line 12
0.


LaTeX Warning: Reference `eq:2D line 1' on page 117 undefined on input line 144
.

[117/<<PKGBUILDDIR>>/escriptcore/src/Data.cpp:4702: warning: no matching class member found for 
  DataTypes::CplxVectorType::reference Data::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy)
Possible candidates:
  DataTypes::RealVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)
  DataTypes::CplxVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)

/<<PKGBUILDDIR>>/escriptcore/src/Data.cpp:4710: warning: no matching class member found for 
  DataTypes::CplxVectorType::const_reference Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy)
Possible candidates:
  DataTypes::RealVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)
  DataTypes::CplxVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)

]/<<PKGBUILDDIR>>/escriptcore/src/Data.cpp:5672: warning: documented symbol 'Data escript::condEvalWorker' was not declared or defined.
/<<PKGBUILDDIR>>/escriptcore/src/Data.h:1970: warning: no uniquely matching class member found for 
  DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy)
Possible candidates:
  DataTypes::real_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0)' at line 624 of file /<<PKGBUILDDIR>>/escriptcore/src/Data.h
  DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::cplx_t dummy)' at line 627 of file /<<PKGBUILDDIR>>/escriptcore/src/Data.h

/<<PKGBUILDDIR>>/escriptcore/src/Data.h:2002: warning: no uniquely matching class member found for 
  const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, std::complex< real_t > dummy) const
Possible candidates:
  const DataTypes::real_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const' at line 610 of file /<<PKGBUILDDIR>>/escriptcore/src/Data.h
  const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy) const' at line 613 of file /<<PKGBUILDDIR>>/escriptcore/src/Data.h



LaTeX Warning: Reference `eq:2D line 3' on page 118 undefined on input line 169
.

[118]

LaTeX Warning: Citation `IGRF' on page 27 undefined on input line 96.


LaTeX Warning: Citation `AGRF' on page 27 undefined on input line 97.

) [27/<<PKGBUILDDIR>>/escriptcore/src/DataTagged.cpp:1028: warning: no matching class member found for 
  DataTypes::CplxVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) const
Possible candidates:
  DataTypes::RealVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) const
  DataTypes::CplxVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy) const

/<<PKGBUILDDIR>>/escriptcore/src/DataTagged.cpp:1039: warning: no matching class member found for 
  DataTypes::CplxVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy)
Possible candidates:
  DataTypes::RealVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0)
  DataTypes::CplxVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)

]/<<PKGBUILDDIR>>/escriptcore/src/DataTagged.h:757: warning: no matching class member found for 
  DataTypes::CplxVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy)
Possible candidates:
  DataTypes::RealVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0)
  DataTypes::CplxVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)

/<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:56: warning: no matching file member found for 
void escript::DataTypes::pointToStream(std::ostream &os, const CplxVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep, const std::string &sep)
Possible candidates:
 'void pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep=true, const std::string &sep=",")' at line 62 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h

/<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:131: warning: no matching file member found for 
void escript::DataTypes::pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep, const std::string &sep)
Possible candidates:
 'void pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep=true, const std::string &sep=",")' at line 62 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h

/<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:421: warning: no matching file member found for 
std::string escript::DataTypes::pointToString(const escript::DataTypes::DataVectorAlt< cplx_t > &data, const ShapeType &shape, int offset, const std::string &prefix)
Possible candidates:
 'std::string pointToString(const RealVectorType &data, const ShapeType &shape, int offset, const std::string &prefix)' at line 121 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h

/<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:492: warning: no matching file member found for 
std::string escript::DataTypes::pointToString(const escript::DataTypes::DataVectorAlt< real_t > &data, const ShapeType &shape, int offset, const std::string &prefix)
Possible candidates:
 'std::string pointToString(const RealVectorType &data, const ShapeType &shape, int offset, const std::string &prefix)' at line 121 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h

/<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:558: warning: no matching file member found for 
void escript::DataTypes::copyPoint(escript::DataTypes::DataVectorAlt< real_t > &dest, RealVectorType::size_type doffset, RealVectorType::size_type nvals, const RealVectorType &src, RealVectorType::size_type soffset)
Possible candidates:
 'void copyPoint(RealVectorType &dest, vec_size_type doffset, vec_size_type nvals, const RealVectorType &src, vec_size_type soffset)' at line 136 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h

/<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:569: warning: no matching file member found for 
void escript::DataTypes::copyPoint(escript::DataTypes::DataVectorAlt< cplx_t > &dest, CplxVectorType::size_type doffset, CplxVectorType::size_type nvals, const CplxVectorType &src, CplxVectorType::size_type soffset)
Possible candidates:
 'void copyPoint(RealVectorType &dest, vec_size_type doffset, vec_size_type nvals, const RealVectorType &src, vec_size_type soffset)' at line 136 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h

/<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:585: warning: no matching file member found for 
void escript::DataTypes::fillComplexFromReal(const escript::DataTypes::DataVectorAlt< real_t > &r, CplxVectorType &c)
Possible candidates:
 'void fillComplexFromReal(const RealVectorType &r, CplxVectorType &c)' at line 154 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h

/<<PKGBUILDDIR>>/escriptcore/src/DataVectorAlt.h:290: warning: no matching class member found for 
  template < T >
  escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(escript::DataTypes::DataVectorAlt< T >::long size, const DataVectorAlt< T >::value_type val, const DataVectorAlt< T >::size_type blockSize)
Possible candidates:
  escript::DataTypes::DataVectorAlt< T >::DataVectorAlt()
  escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(const DataVectorAlt< T > &other)
  escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(const size_type size, const value_type val=0.0, const size_type blockSize=1)

 [28/<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.h:200: warning: no matching file member found for 
void escript::hermitian(const &in, const std::vector< int > &inShape, long inOffset, &ev, const std::vector< int > &evShape, long evOffset)
Possible candidates:
 'void hermitian(const DataTypes::CplxVectorType &in, const DataTypes::ShapeType &inShape, DataTypes::CplxVectorType::size_type inOffset, DataTypes::CplxVectorType &ev, const DataTypes::ShapeType &evShape, DataTypes::CplxVectorType::size_type evOffset)' at line 915 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.cpp

/<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.h:219: warning: no matching file member found for 
void escript::antihermitian(const &in, const std::vector< int > &inShape, long inOffset, &ev, const std::vector< int > &evShape, long evOffset)
Possible candidates:
 'void antihermitian(const DataTypes::CplxVectorType &in, const DataTypes::ShapeType &inShape, typename DataTypes::CplxVectorType::size_type inOffset, DataTypes::CplxVectorType &ev, const DataTypes::ShapeType &evShape, typename DataTypes::CplxVectorType::size_type evOffset)' at line 962 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.cpp

 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/inversion/figures/QLDMagContourMu0001.png (PNG copy)> </build/python-escript
-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagContou
rMu001.png (PNG copy)> </<<PKGBUILDDIR>>/debian/
tmp3/posix/doc/inversion/figures/QLDMagContourMu1.png (PNG copy)> </build/pytho
n-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLD
MagContourMu10.png (PNG copy)>]

LaTeX Warning: Reference `eq:2D line 3' on page 119 undefined on input line 307
.


LaTeX Warning: Reference `eq:2D line 4d' on page 119 undefined on input line 30
7.

[119 [29 </<<BUILDDIR>>/python-escrip
t-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagDepthMu0001.png] (PNG copy)>
 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversi
on/figures/QLDMagDepthMu001.png (PNG copy)> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagDepthMu01.png (PNG 
copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/i
nversion/figures/QLDMagDepthMu1.png (PNG copy)> </<<BUILDDIR>>/p
ython-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagDepthMu10.png (
PNG copy)>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookJointDUMMY.tex [30]
Chapter 3.
) [31]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookDcRes.tex [32]

LaTeX Warning: Reference `eq:2D line 3' on page 120 undefined on input line 325
.


LaTeX Warning: Reference `eq:2D line 4d' on page 120 undefined on input line 32
5.


LaTeX Warning: Reference `Slip CHAP' on page 120 undefined on input line 383.

)) [120]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
ley.tex
Chapter 7.

LaTeX Warning: Reference `sec:dudley' on page 121 undefined on input line 29.


LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 58.



LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 65.



LaTeX Warning: Reference `Zienc,NumHand' on page 121 undefined on input line 74
.


LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 89.



LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 98.



LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 109
.

[121/<<PKGBUILDDIR>>/dudley/src/DudleyDomain.cpp:1296: warning: no uniquely matching class member found for 
  void dudley::DudleyDomain::setToIntegrals(std::vector< real_t > &integrals, const escript::Data &arg) const
Possible candidates:
  virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 550 of file /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h
  virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 552 of file /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h

/<<PKGBUILDDIR>>/dudley/src/DudleyDomain.cpp:1302: warning: no uniquely matching class member found for 
  void dudley::DudleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const
Possible candidates:
  virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 550 of file /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h
  virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 552 of file /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h

]/<<PKGBUILDDIR>>/dudley/src/NodeFile_createDenseLabelings.cpp:151: warning: no matching class member found for 
  dim_t dudley::NodeFile::createDenseNodeLabeling(std::vector< index_t > &nodeDistribution, const std::vector< index_t > &dofDistribution)
Possible candidates:
  dim_t dudley::NodeFile::createDenseNodeLabeling(IndexVector &nodeDistribution, const IndexVector &dofDistribution)
  dim_t finley::NodeFile::createDenseNodeLabeling(IndexVector &nodeDistribution, const IndexVector &dofDistribution)


Chapter 4.

LaTeX Warning: Citation `LOKE2014' on page 33 undefined on input line 30.

[33]/<<PKGBUILDDIR>>/finley/src/ElementFile.cpp:217: warning: no matching class member found for 
  void finley::ElementFile::relabelNodes(const std::vector< index_t > &newNode, index_t offset)
Possible candidates:
  void dudley::ElementFile::relabelNodes(const index_t *newNode, index_t offset)
  void finley::ElementFile::relabelNodes(const IndexVector &newNode, index_t offset)



LaTeX Warning: Reference `FINLEY FIG 01' on page 122 undefined on input line 13
6.


LaTeX Warning: Reference `FINLEY TAB 1' on page 122 undefined on input line 152
.


LaTeX Warning: Reference `FINLEY.FIG:1' on page 122 undefined on input line 154
.


LaTeX Warning: Reference `FINLEY.FIG:2' on page 122 undefined on input line 154
.


LaTeX Warning: Reference `FINLEY.FIG:4' on page 122 undefined on input line 154
.


Underfull \vbox (badness 1226) has occurred while \output is active [122 </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/F
inleyMesh.pdf/<<PKGBUILDDIR>>/finley/src/FinleyDomain.cpp:1699: warning: no uniquely matching class member found for 
  void finley::FinleyDomain::setToIntegrals(std::vector< real_t > &integrals, const escript::Data &arg) const
Possible candidates:
  virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 680 of file /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h
  virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 682 of file /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h

/<<PKGBUILDDIR>>/finley/src/FinleyDomain.cpp:1705: warning: no uniquely matching class member found for 
  void finley::FinleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const
Possible candidates:
  virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 680 of file /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h
  virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 682 of file /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h

>] [123 </<<PKGBUILDDIR>>/debian/tm
p3/posix/doc/user/figures/FinleyContact.pdf>] [124]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
leyelements.tex/<<PKGBUILDDIR>>/paso/src/Options.cpp:44: warning: no matching class member found for 
  paso::Options::Options(const bp::object &options)
Possible candidates:
  paso::Options::Options()
  paso::Options::Options(const boost::python::object &options)

) [125] [126] [34 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/inversion/figures/HalfSphere.png/<<PKGBUILDDIR>>/ripley/src/Brick.cpp:3683: warning: no uniquely matching class member found for 
  escript::Data ripley::Brick::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &what, long seed, const bp::tuple &filter) const
Possible candidates:
  virtual escript::Data ripley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 213 of file /<<PKGBUILDDIR>>/ripley/src/Brick.h
  virtual escript::Data speckley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 216 of file /<<PKGBUILDDIR>>/speckley/src/Brick.h

/<<PKGBUILDDIR>>/ripley/src/Brick.cpp:3736: warning: no uniquely matching class member found for 
  escript::Data ripley::Brick::randomFillWorker(const std::vector< int > &shape, long seed, const bp::tuple &filter) const
Possible candidates:
  virtual escript::Data ripley::Brick::randomFillWorker(const escript::DataTypes::ShapeType &shape, long seed, const boost::python::tuple &filter) const' at line 299 of file /<<PKGBUILDDIR>>/ripley/src/Brick.h
  escript::Data speckley::Brick::randomFillWorker(const escript::DataTypes::ShapeType &shape, long seed, const boost::python::tuple &filter) const' at line 362 of file /<<PKGBUILDDIR>>/speckley/src/Brick.h

/<<PKGBUILDDIR>>/ripley/src/Rectangle.cpp:2531: warning: no uniquely matching class member found for 
  escript::Data ripley::Rectangle::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &what, long seed, const bp::tuple &filter) const
Possible candidates:
  virtual escript::Data ripley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 216 of file /<<PKGBUILDDIR>>/ripley/src/Rectangle.h
  virtual escript::Data speckley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 217 of file /<<PKGBUILDDIR>>/speckley/src/Rectangle.h



LaTeX Warning: Reference `FINLEY MACRO TRI' on page 127 undefined on input line
 328.


LaTeX Warning: Reference `FINLEY MACRO REC' on page 127 undefined on input line
 328.


LaTeX Warning: Reference `STOKES PROBLEM' on page 127 undefined on input line 3
42.


LaTeX Warning: Reference `FINLEY MESHES' on page 127 undefined on input line 34
3.


LaTeX Warning: Reference `TRILINOS' on page 127 undefined on input line 346.


LaTeX Warning: Reference `TAB FINLEY SOLVER OPTIONS 1' on page 127 undefined on
 input line 347.


Underfull \hbox (badness 1910) in paragraph at lines 383--383
[]\OT1/ptm/m/n/10 Table 7.2: Solvers avail-able for [] and the \OT1/pcr/m/n/10 
PASO [][]\OT1/ptm/m/n/10 pack-age and the rel-e-vant op-tions in

Underfull \vbox (badness 1337) has occurred while \output is active [127 </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/F
inleyMacroLeg.pdf> </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/user/figures/FinleyMacroTri.pdf> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/user/figures/FinleyMacroRec.pdf>]/<<PKGBUILDDIR>>/speckley/src/Rectangle.cpp:1257: warning: no uniquely matching class member found for 
  escript::Data speckley::Rectangle::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &fs, long seed, const bp::tuple &filter) const
Possible candidates:
  virtual escript::Data ripley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 216 of file /<<PKGBUILDDIR>>/ripley/src/Rectangle.h
  virtual escript::Data speckley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 217 of file /<<PKGBUILDDIR>>/speckley/src/Rectangle.h



LaTeX Warning: Citation `GMSH' on page 128 undefined on input line 444.


LaTeX Warning: Citation `GMSH' on page 128 undefined on input line 456.

[128]) [129]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/rip
ley.tex [130]
Chapter 8.

LaTeX Warning: Reference `fig:ripleyrect' on page 131 undefined on input line 9
2.


LaTeX Warning: Reference `sec:ripleyfuncs' on page 131 undefined on input line 
96.

[131]>]) [35] [36] [37] [38]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/IntroPart2.tex [132 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/user/figures/RipleyMesh.pdf>]

LaTeX Warning: Reference `fig:ripleyrect' on page 133 undefined on input line 1
57.

) [133
Chapter 5.

LaTeX Warning: Citation `ESCRIPT' on page 39 undefined on input line 54.

[39]]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/spe
ckley.tex [134]

LaTeX Warning: Citation `ESCRIPT' on page 40 undefined on input line 79.


(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Drivers.tex [40 </<<PKGBUILDDIR>>/debian/tmp3/
posix/doc/inversion/figures/classdep.pdf>]

LaTeX Warning: Citation `Nocedal1980' on page 41 undefined on input line 71.

[41]
Chapter 9.

LaTeX Warning: Reference `SPECKLEY:FIG:MESHES' on page 135 undefined on input l
ine 56.

[135

LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 124.


LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 182.

[42]]) [136 </<<PKGBUILDDIR>>/debian/tmp3/posix/
doc/user/figures/speckley3.png (PNG copy)> </<<BUILDDIR>>/python
-escript-5.5/debian/tmp3/posix/doc/user/figures/speckley6.png (PNG copy)> </bui
ld/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/
speckley9.png (PNG copy)>]))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wei
pa.tex [43]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Domains.tex [44]
Chapter 10.

LaTeX Warning: Reference `sec:weipafuncs' on page 137 undefined on input line 3
2.

[137]
Chapter 6.

LaTeX Warning: Citation `Featherstone2008a' on page 45 undefined on input line 
48.

[45

LaTeX Warning: Citation `GOCAD' on page 138 undefined on input line 136.

[138]] [46 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/inversion/figures/cartesian.pdf

LaTeX Warning: Citation `VisIt' on page 139 undefined on input line 174.


LaTeX Warning: Reference `ELASTIC CHAP' on page 139 undefined on input line 182
.

[139>]] [47 </<<BUILDDIR>>/python-esc
ript-5.5/debian/tmp3/posix/doc/inversion/figures/geosphir.png) [140]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/tri
linos.tex
Chapter 11.

LaTeX Warning: Citation `TrilinosWeb' on page 141 undefined on input line 18.


LaTeX Warning: Reference `CONST1a' on page 141 undefined on input line 26.


LaTeX Warning: Reference `BC2' on page 141 undefined on input line 26.


LaTeX Warning: Reference `simplemesh' on page 141 undefined on input line 33.

[141]>]
Underfull \hbox (badness 10000) in paragraph at lines 261--261
[][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t
ion can be sup-ported by build-ing sub-classes of the
[48]

LaTeX Warning: Reference `basic' on page 142 undefined on input line 84.


LaTeX Warning: Reference `basic' on page 142 undefined on input line 114.

[142]-5.5/weipa/src/VisItData.cpp...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/VisItData.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/VisItData.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/vtkCellType.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/vtkCellType.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/weipa.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/weipa.h...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/weipacpp.cpp...
Parsing file /<<PKGBUILDDIR>>/weipa/src/weipacpp.cpp...
Preprocessing /<<PKGBUILDDIR>>/weipa/src/WeipaException.h...
Parsing file /<<PKGBUILDDIR>>/weipa/src/WeipaException.h...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating file sources...
Parsing code for file AbstractAssembler.cpp...
Generating code for file AbstractAssembler.h...
Generating code for file AbstractAssembler.h...
Parsing code for file AbstractContinuousDomain.cpp...
Generating code for file AbstractContinuousDomain.h...
Parsing code for file AbstractDomain.cpp...
Generating code for file AbstractDomain.h...
Parsing code for file AbstractReducer.cpp...
Generating code for file AbstractReducer.h...
Parsing code for file AbstractSystemMatrix.cpp...
Generating code for file AbstractSystemMatrix.h...
Parsing code for file AbstractTransportProblem.cpp...
Generating code for file AbstractTransportProblem.h...
Parsing code for file ArrayOps.cpp...
Generating code for file ArrayOps.h...
Generating code for file Assemble.h...
Generating code for file Assemble.h...
Parsing code for file Assemble_addToSystemMatrix.cpp...
Parsing code for file Assemble_addToSystemMatrix.cpp...
Parsing code for file Assemble_AverageElementData.cpp...
Parsing code for file Assemble_AverageElementData.cpp...
Parsing code for file Assemble_CopyElementData.cpp...
Parsing code for file Assemble_CopyElementData.cpp...
Parsing code for file Assemble_CopyNodalData.cpp...
Parsing code for file Assemble_CopyNodalData.cpp...
Parsing code for file Assemble_getAssembleParameters.cpp...
Parsing code for file Assemble_getAssembleParameters.cpp...
Parsing code for file Assemble_getNormal.cpp...
Parsing code for file Assembl [49]) [50

LaTeX Warning: Reference `basic' on page 143 undefined on input line 124.


LaTeX Warning: Reference `resEQ' on page 143 undefined on input line 162.


LaTeX Warning: Reference `matrixEQ' on page 143 undefined on input line 162.


LaTeX Warning: Citation `Briggs2000' on page 143 undefined on input line 164.

[143]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Minimization.tex]
Chapter 7.

LaTeX Warning: Citation `Nocedal1980' on page 51 undefined on input line 40.

[51]

LaTeX Warning: Citation `Briggs2000' on page 144 undefined on input line 188.


LaTeX Warning: Citation `Stuben2001281' on page 144 undefined on input line 188
.


LaTeX Warning: Citation `Vanek1996' on page 144 undefined on input line 188.


LaTeX Warning: Citation `Tuminaro2000' on page 144 undefined on input line 188.



LaTeX Warning: Citation `TrilinosWeb' on page 144 undefined on input line 205.


LaTeX Warning: Reference `defaultAMG' on page 144 undefined on input line 206.


LaTeX Warning: Reference `basicAMG' on page 144 undefined on input line 206.

[144] [52]

LaTeX Warning: Citation `Nocedal1980' on page 53 undefined on input line 215.

(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsptm.fd) [53] [145

LaTeX Warning: Citation `Nocedal2006' on page 54 undefined on input line 256.


LaTeX Warning: Citation `MoreThuente1992' on page 54 undefined on input line 25
7.

)] [54]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CostFunctions.tex
Chapter 8.
[55]

LaTeX Warning: Citation `ESCRIPT' on page 56 undefined on input line 83.

[56] [57] [58]
Underfull \hbox (badness 10000) in paragraph at lines 266--271


Overfull \hbox (0.87425pt too wide) in paragraph at lines 278--279
[]\OT1/pcr/m/n/10 "Elasticity-2D" and "Elasticity-3D"\OT1/ptm/m/n/10 : us-ing s
moothed ag-gre-ga-tion, Cheby-shev smoother and
[146] [59]) [60]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/DataSources.tex
Chapter 9.
[61 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inve
rsion/figures/domainbuilder.pdf>] [62]

LaTeX Warning: Citation `ESCRIPT' on page 63 undefined on input line 158.

[63]

LaTeX Warning: Citation `ERMAPPER' on page 64 undefined on input line 277.

[64] [147

LaTeX Warning: Citation `NETCDF' on page 65 undefined on input line 318.


LaTeX Warning: Citation `matplotlib' on page 65 undefined on input line 328.

[65]]) [66]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Regularization.tex>]
Chapter 10.

LaTeX Warning: Citation `GALLARDO2005a' on page 67 undefined on input line 28.

[67] [68]) [69]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Mapping.tex [70]
Chapter 11.
[71]) [72]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardModels.tex
Chapter 12.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardGravity.tex [148]
Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88
\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for
 the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th
e []

LaTeX Warning: Reference `fig:anticlinetemp' on page 42 undefined on input line
 127.

[42] [73 [43pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.5}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.134 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/heatrefraction.png] [74])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardMagnetic.tex

LaTeX Warning: Citation `IGRF' on page 75 undefined on input line 34.


LaTeX Warning: Citation `AGRF' on page 75 undefined on input line 35.

[75] [76] [77>]])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardMagneticIntensity.tex [78])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardSelfMagnetic.tex [79

LaTeX Warning: Reference `simplebob' on page 149 undefined on input line 422.


LaTeX Warning: Reference `complicatedbob' on page 149 undefined on input line 4
36.


Overfull \hbox (63.16116pt too wide) in paragraph at lines 454--455
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 

Overfull \hbox (3.76056pt too wide) in paragraph at lines 464--465
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][] 

Overfull \hbox (63.16116pt too wide) in paragraph at lines 466--467
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 
[149]]

LaTeX Warning: Citation `Lelievre2006a' on page 80 undefined on input line 21.

[80
Underfull \hbox (badness 10000) in paragraph at lines 137--142


LaTeX Warning: Reference `figs:dps' on page 44 undefined on input line 179.

[44]] [45pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.6}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.199 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/heatrefractiontdp.png) [150]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sym
bolic.tex [81])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Forward2DMTTEMode.tex

LaTeX Warning: Citation `chave2012magnetotelluric' on page 82 undefined on inpu
t line 18.

[82]
Chapter 12.

LaTeX Warning: Citation `Sympy' on page 151 undefined on input line 20.


Underfull \vbox (badness 10000) has occurred while \output is active [151] [83])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardDCRES.tex

LaTeX Warning: Citation `rucker2006three' on page 84 undefined on input line 32
.

[84]> </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/heatrefractiontgdp.pn
g

LaTeX Warning: Citation `LOKE2014' on page 85 undefined on input line 62.

[85]

LaTeX Warning: Citation `LOKE2014' on page 86 undefined on input line 124.

)) [86]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.ind

LaTeX Warning: Reference `symbolic eq1' on page 152 undefined on input line 72.



LaTeX Warning: Reference `symbolic eq1' on page 152 undefined on input line 74.



LaTeX Warning: Reference `symbolic eq1' on page 152 undefined on input line 75.



LaTeX Warning: Reference `SEC LinearPDE' on page 152 undefined on input line 80
.


LaTeX Warning: Reference `symbolic eq2' on page 152 undefined on input line 87.


[152 [87]]) [88]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.bbl [89]) [90]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/intro.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookGravity.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookMagnetic.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookJointDUMMY.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookDcRes.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/IntroPart2.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Domains.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Minimization.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CostFunctions.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/DataSources.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Regularization.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Mapping.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardModels.aux))

Package rerunfilecheck Warning: File `inversion.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Warning: There were undefined references.


LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.

 )
(see the transcript file for additional information){/usr/share/texlive/texmf-d
ist/fonts/enc/dvips/base/8r.enc}

LaTeX Warning: Reference `isovsaniso' on page 153 undefined on input line 185.


LaTeX Warning: `!h' float specifier changed to `!ht'.

[153</usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmbx10.pfb>> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookb
ook/figures/heatrefractiontcdp.png</usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmbx5.pfb]></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmbx7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmex1
0.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cmextra/cmex7.
pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/sha
re/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi6.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi7.pfb></usr/share/texlive/tex
mf-dist/fonts/type1/public/amsfonts/cm/cmmi8.pfb [154 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/user/figures/0RotAniso.png></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/
type1/public/amsfonts/cm/cmr5.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmr6.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm
/cmr8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.
pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></u
sr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy7.pfb></usr/shar
e/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy8.pfb></usr/share/texli
ve/texmf-dist/fonts/type1/urw/courier/ucrb8a.pfb></usr/share/texlive/texmf-dist
/fonts/type1/urw/courier/ucrr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/
urw/courier/ucrro8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic
/uhvb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb></usr/share
/texlive/texmf-dist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-
dist/fonts/type1/urw/times/utmb8a.pfb> </<<PKGBUILDDIR>>
/debian/tmp3/posix/doc/user/figures/0RotIso.png></usr/share/texlive/texmf-dist/fonts/type
1/urw/times/utmr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utm
r8a.pfb> </<<BUILDDIR>>/python-escrip
t-5.5/debian/tmp3/posix/doc/cookbook/figures/heatrefractionhf.png></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
Output written on inversion.pdf (90 pages, 5272524 bytes).
Transcript written on inversion.log.
cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex
> </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/user/figures/MidRotAniso.pngThis is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
> </build/
python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Mid
RotIso.pngentering extended mode
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/esysdoc.cls
Document Class: esysdoc 
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))

Package geometry Warning: Over-specification in `h'-direction.
    `width' (478.00812pt) is ignored.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty> </<<PKGBUILDDIR>>/debian/tmp3/posix/
doc/user/figures/diffaniso.png
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty>])
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) [155]) [156)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sub
worlds.tex)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty

LaTeX Warning: Reference `fig:hr001qumodel' on page 46 undefined on input line 
204.


Underfull \hbox (badness 10000) in paragraph at lines 202--209


LaTeX Warning: Reference `Sec:2DHD plot' on page 46 undefined on input line 210
.


Overfull \hbox (5.0533pt too wide) in paragraph at lines 210--216
[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion []. To sho
w sub-domains, we need to go back to []

LaTeX Warning: Reference `fig:hr001qumodel' on page 46 undefined on input line 
284.

[46)
(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty]) [47pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.7}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.291 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/heatrefractionflux.png
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)
Chapter 13.
[157
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty])
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty

LaTeX Warning: Reference `splitworldClass' on page 158 undefined on input line 
82.

[158)])
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty [159
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty])))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) [160])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/app
endix.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/not
ation.tex
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
Appendix A.
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cha
nges.tex
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) [161)]
\@input{elist.aux}

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/elist.tex [162] (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty
Package `listing', V1.2, <1999/05/25>
)) (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty
Appendix B.
[163]
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) [164
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)]
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd))
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty [165]
****************************************
* Local config file subfigure.cfg used *
****************************************
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/defs.tex)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/verinfo.tex)
Writing index file inversion.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/intro.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookGravity.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookMagnetic.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookJointDUMMY.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookDcRes.aux) [166
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/IntroPart2.aux)]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Domains.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Minimization.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CostFunctions.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/DataSources.aux) [167
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Regularization.aux)]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Mapping.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardModels.aux)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd


LaTeX Warning: Reference `sec:interpolation' on page 168 undefined on input lin
e 216.

[168)]

LaTeX Warning: Reference `sec:lazy' on page 169 undefined on input line 272.


LaTeX Warning: Reference `sec:savedatacsv' on page 169 undefined on input line 
277.

[169])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/com
pletedevs.tex [170]
Appendix C.
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/our
refs.tex [171] [172]
Appendix D.
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))>])
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)

LaTeX Warning: Reference `fig:hr002qumodel' on page 48 undefined on input line 
297.


Underfull \hbox (badness 10000) in paragraph at lines 294--299

[48
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd)pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.305 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/heatrefraction2flux.png)
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/docguide.tex [2]) [3] [4]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.toc [5]) [6]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/intro.tex) [173 [7]] [8] [9] [10)]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/py3
.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookGravity.tex [174]
Appendix E.
)) [175] [176]
No file user.ind.
No file user.bbl.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Tut
orialPDE.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/exe
cute.aux)
Chapter 1.

Underfull \hbox (badness 10000) in paragraph at lines 54--54
[]\OT1/ptm/m/n/10 Figure 1.1: Grav-ity Anomaly Data in $\OML/cmm/m/it/10 mgal$ 
\OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file

Underfull \hbox (badness 10000) in paragraph at lines 65--65
[]\OT1/ptm/m/n/10 Figure 1.2: 3-D con-tour plot of the den-sity dis-tri-bu-tion
 ob-tained by in-ver-sion of file
[11
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esc
ript.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lin
earPDE.aux)]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/pyc
ad.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Mod
els.aux (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
ley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/rip
ley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/spe
ckley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wei
pa.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/tri
linos.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sym
bolic.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sub
worlds.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/app
endix.aux))

Package rerunfilecheck Warning: File `user.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Warning: There were undefined references.


LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.

 )
(see the transcript file for additional information){/usr/share/texlive/texmf-d
ist/fonts/enc/dvips/base/8r.enc}</usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmbx10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmbx8.pfb)></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmex10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cmextra
/cmex8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi6.pfb></usr/sha
re/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi7.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi8.pfb></usr/share/texlive/tex
mf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pfb></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/
type1/public/amsfonts/cm/cmr5.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmr6.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm
/cmr8.pfb [12></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pf
b </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figu
res/QLDWestGravityDataPlot.png></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></us
r/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share
/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy7.pfb></usr/share/texliv
e/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy8.pfb></usr/share/texlive/texmf
-dist/fonts/type1/public/amsfonts/cm/cmsy9.pfb></usr/share/texlive/texmf-dist/f
onts/type1/public/amsfonts/latxfont/lcircle1.pfb></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/latxfont/lcirclew.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/latxfont/line10.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/latxfont/linew10.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/symbols/msam7.pfb></usr/share/texlive/texmf-dis
t/fonts/type1/public/amsfonts/symbols/msbm10.pfb></usr/share/texlive/texmf-dist
/fonts/type1/urw/courier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/
urw/courier/ucrr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/u
crro8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb><
/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb></usr/share/texlive/texm
f-dist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/ty
pe1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/u
tmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb></us
r/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb></usr/share/texlive
/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
Output written on user.pdf (176 pages, 2593386 bytes).
Transcript written on user.log.
cd debian/tmp3/posix/doc/user && bibtex elist
>])
Chapter 5.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example07.texThis is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: elist.aux
I found no \citation commands---while reading file elist.aux
I found no \bibdata command---while reading file elist.aux
I found no \bibstyle command---while reading file elist.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/user && bibtex user


LaTeX Warning: Reference `eqn:laplacian' on page 49 undefined on input line 41.



LaTeX Warning: Reference `eqn:grad' on page 49 undefined on input line 72.


LaTeX Warning: Reference `eqn:gradrank1' on page 49 undefined on input line 79.


[49]
Underfull \hbox (badness 10000) in paragraph at lines 154--155


Underfull \hbox (badness 10000) in paragraph at lines 154--155


LaTeX Warning: Reference `eqn:centdiff' on page 50 undefined on input line 162.



LaTeX Warning: Reference `eqn:acswave' on page 50 undefined on input line 163.

[50]>]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: user.aux
A level-1 auxiliary file: TutorialPDE.aux
A level-1 auxiliary file: execute.aux
A level-1 auxiliary file: escript.aux
A level-1 auxiliary file: linearPDE.aux
A level-1 auxiliary file: pycad.aux
A level-1 auxiliary file: Models.aux
A level-1 auxiliary file: finley.aux
A level-1 auxiliary file: ripley.aux
A level-1 auxiliary file: speckley.aux
A level-1 auxiliary file: weipa.aux
A level-1 auxiliary file: trilinos.aux
A level-1 auxiliary file: symbolic.aux
A level-1 auxiliary file: subworlds.aux
A level-1 auxiliary file: appendix.aux
The style file: plain.bst
Database file #1: esys.bib
 [13 </<<BUILDDIR>>/python-escri
pt-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravContourMu10.png (PNG copy
)>]cd debian/tmp3/posix/doc/user && bibtex user
 [14] [15 </<<PKGBUILDDIR>>/debian/tmp3/posix
/doc/inversion/figures/dom2D.pdf> </<<BUILDDIR>>/python-escript-
5.5/debian/tmp3/posix/doc/inversion/figures/dom2DFEM.pdf

pdfTeX warning: pdflatex (file /<<PKGBUILDDIR>>/
debian/tmp3/posix/doc/inversion/figures/dom2DFEM.pdf): PDF inclusion: multiple 
pdfs with page group included in a single page
>]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: user.aux
A level-1 auxiliary file: TutorialPDE.aux
A level-1 auxiliary file: execute.aux
A level-1 auxiliary file: escript.aux
A level-1 auxiliary file: linearPDE.aux
A level-1 auxiliary file: pycad.aux
A level-1 auxiliary file: Models.aux
A level-1 auxiliary file: finley.aux
A level-1 auxiliary file: ripley.aux
A level-1 auxiliary file: speckley.aux
A level-1 auxiliary file: weipa.aux
A level-1 auxiliary file: trilinos.aux
A level-1 auxiliary file: symbolic.aux
A level-1 auxiliary file: subworlds.aux
A level-1 auxiliary file: appendix.aux
The style file: plain.bst
Database file #1: esys.bib
 (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fdcd debian/tmp3/posix/doc/user && bibtex TutorialPDE
) [16]

LaTeX Warning: Reference `fig:cxsource' on page 51 undefined on input line 241.


[51] [17]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: TutorialPDE.aux
I found no \bibdata command---while reading file TutorialPDE.aux
I found no \bibstyle command---while reading file TutorialPDE.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/user && bibtex execute

[18]
Underfull \hbox (badness 10000) in paragraph at lines 279--280


Underfull \hbox (badness 10000) in paragraph at lines 279--280

[52This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: execute.aux
I found no \bibdata command---while reading file execute.aux
I found no \bibstyle command---while reading file execute.aux
(There were 2 error messages)
pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.280 
       </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/c
ookbook/figures/sourceline.pngbibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/user && bibtex escript
 [19] [20 </<<PKGBUILDDIR>>/debian/tmp3/posi
x/doc/inversion/figures/QLDGravContourMu01.png (PNG copy)> </build/python-escri
pt-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravCon
tourMu1.png (PNG copy)> </<<PKGBUILDDIR>>/debian
/tmp3/posix/doc/inversion/figures/QLDGravContourMu100.png (PNG copy)> </build/p
ython-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures
/QLDGravContourMu1000.png (PNG copy)>This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: escript.aux
I found no \bibdata command---while reading file escript.aux
I found no \bibstyle command---while reading file escript.aux
(There were 2 error messages)
]bibtex returned an error, check the blg file
 [21cd debian/tmp3/posix/doc/user && bibtex linearPDE
 </<<BUILDDIR>>/python
-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepthMu01.png (PNG 
copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/i
nversion/figures/QLDGravDepthMu1.png (PNG copy)> </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepthMu10.png
 (PNG copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix
/doc/inversion/figures/QLDGravDepthMu100.png (PNG copy)> </build/python-escript
-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepth
Mu1000.png (PNG copy)>] [22 </<<PKGBUILDDIR>>/de
bian/tmp3/posix/doc/inversion/figures/onshore-offshore.png>]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: linearPDE.aux
I found no \bibdata command---while reading file linearPDE.aux
I found no \bibstyle command---while reading file linearPDE.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/user && bibtex pycad


LaTeX Warning: Reference `eqn:waveu' on page 53 undefined on input line 284.


LaTeX Warning: Reference `sec:nsstab' on page 53 undefined on input line 326.


LaTeX Warning: Reference `eqn:samptheorem' on page 53 undefined on input line 3
33.


LaTeX Warning: Reference `fig:ex07sampth' on page 53 undefined on input line 33
5.

[53]) [54pdfTeX warning (ext4): destination with the same identifier (name{figu
re.5.2}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.122 \chapter
              {Seismic Wave Propagation} </<<BUILDDIR>>/python-e
script-5.5/debian/tmp3/posix/doc/cookbook/figures/ex07usamp.png (PNG copy)> </b
uild/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/fi
gures/ex07jsamp.png (PNG copy)> </<<BUILDDIR>>/python-escript-5.
5/debian/tmp3/posix/doc/cookbook/figures/ex07nsamp.png (PNG copy)>]
Chapter 6.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example08.texThis is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: pycad.aux
I found no \bibdata command---while reading file pycad.aux
I found no \bibstyle command---while reading file pycad.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/user && bibtex Models
This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: Models.aux
I found no \bibdata command---while reading file Models.aux
I found no \bibstyle command---while reading file Models.aux
(There were 2 error messages)
bibtex returned an error, check the blg file

Underfull \hbox (badness 10000) in paragraph at lines 18--24


LaTeX Warning: Reference `eqn:wav' on page 55 undefined on input line 40.


LaTeX Warning: Reference `eqn:sigtrace' on page 55 undefined on input line 59.


LaTeX Warning: Reference `eqn:sigtrans' on page 55 undefined on input line 62.

[55cd debian/tmp3/posix/doc/user && bibtex finley
]>]) [23]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: finley.aux
I found no \bibdata command---while reading file finley.aux
I found no \bibstyle command---while reading file finley.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/user && bibtex ripley

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookMagnetic.tex [24]

LaTeX Warning: Reference `tab:wpcores' on page 56 undefined on input line 116.


Underfull \hbox (badness 10000) in paragraph at lines 139--145

[56pdfTeX warning (ext4): destination with the same identifier (name{table.6.1}
) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.153 #
       ###########################################FIRST TIME STEPS AND SOURCE]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: ripley.aux
I found no \citation commands---while reading file ripley.aux
I found no \bibdata command---while reading file ripley.aux
I found no \bibstyle command---while reading file ripley.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/user && bibtex speckley

Chapter 2.

Underfull \hbox (badness 10000) in paragraph at lines 7--7
[]\OT1/ptm/m/n/10 Figure 2.1: Mag-netic anomaly data in $\OML/cmm/m/it/10 nT$ \
OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file
[25] [26 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/inversion/figures/QLDWestMagneticDataPlot.pngThis is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: speckley.aux
I found no \citation commands---while reading file speckley.aux
I found no \bibdata command---while reading file speckley.aux
I found no \bibstyle command---while reading file speckley.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/user && bibtex weipa

[57] [58pdfTeX warning (ext4): destination with the same identifier (name{figur
e.6.1}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.214 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex08pw50.png (PNG copy)> </build/python-escript-rg4Iy
W/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08pw350.png (PNG 
copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/c
ookbook/figures/ex08pw650.png (PNG copy)> </<<BUILDDIR>>/python-
escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08pw950.png (PNG copy)>]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: weipa.aux
I found no \bibdata command---while reading file weipa.aux
I found no \bibstyle command---while reading file weipa.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/user && bibtex trilinos
This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: trilinos.aux
I found no \bibdata command---while reading file trilinos.aux
I found no \bibstyle command---while reading file trilinos.aux
(There were 2 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/user && bibtex symbolic

Underfull \hbox (badness 10000) in paragraph at lines 218--223


LaTeX Warning: Reference `fig:tvsource' on page 59 undefined on input line 228.


[59This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: symbolic.aux
I found no \bibdata command---while reading file symbolic.aux
I found no \bibstyle command---while reading file symbolic.aux
(There were 2 error messages)
pdfTeX warning (ext4): destination with the same identifier (name{figure.6.2
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.273 t=
        t+h; n=n+1 </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/cookbook/figures/source.pngbibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/user && bibtex subworlds
> </<<BUILDDIR>>/p
ython-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagContourMu01.png
 (PNG copy)>]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: subworlds.aux
I found no \citation commands---while reading file subworlds.aux
I found no \bibdata command---while reading file subworlds.aux
I found no \bibstyle command---while reading file subworlds.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/user && bibtex appendix
)This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: appendix.aux
I found no \citation commands---while reading file appendix.aux
I found no \bibdata command---while reading file appendix.aux
I found no \bibstyle command---while reading file appendix.aux
(There were 3 error messages)
 [27bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/user && makeindex user.idx
] [28 </<<PKGBUILDDIR>>/debian
/tmp3/posix/doc/inversion/figures/QLDMagContourMu0001.png (PNG copy)> </build/p
ython-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures
/QLDMagContourMu001.png (PNG copy)> </<<BUILDDIR>>/python-escrip
t-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagContourMu1.png (PNG copy)> 
</<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/figures/QLDMagContourMu10.png (PNG copy)>] [29 </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagDepthMu0001.pn
g (PNG copy)> </<<PKGBUILDDIR>>/debian/tmp3/posi
x/doc/inversion/figures/QLDMagDepthMu001.png (PNG copy)> </build/python-escript
-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagDepthM
u01.png (PNG copy)> </<<PKGBUILDDIR>>/debian/tmp
3/posix/doc/inversion/figures/QLDMagDepthMu1.png (PNG copy)> </build/python-esc
ript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagDe
pthMu10.png (PNG copy)>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookJointDUMMY.tex [30]This is makeindex, version 2.15 [TeX Live 2019] (kpathsea + Thai support).
Scanning input file user.idx...
Chapter 3.
).done (716 entries accepted, 12 rejected).
Sorting entries..... [31>.]]..done (7122 comparisons).
Generating output file user.ind....
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookDcRes.texdone (353 lines written, 0 warnings).
Output written in user.ind.
Transcript written in user.ilg.
 [32]cd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.

Chapter 4.
[33]

Package natbib Warning: Citation `Cerjan1985' on page 60 undefined on input lin
e 293.

[60]entering extended mode
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esy
sdoc.cls
Document Class: esysdoc 
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo [34) </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/inversion/figures/HalfSphere.png

LaTeX Warning: Reference `fig:abconds' on page 61 undefined on input line 347.

[61)pdfTeX warning (ext4): destination with the same identifier (name{figure.6.3
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.392 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex08babc.png
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))

Package geometry Warning: Over-specification in `h'-direction.
    `width' (478.00812pt) is ignored.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.stye_getNormal.cpp...
Parsing code for file Assemble_getSize.cpp...
Parsing code for file Assemble_getSize.cpp...
Parsing code for file Assemble_gradient.cpp...
Parsing code for file Assemble_gradient.cpp...
Parsing code for file Assemble_integrate.cpp...
Parsing code for file Assemble_integrate.cpp...
Parsing code for file Assemble_interpolate.cpp...
Parsing code for file Assemble_interpolate.cpp...
Parsing code for file Assemble_jacobians.cpp...
Parsing code for file Assemble_jacobians.cpp...
Parsing code for file Assemble_LumpedSystem.cpp...
Parsing code for file Assemble_LumpedSystem.cpp...
Parsing code for file Assemble_NodeCoordinates.cpp...
Parsing code for file Assemble_NodeCoordinates.cpp...
Parsing code for file Assemble_PDE.cpp...
Parsing code for file Assemble_PDE.cpp...
Parsing code for file Assemble_PDE_Points.cpp...
Parsing code for file Assemble_PDE_Points.cpp...
Parsing code for file Assemble_PDE_Single_1D.cpp...
Parsing code for file Assemble_PDE_Single_2D.cpp...
Parsing code for file Assemble_PDE_Single_2D.cpp...
Parsing code for file Assemble_PDE_Single_3D.cpp...
Parsing code for file Assemble_PDE_Single_3D.cpp...
Parsing code for file Assemble_PDE_Single_C.cpp...
Parsing code for file Assemble_PDE_System_1D.cpp...
Parsing code for file Assemble_PDE_System_2D.cpp...
Parsing code for file Assemble_PDE_System_2D.cpp...
Parsing code for file Assemble_PDE_System_3D.cpp...
Parsing code for file Assemble_PDE_System_3D.cpp...
Parsing code for file Assemble_PDE_System_C.cpp...
Generating code for file Assert.h...
Parsing code for file BiCGStab.cpp...
Parsing code for file BinaryDataReadyOps.cpp...
Generating code for file BinaryDataReadyOps.h...
Generating code for file BlockOps.h...
Parsing code for file blocktools.cpp...
Generating code for file blocktools.h...
Parsing code for file blocktools2.cpp...
Parsing code for file Brick.cpp...
Parsing code for file Brick.cpp...
Generating code for file Brick.h...
Generating code for file Brick.h...
Parsing code for file BrickGradients.cpp...
Parsing code for file BrickIntegrals.cpp...
Parsing code for file BrickReductions.cpp...
Parsing code for file Coupler.cpp...
Generating code for file Coupler.h...
Parsing code for file CrossDomainCoupler.cpp...
Generating code for file CrossDomainCoupler.h...
Parsing code for file Data.cpp...
Generating code for file Data.h...
Parsing code for file DataAbstract.cpp...
Generating code for file DataAbstract.h...
Parsing code for file DataConstant.cpp...
Generating code for file DataConstant.h...
Parsing code for file DataEmpty.cpp...
Generating code for file DataEmpty.h...
Generating code for file DataException.h...
Parsing code for file DataExpanded.cpp...
Generating code for file DataExpanded.h...
Parsing code for file DataFactory.cpp...
Generating code for file DataFactory.h...
Parsing code for file DataLazy.cpp...
Generating code for file DataLazy.h...
Parsing code for file DataReady.cpp...
Generating code for file DataReady.h...
Parsing code for file DataTagged.cpp...
Generating code for file DataTagged.h...
Parsing code for file DataTypes.cpp...
Generating code for file DataTypes.h...
Parsing code for file DataVar.cpp...
Generating code for file DataVar.h...
Parsing code for file DataVector.cpp...
Generating code for file DataVector.h...
Parsing code for file DataVectorAlt.cpp...
Generating code for file DataVectorAlt.h...
Parsing code for file DataVectorOps.cpp...
Generating code for file DataVectorOps.h...
Parsing code for file DataVectorTaipan.cpp...
Generating code for file DataVectorTaipan.h...
Parsing code for file DefaultAssembler2D.cpp...
Parsing code for file DefaultAssembler2D.cpp...
Generating code for file DefaultAssembler2D.h...
Generating code for file DefaultAssembler2D.h...
Parsing code for file DefaultAssembler3D.cpp...
Parsing code for file DefaultAssembler3D.cpp...
Generating code for file DefaultAssembler3D.h...
Generating code for file DefaultAssembler3D.h...
Generating code for file Distribution.h...
Parsing code for file Dodgy.cpp...
Generating code for file Dodgy.h...
Generating code for file DomainChu)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)>]
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def [62pdfTeX warning (ext4): destination 
with the same identifier (name{figure.6.4}) has been already used, duplicate ig
nored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.392 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex08sw060.png (PNG copy)> </build/python-escript-rg4I
yW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08sw320.png (PNG
 copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/
cookbook/figures/ex08sw660.png (PNG copy)> </<<BUILDDIR>>/python
-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08sw880.png (PNG copy)>])))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
Underfull \hbox (badness 10000) in paragraph at lines 395--399


LaTeX Warning: Reference `fig:ex08cres' on page 63 undefined on input line 430.


) [63pdfTeX warning (ext4): destination with the same identifier (name{figure.6
.5}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.125 \chapter
              {3D Seismic Wave Propagation} </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/gmsh-example08c.png (PNG c
opy)>] [64pdfTeX warning (ext4): destination with the same identifier (name{fig
ure.6.6}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.125 \chapter
              {3D Seismic Wave Propagation} </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08c2601.png (PNG copy)>]
Chapter 7.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example09.tex)
(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty>]))
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty [35]
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty) [36])
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty [37]) [38]
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/IntroPart2.tex)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty
Chapter 5.
[39)]
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Drivers.tex [40 </<<PKGBUILDDIR>>/debian/tmp3/
posix/doc/inversion/figures/classdep.pdf>])
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
Underfull \hbox (badness 10000) in paragraph at lines 17--21

[65]
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) [41] [42
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty]
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)))) [43]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Domains.tex [44]
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
Chapter 6.
[45]
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty [46 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/inversion/figures/cartesian.pdf [66
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))])
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty>])
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) [47 [67]
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty </<<BUILDDIR>>/python-esc
ript-5.5/debian/tmp3/posix/doc/inversion/figures/geosphir.png [68 </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/cookbook/figures/gmsh-example09m.png (PNG copy)> </build/python-escr
ipt-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/gmsh-examp
le09msh2d.png (PNG copy)> </<<PKGBUILDDIR>>/debi
an/tmp3/posix/doc/cookbook/figures/gmsh-example09msh3d.png (PNG copy)>]))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r_defs.tex (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty
****************************************
* Local config file subfigure.cfg used *
****************************************
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))
[69pdfTeX warning (ext4): destination with the same identifier (name{figure.7.1
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.186 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/gmsh-example09lc.png (PNG copy)>]
(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty)
\@input{elist.aux}

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/eli
st.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty
Package `listing', V1.2, <1999/05/25>
))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/ver
info.tex)
Writing index file user.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Tut
orialPDE.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/exe
cute.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esc
ript.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lin
earPDE.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/pyc
ad.aux)
Underfull \hbox (badness 10000) in paragraph at lines 202--209


Overfull \hbox (25.36078pt too wide) in paragraph at lines 222--223
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Mod
els.aux [70])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
ley.aux [71 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/cookbook/figures/ex09b00201.png (PNG copy)> </<<BUILDDIR>>/py
thon-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex09b00341.png (PNG cop
y))> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cook
book/figures/ex09b00440.png (PNG copy)>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/rip
ley.aux) [72]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/spe
ckley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wei
pa.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/tri
linos.aux
Chapter 8.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example10.tex)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sym
bolic.aux)>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sub
worlds.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/app
endix.aux)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)

Package natbib Warning: Citation `Blakely1995' on page 73 undefined on input li
ne 27.


LaTeX Warning: Reference `eqn:poisson' on page 73 undefined on input line 33.


LaTeX Warning: Reference `eqn:ex10a' on page 73 undefined on input line 42.


LaTeX Warning: Reference `eqn:poisson' on page 73 undefined on input line 46.

[73] [74
Underfull \hbox (badness 10000) in paragraph at lines 261--261
[][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t
ion can be sup-ported by build-ing sub-classes of the
[48]]
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty [49])
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)
Underfull \hbox (badness 10000) in paragraph at lines 93--97


LaTeX Warning: Reference `fig:mayavi2openfile' on page 75 undefined on input li
ne 132.


LaTeX Warning: Reference `fig:mayavi2data' on page 75 undefined on input line 1
35.


LaTeX Warning: Reference `fig:mayavi2cell2point' on page 75 undefined on input 
line 143.


LaTeX Warning: Reference `fig:ex10pot' on page 75 undefined on input line 147.

[75 [50])]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Minimization.tex [76pdfTeX warning (ext4): destination with the same identifier (name{figur
e.8.1}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.177 \clearpage
                pdfTeX warning (ext4): destination with the same identifier (na
me{figure.8.2}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.177 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/mayavi2_openfile.png
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty
Chapter 7.
[51)])
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) [52] [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsptm.fd)}]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cop
yrights.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) [53]
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/doc
guide.tex [2])
[54])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CostFunctions.tex [3] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)
Chapter 8.
[55]
[4]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cur
rentdev.tex [5]) [6]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.toc [56] [7 [57]] [58 [8]] [59> </<<BUILDDIR>>/p
ython-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/mayavi2_data.png]) [60 [9]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/DataSources.tex]) [10]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Tut
orialPDE.tex
Chapter 9.
[61 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inve
rsion/figures/domainbuilder.pdf>]
Chapter 1.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fir
ststep.tex [62] [63] [11 [64 </<<PKGBUILDDIR>>/debian/tmp3/pos
ix/doc/user/figures/FirstStepDomain.pdf>]] [65]

LaTeX Warning: Reference `Zienc,NumHand' on page 12 undefined on input line 148
.

[12)] [66]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Regularization.tex (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty
Chapter 10.
[67] [68]) [69]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Mapping.tex [70])
Chapter 11.
[71]>])
[77 [72pdfTeX warning (ext4): destination with the same identifier (name{figure.8.3
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.177 \clearpage
                pdfTeX warning (ext4): destination with the same identifier (na
me{figure.8.4}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.177 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/mayavi2_cell2point.png]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardModels.tex
Chapter 12.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardGravity.tex [13 [73 </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/F
irstStepMesh.pdf>]] [74])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardMagnetic.tex [75] [76] [77])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardMagneticIntensity.tex [78])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardSelfMagnetic.tex [79] [80] [81 [14]])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Forward2DMTTEMode.tex [82] [83])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardDCRES.tex [84]> </<<BUILDDIR>>
/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10apot.png (PNG co
py)>] [85])) [86]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.ind

LaTeX Warning: Citation `matplotlib' on page 15 undefined on input line 312.


LaTeX Warning: Citation `mayavi' on page 15 undefined on input line 317.


LaTeX Warning: Citation `VisIt' on page 15 undefined on input line 317.

[15 [87]]) [88]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.bbl
Underfull \hbox (badness 10000) in paragraph at lines 180--184


LaTeX Warning: Reference `fig:ex10bpot' on page 78 undefined on input line 205.



LaTeX Warning: Reference `fig:ex10bpot2' on page 78 undefined on input line 215
.


LaTeX Warning: Reference `fig:ex10p' on page 78 undefined on input line 218.

[78] [79pdfTeX warning (ext4): destination with the same identifier (name{figur
e.8.5}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.246 \clearpage
                pdfTeX warning (ext4): destination with the same identifier (na
me{figure.8.6}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.246 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10bpot.png (PNG copy)> </build/python-escript-rg4Iy
W/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10bpot2.png (PNG 
copy)>] [80pdfTeX warning (ext4): destination with the same identifier (name{fi
gure.8.7}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.246 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10p_boundeff.pdf>] [89]) [90]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/inversion.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/intro.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookGravity.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookMagnetic.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookJointDUMMY.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CookDcRes.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/IntroPart2.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Domains.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Minimization.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/CostFunctions.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/DataSources.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Regularization.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/Mapping.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
n/ForwardModels.aux))

Package rerunfilecheck Warning: File `inversion.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.

 )
(see the transcript file for additional information){/usr/share/texlive/texmf-d
ist/fonts/enc/dvips/base/8r.enc}</usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmbx10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmbx5.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmbx7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmex1
0.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cmextra/cmex7.
pfb [16></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/user/figures/FirstStepResultMATPLOTLIB.pdf>]></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/sha
re/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi6.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi7.pfb></usr/share/texlive/tex
mf-dist/fonts/type1/public/amsfonts/cm/cmmi8.pfb
Underfull \hbox (badness 10000) in paragraph at lines 275--281

[81></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/cm/cmr10.pfb>]</usr/share/texlive/texmf-dist/fonts/
type1/public/amsfonts/cm/cmr5.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmr6.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm
/cmr8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.
pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></u
sr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy7.pfb></usr/shar
e/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy8.pfb></usr/share/texli
ve/texmf-dist/fonts/type1/urw/courier/ucrb8a.pfb></usr/share/texlive/texmf-dist
/fonts/type1/urw/courier/ucrr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/
urw/courier/ucrro8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic
/uhvb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb></usr/share
/texlive/texmf-dist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-
dist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type
1/urw/times/utmr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utm
r8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>

LaTeX Warning: Citation `matplotlib' on page 17 undefined on input line 408.


LaTeX Warning: Citation `mayavi' on page 17 undefined on input line 426.


LaTeX Warning: Citation `VisIt' on page 17 undefined on input line 426.

[17 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/FirstStepResult.pdf>]nk.h...
Generating code for file DomainException.h...
Parsing code for file DomainFactory.cpp...
Parsing code for file DomainFactory.cpp...
Generating code for file DomainFactory.h...
Generating code for file DomainFactory.h...
Parsing code for file domainhelpers.cpp...
Parsing code for file domainhelpers.cpp...
Generating code for file domainhelpers.h...
Generating code for file domainhelpers.h...
Generating code for file Dudley.h...
Parsing code for file dudleycpp.cpp...
Parsing code for file DudleyDomain.cpp...
Generating code for file DudleyDomain.h...
Generating code for file DudleyException.h...
Generating code for file DudleyVersion.h...
Generating code for file ElementData.h...
Parsing code for file ElementFile.cpp...
Parsing code for file ElementFile.cpp...
Generating code for file ElementFile.h...
Generating code for file ElementFile.h...
Parsing code for file ElementFile_createColoring.cpp...
Parsing code for file ElementFile_distributeByRankOfDOF.cpp...
Parsing code for file ElementFile_jacobians.cpp...
Parsing code for file ElementFile_jacobians.cpp...
Generating code for file ElementType.h...
Parsing code for file ES_optype.cpp...
Generating code for file ES_optype.h...
Parsing code for file escriptcpp.cpp...
Parsing code for file EscriptDataset.cpp...
Generating code for file EscriptDataset.h...
Parsing code for file EscriptParams.cpp...
Generating code for file EscriptParams.h...
Generating code for file EsysException.h...
Parsing code for file EsysMPI.cpp...
Generating code for file EsysMPI.h...
Parsing code for file ExceptionTranslators.cpp...
Generating code for file ExceptionTranslators.h...
Parsing code for file FCT_Solver.cpp...
Generating code for file FCT_Solver.h...
Generating code for file FileWriter.h...
Generating code for file Finley.h...
Parsing code for file finleycpp.cpp...
Parsing code for file FinleyDomain.cpp...
Parsing code for file FinleyDomain.cpp...
Generating code for file FinleyDomain.h...
Generating code for file FinleyDomain.h...
Parsing code for file FinleyElements.cpp...
Generating code for file FinleyElements.h...
Generating code for file FinleyException.h...
Parsing code for file FinleyNodes.cpp...
Generating code for file FinleyNodes.h...
Generating code for file FinleyVersion.h...
Parsing code for file FluxLimiter.cpp...
Generating code for file FluxLimiter.h...
Parsing code for file Functions.cpp...
Generating code for file Functions.h...
Parsing code for file FunctionSpace.cpp...
Generating code for file FunctionSpace.h...
Generating code for file FunctionSpaceException.h...
Parsing code for file FunctionSpaceFactory.cpp...
Generating code for file FunctionSpaceFactory.h...
Parsing code for file GMRES.cpp...
Parsing code for file GMRES2.cpp...
Parsing code for file ILU.cpp...
Generating code for file index.h...
Parsing code for file IndexList.cpp...
Parsing code for file IndexList.cpp...
Generating code for file IndexList.h...
Generating code for file IndexList.h...
Generating code for file IndexList.h...
Generating code for file lagrange_functions.h...
Parsing code for file LameAssembler2D.cpp...
Generating code for file LameAssembler2D.h...
Parsing code for file LameAssembler3D.cpp...
Generating code for file LameAssembler3D.h...
Parsing code for file LapackInverseHelper.cpp...
Generating code for file LapackInverseHelper.h...
Parsing code for file Mesh_addPoints.cpp...
Parsing code for file Mesh_distributeByRankOfDOF.cpp...
Parsing code for file Mesh_findMatchingFaces.cpp...
Parsing code for file Mesh_getPasoPattern.cpp...
Parsing code for file Mesh_getPattern.cpp...
Parsing code for file Mesh_getTrilinosGraph.cpp...
Parsing code for file Mesh_glueFaces.cpp...
Parsing code for file Mesh_hex20.cpp...
Parsing code for file Mesh_hex8.cpp...
Parsing code for file Mesh_joinFaces.cpp...
Parsing code for file Mesh_merge.cpp...
Parsing code for file Mesh_optimizeDOFDistribution.cpp...
Parsing code for file Mesh_optimizeDOFDistribution.cpp...
Parsing code for file Mesh_optimizeDOFLabeling.cpp...
Parsing code for file Mesh_read.cpp...
Parsing code for file Mesh_read.cpp...
Pars
Output written on inversion.pdf (90 pages, 5274148 bytes).
Transcript written on inversion.log.
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dif
fusion.tex

LaTeX Warning: Reference `fig:ex10mgeo' on page 82 undefined on input line 348.



LaTeX Warning: Reference `fig:ex10mmsh' on page 82 undefined on input line 379.


[82] [83pdfTeX warning (ext4): destination with the same identifier (name{figur
e.8.8}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.406 \clearpage
                pdfTeX warning (ext4): destination with the same identifier (na
me{figure.8.9}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.406 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10m_geo.png (PNG copy)> </build/python-escript-rg4I
yW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10m_msh.png (PNG
 copy)>] [18 </<<PKGBUILDDIR>>/debian/tmp3/pos
ix/doc/user/figures/DiffusionDomain.pdf>]Install file: "debian/tmp3/posix/doc/inversion/inversion.pdf" as "debian/stage3/release/doc/inversion/inversion.pdf"


LaTeX Warning: Reference `fig:ex10q boundeff' on page 84 undefined on input lin
e 427.


LaTeX Warning: Reference `fig:ex10q boundeff zoom' on page 84 undefined on inpu
t line 427.


LaTeX Warning: Reference `fig:ex10q boundeff' on page 84 undefined on input lin
e 443.

[84pdfTeX warning (ext4): destination with the same identifier (name{figure.8.1
0}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.449 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10q_boundeff.pdf>] [85pdfTeX warning (ext4): destin
ation with the same identifier (name{figure.8.11}) has been already used, dupli
cate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.449 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10q_boundeff_zoom.pdf>]) [86]
Chapter 9.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example11.tex [19]Mkdir("/<<PKGBUILDDIR>>/debian/stage3/release/doc/sphinx_api")


Package natbib Warning: Citation `Loke2004' on page 87 undefined on input line 
24.


Underfull \hbox (badness 10000) in paragraph at lines 61--62


Underfull \hbox (badness 10000) in paragraph at lines 61--62


Package natbib Warning: Citation `Farias2010' on page 87 undefined on input lin
e 73.


Package natbib Warning: Citation `Honig2007' on page 87 undefined on input line
 73.

)Mkdir("/<<PKGBUILDDIR>>/debian/tmp3/sphinx_int")

No file cookbook.bbl.

Package natbib Warning: There were undefined citations.

[87Touch("debian/stage3/esys/__init__.py")
] [88pdfTeX warning (ext4): destination with the same identifier (name{figur
e.9.1}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.141 \end{document}
                     </<<PKGBUILDDIR>>/debian/tm
p3/posix/doc/cookbook/figures/ex11cstreamline.png (PNG copy)>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook.aux)

Package rerunfilecheck Warning: File `cookbook.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Warning: There were undefined references.


LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.

 )
(see the transcript file for additional information)pdfTeX warning (dest): name
{Hfootnote.36} has been referenced but does not exist, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.35} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.34} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.33} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.32} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.31} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.30} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.29} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.28} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.27} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.26} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.25} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.24} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.23} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.22} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.21} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.20} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.19} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.18} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.17} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.16} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.15} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.14} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.13} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.12} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.11} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.10} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.9} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.8} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.7} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.6} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.5} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.4} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.3} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.2} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.1} has been referenced but does not exist
, replaced by a fixed one

{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc}/usr/bin/python3 scripts/py_comp.py downunder/py_src/__init__.py debian/tmp3/posix/downunder/__init__.pyc
</usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb></usr/share/texlive/texmf-
dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/f
onts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-dist/fonts/ty
pe1/public/amsfonts/cm/cmmi6.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmmi8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr5.
pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr6.pfb></us
r/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/share/
texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-
dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share/texlive/texmf-dist/fo
nts/type1/public/amsfonts/cm/cmsy7.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmsy8.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/symbols/msam10.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/c
ourier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrr8a
.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb></usr/s
hare/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb [20></usr/share/texlive
/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb></usr/share/texlive/texmf-dist
/fonts/type1/urw/times/utmb8a.pfb]></usr/share/texlive/texmf-dist/fonts/type1/ur
w/times/utmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a
.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfbInstall file: "debian/tmp3/posix/downunder/__init__.pyc" as "debian/stage3/esys/downunder/__init__.pyc"
>/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/MTModels.py debian/tmp3/posix/downunder/apps/MTModels.pyc

Output written on cookbook.pdf (88 pages, 4380155 bytes).
Transcript written on cookbook.log.
cd debian/tmp3/posix/doc/cookbook && bibtex elist
 [21]This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: elist.aux
I found no \citation commands---while reading file elist.aux
I found no \bibdata command---while reading file elist.aux
I found no \bibstyle command---while reading file elist.aux
(There were 3 error messages)
bibtex returned an error, check the blg file
cd debian/tmp3/posix/doc/cookbook && bibtex cookbook
Install file: "debian/tmp3/posix/downunder/apps/MTModels.pyc" as "debian/stage3/esys/downunder/apps/MTModels.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/__init__.py debian/tmp3/posix/downunder/apps/__init__.pyc
This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: cookbook.aux
The style file: plainnat.bst
Database file #1: cookbook.bib
cd debian/tmp3/posix/doc/cookbook && bibtex cookbook
 [22]Install file: "debian/tmp3/posix/downunder/apps/__init__.pyc" as "debian/stage3/esys/downunder/apps/__init__.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/dcModels.py debian/tmp3/posix/downunder/apps/dcModels.pyc
This is BibTeX, Version 0.99d (TeX Live 2019/Debian)
The top-level auxiliary file: cookbook.aux
The style file: plainnat.bst
Database file #1: cookbook.bib
)cd debian/tmp3/posix/doc/cookbook && makeindex cookbook.idx

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wav
e.tex [23This is makeindex, version 2.15 [TeX Live 2019] (kpathsea + Thai support).
Scanning input file cookbook.idx....done (2 entries accepted, 0 rejected).
Sorting entries....done (2 comparisons).
Generating output file cookbook.ind....done (9 lines written, 0 warnings).
Output written in cookbook.ind.
Transcript written in cookbook.ilg.
 </<<PKGBUILDDIR>>/debian/tmp3/posix/do
c/user/figures/DiffusionRes1.pdf> </<<BUILDDIR>>/python-escript-
5.5/debian/tmp3/posix/doc/user/figures/DiffusionRes16.pdf> </build/python-escri
pt-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/DiffusionRes32.
pdf> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/use
r/figures/DiffusionRes48.pdf>] [24 </<<BUILDDIR>>/python-escript
-5.5/debian/tmp3/posix/doc/user/figures/waveu.pdf, page is rotated 90 degrees>]
cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex
Install file: "debian/tmp3/posix/downunder/apps/dcModels.pyc" as "debian/stage3/esys/downunder/apps/dcModels.pyc"
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/gravityModels.py debian/tmp3/posix/downunder/apps/gravityModels.pyc
 [25 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/use
r/figures/wavea.pdf, page is rotated 90 degrees>]entering extended mode
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/esysdoc.cls
Document Class: esysdoc 
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))Install file: "debian/tmp3/posix/downunder/apps/gravityModels.pyc" as "debian/stage3/esys/downunder/apps/gravityModels.pyc"


Package geometry Warning: Over-specification in `h'-direction.
    `width' (478.00812pt) is ignored.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/magneticModels.py debian/tmp3/posix/downunder/apps/magneticModels.pyc

(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty [26
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty])
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))Install file: "debian/tmp3/posix/downunder/apps/magneticModels.pyc" as "debian/stage3/esys/downunder/apps/magneticModels.pyc"
)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/seismicModels.py debian/tmp3/posix/downunder/apps/seismicModels.pyc

For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty [27])
(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.styInstall file: "debian/tmp3/posix/downunder/apps/seismicModels.pyc" as "debian/stage3/esys/downunder/apps/seismicModels.pyc"

(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/coordinates.py debian/tmp3/posix/downunder/coordinates.pyc
)
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty

LaTeX Warning: Citation `GNUPLOT' on page 28 undefined on input line 346.

(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd))
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)

LaTeX Warning: Citation `GNUPLOT' on page 28 undefined on input line 359.

[28
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/Wave11.pdf> </<<PKGBUILDDIR>>/debian/tm
p3/posix/doc/user/figures/Wave22.pdf> </<<BUILDDIR>>/python-escr
ipt-5.5/debian/tmp3/posix/doc/user/figures/Wave28.pdf> </build/python-escript-r
g4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Wave32.pdf> </build
/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Wa
ve36.pdf>])
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)

LaTeX Warning: Citation `SCIPY' on page 29 undefined on input line 396.


LaTeX Warning: Citation `SCIPY' on page 29 undefined on input line 398.

)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/hea
tedblock.tex [29 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/user/figures/WavePC.pdf, page is rotated 90 degrees>]Install file: "debian/tmp3/posix/downunder/coordinates.pyc" as "debian/stage3/esys/downunder/coordinates.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/costfunctions.py debian/tmp3/posix/downunder/costfunctions.pyc

(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty [30)])
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.styInstall file: "debian/tmp3/posix/downunder/costfunctions.pyc" as "debian/stage3/esys/downunder/costfunctions.pyc"
)))/usr/bin/python3 scripts/py_comp.py downunder/py_src/datasources.py debian/tmp3/posix/downunder/datasources.pyc

(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty [31]))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sto
kesflow.tex
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook_defs.tex [32
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty </<<PKGBUILDDIR>>/debian/tmp3/po
six/doc/user/figures/HeatedBlock.pdf>]
****************************************
* Local config file subfigure.cfg used *
****************************************
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)
(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty)
(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)Install file: "debian/tmp3/posix/downunder/datasources.pyc" as "debian/stage3/esys/downunder/datasources.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/dcresistivityforwardmodeling.py debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc

(/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def

LaTeX Warning: Citation `LBB' on page 33 undefined on input line 106.

[33]))
(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty)
(/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty)
(/usr/share/texlive/texmf-dist/tex/latex/cite/chapterbib.sty)
\gdef\@extra@binfo{@-1}\@writefile{toc}{\gdef \the@ipfilectr{@-1}}\@writefile{l
of}{\gdef \the@ipfilectr{@-1}}\@writefile{lot}{\gdef \the@ipfilectr{@-1}}
\@input{elist.aux}

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/elist.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty
Package `listing', V1.2, <1999/05/25>
))
\gdef\@extra@binfo{}\@writefile{toc}{\gdef \the@ipfilectr{}}\@writefile{lof}{\g
def \the@ipfilectr{}}\@writefile{lot}{\gdef \the@ipfilectr{}}
) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty)Install file: "debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc" as "debian/stage3/esys/downunder/dcresistivityforwardmodeling.pyc"

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/verinfo.tex)
Writing index file cookbook.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def/usr/bin/python3 scripts/py_comp.py downunder/py_src/domainbuilder.py debian/tmp3/posix/downunder/domainbuilder.pyc
))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sli
p.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook.aux

LaTeX Warning: Label `NEUMAN 2b' multiply defined.


LaTeX Warning: Label `fig:ex08pw' multiply defined.


LaTeX Warning: Label `fig:gmsh3dmsh' multiply defined.


LaTeX Warning: Label `sub@fig:gmsh3dmsh' multiply defined.


LaTeX Warning: Label `fig:ex9b 201' multiply defined.


LaTeX Warning: Label `sub@fig:ex9b 201' multiply defined.


LaTeX Warning: Label `fig:ex9b 201' multiply defined.


LaTeX Warning: Label `sub@fig:ex9b 201' multiply defined.

) [34 (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)] [35 </<<PKGBUILDDIR>>/debian/tmp3/pos
ix/doc/user/figures/stokes-fluid-t01.pdf> </<<BUILDDIR>>/python-
escript-5.5/debian/tmp3/posix/doc/user/figures/stokes-fluid-t10.pdf> </build/py
thon-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/stoke
s-fluid-t20.pdf> </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/user/figures/stokes-fluid-t30.pdf> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/user/figures/stokes-fluid-t40.pdf> </build/
python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/sto
kes-fluid-t50.pdf>]
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkiiInstall file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc"

[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/__init__.py debian/tmp3/posix/downunder/forwardmodels/__init__.pyc

(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty [36
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty </<<PKGBUILDDIR>>/debian
/tmp3/posix/doc/user/figures/Slip1.pdf>])
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.mapInstall file: "debian/tmp3/posix/downunder/forwardmodels/__init__.pyc" as "debian/stage3/esys/downunder/forwardmodels/__init__.pyc"
}/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/acoustic.py debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc
]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/docguide.tex [2]) [3] [4]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/currentdev.tex [5]) [6]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook.toc [37]) [7
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dir
ac.tex]Install file: "debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc" as "debian/stage3/esys/downunder/forwardmodels/acoustic.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/base.py debian/tmp3/posix/downunder/forwardmodels/base.pyc
) [8]
Chapter 1.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/intro.tex [9 [38 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/user/figures/Slip2.png]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/quickstart.tex)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/escpybas.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)Install file: "debian/tmp3/posix/downunder/forwardmodels/base.pyc" as "debian/stage3/esys/downunder/forwardmodels/base.pyc"
))
[10/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/dcresistivity.py debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc
]
Chapter 2.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example01.tex
Underfull \vbox (badness 2698) has occurred while \output is active [11pdfTeX w
arning (ext4): destination with the same identifier (name{figure.2.1}) has been
 already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.47 \end{equation}
                    </<<PKGBUILDDIR>>/debian/tmp
3/posix/doc/cookbook/figures/onedheatdiff001.pdf>] [12]Install file: "debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc" as "debian/stage3/esys/downunder/forwardmodels/dcresistivity.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/gravity.py debian/tmp3/posix/downunder/forwardmodels/gravity.pyc

Underfull \hbox (badness 4353) in paragraph at lines 185--185
[][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able 
at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound
ary _
[13] [14pdfTeX warning (ext4): destination with the same identifier (name{figur
e.2.2}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.313 T
       here are various ways to construct domain objects. The simplest form ...
 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookboo
k/figures/workflow.pngInstall file: "debian/tmp3/posix/downunder/forwardmodels/gravity.pyc" as "debian/stage3/esys/downunder/forwardmodels/gravity.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetic.py debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc
>] [15pdfTeX warning (ext4): destination with the same id
entifier (name{figure.2.3}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.313 T
       here are various ways to construct domain objects. The simplest form ...
 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookboo
k/figures/functionspace.pdf>] [16]
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.styInstall file: "debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetic.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetotelluric2d.py debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc
)ing code for file Mesh_readGmsh.cpp...
Parsing code for file Mesh_readGmsh.cpp...
Parsing code for file Mesh_rec4.cpp...
Parsing code for file Mesh_rec8.cpp...
Parsing code for file Mesh_resolveNodeIds.cpp...
Parsing code for file Mesh_tet4.cpp...
Parsing code for file Mesh_tri3.cpp...
Parsing code for file Mesh_write.cpp...
Parsing code for file Mesh_write.cpp...
Parsing code for file MINRES.cpp...
Parsing code for file MKL.cpp...
Generating code for file MKL.h...
Parsing code for file mmio.cpp...
Generating code for file mmio.h...
Parsing code for file MPIDataReducer.cpp...
Generating code for file MPIDataReducer.h...
Parsing code for file MPIScalarReducer.cpp...
Generating code for file MPIScalarReducer.h...
Parsing code for file MultiBrick.cpp...
Generating code for file MultiBrick.h...
Parsing code for file MultiRectangle.cpp...
Generating code for file MultiRectangle.h...
Parsing code for file NCHelper.cpp...
Generating code for file NCHelper.h...
Parsing code for file NewtonGMRES.cpp...
Generating code for file NodeData.h...
Parsing code for file NodeFile.cpp...
Parsing code for file NodeFile.cpp...
Generating code for file NodeFile.h...
Generating code for file NodeFile.h...
Parsing code for file NodeFile_createDenseLabelings.cpp...
Parsing code for file NodeFile_createMappings.cpp...
Parsing code for file NodeFile_createTrilinosGraph.cpp...
Parsing code for file NodeFile_gather.cpp...
Generating code for file NodeMapping.h...
Generating code for file NodeMapping.h...
Parsing code for file NonReducedVariable.cpp...
Generating code for file NonReducedVariable.h...
Parsing code for file NullDomain.cpp...
Generating code for file NullDomain.h...
Parsing code for file Options.cpp...
Generating code for file Options.h...
Generating code for file Paso.h...
Generating code for file PasoException.h...
Parsing code for file PasoUtil.cpp...
Generating code for file PasoUtil.h...
Parsing code for file Pattern.cpp...
Generating code for file Pattern.h...
Parsing code for file Pattern_mis.cpp...
Parsing code for file Pattern_reduceBandwidth.cpp...
Parsing code for file PCG.cpp...
Parsing code for file performance.cpp...
Generating code for file performance.h...
Generating code for file Pointers.h...
Parsing code for file Preconditioner.cpp...
Generating code for file Preconditioner.h...
Parsing code for file pyerr.cpp...
Generating code for file pyerr.h...
Parsing code for file Quadrature.cpp...
Generating code for file Quadrature.h...
Parsing code for file Random.cpp...
Generating code for file Random.h...
Parsing code for file ReactiveSolver.cpp...
Generating code for file ReactiveSolver.h...
Parsing code for file Rectangle.cpp...
Parsing code for file Rectangle.cpp...
Generating code for file Rectangle.h...
Generating code for file Rectangle.h...
Parsing code for file RectangleGradients.cpp...
Parsing code for file RectangleIntegrals.cpp...
Parsing code for file RectangleReductions.cpp...
Parsing code for file ReferenceElements.cpp...
Generating code for file ReferenceElements.h...
Generating code for file ReferenceElementSets.h...
Parsing code for file RILU.cpp...
Generating code for file Ripley.h...
Parsing code for file ripleycpp.cpp...
Parsing code for file RipleyDomain.cpp...
Parsing code for file RipleyDomain.cpp...
Generating code for file RipleyDomain.h...
Generating code for file RipleyDomain.h...
Parsing code for file RipleyElements.cpp...
Generating code for file RipleyElements.h...
Generating code for file RipleyException.h...
Parsing code for file RipleyNodes.cpp...
Generating code for file RipleyNodes.h...
Generating code for file RipleySystemMatrix.h...
Parsing code for file SchurComplement.cpp...
Parsing code for file ScriptMPI.cpp...
Parsing code for file ScriptMPIredirect.cpp...
Parsing code for file ShapeFunctions.cpp...
Generating code for file ShapeFunctions.h...
Parsing code for file ShapeTable.cpp...
Generating code for file ShapeTable.h...
Generating code for file SharedComponents.h...
Parsing code for file Smoother.cpp...
Parsing code for file solve.cpp...
Parsing code for file Solver.cpp...
GeneraInstall file: "debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetotelluric2d.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/pressure.py debian/tmp3/posix/downunder/forwardmodels/pressure.pyc

Underfull \hbox (badness 10000) in paragraph at lines 415--425

[17]Install file: "debian/tmp3/posix/downunder/forwardmodels/pressure.pyc" as "debian/stage3/esys/downunder/forwardmodels/pressure.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/subsidence.py debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc
Install file: "debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc" as "debian/stage3/esys/downunder/forwardmodels/subsidence.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/inversioncostfunctions.py debian/tmp3/posix/downunder/inversioncostfunctions.pyc
 [18]Install file: "debian/tmp3/posix/downunder/inversioncostfunctions.pyc" as "debian/stage3/esys/downunder/inversioncostfunctions.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/inversions.py debian/tmp3/posix/downunder/inversions.pyc

Underfull \hbox (badness 10000) in paragraph at lines 604--605


Underfull \hbox (badness 10000) in paragraph at lines 604--605

[19] [20pdfTeX warning (ext4): destination with the same identifier (name{figur
e.2.4}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.680 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ttblockspyplot150.pngInstall file: "debian/tmp3/posix/downunder/inversions.pyc" as "debian/stage3/esys/downunder/inversions.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/magtel1d.py debian/tmp3/posix/downunder/magtel1d.pyc
>])) [39 </<<BUILDDIR>>/python-escript-
5.5/debian/tmp3/posix/doc/user/figures/diracplot.png>]Install file: "debian/tmp3/posix/downunder/magtel1d.pyc" as "debian/stage3/esys/downunder/magtel1d.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/magtel2d.py debian/tmp3/posix/downunder/magtel2d.pyc

Underfull \hbox (badness 10000) in paragraph at lines 684--692


LaTeX Warning: Float too large for page by 10.55325pt on input line 775.

[21] [22pdfTeX warning (ext4): destination with the same identifier (name{figur
e.2.5}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.776 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/blockspyplot001.pngInstall file: "debian/tmp3/posix/downunder/magtel2d.pyc" as "debian/stage3/esys/downunder/magtel2d.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/mappings.py debian/tmp3/posix/downunder/mappings.pyc
Install file: "debian/tmp3/posix/downunder/mappings.pyc" as "debian/stage3/esys/downunder/mappings.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/minimizers.py debian/tmp3/posix/downunder/minimizers.pyc
> </<<BUILDDIR>>/py
thon-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/blockspyplot050.pngInstall file: "debian/tmp3/posix/downunder/minimizers.pyc" as "debian/stage3/esys/downunder/minimizers.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/regularizations.py debian/tmp3/posix/downunder/regularizations.pyc
> </
<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook/f
igures/blockspyplot200.pngInstall file: "debian/tmp3/posix/downunder/regularizations.pyc" as "debian/stage3/esys/downunder/regularizations.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/seismic.py debian/tmp3/posix/downunder/seismic.pyc
>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/exe
cute.tex [40]>]
Chapter 2.

LaTeX Warning: Citation `OPENMP' on page 41 undefined on input line 46.


LaTeX Warning: Citation `MPI' on page 41 undefined on input line 47.

[41]Install file: "debian/tmp3/posix/downunder/seismic.pyc" as "debian/stage3/esys/downunder/seismic.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitinversioncostfunctions.py debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc
 [42]) [43] [44]
Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][]
[][][][][][][][][][][][][][][][][][][][][][][][][] 
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example02.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esc
ript.texInstall file: "debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc" as "debian/stage3/esys/downunder/splitinversioncostfunctions.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitminimizers.py debian/tmp3/posix/downunder/splitminimizers.pyc

Underfull \hbox (badness 10000) in paragraph at lines 17--19

[23]
Chapter 3.
[45]
Underfull \hbox (badness 1648) in paragraph at lines 79--79
[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac
es in []. An ar-row in-di-cates that a func-tion in the

LaTeX Warning: Citation `LBB' on page 46 undefined on input line 83.

[46 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/EscriptDiagram1.pdf>]Install file: "debian/tmp3/posix/downunder/splitminimizers.pyc" as "debian/stage3/esys/downunder/splitminimizers.pyc"
/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitregularizations.py debian/tmp3/posix/downunder/splitregularizations.pyc


LaTeX Warning: Citation `NUMPY' on page 47 undefined on input line 150.

[47] [24pdfTeX warning (ext4): destination with the same identifier (name{figur
e.2.6}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.109 \end{python}
                   </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/cookbook/figures/onedheatdiff002.pdf>]ting code for file Solver.h...
Parsing code for file Solver_Function.cpp...
Parsing code for file SolverOptions.cpp...
Generating code for file SolverOptions.h...
Parsing code for file SparseMatrix.cpp...
Generating code for file SparseMatrix.h...
Parsing code for file SparseMatrix_getSubmatrix.cpp...
Parsing code for file SparseMatrix_MatrixMatrix.cpp...
Parsing code for file SparseMatrix_MatrixMatrixTranspose.cpp...
Parsing code for file SparseMatrix_MatrixVector.cpp...
Parsing code for file SparseMatrix_nullifyRowsAndCols.cpp...
Parsing code for file SparseMatrix_saveHB.cpp...
Generating code for file Speckley.h...
Parsing code for file speckleycpp.cpp...
Parsing code for file SpeckleyDomain.cpp...
Parsing code for file SpeckleyDomain.cpp...
Generating code for file SpeckleyDomain.h...
Generating code for file SpeckleyDomain.h...
Parsing code for file SpeckleyElements.cpp...
Generating code for file SpeckleyElements.h...
Generating code for file SpeckleyException.h...
Parsing code for file SpeckleyNodes.cpp...
Generating code for file SpeckleyNodes.h...
Parsing code for file SplitWorld.cpp...
Generating code for file SplitWorld.h...
Generating code for file SplitWorldException.h...
Parsing code for file SubWorld.cpp...
Generating code for file SubWorld.h...
Generating code for file system_dep.h...
Generating code for file system_dep.h...
Generating code for file system_dep.h...
Parsing code for file SystemMatrix.cpp...
Generating code for file SystemMatrix.h...
Parsing code for file SystemMatrix_copyRemoteCoupleBlock.cpp...
Parsing code for file SystemMatrix_debug.cpp...
Parsing code for file SystemMatrix_extendedRows.cpp...
Parsing code for file SystemMatrix_loadMM.cpp...
Parsing code for file SystemMatrix_MatrixVector.cpp...
Parsing code for file SystemMatrix_mergeMainAndCouple.cpp...
Generating code for file SystemMatrixException.h...
Parsing code for file SystemMatrixPattern.cpp...
Generating code for file SystemMatrixPattern.h...
Parsing code for file SystemMatrixPattern_unrollBlocks.cpp...
Parsing code for file Taipan.cpp...
Generating code for file Taipan.h...
Parsing code for file TestDomain.cpp...
Generating code for file TestDomain.h...
Parsing code for file TFQMR.cpp...
Parsing code for file Transport.cpp...
Generating code for file Transport.h...
Parsing code for file Transport_solve.cpp...
Generating code for file TransportProblemException.h...
Parsing code for file UMFPACK.cpp...
Generating code for file UMFPACK.h...
Parsing code for file Util.cpp...
Parsing code for file Util.cpp...
Generating code for file Util.h...
Generating code for file Util.h...
Parsing code for file Utils.cpp...
Generating code for file Utils.h...
Parsing code for file VisItControl.cpp...
Generating code for file VisItControl.h...
Parsing code for file VisItData.cpp...
Generating code for file VisItData.h...
Generating code for file vtkCellType.h...
Parsing code for file WaveAssembler2D.cpp...
Parsing code for file WaveAssembler2D.cpp...
Generating code for file WaveAssembler2D.h...
Generating code for file WaveAssembler2D.h...
Parsing code for file WaveAssembler3D.cpp...
Parsing code for file WaveAssembler3D.cpp...
Generating code for file WaveAssembler3D.h...
Generating code for file WaveAssembler3D.h...
Generating code for file weipa.h...
Parsing code for file weipacpp.cpp...
Generating code for file WeipaException.h...
Parsing code for file WrappedArray.cpp...
Generating code for file WrappedArray.h...
Generating file documentation...
Generating docs for file AbstractAssembler.cpp...
Generating docs for file AbstractAssembler.h...
Generating docs for file AbstractAssembler.h...
Generating docs for file AbstractContinuousDomain.cpp...
Generating docs for file AbstractContinuousDomain.h...
Generating docs for file AbstractDomain.cpp...
Generating docs for file AbstractDomain.h...
Generating docs for file AbstractReducer.cpp...
Generating docs for file AbstractReducer.h...
Generating docs for file AbstractSystemMatrix.cpp...
Generating docs for file AbstractSystemMatrix.h...
Generating docs for file AbstractTransportProblem.cpp.

LaTeX Warning: Float too large for page by 10.55325pt on input line 146.

) [25pdfTeX warning (ext4): destination with the same identifier (name{figure.2
.7}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.108 \chapter
              {Heat Diffusion in Two Dimensions} </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ttrodpyplot150.pngInstall file: "debian/tmp3/posix/downunder/splitregularizations.pyc" as "debian/stage3/esys/downunder/splitregularizations.pyc"
/usr/bin/python3 scripts/py_comp.py dudley/py_src/__init__.py debian/tmp3/posix/dudley/py/__init__.pyc
 [48]Install file: "debian/tmp3/posix/dudley/py/__init__.pyc" as "debian/stage3/esys/dudley/__init__.pyc"


LaTeX Warning: Citation `NETCDF' on page 49 undefined on input line 318.

[49>]
[26 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/EscriptDiagram2.pdf>pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.108 \chapter
              {Heat Diffusion in Two Dimensions} </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/rodpyplot001.png]..
Generating docs for file AbstractTransportProblem.h...
Generating docs for file ArrayOps.cpp...
Generating docs for file ArrayOps.h...
Generating docs for file Assemble.h...
Generating docs for file Assemble.h...
Generating docs for file Assemble_addToSystemMatrix.cpp...
Generating docs for file Assemble_addToSystemMatrix.cpp...
Generating docs for file Assemble_AverageElementData.cpp...
Generating docs for file Assemble_AverageElementData.cpp...
Generating docs for file Assemble_CopyElementData.cpp...
Generating docs for file Assemble_CopyElementData.cpp...
Generating docs for file Assemble_CopyNodalData.cpp...
Generating docs for file Assemble_CopyNodalData.cpp...
Generating docs for file Assemble_getAssembleParameters.cpp...
Generating docs for file Assemble_getAssembleParameters.cpp...
Generating docs for file Assemble_getNormal.cpp...
Generating docs for file Assemble_getNormal.cpp...
Generating docs for file Assemble_getSize.cpp...
Generating docs for file Assemble_getSize.cpp...
Generating docs for file Assemble_gradient.cpp...
Generating docs for file Assemble_gradient.cpp...
Generating docs for file Assemble_integrate.cpp...
Generating docs for file Assemble_integrate.cpp...
Generating docs for file Assemble_interpolate.cpp...
Generating docs for file Assemble_interpolate.cpp...
Generating docs for file Assemble_jacobians.cpp...
Generating docs for file Assemble_jacobians.cpp...
Generating docs for file Assemble_LumpedSystem.cpp...
Generating docs for file Assemble_LumpedSystem.cpp...
Generating docs for file Assemble_NodeCoordinates.cpp...
Generating docs for file Assemble_NodeCoordinates.cpp...
Generating docs for file Assemble_PDE.cpp...
Generating docs for file Assemble_PDE.cpp...
Generating docs for file Assemble_PDE_Points.cpp...
Generating docs for file Assemble_PDE_Points.cpp...
Generating docs for file Assemble_PDE_Single_1D.cpp...
Generating docs for file Assemble_PDE_Single_2D.cpp...
Generating docs for file Assemble_PDE_Single_2D.cpp...
Generating docs for file Assemble_PDE_Single_3D.cpp...
Generating docs for file Assemble_PDE_Single_3D.cpp...
Generating docs for file Assemble_PDE_Single_C.cpp...
Generating docs for file Assemble_PDE_System_1D.cpp...
Generating docs for file Assemble_PDE_System_2D.cpp...
Generating docs for file Assemble_PDE_System_2D.cpp...
Generating docs for file Assemble_PDE_System_3D.cpp...
Generating docs for file Assemble_PDE_System_3D.cpp...
Generating docs for file Assemble_PDE_System_C.cpp...
Generating docs for file Assert.h...
Generating docs for file BiCGStab.cpp...
Generating docs for file BinaryDataReadyOps.cpp...
Generating docs for file BinaryDataReadyOps.h...
Generating docs for file BlockOps.h...
Generating docs for file blocktools.cpp...
Generating docs for file blocktools.h...
Generating docs for file blocktools2.cpp...
Generating docs for file Brick.cpp...
Generating docs for file Brick.cpp...
Generating docs for file Brick.h...
Generating docs for file Brick.h...
Generating docs for file BrickGradients.cpp...
Generating docs for file BrickIntegrals.cpp...
Generating docs for file BrickReductions.cpp...
Generating docs for file Coupler.cpp...
Generating docs for file Coupler.h...
Generating docs for file CrossDomainCoupler.cpp...
Generating docs for file CrossDomainCoupler.h...
Generating docs for file Data.cpp...
Generating docs for file Data.h...
Generating docs for file DataAbstract.cpp...
Generating docs for file DataAbstract.h...
Generating docs for file DataConstant.cpp...
Generating docs for file DataConstant.h...
Generating docs for file DataEmpty.cpp...
Generating docs for file DataEmpty.h...
Generating docs for file DataException.h...
Generating docs for file DataExpanded.cpp...
Generating docs for file DataExpanded.h...
Generating docs for file DataFactory.cpp...
Generating docs for file DataFactory.h...
Generating docs for file DataLazy.cpp...
Generating docs for file DataLazy.h...
Generating docs for file DataReady.cpp...
Generating docs for file DataReady.h...
Generating docs for file DataTagged.cpp...
Generating docs for file DataTagged.h...
G [50] [51] [52]> </b
uild/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/fi
gures/rodpyplot050.png [53]enerating docs for file DataTypes.cpp...
Generating docs for file DataTypes.h...
Generating docs for file DataVar.cpp...
Generating docs for file DataVar.h...
Generating docs for file DataVector.cpp...
Generating docs for file DataVector.h...
Generating docs for file DataVectorAlt.cpp...
Generating docs for file DataVectorAlt.h...
Generating docs for file DataVectorOps.cpp...
Generating docs for file DataVectorOps.h...
Generating docs for file DataVectorTaipan.cpp...
Generating docs for file DataVectorTaipan.h...
Generating docs for file DefaultAssembler2D.cpp...
Generating docs for file DefaultAssembler2D.cpp...
Generating docs for file DefaultAssembler2D.h...
Generating docs for file DefaultAssembler2D.h...
Generating docs for file DefaultAssembler3D.cpp...
Generating docs for file DefaultAssembler3D.cpp...
Generating docs for file DefaultAssembler3D.h...
Generating docs for file DefaultAssembler3D.h...
Generating docs for file Distribution.h...
Generating docs for file Dodgy.cpp...
Generating docs for file Dodgy.h...
Generating docs for file DomainChunk.h...
Generating docs for file DomainException.h...
Generating docs for file DomainFactory.cpp...
Generating docs for file DomainFactory.cpp...
Generating docs for file DomainFactory.h...
Generating docs for file DomainFactory.h...
Generating docs for file domainhelpers.cpp...
Generating docs for file domainhelpers.cpp...
Generating docs for file domainhelpers.h...
Generating docs for file domainhelpers.h...
Generating docs for file Dudley.h...
Generating docs for file dudleycpp.cpp...
Generating docs for file DudleyDomain.cpp...
Generating docs for file DudleyDomain.h...
Generating docs for file DudleyException.h...
Generating docs for file DudleyVersion.h...
Generating docs for file ElementData.h...
Generating docs for file ElementFile.cpp...
Generating docs for file ElementFile.cpp...
Generating docs for file ElementFile.h...
Generating docs for file ElementFile.h...
Generating docs for file ElementFile_createColoring.cpp...
Generating docs for file ElementFile_distributeByRankOfDOF.cpp...
Generating docs for file ElementFile_jacobians.cpp...
Generating docs for file ElementFile_jacobians.cpp...
Generating docs for file ElementType.h...
Generating docs for file ES_optype.cpp...
Generating docs for file ES_optype.h...
Generating docs for file escriptcpp.cpp...
Generating docs for file EscriptDataset.cpp...
Generating docs for file EscriptDataset.h...
Generating docs for file EscriptParams.cpp...
Generating docs for file EscriptParams.h...
Generating docs for file EsysException.h...
Generating docs for file EsysMPI.cpp...
Generating docs for file EsysMPI.h...
Generating docs for file ExceptionTranslators.cpp...
Generating docs for file ExceptionTranslators.h...
Generating docs for file FCT_Solver.cpp...
Generating docs for file FCT_Solver.h...
Generating docs for file FileWriter.h...
Generating docs for file Finley.h...
Generating docs for file finleycpp.cpp...
Generating docs for file FinleyDomain.cpp...
Generating docs for file FinleyDomain.cpp...
Generating docs for file FinleyDomain.h...
Generating docs for file FinleyDomain.h...
Generating docs for file FinleyElements.cpp...
Generating docs for file FinleyElements.h...
Generating docs for file FinleyException.h...
Generating docs for file FinleyNodes.cpp...
Generating docs for file FinleyNodes.h...
Generating docs for file FinleyVersion.h...
Generating docs for file FluxLimiter.cpp...
Generating docs for file FluxLimiter.h...
Generating docs for file Functions.cpp...
Generating docs for file Functions.h...
Generating docs for file FunctionSpace.cpp...
Generating docs for file FunctionSpace.h...
Generating docs for file FunctionSpaceException.h...
Generating docs for file FunctionSpaceFactory.cpp...
Generating docs for file FunctionSpaceFactory.h...
Generating docs for file GMRES.cpp...
Generating docs for file GMRES2.cpp...
Generating docs for file ILU.cpp...
Generating docs for file index.h...
Generating docs for file IndexList.cpp...
Generating docs for file IndexList.cpp...
Generating docs for file IndexList.h.> </<<PKGBUILDDIR>>/debian
/tmp3/posix/doc/cookbook/figures/rodpyplot200.png [54]Install file: "dudley/src/DomainFactory.h" as "debian/stage3/include/dudley/DomainFactory.h"
Install file: "dudley/src/Dudley.h" as "debian/stage3/include/dudley/Dudley.h"
Install file: "dudley/src/DudleyDomain.h" as "debian/stage3/include/dudley/DudleyDomain.h"
Install file: "escriptcore/src/ExceptionTranslators.h" as "debian/stage3/include/escript/ExceptionTranslators.h"

Underfull \vbox (badness 1348) has occurred while \output is active [55]Install file: "dudley/src/DudleyException.h" as "debian/stage3/include/dudley/DudleyException.h"
>]Install file: "escriptcore/src/Data.h" as "debian/stage3/include/escript/Data.h"

Chapter 3.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example03.texInstall file: "escriptcore/src/DataTypes.h" as "debian/stage3/include/escript/DataTypes.h"
Install file: "escriptcore/src/EsysMPI.h" as "debian/stage3/include/escript/EsysMPI.h"
Install file: "dudley/src/ElementFile.h" as "debian/stage3/include/dudley/ElementFile.h"
Install file: "dudley/src/NodeFile.h" as "debian/stage3/include/dudley/NodeFile.h"
..
Generating docs for file IndexList.h...
Generating docs for file IndexList.h...
Generating docs for file lagrange_functions.h...
Generating docs for file LameAssembler2D.cpp...
Generating docs for file LameAssembler2D.h...
Generating docs for file LameAssembler3D.cpp...
Generating docs for file LameAssembler3D.h...
Generating docs for file LapackInverseHelper.cpp...
Generating docs for file LapackInverseHelper.h...
Generating docs for file Mesh_addPoints.cpp...
Generating docs for file Mesh_distributeByRankOfDOF.cpp...
Generating docs for file Mesh_findMatchingFaces.cpp...
Generating docs for file Mesh_getPasoPattern.cpp...
Generating docs for file Mesh_getPattern.cpp...
Generating docs for file Mesh_getTrilinosGraph.cpp...
Generating docs for file Mesh_glueFaces.cpp...
Generating docs for file Mesh_hex20.cpp...
Generating docs for file Mesh_hex8.cpp...
Generating docs for file Mesh_joinFaces.cpp...
Generating docs for file Mesh_merge.cpp...
Generating docs for file Mesh_optimizeDOFDistribution.cpp...
Generating docs for file Mesh_optimizeDOFDistribution.cpp...
Generating docs for file Mesh_optimizeDOFLabeling.cpp...
Generating docs for file Mesh_read.cpp...
Generating docs for file Mesh_read.cpp...
Generating docs for file Mesh_readGmsh.cpp...
Generating docs for file Mesh_readGmsh.cpp...
Generating docs for file Mesh_rec4.cpp...
Generating docs for file Mesh_rec8.cpp...
Generating docs for file Mesh_resolveNodeIds.cpp...
Generating docs for file Mesh_tet4.cpp...
Generating docs for file Mesh_tri3.cpp...
Generating docs for file Mesh_write.cpp...
Generating docs for file Mesh_write.cpp...
Generating docs for file MINRES.cpp...
Generating docs for file MKL.cpp...
Generating docs for file MKL.h...
Generating docs for file mmio.cpp...
Generating docs for file mmio.h...
Generating docs for file MPIDataReducer.cpp...
Generating docs for file MPIDataReducer.h...
Generating docs for file MPIScalarReducer.cpp...
Generating docs for file MPIScalarReducer.h...
Generating docs for file MultiBrick.cpp...
Generating docs for file MultiBrick.h...
Generating docs for file MultiRectangle.cpp...
Generating docs for file MultiRectangle.h...
Generating docs for file NCHelper.cpp...
Generating docs for file NCHelper.h...
Generating docs for file NewtonGMRES.cpp...
Generating docs for file NodeData.h...
Generating docs for file NodeFile.cpp...
Generating docs for file NodeFile.cpp...
Generating docs for file NodeFile.h...
Generating docs for file NodeFile.h...
Generating docs for file NodeFile_createDenseLabelings.cpp...
Generating docs for file NodeFile_createMappings.cpp...
Generating docs for file NodeFile_createTrilinosGraph.cpp...
Generating docs for file NodeFile_gather.cpp...
Generating docs for file NodeMapping.h...
Generating docs for file NodeMapping.h...
Generating docs for file NonReducedVariable.cpp...
Generating docs for file NonReducedVariable.h...
Generating docs for file NullDomain.cpp...
Generating docs for file NullDomain.h...
Generating docs for file Options.cpp...
Generating docs for file Options.h...
Generating docs for file Paso.h...
Generating docs for file PasoException.h...
Generating docs for file PasoUtil.cpp...
Generating docs for file PasoUtil.h...
Generating docs for file Pattern.cpp...
Generating docs for file Pattern.h...
Generating docs for file Pattern_mis.cpp...
Generating docs for file Pattern_reduceBandwidth.cpp...
Generating docs for file PCG.cpp...
Generating docs for file performance.cpp...
Generating docs for file performance.h...
Generating docs for file Pointers.h...
Generating docs for file Preconditioner.cpp...
Generating docs for file Preconditioner.h...
Generating docs for file pyerr.cpp...
Generating docs for file pyerr.h...
Generating docs for file Quadrature.cpp...
Generating docs for file Quadrature.h...
Generating docs for file Random.cpp...
Generating docs for file Random.h...
Generating docs for file ReactiveSolver.cpp...
Generating docs for file ReactiveSolver.h...
Generating docs for file Rectangle.cpp...
Generating docs for file Rectangle.cpp...
Generating docs for file Rectangle.Install file: "dudley/src/Util.h" as "debian/stage3/include/dudley/Util.h"
Install file: "escriptcore/src/AbstractContinuousDomain.h" as "debian/stage3/include/escript/AbstractContinuousDomain.h"
Install file: "escriptcore/src/FunctionSpace.h" as "debian/stage3/include/escript/FunctionSpace.h"
Install file: "escriptcore/src/FunctionSpaceFactory.h" as "debian/stage3/include/escript/FunctionSpaceFactory.h"
Install file: "paso/src/SystemMatrixPattern.h" as "debian/stage3/include/paso/SystemMatrixPattern.h"
Install file: "escriptcore/src/EsysException.h" as "debian/stage3/include/escript/EsysException.h"


LaTeX Warning: Citation `gaussfilter' on page 56 undefined on input line 909.

[56]
Underfull \hbox (badness 10000) in paragraph at lines 22--23


Underfull \hbox (badness 10000) in paragraph at lines 22--23

[27 [57]] [28pdfTeX warning (ext4): destination with the same identifier (name{figur
e.3.1}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.141 \begin{python}
                     </<<PKGBUILDDIR>>/debian/tm
p3/posix/doc/cookbook/figures/twodheatdiff.pdf>] [58]h...
Generating docs for file Rectangle.h...
Generating docs for file RectangleGradients.cpp...
Generating docs for file RectangleIntegrals.cpp...
Generating docs for file RectangleReductions.cpp...
Generating docs for file ReferenceElements.cpp...
Generating docs for file ReferenceElements.h...
Generating docs for file ReferenceElementSets.h...
Generating docs for file RILU.cpp...
Generating docs for file Ripley.h...
Generating docs for file ripleycpp.cpp...
Generating docs for file RipleyDomain.cpp...
Generating docs for file RipleyDomain.cpp...
Generating docs for file RipleyDomain.h...
Generating docs for file RipleyDomain.h...
Generating docs for file RipleyElements.cpp...
Generating docs for file RipleyElements.h...
Generating docs for file RipleyException.h...
Generating docs for file RipleyNodes.cpp...
Generating docs for file RipleyNodes.h...
Generating docs for file RipleySystemMatrix.h...
Generating docs for file SchurComplement.cpp...
Generating docs for file ScriptMPI.cpp...
Generating docs for file ScriptMPIredirect.cpp...
Generating docs for file ShapeFunctions.cpp...
Generating docs for file ShapeFunctions.h...
Generating docs for file ShapeTable.cpp...
Generating docs for file ShapeTable.h...
Generating docs for file SharedComponents.h...
Generating docs for file Smoother.cpp...
Generating docs for file solve.cpp...
Generating docs for file Solver.cpp...
Generating docs for file Solver.h...
Generating docs for file Solver_Function.cpp...
Generating docs for file SolverOptions.cpp...
Generating docs for file SolverOptions.h...
Generating docs for file SparseMatrix.cpp...
Generating docs for file SparseMatrix.h...
Generating docs for file SparseMatrix_getSubmatrix.cpp...
Generating docs for file SparseMatrix_MatrixMatrix.cpp...
Generating docs for file SparseMatrix_MatrixMatrixTranspose.cpp...
Generating docs for file SparseMatrix_MatrixVector.cpp...
Generating docs for file SparseMatrix_nullifyRowsAndCols.cpp...
Generating docs for file SparseMatrix_saveHB.cpp...
Generating docs for file Speckley.h...
Generating docs for file speckleycpp.cpp...
Generating docs for file SpeckleyDomain.cpp...
Generating docs for file SpeckleyDomain.cpp...
Generating docs for file SpeckleyDomain.h...
Generating docs for file SpeckleyDomain.h...
Generating docs for file SpeckleyElements.cpp...
Generating docs for file SpeckleyElements.h...
Generating docs for file SpeckleyException.h...
Generating docs for file SpeckleyNodes.cpp...
Generating docs for file SpeckleyNodes.h...
Generating docs for file SplitWorld.cpp...
Generating docs for file SplitWorld.h...
Generating docs for file SplitWorldException.h...
Generating docs for file SubWorld.cpp...
Generating docs for file SubWorld.h...
Generating docs for file system_dep.h...
Generating docs for file system_dep.h...
Generating docs for file system_dep.h...
Generating docs for file SystemMatrix.cpp...
Generating docs for file SystemMatrix.h...
Generating docs for file SystemMatrix_copyRemoteCoupleBlock.cpp...
Generating docs for file SystemMatrix_debug.cpp...
Generating docs for file SystemMatrix_extendedRows.cpp...
Generating docs for file SystemMatrix_loadMM.cpp...
Generating docs for file SystemMatrix_MatrixVector.cpp...
Generating docs for file SystemMatrix_mergeMainAndCouple.cpp...
Generating docs for file SystemMatrixException.h...
Generating docs for file SystemMatrixPattern.cpp...
Generating docs for file SystemMatrixPattern.h...
Generating docs for file SystemMatrixPattern_unrollBlocks.cpp...
Generating docs for file Taipan.cpp...
Generating docs for file Taipan.h...
Generating docs for file TestDomain.cpp...
Generating docs for file TestDomain.h...
Generating docs for file TFQMR.cpp...
Generating docs for file Transport.cpp...
Generating docs for file Transport.h...
Generating docs for file Transport_solve.cpp...
Generating docs for file TransportProblemException.h...
Generating docs for file UMFPACK.cpp...
Generating docs for file UMFPACK.h...
Generating docs for file Util.cpp...
Generating docs for file Util.cpp...
Generating docs for file Util.h...
Generating docs  [59] [60]

LaTeX Warning: Float too large for page by 12.55325pt on input line 232.

[29] [61/<<PKGBUILDDIR>>/dudley/src/DomainFactory.cpp:688: warning: The following parameters of dudley::brick(escript::JMPI jmpi, dim_t n0=1, dim_t n1=1, dim_t n2=1, int order=1, double l0=1.0, double l1=1.0, double l2=1.0, bool periodic0=false, bool periodic1=false, bool periodic2=false, int integrationOrder=-1, int reducedIntegrationOrder=-1, bool useElementsOnFace=false, bool useFullElementOrder=false, bool optimize=false) are not documented:
  parameter 'periodic0'
  parameter 'periodic1'
  parameter 'periodic2'
  parameter 'useElementsOnFace'
  parameter 'useFullElementOrder'
] [62] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [63]
Overfull \hbox (46.961pt too wide) in paragraph at lines 286--287
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 


Underfull \hbox (badness 10000) in paragraph at lines 306--311

[30/<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h:131: warning: argument 'fileName' of command @param is not found in the argument list of dudley::DudleyDomain::read(escript::JMPI mpiInfo, const std::string &filename, bool optimize)
/<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h:139: warning: The following parameters of dudley::DudleyDomain::read(escript::JMPI mpiInfo, const std::string &filename, bool optimize) are not documented:
  parameter 'filename'
]) [31] [32pdfTeX warning (ext4): destination with the same identifier (name
{figure.3.2}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.112 \chapter
              {Complex Geometries} </<<BUILDDIR>>/python-escript
-5.5/debian/tmp3/posix/doc/cookbook/figures/heatrefraction001.png [64]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) [65]> </build/pyth
on-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/hea
trefraction030.png/<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.h:1377: warning: argument 'shape' of command @param is not found in the argument list of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value)
/<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.h:1396: warning: The following parameters of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value) are not documented:
  parameter 'leftShape'

Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 
[66]
Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743
\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st
ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 
and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . 
[67]> </<<PKGBUILDDIR>>/debian/tmp
3/posix/doc/cookbook/figures/heatrefraction200.png [68] [69] [70] [71]>] [33pdfTeX warning (ext4): 
destination with the same identifier (name{figure.3.3}) has been already used, 
duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.112 \chapter
              {Complex Geometries}pdfTeX warning (ext4): destination with the s
ame identifier (name{figure.3.4}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.112 \chapter
              {Complex Geometries} </<<BUILDDIR>>/python-escript
-5.5/debian/tmp3/posix/doc/cookbook/figures/ScreeshotMayavi2n1.png/<<PKGBUILDDIR>>/escriptcore/src/Data.h:1599: warning: The following parameters of escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy) are not documented:
  parameter 'dummy'
/<<PKGBUILDDIR>>/escriptcore/src/Data.h:653: warning: The following parameters of escript::Data::getSampleDataByTag(int tag, DataTypes::real_t dummy=0) are not documented:
  parameter 'dummy'
/<<PKGBUILDDIR>>/escriptcore/src/Data.h:610: warning: The following parameters of escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const are not documented:
  parameter 'dummy'
/<<PKGBUILDDIR>>/escriptcore/src/Data.h:624: warning: The following parameters of escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) are not documented:
  parameter 'dummy'
 [72]> </build/pyt
hon-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/Sc
reeshotMayavi2n2.png/<<PKGBUILDDIR>>/escriptcore/src/DataAbstract.h:108: warning: The following parameters of escript::DataAbstract::DataAbstract(const FunctionSpace &what, const ShapeType &shape, bool isDataEmpty=false, bool isCplx=false) are not documented:
  parameter 'isCplx'
 [73]

LaTeX Warning: Citation `lazyauspdc' on page 74 undefined on input line 2248.

) [74]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lin
earPDE.tex>] [34]
Chapter 4.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example04.tex
Chapter 4.
[75] [76]
Underfull \hbox (badness 10000) in paragraph at lines 37--41

[35]Install file: "escriptcore/src/DataAbstract.h" as "debian/stage3/include/escript/DataAbstract.h"
Install file: "escriptcore/src/DataConstant.h" as "debian/stage3/include/escript/DataConstant.h"
Install file: "escriptcore/src/DataException.h" as "debian/stage3/include/escript/DataException.h"
Install file: "escriptcore/src/DataExpanded.h" as "debian/stage3/include/escript/DataExpanded.h"
Install file: "escriptcore/src/DataLazy.h" as "debian/stage3/include/escript/DataLazy.h"
Install file: "escriptcore/src/DataReady.h" as "debian/stage3/include/escript/DataReady.h"
Install file: "escriptcore/src/DataTagged.h" as "debian/stage3/include/escript/DataTagged.h"
Install file: "escriptcore/src/DataVectorOps.h" as "debian/stage3/include/escript/DataVectorOps.h"
Install file: "escriptcore/src/system_dep.h" as "debian/stage3/include/escript/system_dep.h"
Install file: "escriptcore/src/Assert.h" as "debian/stage3/include/escript/Assert.h"
Install file: "dudley/src/ElementType.h" as "debian/stage3/include/dudley/ElementType.h"
Install file: "dudley/src/NodeMapping.h" as "debian/stage3/include/dudley/NodeMapping.h"
Install file: "escriptcore/src/Distribution.h" as "debian/stage3/include/escript/Distribution.h"
Install file: "paso/src/Coupler.h" as "debian/stage3/include/paso/Coupler.h"

Overfull \hbox (18.97215pt too wide) in paragraph at lines 180--182
\OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in-
di-cates that it is un-de-fined. For more de-tails on \OT1/pcr/m/n/10 SolverOpt
ions
[77Install file: "escriptcore/src/AbstractDomain.h" as "debian/stage3/include/escript/AbstractDomain.h"
]Install file: "escriptcore/src/AbstractSystemMatrix.h" as "debian/stage3/include/escript/AbstractSystemMatrix.h"
Install file: "escriptcore/src/AbstractTransportProblem.h" as "debian/stage3/include/escript/AbstractTransportProblem.h"
Install file: "paso/src/Pattern.h" as "debian/stage3/include/paso/Pattern.h"
 [36pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.1}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.139 \begin{python}
                     </<<PKGBUILDDIR>>/debian/tm
p3/posix/doc/cookbook/figures/pycadrec.pdf [78]>] [79] [80]/<<PKGBUILDDIR>>/escriptcore/src/DataTagged.h:431: warning: The following parameters of escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) are not documented:
  parameter 'dummy'
/<<PKGBUILDDIR>>/escriptcore/src/DataTagged.h:526: warning: The following parameters of escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) are not documented:
  parameter 'dummy'
 [37] [38pdfTeX warning (ext4): des
tination with the same identifier (name{figure.4.2}) has been already used, dup
licate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.194 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/simplemesh.png [81]

LaTeX Warning: Reference `TAB FINLEY SOLVER OPTIONS 2' on page 82 undefined on 
input line 566.

[82] [83] [84]

LaTeX Warning: Citation `MKL' on page 85 undefined on input line 914.


LaTeX Warning: Citation `UMFPACK' on page 85 undefined on input line 919.

[85]/<<PKGBUILDDIR>>/escriptcore/src/EsysMPI.h:93: warning: explicit link request to 'CPUs' could not be resolved


LaTeX Warning: Citation `Saad' on page 86 undefined on input line 938.


LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 943.


LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 948.


LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 952.


LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 973.


LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 977.


LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 981.


LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 985.


LaTeX Warning: Citation `Saad' on page 86 undefined on input line 991.


LaTeX Warning: Citation `Saad' on page 86 undefined on input line 995.


LaTeX Warning: Citation `AMG' on page 86 undefined on input line 999.


LaTeX Warning: Citation `Saad' on page 86 undefined on input line 1004.


LaTeX Warning: Citation `RILU' on page 86 undefined on input line 1015.

[86]

LaTeX Warning: Citation `Trilinos' on page 87 undefined on input line 1043.


LaTeX Warning: Citation `AMG' on page 87 undefined on input line 1051.


LaTeX Warning: Citation `AMG' on page 87 undefined on input line 1054.


LaTeX Warning: Citation `AMG' on page 87 undefined on input line 1057.


(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lum
ping.tex [87] [88 </<<PKGBUILDDIR>>/debian/tmp3/
posix/doc/user/figures/lumping_valet_a_1.png/<<PKGBUILDDIR>>/escriptcore/src/SolverOptions.h:541: warning: argument 'Hermitian' of command @param is not found in the argument list of escript::SolverBuddy::setHermitian(bool hermitian)
/<<PKGBUILDDIR>>/escriptcore/src/SolverOptions.h:546: warning: The following parameters of escript::SolverBuddy::setHermitian(bool hermitian) are not documented:
  parameter 'hermitian'
for file Util.h...
Generating docs for file Utils.cpp...
Generating docs for file Utils.h...
Generating docs for file VisItControl.cpp...
Generating docs for file VisItControl.h...
Generating docs for file VisItData.cpp...
Generating docs for file VisItData.h...
Generating docs for file vtkCellType.h...
Generating docs for file WaveAssembler2D.cpp...
Generating docs for file WaveAssembler2D.cpp...
Generating docs for file WaveAssembler2D.h...
Generating docs for file WaveAssembler2D.h...
Generating docs for file WaveAssembler3D.cpp...
Generating docs for file WaveAssembler3D.cpp...
Generating docs for file WaveAssembler3D.h...
Generating docs for file WaveAssembler3D.h...
Generating docs for file weipa.h...
Generating docs for file weipacpp.cpp...
Generating docs for file WeipaException.h...
Generating docs for file WrappedArray.cpp...
Generating docs for file WrappedArray.h...
Generating page documentation...
Generating group documentation...
Generating class documentation...
Generating docs for compound Block...
Generating docs for compound Block2...
Generating docs for compound BlockGrid...
Generating docs for compound BlockGrid2...
Generating docs for compound message...
Generating namespace index...
Generating docs for namespace dudley
Generating docs for compound dudley::AssembleParameters...
Generating docs for compound dudley::DudleyDomain...
Generating docs for compound dudley::DudleyException...
Generating docs for compound dudley::ElementFile...
Generating docs for compound dudley::ElementFile_Jacobians...
Generating docs for compound dudley::NodeFile...
Generating docs for compound dudley::NodeMapping...
Generating docs for namespace dudley::util
Generating docs for namespace escript
Generating docs for compound escript::AbsMax...
Generating docs for compound escript::AbstractContinuousDomain...
Generating docs for compound escript::AbstractDomain...
Generating docs for compound escript::AbstractReducer...
Generating docs for compound escript::AbstractSystemMatrix...
Generating docs for compound escript::AbstractTransportProblem...
Generating docs for compound escript::AssertException...
Generating docs for compound escript::Data...
Generating docs for compound escript::DataAbstract...
Generating docs for compound escript::DataConstant...
Generating docs for compound escript::DataEmpty...
Generating docs for compound escript::DataException...
Generating docs for compound escript::DataExpanded...
Generating docs for compound escript::DataLazy...
Generating docs for compound escript::DataReady...
Generating docs for compound escript::DataTagged...
Generating docs for compound escript::Distribution...
Generating docs for compound escript::DomainException...
Generating docs for compound escript::EscriptParams...
Generating docs for compound escript::EsysException...
Generating docs for compound escript::FileWriter...
Generating docs for compound escript::FMax...
Generating docs for compound escript::FMin...
Generating docs for compound escript::FunctionSpace...
Generating docs for compound escript::FunctionSpaceException...
Generating docs for compound escript::IndexList...
Generating docs for compound escript::IOError...
Generating docs for compound escript::JMPI_...
Generating docs for compound escript::LapackInverseHelper...
Generating docs for compound escript::MPIDataReducer...
Generating docs for compound escript::MPIScalarReducer...
Generating docs for compound escript::NoCOMM_WORLD...
Generating docs for compound escript::NonReducedVariable...
Generating docs for compound escript::NotImplementedError...
Generating docs for compound escript::NullDomain...
Generating docs for compound escript::SolverBuddy...
Generating docs for compound escript::SplitWorld...
Generating docs for compound escript::SplitWorldException...
Generating docs for compound escript::SubWorld...
Generating docs for compound escript::SystemMatrixException...
Generating docs for compound escript::Taipan...
Generating docs for nested compound escript::Taipan::Taipan_MemTable...
Generating docs for nested compound escript::Taipan::Taipan_>] [89 </build/python-escript-rg4Iy
W/python-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_valet_a_2.pngInstall file: "escriptcore/src/DataVector.h" as "debian/stage3/include/escript/DataVector.h"
Install file: "escriptcore/src/Pointers.h" as "debian/stage3/include/escript/Pointers.h"
Install file: "escriptcore/src/WrappedArray.h" as "debian/stage3/include/escript/WrappedArray.h"
Install file: "escriptcore/src/ArrayOps.h" as "debian/stage3/include/escript/ArrayOps.h"
Install file: "escriptcore/src/ES_optype.h" as "debian/stage3/include/escript/ES_optype.h"
Install file: "escriptcore/src/LapackInverseHelper.h" as "debian/stage3/include/escript/LapackInverseHelper.h"
Install file: "paso/src/Paso.h" as "debian/stage3/include/paso/Paso.h"
Install file: "paso/src/PasoException.h" as "debian/stage3/include/paso/PasoException.h"
Install file: "paso/src/SharedComponents.h" as "debian/stage3/include/paso/SharedComponents.h"
Install file: "escriptcore/src/SystemMatrixException.h" as "debian/stage3/include/escript/SystemMatrixException.h"
Install file: "escriptcore/src/TransportProblemException.h" as "debian/stage3/include/escript/TransportProblemException.h"
Install file: "escriptcore/src/IndexList.h" as "debian/stage3/include/escript/IndexList.h"
>]Install file: "escriptcore/src/DataVectorAlt.h" as "debian/stage3/include/escript/DataVectorAlt.h"
Install file: "escriptcore/src/DataVectorTaipan.h" as "debian/stage3/include/escript/DataVectorTaipan.h"
Install file: "escriptcore/src/index.h" as "debian/stage3/include/escript/index.h"

Underfull \hbox (badness 10000) in paragraph at lines 197--202

[39] [40pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.3}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.276 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/simpleheat.png> 
</<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fig
ures/lumping_valet_u_1.png/<<PKGBUILDDIR>>/finley/src/FinleyDomain.h:187: warning: argument 'l0' of command @param is not found in the argument list of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi)
/<<PKGBUILDDIR>>/finley/src/FinleyDomain.h:187: warning: argument 'l1' of command @param is not found in the argument list of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi)
/<<PKGBUILDDIR>>/finley/src/FinleyDomain.h:204: warning: The following parameters of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) are not documented:
  parameter 'L0'
  parameter 'L1'
>])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example05.tex
Underfull \hbox (badness 10000) in paragraph at lines 18--25

[41pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.74 l30=
         Line(p3, p0) </<<PKGBUILDDIR>>/debian/t
mp3/posix/doc/cookbook/figures/anticlineheatrefraction.pngg++ -o debian/tmp3/posix/dudley/src/dudleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/dudleycpp.cpp
>] [90 </<<BUILDDIR>>/python-escript-5
.5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_du_1.png> </build/python-esc
ript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_
du_2.png/<<PKGBUILDDIR>>/ripley/src/Brick.h:68: warning: The following parameters of ripley::Brick::Brick(dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented:
  parameter 'points'
  parameter 'tags'
  parameter 'tagnamestonums'
  parameter 'w'
/<<PKGBUILDDIR>>/ripley/src/MultiBrick.h:68: warning: The following parameters of ripley::MultiBrick::MultiBrick(dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented:
  parameter 'points'
  parameter 'tags'
  parameter 'tagnamestonums'
  parameter 'w'
  parameter 'subdivisions'
>])) [91 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/user/figures/lumping_SUPG_u_1.png/<<PKGBUILDDIR>>/ripley/src/MultiRectangle.h:68: warning: The following parameters of ripley::MultiRectangle::MultiRectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented:
  parameter 'points'
  parameter 'tags'
  parameter 'tagnamestonums'
  parameter 'w'
  parameter 'subdivisions'
> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_u_1b.png/<<PKGBUILDDIR>>/ripley/src/Rectangle.h:68: warning: The following parameters of ripley::Rectangle::Rectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented:
  parameter 'points'
  parameter 'tags'
  parameter 'tagnamestonums'
  parameter 'w'
>]
[92 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/lumping_SUPG_u_2.png/<<PKGBUILDDIR>>/speckley/src/Brick.h:71: warning: The following parameters of speckley::Brick::Brick(int order, dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented:
  parameter 'order'
  parameter 'points'
  parameter 'tags'
  parameter 'tagnamestonums'
  parameter 'w'
>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/pyc
ad.tex/<<PKGBUILDDIR>>/speckley/src/Rectangle.h:69: warning: The following parameters of speckley::Rectangle::Rectangle(int order, dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented:
  parameter 'order'
  parameter 'points'
  parameter 'tags'
  parameter 'tagnamestonums'
  parameter 'w'
StatTable...
Generating docs for compound escript::TestDomain...
Generating docs for compound escript::TransportProblemException...
Generating docs for compound escript::ValueError...
Generating docs for compound escript::WrappedArray...
Generating docs for namespace escript::DataTypes
Generating docs for compound escript::DataTypes::DataVectorAlt...
Generating docs for compound escript::DataTypes::DataVectorTaipan...
Generating docs for namespace escript::reducerstatus
Generating docs for namespace finley
Generating docs for compound finley::AssembleParameters...
Generating docs for compound finley::ElementFile...
Generating docs for compound finley::ElementFile_Jacobians...
Generating docs for compound finley::FaceCenter...
Generating docs for compound finley::FinleyDomain...
Generating docs for compound finley::FinleyException...
Generating docs for compound finley::NodeFile...
Generating docs for compound finley::NodeMapping...
Generating docs for compound finley::QuadInfo...
Generating docs for compound finley::ReferenceElement...
Generating docs for compound finley::ReferenceElementInfo...
Generating docs for compound finley::ReferenceElementSet...
Generating docs for compound finley::ShapeFunction...
Generating docs for compound finley::ShapeFunctionInfo...
Generating docs for namespace finley::util
Generating docs for namespace paso
Generating docs for compound paso::Connector...
Generating docs for compound paso::Coupler...
Generating docs for compound paso::DegreeAndIdx...
Generating docs for compound paso::FCT_FluxLimiter...
Generating docs for compound paso::FCT_Solver...
Generating docs for compound paso::Function...
Generating docs for compound paso::LinearSystem...
Generating docs for compound paso::Options...
Generating docs for compound paso::PasoException...
Generating docs for compound paso::Pattern...
Generating docs for compound paso::Performance...
Generating docs for compound paso::Preconditioner...
Generating docs for compound paso::Preconditioner_LocalSmoother...
Generating docs for compound paso::Preconditioner_Smoother...
Generating docs for compound paso::ReactiveSolver...
Generating docs for compound paso::SharedComponents...
Generating docs for compound paso::Solver_ILU...
Generating docs for compound paso::Solver_RILU...
Generating docs for compound paso::SparseMatrix...
Generating docs for compound paso::SystemMatrix...
Generating docs for compound paso::SystemMatrixPattern...
Generating docs for compound paso::TransportProblem...
Generating docs for compound paso::UMFPACK_Handler...
Generating docs for namespace paso::util
Generating docs for namespace ripley
Generating docs for compound ripley::AbstractAssembler...
Generating docs for compound ripley::Brick...
Generating docs for compound ripley::DefaultAssembler2D...
Generating docs for compound ripley::DefaultAssembler3D...
Generating docs for compound ripley::DiracPoint...
Generating docs for compound ripley::LameAssembler2D...
Generating docs for compound ripley::LameAssembler3D...
Generating docs for compound ripley::MultiBrick...
Generating docs for compound ripley::MultiRectangle...
Generating docs for compound ripley::ReaderParameters...
Generating docs for compound ripley::Rectangle...
Generating docs for compound ripley::RipleyDomain...
Generating docs for compound ripley::RipleyException...
Generating docs for compound ripley::SystemMatrix...
Generating docs for compound ripley::WaveAssembler2D...
Generating docs for compound ripley::WaveAssembler3D...
Generating docs for namespace speckley
Generating docs for compound speckley::AbstractAssembler...
Generating docs for compound speckley::Brick...
Generating docs for compound speckley::DefaultAssembler2D...
Generating docs for compound speckley::DefaultAssembler3D...
Generating docs for compound speckley::DiracPoint...
Generating docs for compound speckley::ReaderParameters...
Generating docs for compound speckley::Rectangle...
Generating docs for compound speckley::RipleyCoupler...
Generating docs for nested compound speckley::RipleyCoupler::Ripley...
Generating docs for compo
Chapter 5.

LaTeX Warning: Citation `GMSH' on page 93 undefined on input line 24.

[93]

LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 89.


LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 133.


LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 145.


LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 154.

[94] [95 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
/user/figures/quad.pdf>] [96 </<<PKGBUILDDIR>>/d
ebian/tmp3/posix/doc/user/figures/trapezoid.pdf>] [97 </build/python-escript-rg
4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/brick.pdf>] [98 </bu
ild/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures
/refine.pdf>] [99] [100]

LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 579.


LaTeX Warning: Citation `RIGHTHANDRULE' on page 101 undefined on input line 600
.

[101]

LaTeX Warning: Citation `GMSH' on page 102 undefined on input line 682.

[102]

LaTeX Warning: Citation `GMSH' on page 103 undefined on input line 698.


LaTeX Warning: Citation `IDEAS' on page 103 undefined on input line 702.


LaTeX Warning: Citation `VRML' on page 103 undefined on input line 706.


LaTeX Warning: Citation `STL' on page 103 undefined on input line 710.


LaTeX Warning: Citation `NASTRAN' on page 103 undefined on input line 714.


LaTeX Warning: Citation `MEDIT' on page 103 undefined on input line 718.


LaTeX Warning: Citation `CGNS' on page 103 undefined on input line 722.


LaTeX Warning: Citation `PLOT3D' on page 103 undefined on input line 726.


LaTeX Warning: Citation `DIFFPACK' on page 103 undefined on input line 730.


LaTeX Warning: Citation `GMSH' on page 103 undefined on input line 734.


LaTeX Warning: Citation `TETGEN' on page 103 undefined on input line 734.


LaTeX Warning: Citation `GMSH' on page 103 undefined on input line 738.


LaTeX Warning: Citation `NETGEN' on page 103 undefined on input line 742.

[103] [104]) [105]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Mod
els.tex [106]
Chapter 6.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sto
kessolver.tex

LaTeX Warning: Citation `AAMIRBERKYAN2008' on page 107 undefined on input line 
69.


LaTeX Warning: Citation `MBENZI2005' on page 107 undefined on input line 69.

[107]

LaTeX Warning: Citation `ELMAN' on page 108 undefined on input line 148.

[108] [109] [110]

LaTeX Warning: Citation `LBB' on page 111 undefined on input line 334.

[111])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dar
cyflux.tex [112] [113] [114 </<<PKGBUILDDIR>>/de
bian/tmp3/posix/doc/user/figures/darcy_result.png (PNG copy)>])

LaTeX Warning: Citation `Muhlhaus2005' on page 115 undefined on input line 28.


LaTeX Warning: Citation `Muhlhaus2005' on page 115 undefined on input line 55.

[115] [116]

LaTeX Warning: Citation `LBB' on page 117 undefined on input line 206.

[117]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fau
ltsystem.tex [118und speckley::SpeckleyDomain...
Generating docs for compound speckley::SpeckleyException...
Generating docs for compound speckley::WaveAssembler2D...
Generating docs for compound speckley::WaveAssembler3D...
Generating docs for namespace weipa
Generating docs for compound weipa::DataVar...
Generating docs for compound weipa::DomainChunk...
Generating docs for compound weipa::ElementData...
Generating docs for compound weipa::EscriptDataset...
Generating docs for compound weipa::FinleyDomain...
Generating docs for compound weipa::FinleyElementInfo...
Generating docs for compound weipa::FinleyElements...
Generating docs for compound weipa::FinleyNodes...
Generating docs for compound weipa::NodeData...
Generating docs for compound weipa::QuadMaskInfo...
Generating docs for compound weipa::RipleyDomain...
Generating docs for compound weipa::RipleyElements...
Generating docs for compound weipa::RipleyNodes...
Generating docs for compound weipa::SpeckleyDomain...
Generating docs for compound weipa::SpeckleyElements...
Generating docs for compound weipa::SpeckleyNodes...
Generating docs for compound weipa::VarInfo...
Generating docs for compound weipa::VisItData...
Generating docs for compound weipa::WeipaException...
Generating docs for namespace weipa::VisItControl
Generating graph info page...
Generating directory documentation...
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running plantuml with JAVA...
lookup cache used 19428/65536 hits=324133 misses=20142
finished...
 </<<PKGBUILDDIR>>/debian/tmp3/
posix/doc/user/figures/FaultSystem2D.pdf>] [119] [120] [121])) [122]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
ley.tex
Chapter 7.

LaTeX Warning: Reference `Zienc,NumHand' on page 123 undefined on input line 74
.

[123]
Underfull \vbox (badness 1226) has occurred while \output is active [124 </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/F
inleyMesh.pdf>] [125 </<<PKGBUILDDIR>>/debian/tm
p3/posix/doc/user/figures/FinleyContact.pdf>] [126]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
leyelements.tex) [127] [128]
Underfull \hbox (badness 1910) in paragraph at lines 383--383
[]\OT1/ptm/m/n/10 Table 7.2: Solvers avail-able for [] and the \OT1/pcr/m/n/10 
PASO [][]\OT1/ptm/m/n/10 pack-age and the rel-e-vant op-tions in

Underfull \vbox (badness 1337) has occurred while \output is active [129 </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/F
inleyMacroLeg.pdf> </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/user/figures/FinleyMacroTri.pdf> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/user/figures/FinleyMacroRec.pdf>]g++ -o debian/tmp3/posix/dudley/src/Assemble_AverageElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_AverageElementData.cpp


LaTeX Warning: Citation `GMSH' on page 130 undefined on input line 444.


LaTeX Warning: Citation `GMSH' on page 130 undefined on input line 456.

[130]) [131]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/rip
ley.tex [132]
Chapter 8.
[133] [134 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/user/figures/RipleyMesh.pdf>]) [135]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/spe
ckley.tex [136]
Chapter 9.
[137]) [138 </<<PKGBUILDDIR>>/debian/tmp3/posix/
doc/user/figures/speckley3.png (PNG copy)> </<<BUILDDIR>>/python
-escript-5.5/debian/tmp3/posix/doc/user/figures/speckley6.png (PNG copy)> </bui
ld/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/
speckley9.png (PNG copy)>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wei
pa.tex
Chapter 10.
[139]

LaTeX Warning: Citation `GOCAD' on page 140 undefined on input line 136.

[140]

LaTeX Warning: Citation `VisIt' on page 141 undefined on input line 174.

[141]) [142]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/tri
linos.tex
Chapter 11.

LaTeX Warning: Citation `TrilinosWeb' on page 143 undefined on input line 18.

[143] [144]

LaTeX Warning: Citation `Briggs2000' on page 145 undefined on input line 164.

[145]

LaTeX Warning: Citation `Briggs2000' on page 146 undefined on input line 188.


LaTeX Warning: Citation `Stuben2001281' on page 146 undefined on input line 188
.


LaTeX Warning: Citation `Vanek1996' on page 146 undefined on input line 188.


LaTeX Warning: Citation `Tuminaro2000' on page 146 undefined on input line 188.



LaTeX Warning: Citation `TrilinosWeb' on page 146 undefined on input line 205.

[146] [147]
Underfull \hbox (badness 10000) in paragraph at lines 266--271


Overfull \hbox (0.87425pt too wide) in paragraph at lines 278--279
[]\OT1/pcr/m/n/10 "Elasticity-2D" and "Elasticity-3D"\OT1/ptm/m/n/10 : us-ing s
moothed ag-gre-ga-tion, Cheby-shev smoother and
[148]>] [149]
Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88
\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for
 the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th
e []
[42] [43pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.5}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.134 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/heatrefraction.png [150]>]
Underfull \hbox (badness 10000) in paragraph at lines 137--142

[44] [45pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.6}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.199 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/heatrefractiontdp.png
Overfull \hbox (63.16116pt too wide) in paragraph at lines 454--455
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 

Overfull \hbox (3.76056pt too wide) in paragraph at lines 464--465
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][] 

Overfull \hbox (63.16116pt too wide) in paragraph at lines 466--467
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 
[151]) [152> </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/heatrefractiontgdp.pn
g]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sym
bolic.tex
Chapter 12.

LaTeX Warning: Citation `Sympy' on page 153 undefined on input line 20.


Underfull \vbox (badness 10000) has occurred while \output is active [153]> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookb
ook/figures/heatrefractiontcdp.png
[154]> </<<BUILDDIR>>/python-escrip
t-5.5/debian/tmp3/posix/doc/cookbook/figures/heatrefractionhf.png

LaTeX Warning: `!h' float specifier changed to `!ht'.

[155] [156 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/user/figures/0RotAniso.png> </<<PKGBUILDDIR>>
/debian/tmp3/posix/doc/user/figures/0RotIso.png>]> </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/user/figures/MidRotAniso.png> </build/
python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Mid
RotIso.png> </<<PKGBUILDDIR>>/debian/tmp3/posix/
doc/user/figures/diffaniso.png
Underfull \hbox (badness 10000) in paragraph at lines 202--209


Overfull \hbox (7.5533pt too wide) in paragraph at lines 210--216
[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion [][]3.3[][
]. To show sub-domains, we need to go back to []
[46] [47pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.7}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.291 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/heatrefractionflux.png>] [157]) [158]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sub
worlds.tex
Chapter 13.
[159] [160] [161]) [162]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/app
endix.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/not
ation.tex
Appendix A.
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cha
nges.tex [163] [164]
Appendix B.
[165] [166] [167] [168] [169] [170]>]
Underfull \hbox (badness 10000) in paragraph at lines 294--299

[48pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.305 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/heatrefraction2flux.png [171])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/com
pletedevs.tex [172]
Appendix C.
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/our
refs.tex [173] [174]
Appendix D.
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty) [175])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/py3
.tex [176]
Appendix E.
)) [177] [178]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.ind [179] [180] [181]) [182]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.bbl [183]) [184]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Tut
orialPDE.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/exe
cute.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esc
ript.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lin
earPDE.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/pyc
ad.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Mod
els.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
ley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/rip
ley.aux)>])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/spe
ckley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wei
pa.aux
Chapter 5.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example07.tex)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/tri
linos.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sym
bolic.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sub
worlds.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/app
endix.aux))

Package rerunfilecheck Warning: File `user.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Warning: There were undefined references.


LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.

 )
(see the transcript file for additional information){/usr/share/texlive/texmf-d
ist/fonts/enc/dvips/base/8r.enc}</usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmbx10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmbx8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmex10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cmextra
/cmex8.pfb> [49</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10
.pfb]></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi6.pfb></usr/sha
re/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi7.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi8.pfb></usr/share/texlive/tex
mf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pfb></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/
type1/public/amsfonts/cm/cmr5.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmr6.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm
/cmr8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pf
b></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></us
r/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share
/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy7.pfb
Underfull \hbox (badness 10000) in paragraph at lines 154--155


Underfull \hbox (badness 10000) in paragraph at lines 154--155

[50></usr/share/texliv
e/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy8.pfb></usr/share/texlive/texmf
-dist/fonts/type1/public/amsfonts/cm/cmsy9.pfb>]</usr/share/texlive/texmf-dist/f
onts/type1/public/amsfonts/latxfont/lcircle1.pfb></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/latxfont/lcirclew.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/latxfont/line10.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/latxfont/linew10.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/symbols/msam7.pfb></usr/share/texlive/texmf-dis
t/fonts/type1/public/amsfonts/symbols/msbm10.pfb></usr/share/texlive/texmf-dist
/fonts/type1/urw/courier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/
urw/courier/ucrr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/u
crro8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb><
/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb></usr/share/texlive/texm
f-dist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/ty
pe1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/u
tmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb></us
r/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb></usr/share/texlive
/texmf-dist/fonts/type1/urw/times/utmri8a.pfb> [51]
Output written on user.pdf (184 pages, 2640343 bytes).
Transcript written on user.log.
cd debian/tmp3/posix/doc/user && makeindex user.idx

Underfull \hbox (badness 10000) in paragraph at lines 279--280


Underfull \hbox (badness 10000) in paragraph at lines 279--280

[52pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.280 
       </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/c
ookbook/figures/sourceline.pngThis is makeindex, version 2.15 [TeX Live 2019] (kpathsea + Thai support).
Scanning input file user.idx....done (716 entries accepted, 12 rejected).
Sorting entries........done (7122 comparisons).
Generating output file user.ind....done (353 lines written, 0 warnings).
Output written in user.ind.
Transcript written in user.ilg.
cd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
>]entering extended mode
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esy
sdoc.cls
Document Class: esysdoc 
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) [53

Package geometry Warning: Over-specification in `h'-direction.
    `width' (478.00812pt) is ignored.

)] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty))
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty [54pdfTeX warning (ext4): destination wi
th the same identifier (name{figure.5.2}) has been already used, duplicate igno
red

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.122 \chapter
              {Seismic Wave Propagation} </<<BUILDDIR>>/python-e
script-5.5/debian/tmp3/posix/doc/cookbook/figures/ex07usamp.png (PNG copy)> </b
uild/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/fi
gures/ex07jsamp.png (PNG copy)> </<<BUILDDIR>>/python-escript-5.
5/debian/tmp3/posix/doc/cookbook/figures/ex07nsamp.png (PNG copy)>]
Chapter 6.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example08.tex
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
Underfull \hbox (badness 10000) in paragraph at lines 18--24

[55
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)]))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty)
(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)
Underfull \hbox (badness 10000) in paragraph at lines 139--145

[56
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)pdfTeX warning (ext4): destination with the same identifier (name{table.6.1}
) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.156 #
        set initial values for first two time steps with source terms]
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty [57)]
[58pdfTeX warning (ext4): destination with the same identifier (name{figure.6.1
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.214 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex08pw50.png) (PNG copy)> </build/python-escript-rg4Iy
W/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08pw350.png (PNG 
copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/c
ookbook/figures/ex08pw650.png (PNG copy)> </<<BUILDDIR>>/python-
escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08pw950.png (PNG copy)>]
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r_defs.tex (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty
****************************************
* Local config file subfigure.cfg used *
****************************************
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)
Underfull \hbox (badness 10000) in paragraph at lines 218--223

[59)pdfTeX warning (ext4): destination with the same identifier (name{figure.6.2
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.273 t=
        t+h; n=n+1 </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/cookbook/figures/source.png
(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty)
\@input{elist.aux}

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/eli
st.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty
Package `listing', V1.2, <1999/05/25>
))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/ver
info.tex)
Writing index file user.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Tut
orialPDE.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/exe
cute.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esc
ript.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lin
earPDE.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/pyc
ad.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Mod
els.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
ley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/rip
ley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/spe
ckley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wei
pa.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/tri
linos.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sym
bolic.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sub
worlds.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/app
endix.aux)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)>]
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))

Package natbib Warning: Citation `Cerjan1985' on page 60 undefined on input lin
e 293.

[60]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cop
yrights.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) [61pdfTeX warning (ext4): destination with the same identifier (name{figur
e.6.3}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.392 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex08babc.png
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/doc
guide.tex [2]) [3] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)
[4]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cur
rentdev.tex [5]) [6]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.toc [7]>] [62 [8pdfTeX warning (ext4): destination 
with the same identifier (name{figure.6.4}) has been already used, duplicate ig
nored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.392 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex08sw060.png (PNG copy)> </build/python-escript-rg4I
yW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08sw320.png (PNG
 copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/
cookbook/figures/ex08sw660.png (PNG copy)> </<<BUILDDIR>>/python
-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08sw880.png (PNG copy)>]] [9]) [10]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Tut
orialPDE.tex
Chapter 1.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fir
ststep.tex
Underfull \hbox (badness 10000) in paragraph at lines 395--399

) [63pdfTeX warning (ext4): destination with the same identifier (name{figure.6
.5}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.125 \chapter
              {3D Seismic Wave Propagation} </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/gmsh-example08c.png (PNG c
opy)>] [64pdfTeX warning (ext4): destination with the same identifier (name{fig
ure.6.6}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.125 \chapter
              {3D Seismic Wave Propagation} </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08c2601.png (PNG copy)>]
Chapter 7.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example09.tex [11 </<<PKGBUILDDIR>>/debian/tmp3/pos
ix/doc/user/figures/FirstStepDomain.pdf>]

LaTeX Warning: Reference `Zienc,NumHand' on page 12 undefined on input line 148
.

[12] (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty
Underfull \hbox (badness 10000) in paragraph at lines 17--21

[65]) [13 </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/F
irstStepMesh.pdf>] [66] [67] [68 </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/cookbook/figures/gmsh-example09m.png (PNG copy)> </build/python-escr
ipt-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/gmsh-examp
le09msh2d.png (PNG copy)> </<<PKGBUILDDIR>>/debi
an/tmp3/posix/doc/cookbook/figures/gmsh-example09msh3d.png (PNG copy)>]
[69pdfTeX warning (ext4): destination with the same identifier (name{figure.7.1
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.186 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/gmsh-example09lc.png (PNG copy)>]
Underfull \hbox (badness 10000) in paragraph at lines 202--209


Overfull \hbox (25.36078pt too wide) in paragraph at lines 222--223
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 
) [70] [71 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/cookbook/figures/ex09b00201.png (PNG copy)> </<<BUILDDIR>>/py
thon-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex09b00341.png (PNG cop
y)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cook
book/figures/ex09b00440.png (PNG copy)>] [72]
Chapter 8.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example10.tex

Package natbib Warning: Citation `Blakely1995' on page 73 undefined on input li
ne 27.

[73] [74] [14]
Underfull \hbox (badness 10000) in paragraph at lines 93--97

[75] [76pdfTeX warning (ext4): destination with the same identifier (name{figur
e.8.1}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.177 \clearpage
                pdfTeX warning (ext4): destination with the same identifier (na
me{figure.8.2}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.177 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/mayavi2_openfile.png [15] [16 </<<BUILDDIR>>/python-escript-5
.5/debian/tmp3/posix/doc/user/figures/FirstStepResultMATPLOTLIB.pdf>]> </<<BUILDDIR>>/p
ython-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/mayavi2_data.png [17 </bui
ld/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/
FirstStepResult.pdf>])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dif
fusion.tex [18 </<<PKGBUILDDIR>>/debian/tmp3/pos
ix/doc/user/figures/DiffusionDomain.pdf>] [19] [20]>]
[77pdfTeX warning (ext4): destination with the same identifier (name{figure.8.3
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.177 \clearpage
                pdfTeX warning (ext4): destination with the same identifier (na
me{figure.8.4}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.177 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/mayavi2_cell2point.png [21] [22])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wav
e.tex [23 </<<PKGBUILDDIR>>/debian/tmp3/posix/do
c/user/figures/DiffusionRes1.pdf> </<<BUILDDIR>>/python-escript-
5.5/debian/tmp3/posix/doc/user/figures/DiffusionRes16.pdf> </build/python-escri
pt-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/DiffusionRes32.
pdf> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/use
r/figures/DiffusionRes48.pdf>] [24 </<<BUILDDIR>>/python-escript
-5.5/debian/tmp3/posix/doc/user/figures/waveu.pdf, page is rotated 90 degrees>]
 [25 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/use
r/figures/wavea.pdf, page is rotated 90 degrees>] [26> </<<BUILDDIR>>
/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10apot.png (PNG co
py)>]]
Underfull \hbox (badness 10000) in paragraph at lines 180--184

[78] [79pdfTeX warning (ext4): destination with the same identifier (name{figur
e.8.5}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.246 \clearpage
                pdfTeX warning (ext4): destination with the same identifier (na
me{figure.8.6}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.246 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10bpot.png (PNG copy)> </build/python-escript-rg4Iy
W/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10bpot2.png (PNG 
copy)>] [80pdfTeX warning (ext4): destination with the same identifier (name{fi
gure.8.7}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.246 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10p_boundeff.pdf>] [27]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [28 </build/python-e
script-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Wave11.pdf>
 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fi
gures/Wave22.pdf> </<<PKGBUILDDIR>>/debian/tmp3/
posix/doc/user/figures/Wave28.pdf> </<<BUILDDIR>>/python-escript
-5.5/debian/tmp3/posix/doc/user/figures/Wave32.pdf> </build/python-escript-rg4I
yW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Wave36.pdf>]
Underfull \hbox (badness 10000) in paragraph at lines 275--281

[81])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/hea
tedblock.tex [29 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/user/figures/WavePC.pdf, page is rotated 90 degrees>] [30] [82] [83pdfTeX warning (ext4): destination with the same identifier (name{
figure.8.8}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.406 \clearpage
                pdfTeX warning (ext4): destination with the same identifier (na
me{figure.8.9}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.406 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10m_geo.png (PNG copy)> </build/python-escript-rg4I
yW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10m_msh.png (PNG
 copy)>] [31 [84pdfTeX warning (ext4): destination with the same identifier (name{f
igure.8.10}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.449 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10q_boundeff.pdf]>])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sto
kesflow.tex [85pdfTeX warning (ext4): destin
ation with the same identifier (name{figure.8.11}) has been already used, dupli
cate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.449 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10q_boundeff_zoom.pdf>]) [86] [32
Chapter 9.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example11.tex </<<PKGBUILDDIR>>/debian/tmp3/po
six/doc/user/figures/HeatedBlock.pdf>]

Package natbib Warning: Citation `Loke2004' on page 87 undefined on input line 
24.


Underfull \hbox (badness 10000) in paragraph at lines 61--62


Underfull \hbox (badness 10000) in paragraph at lines 61--62


Package natbib Warning: Citation `Farias2010' on page 87 undefined on input lin
e 73.


Package natbib Warning: Citation `Honig2007' on page 87 undefined on input line
 73.

)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook.bbl [87] [88pdfTeX warning (ext4): destination with the same identifi
er (name{figure.9.1}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.1 \begin{thebibliography}{5}
                               </<<PKGBUILDDIR>>
/debian/tmp3/posix/doc/cookbook/figures/ex11cstreamline.png (PNG copy)>])

Package natbib Warning: There were undefined citations.

[89]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook.aux

Package natbib Warning: Citation(s) may have changed.
(natbib)                Rerun to get citations correct.

)

Package rerunfilecheck Warning: File `cookbook.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Warning: There were multiply-defined labels.

 )
(see the transcript file for additional information)pdfTeX warning (dest): name
{Hfootnote.36} has been referenced but does not exist, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.35} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.34} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.33} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.32} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.31} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.30} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.29} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.28} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.27} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.26} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.25} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.24} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.23} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.22} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.21} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.20} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.19} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.18} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.17} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.16} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.15} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.14} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.13} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.12} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.11} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.10} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.9} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.8} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.7} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.6} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.5} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.4} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.3} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.2} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.1} has been referenced but does not exist
, replaced by a fixed one

{ [33/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc}</usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb]></usr/share/texlive/texmf-
dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/f
onts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-dist/fonts/ty
pe1/public/amsfonts/cm/cmmi6.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmmi8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr5.
pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr6.pfb></us
r/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/share/
texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-
dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share/texlive/texmf-dist/fo
nts/type1/public/amsfonts/cm/cmsy7.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmsy8.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/symbols/msam10.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/c
ourier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrr8a
.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb></usr/s
hare/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/texlive
/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb></usr/share/texlive/texmf-dist
/fonts/type1/urw/times/utmb8a.pfb)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sli
p.tex></usr/share/texlive/texmf-dist/fonts/type1/ur
w/times/utmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a
.pfb [34></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb]> [35 </<<PKGBUILDDIR>>/debian/tmp3/pos
ix/doc/user/figures/stokes-fluid-t01.pdf> </<<BUILDDIR>>/python-
escript-5.5/debian/tmp3/posix/doc/user/figures/stokes-fluid-t10.pdf> </build/py
thon-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/stoke
s-fluid-t20.pdf>
Output written on cookbook.pdf (89 pages, 4391412 bytes).
Transcript written on cookbook.log.
 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/user/figures/stokes-fluid-t30.pdf> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/user/figures/stokes-fluid-t40.pdf> </build/
python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/sto
kes-fluid-t50.pdf>]cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex
 [36 </<<PKGBUILDDIR>>/debian
/tmp3/posix/doc/user/figures/Slip1.pdf>]This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/esysdoc.cls
Document Class: esysdoc 
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))

Package geometry Warning: Over-specification in `h'-direction.
    `width' (478.00812pt) is ignored.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty [37]
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dir
ac.tex)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty [38
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/user/figures/Slip2.png))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty)
(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook_defs.tex
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty
****************************************
* Local config file subfigure.cfg used *
****************************************
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)
(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty)
(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def))
(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty)
(/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty)
(/usr/share/texlive/texmf-dist/tex/latex/cite/chapterbib.sty)
\gdef\@extra@binfo{@-1}\@writefile{toc}{\gdef \the@ipfilectr{@-1}}\@writefile{l
of}{\gdef \the@ipfilectr{@-1}}\@writefile{lot}{\gdef \the@ipfilectr{@-1}}
\@input{elist.aux}

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/elist.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty
Package `listing', V1.2, <1999/05/25>
))
\gdef\@extra@binfo{}\@writefile{toc}{\gdef \the@ipfilectr{}}\@writefile{lof}{\g
def \the@ipfilectr{}}\@writefile{lot}{\gdef \the@ipfilectr{}}
) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/verinfo.tex)
Writing index file cookbook.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook.aux

LaTeX Warning: Label `NEUMAN 2b' multiply defined.


LaTeX Warning: Label `fig:ex08pw' multiply defined.


LaTeX Warning: Label `fig:gmsh3dmsh' multiply defined.


LaTeX Warning: Label `sub@fig:gmsh3dmsh' multiply defined.


LaTeX Warning: Label `fig:ex9b 201' multiply defined.


LaTeX Warning: Label `sub@fig:ex9b 201' multiply defined.


LaTeX Warning: Label `fig:ex9b 201' multiply defined.


LaTeX Warning: Label `sub@fig:ex9b 201' multiply defined.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/docguide.tex [2]) [3] [4]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/currentdev.tex [5]) [6]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook.toc [7]) [8]>]
Chapter 1.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/intro.tex [9]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/quickstart.tex)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/escpybas.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd))) [39 </<<BUILDDIR>>/python-escript-
5.5/debian/tmp3/posix/doc/user/figures/diracplot.png))
[10]
Chapter 2.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example01.tex
Underfull \vbox (badness 2698) has occurred while \output is active [11pdfTeX w
arning (ext4): destination with the same identifier (name{figure.2.1}) has been
 already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.47 \end{equation}
                    </<<PKGBUILDDIR>>/debian/tmp
3/posix/doc/cookbook/figures/onedheatdiff001.pdf>] [12]
Underfull \hbox (badness 4353) in paragraph at lines 185--185
[][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able 
at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound
ary _
[13] [14pdfTeX warning (ext4): destination with the same identifier (name{figur
e.2.2}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.313 T
       here are various ways to construct domain objects. The simplest form ...
 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookboo
k/figures/workflow.png>] [15pdfTeX warning (ext4): destination with the same id
entifier (name{figure.2.3}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.313 T
       here are various ways to construct domain objects. The simplest form ...
 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookboo
k/figures/functionspace.pdf>] [16]
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty)
Underfull \hbox (badness 10000) in paragraph at lines 415--425

[17]>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/exe
cute.tex [40]
Chapter 2.
[41] [42]) [43 [18]] [44]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esc
ript.tex
Chapter 3.
[45]
Underfull \hbox (badness 10000) in paragraph at lines 604--605


Underfull \hbox (badness 10000) in paragraph at lines 604--605

[19]
Underfull \hbox (badness 1648) in paragraph at lines 79--79
[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac
es in []. An ar-row in-di-cates that a func-tion in the
[46 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/EscriptDiagram1.pdf>] [20pdfTeX warning (ext4): destination with the same identifier (name{figur
e.2.4}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.680 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ttblockspyplot150.png [47]>] [48] [49 </<<BUILDDIR>>/pyth
on-escript-5.5/debian/tmp3/posix/doc/user/figures/EscriptDiagram2.pdf>]
Underfull \hbox (badness 10000) in paragraph at lines 684--692


LaTeX Warning: Float too large for page by 10.55325pt on input line 775.

[21] [22pdfTeX warning (ext4): destination with the same identifier (name{figur
e.2.5}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.776 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/blockspyplot001.png
[50] [51] [52]> </<<BUILDDIR>>/py
thon-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/blockspyplot050.png [53] [54> </
<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook/f
igures/blockspyplot200.png]
Underfull \vbox (badness 1348) has occurred while \output is active [55]>]
[56] [57] [58]
Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][]
[][][][][][][][][][][][][][][][][][][][][][][][][] 
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example02.tex [59]
Underfull \hbox (badness 10000) in paragraph at lines 17--19

[23] [60] [61] [62] [24pdfTeX warning (ext4): destination with the same identifier (name{figur
e.2.6}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.109 \end{python}
                   </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/cookbook/figures/onedheatdiff002.pdf>] [63

LaTeX Warning: Float too large for page by 10.55325pt on input line 146.

)] [25pdfTeX warning (ext4): destination with the same identifier (name{figure.2
.7}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.108 \chapter
              {Heat Diffusion in Two Dimensions} </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ttrodpyplot150.png>] [64
[26pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.108 \chapter
              {Heat Diffusion in Two Dimensions} </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/rodpyplot001.png]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) [65]
Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 
[66> </b
uild/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/fi
gures/rodpyplot050.png]
Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743
\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st
ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 
and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . 
[67]> </<<PKGBUILDDIR>>/debian
/tmp3/posix/doc/cookbook/figures/rodpyplot200.png [68] [69] [70]>]
Chapter 3.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example03.tex [71]
Underfull \hbox (badness 10000) in paragraph at lines 22--23


Underfull \hbox (badness 10000) in paragraph at lines 22--23

[27] [72] [28pdfTeX warning (ext4): destination with the same identifier (name{figur
e.3.1}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.141 \begin{python}
                     </<<PKGBUILDDIR>>/debian/tm
p3/posix/doc/cookbook/figures/twodheatdiff.pdf>]g++ -o debian/tmp3/posix/dudley/src/Assemble_CopyElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_CopyElementData.cpp


LaTeX Warning: Float too large for page by 12.55325pt on input line 232.

[29] [73]) [74]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lin
earPDE.tex
Chapter 4.
[75] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [76]
Overfull \hbox (46.961pt too wide) in paragraph at lines 286--287
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 


Underfull \hbox (badness 10000) in paragraph at lines 306--311

[30]
Overfull \hbox (18.97215pt too wide) in paragraph at lines 180--182
\OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in-
di-cates that it is un-de-fined. For more de-tails on \OT1/pcr/m/n/10 SolverOpt
ions
[77) [31]] [32pdfTeX warning (ext4): destination with the same identifier (name
{figure.3.2}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.112 \chapter
              {Complex Geometries} </<<BUILDDIR>>/python-escript
-5.5/debian/tmp3/posix/doc/cookbook/figures/heatrefraction001.png [78] [79] [80]> </build/pyth
on-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/hea
trefraction030.png [81]

LaTeX Warning: Reference `TAB FINLEY SOLVER OPTIONS 2' on page 82 undefined on 
input line 566.

[82] [83] [84] [85] [86]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lum
ping.tex> </<<PKGBUILDDIR>>/debian/tmp
3/posix/doc/cookbook/figures/heatrefraction200.png [87] [88 </<<PKGBUILDDIR>>/debian/tmp3/
posix/doc/user/figures/lumping_valet_a_1.png>] [33pdfTeX warning (ext4): 
destination with the same identifier (name{figure.3.3}) has been already used, 
duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.112 \chapter
              {Complex Geometries}pdfTeX warning (ext4): destination with the s
ame identifier (name{figure.3.4}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.112 \chapter
              {Complex Geometries} </<<BUILDDIR>>/python-escript
-5.5/debian/tmp3/posix/doc/cookbook/figures/ScreeshotMayavi2n1.png>] [89 </build/python-escript-rg4Iy
W/python-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_valet_a_2.png> </build/pyt
hon-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/Sc
reeshotMayavi2n2.png>] [34]
Chapter 4.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example04.tex> 
</<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fig
ures/lumping_valet_u_1.png
Underfull \hbox (badness 10000) in paragraph at lines 37--41

[35] [36pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.1}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.139 \begin{python}
                     </<<PKGBUILDDIR>>/debian/tm
p3/posix/doc/cookbook/figures/pycadrec.pdf>]>] [90 </<<BUILDDIR>>/python-escript-5
.5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_du_1.png [37] [38pdfTeX warning (ext4): des
tination with the same identifier (name{figure.4.2}) has been already used, dup
licate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.194 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/simplemesh.png> </build/python-esc
ript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_
du_2.png>])) [91 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/user/figures/lumping_SUPG_u_1.png> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_u_1b.png>]>]
[92 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/lumping_SUPG_u_2.png
Underfull \hbox (badness 10000) in paragraph at lines 197--202

[39] [40pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.3}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.276 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/simpleheat.png>])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example05.tex>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/pyc
ad.tex
Underfull \hbox (badness 10000) in paragraph at lines 18--25

[41pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.74 l30=
         Line(p3, p0) </<<PKGBUILDDIR>>/debian/t
mp3/posix/doc/cookbook/figures/anticlineheatrefraction.png
Chapter 5.
[93] [94] [95 </<<PKGBUILDDIR>>/debian/tmp3/posi
x/doc/user/figures/quad.pdf>] [96 </<<BUILDDIR>>/python-escript-
5.5/debian/tmp3/posix/doc/user/figures/trapezoid.pdf>] [97 </build/python-escri
pt-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/brick.pdf>]
[98 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/refine.pdf>] [99] [100] [101] [102] [103] [104]) [105]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Mod
els.tex [106]
Chapter 6.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sto
kessolver.tex [107] [108] [109] [110] [111])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dar
cyflux.tex [112] [113] [114 </<<PKGBUILDDIR>>/de
bian/tmp3/posix/doc/user/figures/darcy_result.png (PNG copy)>]) [115] [116]
[117]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fau
ltsystem.tex [118 </<<PKGBUILDDIR>>/debian/tmp3/
posix/doc/user/figures/FaultSystem2D.pdf>] [119] [120] [121])) [122]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
ley.tex
Chapter 7.

LaTeX Warning: Reference `Zienc,NumHand' on page 123 undefined on input line 74
.

[123]
Underfull \vbox (badness 1226) has occurred while \output is active [124 </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/F
inleyMesh.pdf>] [125 </<<PKGBUILDDIR>>/debian/tm
p3/posix/doc/user/figures/FinleyContact.pdf>] [126]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
leyelements.tex) [127] [128]
Underfull \hbox (badness 1910) in paragraph at lines 383--383
[]\OT1/ptm/m/n/10 Table 7.2: Solvers avail-able for [] and the \OT1/pcr/m/n/10 
PASO [][]\OT1/ptm/m/n/10 pack-age and the rel-e-vant op-tions in

Underfull \vbox (badness 1337) has occurred while \output is active [129 </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/F
inleyMacroLeg.pdf> </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/user/figures/FinleyMacroTri.pdf> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/user/figures/FinleyMacroRec.pdf>] [130])
[131]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/rip
ley.tex [132]
Chapter 8.
[133] [134 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/user/figures/RipleyMesh.pdf>]) [135]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/spe
ckley.tex [136]
Chapter 9.
[137]) [138 </<<PKGBUILDDIR>>/debian/tmp3/posix/
doc/user/figures/speckley3.png (PNG copy)> </<<BUILDDIR>>/python
-escript-5.5/debian/tmp3/posix/doc/user/figures/speckley6.png (PNG copy)> </bui
ld/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/
speckley9.png (PNG copy)>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wei
pa.tex
Chapter 10.
[139] [140] [141]) [142]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/tri
linos.tex
Chapter 11.
[143] [144] [145] [146] [147]
Underfull \hbox (badness 10000) in paragraph at lines 266--271


Overfull \hbox (0.87425pt too wide) in paragraph at lines 278--279
[]\OT1/pcr/m/n/10 "Elasticity-2D" and "Elasticity-3D"\OT1/ptm/m/n/10 : us-ing s
moothed ag-gre-ga-tion, Cheby-shev smoother and
[148] [149] [150]
Overfull \hbox (63.16116pt too wide) in paragraph at lines 454--455
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 

Overfull \hbox (3.76056pt too wide) in paragraph at lines 464--465
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][] 

Overfull \hbox (63.16116pt too wide) in paragraph at lines 466--467
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 
[151]) [152]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sym
bolic.tex
Chapter 12.

Underfull \vbox (badness 10000) has occurred while \output is active [153]
[154]

LaTeX Warning: `!h' float specifier changed to `!ht'.

[155] [156 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/user/figures/0RotAniso.png> </<<PKGBUILDDIR>>
/debian/tmp3/posix/doc/user/figures/0RotIso.png> </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/user/figures/MidRotAniso.png> </build/
python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Mid
RotIso.png> </<<PKGBUILDDIR>>/debian/tmp3/posix/
doc/user/figures/diffaniso.png>] [157]) [158]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sub
worlds.tex
Chapter 13.
[159]>] [160]
Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88
\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for
 the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th
e []
[42] [43pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.5}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.134 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/heatrefraction.png [161]) [162]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/app
endix.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/not
ation.tex
Appendix A.
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cha
nges.tex [163] [164]
Appendix B.
[165] [166]>] [167] [168] [169] [170]
Underfull \hbox (badness 10000) in paragraph at lines 137--142

[44] [45pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.6}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.199 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/heatrefractiontdp.png [171])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/com
pletedevs.tex [172]
Appendix C.
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/our
refs.tex [173] [174]
Appendix D.
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty> </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/heatrefractiontgdp.pn
g) [175])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/py3
.tex [176]> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookb
ook/figures/heatrefractiontcdp.png
Appendix E.
)) [177] [178]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.ind [179]> </<<BUILDDIR>>/python-escrip
t-5.5/debian/tmp3/posix/doc/cookbook/figures/heatrefractionhf.png [180] [181]) [182]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.bbl [183]) [184]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Tut
orialPDE.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/exe
cute.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esc
ript.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lin
earPDE.aux>])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/pyc
ad.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Mod
els.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
ley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/rip
ley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/spe
ckley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wei
pa.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/tri
linos.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sym
bolic.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sub
worlds.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/app
endix.aux))

Package rerunfilecheck Warning: File `user.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Warning: There were undefined references.

 )
(see the transcript file for additional information){/usr/share/texlive/texmf-d
ist/fonts/enc/dvips/base/8r.enc}</usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmbx10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmbx8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmex10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cmextra
/cmex8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi6.pfb></usr/sha
re/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi7.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi8.pfb></usr/share/texlive/tex
mf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pfb></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/
type1/public/amsfonts/cm/cmr5.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmr6.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm
/cmr8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pf
b></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></us
r/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share
/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy7.pfb></usr/share/texliv
e/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy8.pfb></usr/share/texlive/texmf
-dist/fonts/type1/public/amsfonts/cm/cmsy9.pfb></usr/share/texlive/texmf-dist/f
onts/type1/public/amsfonts/latxfont/lcircle1.pfb></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/latxfont/lcirclew.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/latxfont/line10.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/latxfont/linew10.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/symbols/msam7.pfb></usr/share/texlive/texmf-dis
t/fonts/type1/public/amsfonts/symbols/msbm10.pfb></usr/share/texlive/texmf-dist
/fonts/type1/urw/courier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/
urw/courier/ucrr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/u
crro8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb><
/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb></usr/share/texlive/texm
f-dist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/ty
pe1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/u
tmbi8a.pfb
Underfull \hbox (badness 10000) in paragraph at lines 202--209


Overfull \hbox (7.5533pt too wide) in paragraph at lines 210--216
[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion [][]3.3[][
]. To show sub-domains, we need to go back to []
[46></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb]></us
r/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb [47pdfTeX warning (ext4): destination with the same identifier (name{figur
e.4.7}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.291 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/heatrefractionflux.png></usr/share/texlive
/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
Output written on user.pdf (184 pages, 2642937 bytes).
Transcript written on user.log.
cd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esy
sdoc.cls
Document Class: esysdoc 
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))

Package geometry Warning: Over-specification in `h'-direction.
    `width' (478.00812pt) is ignored.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty)
(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)>]
Underfull \hbox (badness 10000) in paragraph at lines 294--299

[48pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.305 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/heatrefraction2flux.png
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r_defs.tex (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty
****************************************
* Local config file subfigure.cfg used *
****************************************
(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty)
\@input{elist.aux}

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/eli
st.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty
Package `listing', V1.2, <1999/05/25>
))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/ver
info.tex)
Writing index file user.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Tut
orialPDE.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/exe
cute.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esc
ript.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lin
earPDE.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/pyc
ad.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Mod
els.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
ley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/rip
ley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/spe
ckley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wei
pa.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/tri
linos.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sym
bolic.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sub
worlds.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/app
endix.aux)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cop
yrights.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd))
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/doc
guide.tex [2>])]
Chapter 5.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example07.tex) [3] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)
[4]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cur
rentdev.tex [49] [5]) [6]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.toc [7]
Underfull \hbox (badness 10000) in paragraph at lines 154--155


Underfull \hbox (badness 10000) in paragraph at lines 154--155

[50] [8] [9]) [10]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Tut
orialPDE.tex
Chapter 1.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fir
ststep.tex [11 [51 </<<PKGBUILDDIR>>/debian/tmp3/pos
ix/doc/user/figures/FirstStepDomain.pdf>]]

LaTeX Warning: Reference `Zienc,NumHand' on page 12 undefined on input line 148
.

[12] (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty
Underfull \hbox (badness 10000) in paragraph at lines 279--280


Underfull \hbox (badness 10000) in paragraph at lines 279--280

[52pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.280 
       </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/c
ookbook/figures/sourceline.png) [13 </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/F
irstStepMesh.pdf>]>] [53]) [54pdfTeX warning (ext4): destination wi
th the same identifier (name{figure.5.2}) has been already used, duplicate igno
red

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.122 \chapter
              {Seismic Wave Propagation} </<<BUILDDIR>>/python-e
script-5.5/debian/tmp3/posix/doc/cookbook/figures/ex07usamp.png (PNG copy)> </b
uild/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/fi
gures/ex07jsamp.png (PNG copy)> </<<BUILDDIR>>/python-escript-5.
5/debian/tmp3/posix/doc/cookbook/figures/ex07nsamp.png (PNG copy)>]
Chapter 6.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example08.tex
Underfull \hbox (badness 10000) in paragraph at lines 18--24

[55] [14]
Underfull \hbox (badness 10000) in paragraph at lines 139--145

[56pdfTeX warning (ext4): destination with the same identifier (name{table.6.1}
) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.156 #
        set initial values for first two time steps with source terms] [57]
[58pdfTeX warning (ext4): destination with the same identifier (name{figure.6.1
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.214 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex08pw50.png (PNG copy)> </build/python-escript-rg4Iy
W/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08pw350.png (PNG 
copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/c
ookbook/figures/ex08pw650.png (PNG copy)> </<<BUILDDIR>>/python-
escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08pw950.png (PNG copy)>] [15] [16 </<<BUILDDIR>>/python-escript-5
.5/debian/tmp3/posix/doc/user/figures/FirstStepResultMATPLOTLIB.pdf>]
Underfull \hbox (badness 10000) in paragraph at lines 218--223

[59pdfTeX warning (ext4): destination with the same identifier (name{figure.6.2
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.273 t=
        t+h; n=n+1 </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/cookbook/figures/source.png [17 </bui
ld/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/
FirstStepResult.pdf>])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dif
fusion.tex [18 </<<PKGBUILDDIR>>/debian/tmp3/pos
ix/doc/user/figures/DiffusionDomain.pdf>]>] [19] [60] [20] [61pdfTeX warning (ext4): destina
tion with the same identifier (name{figure.6.3}) has been already used, duplica
te ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.392 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex08babc.png [21]>] [62pdfTeX warning (ext4): destination 
with the same identifier (name{figure.6.4}) has been already used, duplicate ig
nored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.392 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex08sw060.png (PNG copy)> </build/python-escript-rg4I
yW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08sw320.png (PNG
 copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/
cookbook/figures/ex08sw660.png (PNG copy)> </<<BUILDDIR>>/python
-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08sw880.png (PNG copy)>] [22]
Underfull \hbox (badness 10000) in paragraph at lines 395--399

) [63pdfTeX warning (ext4): destination with the same identifier (name{figure.6
.5}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.125 \chapter
              {3D Seismic Wave Propagation} </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/gmsh-example08c.png (PNG c
opy)>])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wav
e.tex [64pdfTeX warning (ext4): destination with the same identifier (name{fig
ure.6.6}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.125 \chapter
              {3D Seismic Wave Propagation} </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08c2601.png (PNG copy)>]
Chapter 7.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example09.tex [23 </<<PKGBUILDDIR>>/debian/tmp3/posix/do
c/user/figures/DiffusionRes1.pdf> </<<BUILDDIR>>/python-escript-
5.5/debian/tmp3/posix/doc/user/figures/DiffusionRes16.pdf> </build/python-escri
pt-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/DiffusionRes32.
pdf> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/use
r/figures/DiffusionRes48.pdf>] [24 </<<BUILDDIR>>/python-escript
-5.5/debian/tmp3/posix/doc/user/figures/waveu.pdf, page is rotated 90 degrees>]

Underfull \hbox (badness 10000) in paragraph at lines 17--21

[65 [25 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/use
r/figures/wavea.pdf, page is rotated 90 degrees>]] [26] [66] [67] [68 </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/cookbook/figures/gmsh-example09m.png (PNG copy)> </build/python-escr
ipt-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/gmsh-examp
le09msh2d.png (PNG copy)> </<<PKGBUILDDIR>>/debi
an/tmp3/posix/doc/cookbook/figures/gmsh-example09msh3d.png (PNG copy)>] [27]
[69pdfTeX warning (ext4): destination with the same identifier (name{figure.7.1
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.186 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/gmsh-example09lc.png (PNG copy)>]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [28 </build/python-e
script-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Wave11.pdf>
 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fi
gures/Wave22.pdf> </<<PKGBUILDDIR>>/debian/tmp3/
posix/doc/user/figures/Wave28.pdf> </<<BUILDDIR>>/python-escript
-5.5/debian/tmp3/posix/doc/user/figures/Wave32.pdf> </build/python-escript-rg4I
yW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Wave36.pdf>]
Underfull \hbox (badness 10000) in paragraph at lines 202--209


Overfull \hbox (25.36078pt too wide) in paragraph at lines 222--223
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 
) [70] [71 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/cookbook/figures/ex09b00201.png (PNG copy)> </<<BUILDDIR>>/py
thon-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex09b00341.png (PNG cop
y)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cook
book/figures/ex09b00440.png (PNG copy)>] [72]
Chapter 8.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example10.tex)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/hea
tedblock.tex [29 [73 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/user/figures/WavePC.pdf, page is rotated 90 degrees>]] [30 [74]]
Underfull \hbox (badness 10000) in paragraph at lines 93--97

[75] [31 [76pdfTeX warning (ext4): destination with the same identifier (name{figur
e.8.1}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.177 \clearpage
                pdfTeX warning (ext4): destination with the same identifier (na
me{figure.8.2}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.177 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/mayavi2_openfile.png])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sto
kesflow.tex [32 </<<PKGBUILDDIR>>/debian/tmp3/po
six/doc/user/figures/HeatedBlock.pdf>] [33])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sli
p.tex [34> </<<BUILDDIR>>/p
ython-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/mayavi2_data.png] [35 </<<PKGBUILDDIR>>/debian/tmp3/pos
ix/doc/user/figures/stokes-fluid-t01.pdf> </<<BUILDDIR>>/python-
escript-5.5/debian/tmp3/posix/doc/user/figures/stokes-fluid-t10.pdf> </build/py
thon-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/stoke
s-fluid-t20.pdf> </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/user/figures/stokes-fluid-t30.pdf> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/user/figures/stokes-fluid-t40.pdf> </build/
python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/sto
kes-fluid-t50.pdf>]g++ -o debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_CopyNodalData.cpp
 [36 </<<PKGBUILDDIR>>/debian
/tmp3/posix/doc/user/figures/Slip1.pdf>] [37])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dir
ac.tex>]
[77pdfTeX warning (ext4): destination with the same identifier (name{figure.8.3
}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.177 \clearpage
                pdfTeX warning (ext4): destination with the same identifier (na
me{figure.8.4}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.177 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/mayavi2_cell2point.png [38 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/user/figures/Slip2.png> </<<BUILDDIR>>
/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10apot.png (PNG co
py)>]
Underfull \hbox (badness 10000) in paragraph at lines 180--184

[78] [79pdfTeX warning (ext4): destination with the same identifier (name{figur
e.8.5}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.246 \clearpage
                pdfTeX warning (ext4): destination with the same identifier (na
me{figure.8.6}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.246 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10bpot.png (PNG copy)> </build/python-escript-rg4Iy
W/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10bpot2.png (PNG 
copy)>] [80pdfTeX warning (ext4): destination with the same identifier (name{fi
gure.8.7}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.246 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10p_boundeff.pdf>]
Underfull \hbox (badness 10000) in paragraph at lines 275--281

[81] [82] [83pdfTeX warning (ext4): destination with the same identifier (name{
figure.8.8}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.406 \clearpage
                pdfTeX warning (ext4): destination with the same identifier (na
me{figure.8.9}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.406 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10m_geo.png (PNG copy)> </build/python-escript-rg4I
yW/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10m_msh.png (PNG
 copy)>] [84pdfTeX warning (ext4): destination with the same identifier (name{f
igure.8.10}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.449 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10q_boundeff.pdf>] [85pdfTeX warning (ext4): destin
ation with the same identifier (name{figure.8.11}) has been already used, dupli
cate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.449 \clearpage
                 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/cookbook/figures/ex10q_boundeff_zoom.pdf>]) [86]
Chapter 9.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/example11.tex>]
Underfull \hbox (badness 10000) in paragraph at lines 61--62


Underfull \hbox (badness 10000) in paragraph at lines 61--62

)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook.bbl [87] [88pdfTeX warning (ext4): destination with the same identifi
er (name{figure.9.1}) has been already used, duplicate ignored

\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.1 \begin{thebibliography}{5}
                               </<<PKGBUILDDIR>>
/debian/tmp3/posix/doc/cookbook/figures/ex11cstreamline.png (PNG copy)>])
[89]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
/cookbook.aux))) [39

Package rerunfilecheck Warning: File `cookbook.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Warning: There were multiply-defined labels.

 )
(see the transcript file for additional information)pdfTeX warning (dest): name
{Hfootnote.36} has been referenced but does not exist, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.35} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.34} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.33} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.32} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.31} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.30} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.29} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.28} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.27} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.26} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.25} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.24} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.23} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.22} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.21} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.20} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.19} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.18} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.17} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.16} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.15} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.14} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.13} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.12} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.11} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.10} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.9} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.8} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.7} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.6} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.5} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.4} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.3} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Hfootnote.2} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{H </<<BUILDDIR>>/python-escript-
5.5/debian/tmp3/posix/doc/user/figures/diracplot.pngfootnote.1} has been referenced but does not exist
, replaced by a fixed one

{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc}</usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb></usr/share/texlive/texmf-
dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/f
onts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-dist/fonts/ty
pe1/public/amsfonts/cm/cmmi6.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmmi8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr5.
pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr6.pfb></us
r/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/share/
texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-
dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share/texlive/texmf-dist/fo
nts/type1/public/amsfonts/cm/cmsy7.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmsy8.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/symbols/msam10.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/c
ourier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrr8a
.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb></usr/s
hare/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/texlive
/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb></usr/share/texlive/texmf-dist
/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/ur
w/times/utmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a
.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
Output written on cookbook.pdf (89 pages, 4391921 bytes).
Transcript written on cookbook.log.
Install file: "debian/tmp3/posix/doc/cookbook/cookbook.pdf" as "debian/stage3/release/doc/cookbook/cookbook.pdf"
g++ -o debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_LumpedSystem.cpp
>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/exe
cute.tex [40]
Chapter 2.
[41]g++ -o debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_NodeCoordinates.cpp
 [42]) [43] [44]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esc
ript.tex
Chapter 3.
[45]
Underfull \hbox (badness 1648) in paragraph at lines 79--79
[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac
es in []. An ar-row in-di-cates that a func-tion in the
[46 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/EscriptDiagram1.pdf>] [47] [48] [49 </<<BUILDDIR>>/pyth
on-escript-5.5/debian/tmp3/posix/doc/user/figures/EscriptDiagram2.pdf>]
[50] [51] [52] [53] [54]
Underfull \vbox (badness 1348) has occurred while \output is active [55]
[56] [57] [58] [59] [60] [61] [62] [63] [64]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) [65]
Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 
[66]
Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743
\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st
ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 
and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . 
[67] [68] [69] [70] [71] [72] [73]) [74]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lin
earPDE.tex
Chapter 4.
[75] [76]
Overfull \hbox (18.97215pt too wide) in paragraph at lines 180--182
\OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in-
di-cates that it is un-de-fined. For more de-tails on \OT1/pcr/m/n/10 SolverOpt
ions
[77] [78] [79] [80] [81]

LaTeX Warning: Reference `TAB FINLEY SOLVER OPTIONS 2' on page 82 undefined on 
input line 566.

[82] [83] [84] [85] [86]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lum
ping.tex [87] [88 </<<PKGBUILDDIR>>/debian/tmp3/
posix/doc/user/figures/lumping_valet_a_1.png>] [89 </build/python-escript-rg4Iy
W/python-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_valet_a_2.png> 
</<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fig
ures/lumping_valet_u_1.png>] [90 </<<BUILDDIR>>/python-escript-5
.5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_du_1.png> </build/python-esc
ript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_
du_2.png>])) [91 </<<PKGBUILDDIR>>/debian/tmp3/p
osix/doc/user/figures/lumping_SUPG_u_1.png> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_u_1b.png>]
[92 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/lumping_SUPG_u_2.png>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/pyc
ad.tex
Chapter 5.
[93] [94] [95 </<<PKGBUILDDIR>>/debian/tmp3/posi
x/doc/user/figures/quad.pdf>] [96 </<<BUILDDIR>>/python-escript-
5.5/debian/tmp3/posix/doc/user/figures/trapezoid.pdf>] [97 </build/python-escri
pt-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/brick.pdf>]
[98 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
/figures/refine.pdf>] [99] [100] [101] [102] [103] [104]) [105]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Mod
els.tex [106]
Chapter 6.

(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sto
kessolver.tex [107] [108] [109] [110] [111])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dar
cyflux.tex [112] [113] [114 </<<PKGBUILDDIR>>/de
bian/tmp3/posix/doc/user/figures/darcy_result.png (PNG copy)>]) [115] [116]
[117]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fau
ltsystem.tex [118 </<<PKGBUILDDIR>>/debian/tmp3/
posix/doc/user/figures/FaultSystem2D.pdf>] [119] [120] [121])) [122]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
ley.tex
Chapter 7.

LaTeX Warning: Reference `Zienc,NumHand' on page 123 undefined on input line 74
.

[123]
Underfull \vbox (badness 1226) has occurred while \output is active [124 </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/F
inleyMesh.pdf>] [125 </<<PKGBUILDDIR>>/debian/tm
p3/posix/doc/user/figures/FinleyContact.pdf>] [126]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
leyelements.tex) [127] [128]
Underfull \hbox (badness 1910) in paragraph at lines 383--383
[]\OT1/ptm/m/n/10 Table 7.2: Solvers avail-able for [] and the \OT1/pcr/m/n/10 
PASO [][]\OT1/ptm/m/n/10 pack-age and the rel-e-vant op-tions in

Underfull \vbox (badness 1337) has occurred while \output is active [129 </buil
d/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/F
inleyMacroLeg.pdf> </<<PKGBUILDDIR>>/debian/tmp3
/posix/doc/user/figures/FinleyMacroTri.pdf> </<<BUILDDIR>>/pytho
n-escript-5.5/debian/tmp3/posix/doc/user/figures/FinleyMacroRec.pdf>] [130])
[131]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/rip
ley.tex [132]
Chapter 8.
[133] [134 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/user/figures/RipleyMesh.pdf>]) [135]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/spe
ckley.tex [136]
Chapter 9.
[137]) [138 </<<PKGBUILDDIR>>/debian/tmp3/posix/
doc/user/figures/speckley3.png (PNG copy)> </<<BUILDDIR>>/python
-escript-5.5/debian/tmp3/posix/doc/user/figures/speckley6.png (PNG copy)> </bui
ld/python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/
speckley9.png (PNG copy)>]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wei
pa.tex
Chapter 10.
[139] [140] [141]) [142]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/tri
linos.tex
Chapter 11.
[143] [144] [145] [146] [147]
Underfull \hbox (badness 10000) in paragraph at lines 266--271


Overfull \hbox (0.87425pt too wide) in paragraph at lines 278--279
[]\OT1/pcr/m/n/10 "Elasticity-2D" and "Elasticity-3D"\OT1/ptm/m/n/10 : us-ing s
moothed ag-gre-ga-tion, Cheby-shev smoother and
[148] [149] [150]
Overfull \hbox (63.16116pt too wide) in paragraph at lines 454--455
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 

Overfull \hbox (3.76056pt too wide) in paragraph at lines 464--465
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][] 

Overfull \hbox (63.16116pt too wide) in paragraph at lines 466--467
[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] 
[151]) [152]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sym
bolic.tex
Chapter 12.

Underfull \vbox (badness 10000) has occurred while \output is active [153]
[154]

LaTeX Warning: `!h' float specifier changed to `!ht'.

[155] [156 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
oc/user/figures/0RotAniso.png> </<<PKGBUILDDIR>>
/debian/tmp3/posix/doc/user/figures/0RotIso.png> </<<BUILDDIR>>/
python-escript-5.5/debian/tmp3/posix/doc/user/figures/MidRotAniso.png> </build/
python-escript-rg4IyW/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Mid
RotIso.png> </<<PKGBUILDDIR>>/debian/tmp3/posix/
doc/user/figures/diffaniso.png>] [157]) [158]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sub
worlds.tex
Chapter 13.
[159] [160] [161]) [162]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/app
endix.tex
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/not
ation.tex
Appendix A.
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cha
nges.tex [163] [164]
Appendix B.
[165] [166] [167] [168] [169] [170] [171])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/com
pletedevs.tex [172]
Appendix C.
)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/our
refs.tex [173] [174]
Appendix D.
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty)
(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty) [175])
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/py3
.tex [176]
Appendix E.
)) [177] [178]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.ind [179] [180] [181]) [182]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.bbl [183]) [184]
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
r.aux
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Tut
orialPDE.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/exe
cute.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esc
ript.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lin
earPDE.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/pyc
ad.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Mod
els.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fin
ley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/rip
ley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/spe
ckley.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wei
pa.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/tri
linos.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sym
bolic.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sub
worlds.aux)
(/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/app
endix.aux))

Package rerunfilecheck Warning: File `user.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Warning: There were undefined references.

 )
(see the transcript file for additional information){/usr/share/texlive/texmf-d
ist/fonts/enc/dvips/base/8r.enc}</usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmbx10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmbx8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmex10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cmextra
/cmex8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi6.pfb></usr/sha
re/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi7.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi8.pfb></usr/share/texlive/tex
mf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pfb></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/
type1/public/amsfonts/cm/cmr5.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmr6.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm
/cmr8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pf
b></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></us
r/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share
/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy7.pfb></usr/share/texliv
e/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy8.pfb></usr/share/texlive/texmf
-dist/fonts/type1/public/amsfonts/cm/cmsy9.pfb></usr/share/texlive/texmf-dist/f
onts/type1/public/amsfonts/latxfont/lcircle1.pfb></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/latxfont/lcirclew.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/latxfont/line10.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/latxfont/linew10.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/symbols/msam7.pfb></usr/share/texlive/texmf-dis
t/fonts/type1/public/amsfonts/symbols/msbm10.pfb></usr/share/texlive/texmf-dist
/fonts/type1/urw/courier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/
urw/courier/ucrr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/u
crro8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb><
/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb></usr/share/texlive/texm
f-dist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/ty
pe1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/u
tmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb></us
r/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb></usr/share/texlive
/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
Output written on user.pdf (184 pages, 2642937 bytes).
Transcript written on user.log.
reached max number of retries on Latex , 4
Install file: "debian/tmp3/posix/doc/user/user.pdf" as "debian/stage3/release/doc/user/user.pdf"
g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_PDE.cpp
g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Points.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_PDE_Points.cpp
g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_PDE_Single_2D.cpp
g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Single_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_PDE_Single_3D.cpp
g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_PDE_System_2D.cpp
g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_PDE_System_3D.cpp
Install file: "paso/src/SystemMatrix.h" as "debian/stage3/include/paso/SystemMatrix.h"
Install file: "paso/src/SparseMatrix.h" as "debian/stage3/include/paso/SparseMatrix.h"
g++ -o debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_addToSystemMatrix.cpp
g++ -o debian/tmp3/posix/dudley/src/Assemble_getAssembleParameters.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_getAssembleParameters.cpp
g++ -o debian/tmp3/posix/dudley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_getNormal.cpp
g++ -o debian/tmp3/posix/dudley/src/Assemble_getSize.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_getSize.cpp
g++ -o debian/tmp3/posix/dudley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_integrate.cpp
g++ -o debian/tmp3/posix/dudley/src/Assemble_interpolate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_interpolate.cpp
Install file: "escriptcore/src/NCHelper.h" as "debian/stage3/include/escript/NCHelper.h"
Install file: "escriptcore/src/SubWorld.h" as "debian/stage3/include/escript/SubWorld.h"
Install file: "escriptcore/src/AbstractReducer.h" as "debian/stage3/include/escript/AbstractReducer.h"
g++ -o debian/tmp3/posix/dudley/src/DomainFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/DomainFactory.cpp
Install file: "dudley/src/Assemble.h" as "debian/stage3/include/dudley/Assemble.h"
Install file: "dudley/src/IndexList.h" as "debian/stage3/include/dudley/IndexList.h"
Install file: "escriptcore/src/DataFactory.h" as "debian/stage3/include/escript/DataFactory.h"
Install file: "escriptcore/src/Random.h" as "debian/stage3/include/escript/Random.h"
Install file: "escriptcore/src/SolverOptions.h" as "debian/stage3/include/escript/SolverOptions.h"
Install file: "paso/src/Transport.h" as "debian/stage3/include/paso/Transport.h"
Install file: "paso/src/Options.h" as "debian/stage3/include/paso/Options.h"
g++ -o debian/tmp3/posix/dudley/src/DudleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/DudleyDomain.cpp
g++ -o debian/tmp3/posix/dudley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/ElementFile.cpp
g++ -o debian/tmp3/posix/dudley/src/ElementFile_createColoring.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/ElementFile_createColoring.cpp
g++ -o debian/tmp3/posix/dudley/src/ElementFile_distributeByRankOfDOF.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/ElementFile_distributeByRankOfDOF.cpp
g++ -o debian/tmp3/posix/dudley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/ElementFile_jacobians.cpp
g++ -o debian/tmp3/posix/dudley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/IndexList.cpp
g++ -o debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_distributeByRankOfDOF.cpp
g++ -o debian/tmp3/posix/dudley/src/Mesh_getPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_getPattern.cpp
g++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_optimizeDOFDistribution.cpp
g++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_optimizeDOFLabeling.cpp
g++ -o debian/tmp3/posix/dudley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_read.cpp
g++ -o debian/tmp3/posix/dudley/src/Mesh_readGmsh.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_readGmsh.cpp
g++ -o debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_resolveNodeIds.cpp
g++ -o debian/tmp3/posix/dudley/src/Mesh_tet4.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_tet4.cpp
g++ -o debian/tmp3/posix/dudley/src/Mesh_tri3.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_tri3.cpp
g++ -o debian/tmp3/posix/dudley/src/Mesh_write.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_write.cpp
g++ -o debian/tmp3/posix/dudley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/NodeFile.cpp
g++ -o debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/NodeFile_createDenseLabelings.cpp
g++ -o debian/tmp3/posix/dudley/src/NodeFile_createMappings.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/NodeFile_createMappings.cpp
g++ -o debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/NodeFile_createTrilinosGraph.cpp
g++ -o debian/tmp3/posix/dudley/src/NodeFile_gather.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/NodeFile_gather.cpp
g++ -o debian/tmp3/posix/dudley/src/ShapeTable.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/ShapeTable.cpp
g++ -o debian/tmp3/posix/dudley/src/Util.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Util.cpp
g++ -o debian/tmp3/posix/dudley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_gradient.cpp
g++ -o debian/tmp3/posix/dudley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_jacobians.cpp
g++ -o debian/tmp3/posix/paso/src/BiCGStab.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/BiCGStab.cpp
g++ -o debian/tmp3/posix/paso/src/Coupler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Coupler.cpp
g++ -o debian/tmp3/posix/paso/src/FCT_Solver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/FCT_Solver.cpp
g++ -o debian/tmp3/posix/paso/src/FluxLimiter.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/FluxLimiter.cpp
g++ -o debian/tmp3/posix/paso/src/Functions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Functions.cpp
g++ -o debian/tmp3/posix/paso/src/GMRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/GMRES.cpp
g++ -o debian/tmp3/posix/paso/src/GMRES2.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/GMRES2.cpp
g++ -o debian/tmp3/posix/paso/src/MKL.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/MKL.cpp
g++ -o debian/tmp3/posix/paso/src/NewtonGMRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/NewtonGMRES.cpp
g++ -o debian/tmp3/posix/paso/src/Options.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Options.cpp
g++ -o debian/tmp3/posix/paso/src/PCG.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/PCG.cpp
g++ -o debian/tmp3/posix/paso/src/PasoUtil.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/PasoUtil.cpp
g++ -o debian/tmp3/posix/paso/src/Pattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Pattern.cpp
g++ -o debian/tmp3/posix/paso/src/Pattern_mis.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Pattern_mis.cpp
g++ -o debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Pattern_reduceBandwidth.cpp
g++ -o debian/tmp3/posix/paso/src/Preconditioner.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Preconditioner.cpp
g++ -o debian/tmp3/posix/paso/src/ReactiveSolver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/ReactiveSolver.cpp
g++ -o debian/tmp3/posix/paso/src/SchurComplement.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SchurComplement.cpp
g++ -o debian/tmp3/posix/paso/src/Smoother.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Smoother.cpp
g++ -o debian/tmp3/posix/paso/src/Solver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Solver.cpp
g++ -o debian/tmp3/posix/paso/src/Solver_Function.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Solver_Function.cpp
g++ -o debian/tmp3/posix/paso/src/SparseMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix.cpp
g++ -o debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix_getSubmatrix.cpp
g++ -o debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix_nullifyRowsAndCols.cpp
g++ -o debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix_saveHB.cpp
g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix_MatrixMatrix.cpp
g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix_MatrixMatrixTranspose.cpp
g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix_MatrixVector.cpp
g++ -o debian/tmp3/posix/paso/src/SystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix.cpp
g++ -o debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix_MatrixVector.cpp
g++ -o debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp
g++ -o debian/tmp3/posix/paso/src/SystemMatrix_debug.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix_debug.cpp
g++ -o debian/tmp3/posix/paso/src/SystemMatrix_extendedRows.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix_extendedRows.cpp
g++ -o debian/tmp3/posix/paso/src/SystemMatrix_loadMM.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix_loadMM.cpp
g++ -o debian/tmp3/posix/paso/src/SystemMatrix_mergeMainAndCouple.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix_mergeMainAndCouple.cpp
g++ -o debian/tmp3/posix/paso/src/SystemMatrixPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrixPattern.cpp
g++ -o debian/tmp3/posix/paso/src/SystemMatrixPattern_unrollBlocks.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrixPattern_unrollBlocks.cpp
g++ -o debian/tmp3/posix/paso/src/Transport.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Transport.cpp
g++ -o debian/tmp3/posix/paso/src/Transport_solve.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Transport_solve.cpp
g++ -o debian/tmp3/posix/paso/src/ILU.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/ILU.cpp
g++ -o debian/tmp3/posix/paso/src/MINRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/MINRES.cpp
g++ -o debian/tmp3/posix/paso/src/RILU.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/RILU.cpp
g++ -o debian/tmp3/posix/paso/src/TFQMR.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/TFQMR.cpp
g++ -o debian/tmp3/posix/paso/src/UMFPACK.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/UMFPACK.cpp
g++ -o debian/tmp3/posix/paso/src/mmio.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/mmio.cpp
g++ -o debian/tmp3/posix/paso/src/performance.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/performance.cpp
g++ -o debian/tmp3/posix/paso/src/solve.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/solve.cpp
g++ -o debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/AbstractContinuousDomain.cpp
g++ -o debian/tmp3/posix/escriptcore/src/AbstractDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/AbstractDomain.cpp
g++ -o debian/tmp3/posix/escriptcore/src/AbstractReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/AbstractReducer.cpp
g++ -o debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/AbstractSystemMatrix.cpp
g++ -o debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/AbstractTransportProblem.cpp
g++ -o debian/tmp3/posix/escriptcore/src/ArrayOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/ArrayOps.cpp
g++ -o debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/BinaryDataReadyOps.cpp
g++ -o debian/tmp3/posix/escriptcore/src/Data.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/Data.cpp
g++ -o debian/tmp3/posix/escriptcore/src/DataAbstract.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataAbstract.cpp
g++ -o debian/tmp3/posix/escriptcore/src/DataConstant.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataConstant.cpp
g++ -o debian/tmp3/posix/escriptcore/src/DataEmpty.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataEmpty.cpp
g++ -o debian/tmp3/posix/escriptcore/src/DataExpanded.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataExpanded.cpp
g++ -o debian/tmp3/posix/escriptcore/src/DataFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataFactory.cpp
g++ -o debian/tmp3/posix/escriptcore/src/DataLazy.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataLazy.cpp
In file included from escriptcore/src/Data.cpp:18:
escriptcore/src/Data.h: In member function 'escript::DataTypes::real_t escript::Data::reduction(BinaryFunction, escript::DataTypes::real_t) const [with BinaryFunction = escript::AbsMax<std::complex<double> >]':
escriptcore/src/Data.h:2223:1: note: parameter passing for argument of type 'escript::AbsMax<std::complex<double> >' changed in GCC 7.1
 2223 | Data::reduction(BinaryFunction operation, DataTypes::real_t initial_value) const
      | ^~~~
escriptcore/src/Data.h: In member function 'escript::DataTypes::real_t escript::Data::reduction(BinaryFunction, escript::DataTypes::real_t) const [with BinaryFunction = escript::AbsMax<double>]':
escriptcore/src/Data.h:2223:1: note: parameter passing for argument of type 'escript::AbsMax<double>' changed in GCC 7.1
escriptcore/src/Data.cpp: In member function 'escript::DataTypes::real_t escript::Data::LsupWorker() const':
escriptcore/src/Data.cpp:2514:31: note: parameter passing for argument of type 'escript::AbsMax<std::complex<double> >' changed in GCC 7.1
 2514 |         localValue = reduction(abs_max_func,0);
      |                      ~~~~~~~~~^~~~~~~~~~~~~~~~
escriptcore/src/Data.cpp:2528:31: note: parameter passing for argument of type 'escript::AbsMax<double>' changed in GCC 7.1
 2528 |         localValue = reduction(abs_max_func,0);
      |                      ~~~~~~~~~^~~~~~~~~~~~~~~~
g++ -o debian/tmp3/posix/escriptcore/src/DataReady.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataReady.cpp
g++ -o debian/tmp3/posix/escriptcore/src/DataTagged.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataTagged.cpp
g++ -o debian/tmp3/posix/escriptcore/src/DataTypes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataTypes.cpp
g++ -o debian/tmp3/posix/escriptcore/src/DataVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataVector.cpp
g++ -o debian/tmp3/posix/escriptcore/src/DataVectorAlt.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataVectorAlt.cpp
g++ -o debian/tmp3/posix/escriptcore/src/DataVectorOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataVectorOps.cpp
g++ -o debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataVectorTaipan.cpp
g++ -o debian/tmp3/posix/escriptcore/src/EscriptParams.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/EscriptParams.cpp
g++ -o debian/tmp3/posix/escriptcore/src/EsysMPI.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/EsysMPI.cpp
g++ -o debian/tmp3/posix/escriptcore/src/ES_optype.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/ES_optype.cpp
g++ -o debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/ExceptionTranslators.cpp
g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpace.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/FunctionSpace.cpp
g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/FunctionSpaceFactory.cpp
g++ -o debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/LapackInverseHelper.cpp
g++ -o debian/tmp3/posix/escriptcore/src/MPIDataReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/MPIDataReducer.cpp
g++ -o debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/MPIScalarReducer.cpp
g++ -o debian/tmp3/posix/escriptcore/src/NCHelper.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/NCHelper.cpp
g++ -o debian/tmp3/posix/escriptcore/src/NonReducedVariable.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/NonReducedVariable.cpp
g++ -o debian/tmp3/posix/escriptcore/src/NullDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/NullDomain.cpp
g++ -o debian/tmp3/posix/escriptcore/src/pyerr.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/pyerr.cpp
g++ -o debian/tmp3/posix/escriptcore/src/Random.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/Random.cpp
g++ -o debian/tmp3/posix/escriptcore/src/SolverOptions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/SolverOptions.cpp
g++ -o debian/tmp3/posix/escriptcore/src/SplitWorld.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/SplitWorld.cpp
g++ -o debian/tmp3/posix/escriptcore/src/SubWorld.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/SubWorld.cpp
g++ -o debian/tmp3/posix/escriptcore/src/Taipan.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/Taipan.cpp
g++ -o debian/tmp3/posix/escriptcore/src/TestDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/TestDomain.cpp
g++ -o debian/tmp3/posix/escriptcore/src/Utils.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/Utils.cpp
g++ -o debian/tmp3/posix/escriptcore/src/WrappedArray.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/WrappedArray.cpp
/usr/bin/python3 scripts/py_comp.py dudley/py_src/factorywrappers.py debian/tmp3/posix/dudley/py/factorywrappers.pyc
Install file: "debian/tmp3/posix/dudley/py/factorywrappers.pyc" as "debian/stage3/esys/dudley/factorywrappers.pyc"
/usr/bin/python3 scripts/py_comp.py dudley/py_src/readers.py debian/tmp3/posix/dudley/py/readers.pyc
Install file: "debian/tmp3/posix/dudley/py/readers.pyc" as "debian/stage3/esys/dudley/readers.pyc"
/usr/bin/python3 scripts/py_comp.py escript/py_src/__init__.py debian/tmp3/posix/escript/__init__.pyc
Install file: "debian/tmp3/posix/escript/__init__.pyc" as "debian/stage3/esys/escript/__init__.pyc"
/usr/bin/python3 scripts/py_comp.py escript/py_src/datamanager.py debian/tmp3/posix/escript/datamanager.pyc
Install file: "debian/tmp3/posix/escript/datamanager.pyc" as "debian/stage3/esys/escript/datamanager.pyc"
/usr/bin/python3 scripts/py_comp.py escript/py_src/linearPDEs.py debian/tmp3/posix/escript/linearPDEs.pyc
Install file: "debian/tmp3/posix/escript/linearPDEs.pyc" as "debian/stage3/esys/escript/linearPDEs.pyc"
/usr/bin/python3 scripts/py_comp.py escript/py_src/modelframe.py debian/tmp3/posix/escript/modelframe.pyc
Install file: "debian/tmp3/posix/escript/modelframe.pyc" as "debian/stage3/esys/escript/modelframe.pyc"
/usr/bin/python3 scripts/py_comp.py escript/py_src/models.py debian/tmp3/posix/escript/models.pyc
Install file: "debian/tmp3/posix/escript/models.pyc" as "debian/stage3/esys/escript/models.pyc"
/usr/bin/python3 scripts/py_comp.py escript/py_src/pdetools.py debian/tmp3/posix/escript/pdetools.pyc
Install file: "debian/tmp3/posix/escript/pdetools.pyc" as "debian/stage3/esys/escript/pdetools.pyc"
/usr/bin/python3 scripts/py_comp.py escript/py_src/splitworld.py debian/tmp3/posix/escript/splitworld.pyc
Install file: "debian/tmp3/posix/escript/splitworld.pyc" as "debian/stage3/esys/escript/splitworld.pyc"
/usr/bin/python3 scripts/py_comp.py escript/py_src/symbolic.py debian/tmp3/posix/escript/symbolic.pyc
Install file: "debian/tmp3/posix/escript/symbolic.pyc" as "debian/stage3/esys/escript/symbolic.pyc"
/usr/bin/python3 scripts/py_comp.py escript/py_src/unitsSI.py debian/tmp3/posix/escript/unitsSI.pyc
Install file: "debian/tmp3/posix/escript/unitsSI.pyc" as "debian/stage3/esys/escript/unitsSI.pyc"
/usr/bin/python3 scripts/py_comp.py escript/py_src/util.py debian/tmp3/posix/escript/util.pyc
Install file: "debian/tmp3/posix/escript/util.pyc" as "debian/stage3/esys/escript/util.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/__init__.py debian/tmp3/posix/escriptcore/py/__init__.pyc
Install file: "debian/tmp3/posix/escriptcore/py/__init__.pyc" as "debian/stage3/esys/escriptcore/__init__.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/benchmark.py debian/tmp3/posix/escriptcore/py/benchmark.pyc
Install file: "debian/tmp3/posix/escriptcore/py/benchmark.pyc" as "debian/stage3/esys/escriptcore/benchmark.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/datamanager.py debian/tmp3/posix/escriptcore/py/datamanager.pyc
Install file: "debian/tmp3/posix/escriptcore/py/datamanager.pyc" as "debian/stage3/esys/escriptcore/datamanager.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/domainCouplers.py debian/tmp3/posix/escriptcore/py/domainCouplers.pyc
g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/escriptcpp.cpp
Install file: "debian/tmp3/posix/escriptcore/py/domainCouplers.pyc" as "debian/stage3/esys/escriptcore/domainCouplers.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/faultsystems.py debian/tmp3/posix/escriptcore/py/faultsystems.pyc
Install file: "debian/tmp3/posix/escriptcore/py/faultsystems.pyc" as "debian/stage3/esys/escriptcore/faultsystems.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/flows.py debian/tmp3/posix/escriptcore/py/flows.pyc
Install file: "debian/tmp3/posix/escriptcore/py/flows.pyc" as "debian/stage3/esys/escriptcore/flows.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/gmshrunner.py debian/tmp3/posix/escriptcore/py/gmshrunner.pyc
Install file: "debian/tmp3/posix/escriptcore/py/gmshrunner.pyc" as "debian/stage3/esys/escriptcore/gmshrunner.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/heat.py debian/tmp3/posix/escriptcore/py/heat.pyc
Install file: "debian/tmp3/posix/escriptcore/py/heat.pyc" as "debian/stage3/esys/escriptcore/heat.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/levelset.py debian/tmp3/posix/escriptcore/py/levelset.pyc
Install file: "debian/tmp3/posix/escriptcore/py/levelset.pyc" as "debian/stage3/esys/escriptcore/levelset.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/linearPDEs.py debian/tmp3/posix/escriptcore/py/linearPDEs.pyc
Install file: "debian/tmp3/posix/escriptcore/py/linearPDEs.pyc" as "debian/stage3/esys/escriptcore/linearPDEs.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/modelframe.py debian/tmp3/posix/escriptcore/py/modelframe.pyc
Install file: "debian/tmp3/posix/escriptcore/py/modelframe.pyc" as "debian/stage3/esys/escriptcore/modelframe.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/models.py debian/tmp3/posix/escriptcore/py/models.pyc
Install file: "debian/tmp3/posix/escriptcore/py/models.pyc" as "debian/stage3/esys/escriptcore/models.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/mountains.py debian/tmp3/posix/escriptcore/py/mountains.pyc
Install file: "debian/tmp3/posix/escriptcore/py/mountains.pyc" as "debian/stage3/esys/escriptcore/mountains.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/nonlinearPDE.py debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc
Install file: "debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc" as "debian/stage3/esys/escriptcore/nonlinearPDE.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/pdetools.py debian/tmp3/posix/escriptcore/py/pdetools.pyc
Install file: "debian/tmp3/posix/escriptcore/py/pdetools.pyc" as "debian/stage3/esys/escriptcore/pdetools.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/rheologies.py debian/tmp3/posix/escriptcore/py/rheologies.pyc
Install file: "debian/tmp3/posix/escriptcore/py/rheologies.pyc" as "debian/stage3/esys/escriptcore/rheologies.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/runmodel.py debian/tmp3/posix/escriptcore/py/runmodel.pyc
Install file: "debian/tmp3/posix/escriptcore/py/runmodel.pyc" as "debian/stage3/esys/escriptcore/runmodel.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/splitworld.py debian/tmp3/posix/escriptcore/py/splitworld.pyc
Install file: "debian/tmp3/posix/escriptcore/py/splitworld.pyc" as "debian/stage3/esys/escriptcore/splitworld.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/start.py debian/tmp3/posix/escriptcore/py/start.pyc
Install file: "debian/tmp3/posix/escriptcore/py/start.pyc" as "debian/stage3/esys/escriptcore/start.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/__init__.py debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc
Install file: "debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc" as "debian/stage3/esys/escriptcore/symbolic/__init__.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/evaluator.py debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc
Install file: "debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc" as "debian/stage3/esys/escriptcore/symbolic/evaluator.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/functions.py debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc
Install file: "debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc" as "debian/stage3/esys/escriptcore/symbolic/functions.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/pretty.py debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc
Install file: "debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc" as "debian/stage3/esys/escriptcore/symbolic/pretty.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/symbol.py debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc
Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc" as "debian/stage3/esys/escriptcore/symbolic/symbol.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/symconstants.py debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc
Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc" as "debian/stage3/esys/escriptcore/symbolic/symconstants.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/utils.py debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc
Install file: "debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc" as "debian/stage3/esys/escriptcore/symbolic/utils.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/testing.py debian/tmp3/posix/escriptcore/py/testing.pyc
Install file: "debian/tmp3/posix/escriptcore/py/testing.pyc" as "debian/stage3/esys/escriptcore/testing.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/unitsSI.py debian/tmp3/posix/escriptcore/py/unitsSI.pyc
Install file: "debian/tmp3/posix/escriptcore/py/unitsSI.pyc" as "debian/stage3/esys/escriptcore/unitsSI.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/utestselect.py debian/tmp3/posix/escriptcore/py/utestselect.pyc
Install file: "debian/tmp3/posix/escriptcore/py/utestselect.pyc" as "debian/stage3/esys/escriptcore/utestselect.pyc"
/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/util.py debian/tmp3/posix/escriptcore/py/util.pyc
Install file: "debian/tmp3/posix/escriptcore/py/util.pyc" as "debian/stage3/esys/escriptcore/util.pyc"
/usr/bin/python3 scripts/py_comp.py finley/py_src/__init__.py debian/tmp3/posix/finley/py/__init__.pyc
Install file: "debian/tmp3/posix/finley/py/__init__.pyc" as "debian/stage3/esys/finley/__init__.pyc"
/usr/bin/python3 scripts/py_comp.py finley/py_src/factorywrappers.py debian/tmp3/posix/finley/py/factorywrappers.pyc
Install file: "debian/tmp3/posix/finley/py/factorywrappers.pyc" as "debian/stage3/esys/finley/factorywrappers.pyc"
Install file: "finley/src/DomainFactory.h" as "debian/stage3/include/finley/DomainFactory.h"
Install file: "finley/src/Finley.h" as "debian/stage3/include/finley/Finley.h"
Install file: "finley/src/FinleyDomain.h" as "debian/stage3/include/finley/FinleyDomain.h"
Install file: "finley/src/FinleyException.h" as "debian/stage3/include/finley/FinleyException.h"
Install file: "finley/src/ElementFile.h" as "debian/stage3/include/finley/ElementFile.h"
Install file: "finley/src/NodeFile.h" as "debian/stage3/include/finley/NodeFile.h"
Install file: "finley/src/Util.h" as "debian/stage3/include/finley/Util.h"
Install file: "finley/src/ReferenceElementSets.h" as "debian/stage3/include/finley/ReferenceElementSets.h"
Install file: "finley/src/NodeMapping.h" as "debian/stage3/include/finley/NodeMapping.h"
Install file: "finley/src/ReferenceElements.h" as "debian/stage3/include/finley/ReferenceElements.h"
Install file: "finley/src/Quadrature.h" as "debian/stage3/include/finley/Quadrature.h"
Install file: "finley/src/ShapeFunctions.h" as "debian/stage3/include/finley/ShapeFunctions.h"
g++ -o debian/tmp3/posix/finley/src/finleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/finleycpp.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_AverageElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_AverageElementData.cpp
g++ -o debian/tmp3/posix/escriptcore/src/libescript.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os debian/tmp3/posix/escriptcore/src/AbstractDomain.os debian/tmp3/posix/escriptcore/src/AbstractReducer.os debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os debian/tmp3/posix/escriptcore/src/ArrayOps.os debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os debian/tmp3/posix/escriptcore/src/Data.os debian/tmp3/posix/escriptcore/src/DataAbstract.os debian/tmp3/posix/escriptcore/src/DataConstant.os debian/tmp3/posix/escriptcore/src/DataEmpty.os debian/tmp3/posix/escriptcore/src/DataExpanded.os debian/tmp3/posix/escriptcore/src/DataFactory.os debian/tmp3/posix/escriptcore/src/DataLazy.os debian/tmp3/posix/escriptcore/src/DataReady.os debian/tmp3/posix/escriptcore/src/DataTagged.os debian/tmp3/posix/escriptcore/src/DataTypes.os debian/tmp3/posix/escriptcore/src/DataVector.os debian/tmp3/posix/escriptcore/src/DataVectorAlt.os debian/tmp3/posix/escriptcore/src/DataVectorOps.os debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os debian/tmp3/posix/escriptcore/src/EscriptParams.os debian/tmp3/posix/escriptcore/src/EsysMPI.os debian/tmp3/posix/escriptcore/src/ES_optype.os debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os debian/tmp3/posix/escriptcore/src/FunctionSpace.os debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os debian/tmp3/posix/escriptcore/src/MPIDataReducer.os debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os debian/tmp3/posix/escriptcore/src/NCHelper.os debian/tmp3/posix/escriptcore/src/NonReducedVariable.os debian/tmp3/posix/escriptcore/src/NullDomain.os debian/tmp3/posix/escriptcore/src/pyerr.os debian/tmp3/posix/escriptcore/src/Random.os debian/tmp3/posix/escriptcore/src/SolverOptions.os debian/tmp3/posix/escriptcore/src/SplitWorld.os debian/tmp3/posix/escriptcore/src/SubWorld.os debian/tmp3/posix/escriptcore/src/Taipan.os debian/tmp3/posix/escriptcore/src/TestDomain.os debian/tmp3/posix/escriptcore/src/Utils.os debian/tmp3/posix/escriptcore/src/WrappedArray.os -Ldebian/stage3/lib -L/usr/lib/python3.7/config-3.7m-arm-linux-gnueabihf -L/usr/lib -lnetcdf_c++4 -lpython3.7m -lboost_python38
Install file: "debian/tmp3/posix/escriptcore/src/libescript.so" as "debian/stage3/lib/libescript.so"
g++ -o debian/tmp3/posix/paso/src/libpaso.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/paso/src/BiCGStab.os debian/tmp3/posix/paso/src/Coupler.os debian/tmp3/posix/paso/src/FCT_Solver.os debian/tmp3/posix/paso/src/FluxLimiter.os debian/tmp3/posix/paso/src/Functions.os debian/tmp3/posix/paso/src/GMRES.os debian/tmp3/posix/paso/src/GMRES2.os debian/tmp3/posix/paso/src/MKL.os debian/tmp3/posix/paso/src/NewtonGMRES.os debian/tmp3/posix/paso/src/Options.os debian/tmp3/posix/paso/src/PCG.os debian/tmp3/posix/paso/src/PasoUtil.os debian/tmp3/posix/paso/src/Pattern.os debian/tmp3/posix/paso/src/Pattern_mis.os debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os debian/tmp3/posix/paso/src/Preconditioner.os debian/tmp3/posix/paso/src/ReactiveSolver.os debian/tmp3/posix/paso/src/SchurComplement.os debian/tmp3/posix/paso/src/Smoother.os debian/tmp3/posix/paso/src/Solver.os debian/tmp3/posix/paso/src/Solver_Function.os debian/tmp3/posix/paso/src/SparseMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix.os debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os debian/tmp3/posix/paso/src/SystemMatrix_debug.os debian/tmp3/posix/paso/src/SystemMatrix_extendedRows.os debian/tmp3/posix/paso/src/SystemMatrix_loadMM.os debian/tmp3/posix/paso/src/SystemMatrix_mergeMainAndCouple.os debian/tmp3/posix/paso/src/SystemMatrixPattern.os debian/tmp3/posix/paso/src/SystemMatrixPattern_unrollBlocks.os debian/tmp3/posix/paso/src/Transport.os debian/tmp3/posix/paso/src/Transport_solve.os debian/tmp3/posix/paso/src/ILU.os debian/tmp3/posix/paso/src/MINRES.os debian/tmp3/posix/paso/src/RILU.os debian/tmp3/posix/paso/src/TFQMR.os debian/tmp3/posix/paso/src/UMFPACK.os debian/tmp3/posix/paso/src/mmio.os debian/tmp3/posix/paso/src/performance.os debian/tmp3/posix/paso/src/solve.os -Ldebian/stage3/lib -L/usr/lib/python3.7/config-3.7m-arm-linux-gnueabihf -L/usr/lib -lescript -lnetcdf_c++4 -lpython3.7m -lboost_python38
Install file: "debian/tmp3/posix/paso/src/libpaso.so" as "debian/stage3/lib/libpaso.so"
g++ -o debian/tmp3/posix/dudley/src/libdudley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/Assemble_AverageElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/dudley/src/Assemble_PDE.os debian/tmp3/posix/dudley/src/Assemble_PDE_Points.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/dudley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/dudley/src/Assemble_getNormal.os debian/tmp3/posix/dudley/src/Assemble_getSize.os debian/tmp3/posix/dudley/src/Assemble_integrate.os debian/tmp3/posix/dudley/src/Assemble_interpolate.os debian/tmp3/posix/dudley/src/DomainFactory.os debian/tmp3/posix/dudley/src/DudleyDomain.os debian/tmp3/posix/dudley/src/ElementFile.os debian/tmp3/posix/dudley/src/ElementFile_createColoring.os debian/tmp3/posix/dudley/src/ElementFile_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/ElementFile_jacobians.os debian/tmp3/posix/dudley/src/IndexList.os debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/Mesh_getPattern.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os debian/tmp3/posix/dudley/src/Mesh_read.os debian/tmp3/posix/dudley/src/Mesh_readGmsh.os debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os debian/tmp3/posix/dudley/src/Mesh_tet4.os debian/tmp3/posix/dudley/src/Mesh_tri3.os debian/tmp3/posix/dudley/src/Mesh_write.os debian/tmp3/posix/dudley/src/NodeFile.os debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os debian/tmp3/posix/dudley/src/NodeFile_createMappings.os debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os debian/tmp3/posix/dudley/src/NodeFile_gather.os debian/tmp3/posix/dudley/src/ShapeTable.os debian/tmp3/posix/dudley/src/Util.os debian/tmp3/posix/dudley/src/Assemble_gradient.os debian/tmp3/posix/dudley/src/Assemble_jacobians.os -Ldebian/stage3/lib -L/usr/lib/python3.7/config-3.7m-arm-linux-gnueabihf -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lpython3.7m -lboost_python38
Install file: "debian/tmp3/posix/dudley/src/libdudley.so" as "debian/stage3/lib/libdudley.so"
g++ -o debian/tmp3/posix/dudley/src/dudleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/dudleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.7/config-3.7m-arm-linux-gnueabihf -L/usr/lib -ldudley -lpaso -lescript -lnetcdf_c++4 -lpython3.7m -lboost_python38
Install file: "debian/tmp3/posix/dudley/src/dudleycpp.so" as "debian/stage3/esys/dudley/dudleycpp.so"
g++ -o debian/tmp3/posix/finley/src/Assemble_CopyElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_CopyElementData.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_CopyNodalData.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_LumpedSystem.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_NodeCoordinates.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Points.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_Points.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_Single_1D.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_Single_2D.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_Single_3D.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_Single_C.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_System_1D.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_System_2D.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_System_3D.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_System_C.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_addToSystemMatrix.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_getAssembleParameters.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_getNormal.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_getSize.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_getSize.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_gradient.cpp
Install file: "escriptcore/src/Utils.h" as "debian/stage3/include/escript/Utils.h"
g++ -o debian/tmp3/posix/finley/src/Assemble_interpolate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_interpolate.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_integrate.cpp
g++ -o debian/tmp3/posix/finley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_jacobians.cpp
g++ -o debian/tmp3/posix/finley/src/DomainFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/DomainFactory.cpp
g++ -o debian/tmp3/posix/finley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/ElementFile.cpp
In file included from /usr/include/c++/9/vector:72,
                 from debian/stage3/include/escript/DataTypes.h:28,
                 from debian/stage3/include/finley/Finley.h:28,
                 from debian/stage3/include/finley/FinleyDomain.h:58,
                 from debian/stage3/include/finley/DomainFactory.h:21,
                 from finley/src/DomainFactory.cpp:18:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
g++ -o debian/tmp3/posix/finley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/ElementFile_jacobians.cpp
In file included from /usr/include/c++/9/vector:67,
                 from debian/stage3/include/escript/DataTypes.h:28,
                 from debian/stage3/include/finley/Finley.h:28,
                 from debian/stage3/include/finley/FinleyDomain.h:58,
                 from debian/stage3/include/finley/DomainFactory.h:21,
                 from finley/src/DomainFactory.cpp:18:
/usr/include/c++/9/bits/stl_vector.h: In function 'escript::Domain_ptr finley::readMesh_driver(const boost::python::list&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
g++ -o debian/tmp3/posix/finley/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/FinleyDomain.cpp
/usr/include/c++/9/bits/stl_vector.h: In function 'escript::Domain_ptr finley::readGmsh_driver(const boost::python::list&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'escript::Domain_ptr finley::brick_driver(const boost::python::list&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'escript::Domain_ptr finley::rectangle_driver(const boost::python::list&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
g++ -o debian/tmp3/posix/finley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/IndexList.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_addPoints.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_addPoints.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_findMatchingFaces.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_getPasoPattern.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_getTrilinosGraph.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_glueFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_glueFaces.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_hex20.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_hex20.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_hex8.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_hex8.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_joinFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_joinFaces.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_merge.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_merge.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_optimizeDOFDistribution.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_optimizeDOFDistribution.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_read.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_readGmsh.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_readGmsh.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_rec4.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_rec4.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_rec8.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_rec8.cpp
g++ -o debian/tmp3/posix/finley/src/Mesh_write.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_write.cpp
g++ -o debian/tmp3/posix/finley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/NodeFile.cpp
g++ -o debian/tmp3/posix/finley/src/Quadrature.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Quadrature.cpp
g++ -o debian/tmp3/posix/finley/src/ReferenceElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/ReferenceElements.cpp
g++ -o debian/tmp3/posix/finley/src/ShapeFunctions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/ShapeFunctions.cpp
g++ -o debian/tmp3/posix/finley/src/Util.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Util.cpp
g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/escriptcpp.os -Ldebian/stage3/lib -L/usr/lib/python3.7/config-3.7m-arm-linux-gnueabihf -L/usr/lib -lescript -lpython3.7m -lboost_python38
Install file: "debian/tmp3/posix/escriptcore/src/escriptcpp.so" as "debian/stage3/esys/escriptcore/escriptcpp.so"
/usr/bin/python3 scripts/py_comp.py finley/py_src/readers.py debian/tmp3/posix/finley/py/readers.pyc
/usr/bin/python3 scripts/py_comp.py modellib/py_src/__init__.py debian/tmp3/posix/modellib/__init__.pyc
Install file: "debian/tmp3/posix/finley/py/readers.pyc" as "debian/stage3/esys/finley/readers.pyc"
Install file: "debian/tmp3/posix/modellib/__init__.pyc" as "debian/stage3/esys/modellib/__init__.pyc"
/usr/bin/python3 scripts/py_comp.py modellib/py_src/flow.py debian/tmp3/posix/modellib/flow.pyc
/usr/bin/python3 scripts/py_comp.py modellib/py_src/geometry.py debian/tmp3/posix/modellib/geometry.pyc
Install file: "debian/tmp3/posix/modellib/flow.pyc" as "debian/stage3/esys/modellib/flow.pyc"
/usr/bin/python3 scripts/py_comp.py modellib/py_src/input.py debian/tmp3/posix/modellib/input.pyc
Install file: "debian/tmp3/posix/modellib/geometry.pyc" as "debian/stage3/esys/modellib/geometry.pyc"
/usr/bin/python3 scripts/py_comp.py modellib/py_src/materials.py debian/tmp3/posix/modellib/materials.pyc
Install file: "debian/tmp3/posix/modellib/input.pyc" as "debian/stage3/esys/modellib/input.pyc"
Install file: "debian/tmp3/posix/modellib/materials.pyc" as "debian/stage3/esys/modellib/materials.pyc"
/usr/bin/python3 scripts/py_comp.py modellib/py_src/mechanics.py debian/tmp3/posix/modellib/mechanics.pyc
/usr/bin/python3 scripts/py_comp.py modellib/py_src/probe.py debian/tmp3/posix/modellib/probe.pyc
Install file: "debian/tmp3/posix/modellib/mechanics.pyc" as "debian/stage3/esys/modellib/mechanics.pyc"
/usr/bin/python3 scripts/py_comp.py modellib/py_src/temperature.py debian/tmp3/posix/modellib/temperature.pyc
Install file: "debian/tmp3/posix/modellib/probe.pyc" as "debian/stage3/esys/modellib/probe.pyc"
/usr/bin/python3 scripts/py_comp.py modellib/py_src/visualization.py debian/tmp3/posix/modellib/visualization.pyc
Install file: "debian/tmp3/posix/modellib/temperature.pyc" as "debian/stage3/esys/modellib/temperature.pyc"
/usr/bin/python3 scripts/py_comp.py pycad/py_src/Triangle.py debian/tmp3/posix/pycad/Triangle.pyc
Install file: "debian/tmp3/posix/modellib/visualization.pyc" as "debian/stage3/esys/modellib/visualization.pyc"
/usr/bin/python3 scripts/py_comp.py pycad/py_src/__init__.py debian/tmp3/posix/pycad/__init__.pyc
Install file: "debian/tmp3/posix/pycad/Triangle.pyc" as "debian/stage3/esys/pycad/Triangle.pyc"
/usr/bin/python3 scripts/py_comp.py pycad/py_src/design.py debian/tmp3/posix/pycad/design.pyc
Install file: "debian/tmp3/posix/pycad/__init__.pyc" as "debian/stage3/esys/pycad/__init__.pyc"
/usr/bin/python3 scripts/py_comp.py pycad/py_src/extras.py debian/tmp3/posix/pycad/extras.pyc
Install file: "debian/tmp3/posix/pycad/design.pyc" as "debian/stage3/esys/pycad/design.pyc"
/usr/bin/python3 scripts/py_comp.py pycad/py_src/gmsh.py debian/tmp3/posix/pycad/gmsh.pyc
Install file: "debian/tmp3/posix/pycad/extras.pyc" as "debian/stage3/esys/pycad/extras.pyc"
/usr/bin/python3 scripts/py_comp.py pycad/py_src/primitives.py debian/tmp3/posix/pycad/primitives.pyc
Install file: "debian/tmp3/posix/pycad/gmsh.pyc" as "debian/stage3/esys/pycad/gmsh.pyc"
/usr/bin/python3 scripts/py_comp.py pycad/py_src/shapes.py debian/tmp3/posix/pycad/shapes.pyc
Install file: "debian/tmp3/posix/pycad/primitives.pyc" as "debian/stage3/esys/pycad/primitives.pyc"
/usr/bin/python3 scripts/py_comp.py pycad/py_src/transformations.py debian/tmp3/posix/pycad/transformations.pyc
Install file: "debian/tmp3/posix/pycad/shapes.pyc" as "debian/stage3/esys/pycad/shapes.pyc"
/usr/bin/python3 scripts/py_comp.py ripley/py_src/MultiResolutionDomain.py debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc
Install file: "debian/tmp3/posix/pycad/transformations.pyc" as "debian/stage3/esys/pycad/transformations.pyc"
/usr/bin/python3 scripts/py_comp.py ripley/py_src/__init__.py debian/tmp3/posix/ripley/py/__init__.pyc
Install file: "debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc" as "debian/stage3/esys/ripley/MultiResolutionDomain.pyc"
Install file: "ripley/src/AbstractAssembler.h" as "debian/stage3/include/ripley/AbstractAssembler.h"
Install file: "debian/tmp3/posix/ripley/py/__init__.pyc" as "debian/stage3/esys/ripley/__init__.pyc"
Install file: "ripley/src/Brick.h" as "debian/stage3/include/ripley/Brick.h"
Install file: "ripley/src/MultiBrick.h" as "debian/stage3/include/ripley/MultiBrick.h"
Install file: "ripley/src/MultiRectangle.h" as "debian/stage3/include/ripley/MultiRectangle.h"
Install file: "ripley/src/Rectangle.h" as "debian/stage3/include/ripley/Rectangle.h"
Install file: "ripley/src/domainhelpers.h" as "debian/stage3/include/ripley/domainhelpers.h"
Install file: "ripley/src/RipleyDomain.h" as "debian/stage3/include/ripley/RipleyDomain.h"
Install file: "ripley/src/Ripley.h" as "debian/stage3/include/ripley/Ripley.h"
Install file: "ripley/src/RipleyException.h" as "debian/stage3/include/ripley/RipleyException.h"
Install file: "ripley/src/system_dep.h" as "debian/stage3/include/ripley/system_dep.h"
g++ -o debian/tmp3/posix/ripley/src/blocktools.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/blocktools.cpp
g++ -o debian/tmp3/posix/ripley/src/ripleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/ripleycpp.cpp
g++ -o debian/tmp3/posix/ripley/src/blocktools2.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/blocktools2.cpp
Install file: "escriptcore/src/FileWriter.h" as "debian/stage3/include/escript/FileWriter.h"
Install file: "ripley/src/DefaultAssembler3D.h" as "debian/stage3/include/ripley/DefaultAssembler3D.h"
Install file: "ripley/src/LameAssembler3D.h" as "debian/stage3/include/ripley/LameAssembler3D.h"
Install file: "ripley/src/WaveAssembler3D.h" as "debian/stage3/include/ripley/WaveAssembler3D.h"
Install file: "ripley/src/blocktools.h" as "debian/stage3/include/ripley/blocktools.h"
g++ -o debian/tmp3/posix/ripley/src/Brick.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/Brick.cpp
Install file: "ripley/src/DefaultAssembler2D.h" as "debian/stage3/include/ripley/DefaultAssembler2D.h"
g++ -o debian/tmp3/posix/ripley/src/DefaultAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/DefaultAssembler2D.cpp
g++ -o debian/tmp3/posix/finley/src/libfinley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/Assemble_AverageElementData.os debian/tmp3/posix/finley/src/Assemble_CopyElementData.os debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/finley/src/Assemble_PDE.os debian/tmp3/posix/finley/src/Assemble_PDE_Points.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/finley/src/Assemble_getNormal.os debian/tmp3/posix/finley/src/Assemble_getSize.os debian/tmp3/posix/finley/src/Assemble_gradient.os debian/tmp3/posix/finley/src/Assemble_integrate.os debian/tmp3/posix/finley/src/Assemble_interpolate.os debian/tmp3/posix/finley/src/Assemble_jacobians.os debian/tmp3/posix/finley/src/DomainFactory.os debian/tmp3/posix/finley/src/ElementFile.os debian/tmp3/posix/finley/src/ElementFile_jacobians.os debian/tmp3/posix/finley/src/FinleyDomain.os debian/tmp3/posix/finley/src/IndexList.os debian/tmp3/posix/finley/src/Mesh_addPoints.os debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os debian/tmp3/posix/finley/src/Mesh_glueFaces.os debian/tmp3/posix/finley/src/Mesh_hex20.os debian/tmp3/posix/finley/src/Mesh_hex8.os debian/tmp3/posix/finley/src/Mesh_joinFaces.os debian/tmp3/posix/finley/src/Mesh_merge.os debian/tmp3/posix/finley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/finley/src/Mesh_read.os debian/tmp3/posix/finley/src/Mesh_readGmsh.os debian/tmp3/posix/finley/src/Mesh_rec4.os debian/tmp3/posix/finley/src/Mesh_rec8.os debian/tmp3/posix/finley/src/Mesh_write.os debian/tmp3/posix/finley/src/NodeFile.os debian/tmp3/posix/finley/src/Quadrature.os debian/tmp3/posix/finley/src/ReferenceElements.os debian/tmp3/posix/finley/src/ShapeFunctions.os debian/tmp3/posix/finley/src/Util.os -Ldebian/stage3/lib -L/usr/lib/python3.7/config-3.7m-arm-linux-gnueabihf -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lpython3.7m -lboost_python38
Install file: "debian/tmp3/posix/finley/src/libfinley.so" as "debian/stage3/lib/libfinley.so"
g++ -o debian/tmp3/posix/finley/src/finleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/finleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.7/config-3.7m-arm-linux-gnueabihf -L/usr/lib -lfinley -lpaso -lescript -lnetcdf_c++4 -lpython3.7m -lboost_python38
Install file: "debian/tmp3/posix/finley/src/finleycpp.so" as "debian/stage3/esys/finley/finleycpp.so"
g++ -o debian/tmp3/posix/ripley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/DefaultAssembler3D.cpp
In file included from /usr/include/c++/9/vector:72,
                 from debian/stage3/include/escript/DataTypes.h:28,
                 from debian/stage3/include/escript/AbstractDomain.h:23,
                 from debian/stage3/include/escript/FunctionSpace.h:24,
                 from debian/stage3/include/escript/AbstractSystemMatrix.h:22,
                 from debian/stage3/include/ripley/AbstractAssembler.h:21,
                 from ripley/src/ripleycpp.cpp:18:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from debian/stage3/include/escript/DataTypes.h:28,
                 from debian/stage3/include/escript/AbstractDomain.h:23,
                 from debian/stage3/include/escript/FunctionSpace.h:24,
                 from debian/stage3/include/escript/AbstractSystemMatrix.h:22,
                 from debian/stage3/include/ripley/AbstractAssembler.h:21,
                 from ripley/src/ripleycpp.cpp:18:
/usr/include/c++/9/bits/stl_vector.h: In function 'escript::Domain_ptr ripley::_multibrick(double, double, double, const boost::python::api::object&, const boost::python::api::object&, const boost::python::api::object&, int, int, int, const boost::python::api::object&, const boost::python::api::object&, escript::SubWorld_ptr, unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'escript::Domain_ptr ripley::_rectangle(double, double, const boost::python::api::object&, const boost::python::api::object&, int, int, const boost::python::api::object&, const boost::python::api::object&, escript::SubWorld_ptr)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'escript::Domain_ptr ripley::_multirectangle(double, double, const boost::python::api::object&, const boost::python::api::object&, int, int, const boost::python::api::object&, const boost::python::api::object&, escript::SubWorld_ptr, unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'escript::Domain_ptr ripley::_brick(double, double, double, const boost::python::api::object&, const boost::python::api::object&, const boost::python::api::object&, int, int, int, const boost::python::api::object&, const boost::python::api::object&, escript::SubWorld_ptr)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
g++ -o debian/tmp3/posix/ripley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/domainhelpers.cpp
Install file: "ripley/src/LameAssembler2D.h" as "debian/stage3/include/ripley/LameAssembler2D.h"
g++ -o debian/tmp3/posix/ripley/src/LameAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/LameAssembler2D.cpp
g++ -o debian/tmp3/posix/ripley/src/LameAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/LameAssembler3D.cpp
g++ -o debian/tmp3/posix/ripley/src/MultiBrick.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/MultiBrick.cpp
g++ -o debian/tmp3/posix/ripley/src/MultiRectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/MultiRectangle.cpp
Install file: "ripley/src/WaveAssembler2D.h" as "debian/stage3/include/ripley/WaveAssembler2D.h"
g++ -o debian/tmp3/posix/ripley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/Rectangle.cpp
g++ -o debian/tmp3/posix/ripley/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/RipleyDomain.cpp
g++ -o debian/tmp3/posix/ripley/src/WaveAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/WaveAssembler2D.cpp
g++ -o debian/tmp3/posix/ripley/src/WaveAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/WaveAssembler3D.cpp
/usr/bin/python3 scripts/py_comp.py speckley/py_src/__init__.py debian/tmp3/posix/speckley/py/__init__.pyc
Install file: "debian/tmp3/posix/speckley/py/__init__.pyc" as "debian/stage3/esys/speckley/__init__.pyc"
Install file: "speckley/src/AbstractAssembler.h" as "debian/stage3/include/speckley/AbstractAssembler.h"
Install file: "speckley/src/Brick.h" as "debian/stage3/include/speckley/Brick.h"
Install file: "speckley/src/Rectangle.h" as "debian/stage3/include/speckley/Rectangle.h"
Install file: "speckley/src/domainhelpers.h" as "debian/stage3/include/speckley/domainhelpers.h"
Install file: "speckley/src/SpeckleyDomain.h" as "debian/stage3/include/speckley/SpeckleyDomain.h"
Install file: "speckley/src/Speckley.h" as "debian/stage3/include/speckley/Speckley.h"
Install file: "speckley/src/SpeckleyException.h" as "debian/stage3/include/speckley/SpeckleyException.h"
Install file: "speckley/src/system_dep.h" as "debian/stage3/include/speckley/system_dep.h"
g++ -o debian/tmp3/posix/speckley/src/speckleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/speckleycpp.cpp
In file included from /usr/include/c++/9/vector:72,
                 from debian/stage3/include/escript/DataTypes.h:28,
                 from debian/stage3/include/speckley/system_dep.h:21,
                 from debian/stage3/include/speckley/Speckley.h:26,
                 from debian/stage3/include/speckley/domainhelpers.h:20,
                 from debian/stage3/include/speckley/AbstractAssembler.h:21,
                 from speckley/src/speckleycpp.cpp:18:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from debian/stage3/include/escript/DataTypes.h:28,
                 from debian/stage3/include/speckley/system_dep.h:21,
                 from debian/stage3/include/speckley/Speckley.h:26,
                 from debian/stage3/include/speckley/domainhelpers.h:20,
                 from debian/stage3/include/speckley/AbstractAssembler.h:21,
                 from speckley/src/speckleycpp.cpp:18:
/usr/include/c++/9/bits/stl_vector.h: In function 'escript::Domain_ptr speckley::_brick(int, double, double, double, const boost::python::api::object&, const boost::python::api::object&, const boost::python::api::object&, int, int, int, const boost::python::api::object&, const boost::python::api::object&, escript::SubWorld_ptr)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'escript::Domain_ptr speckley::_rectangle(int, double, double, const boost::python::api::object&, const boost::python::api::object&, int, int, const boost::python::api::object&, const boost::python::api::object&, escript::SubWorld_ptr)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
g++ -o debian/tmp3/posix/speckley/src/AbstractAssembler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/AbstractAssembler.cpp
Install file: "speckley/src/CrossDomainCoupler.h" as "debian/stage3/include/speckley/CrossDomainCoupler.h"
Install file: "speckley/src/DefaultAssembler3D.h" as "debian/stage3/include/speckley/DefaultAssembler3D.h"
Install file: "speckley/src/WaveAssembler3D.h" as "debian/stage3/include/speckley/WaveAssembler3D.h"
g++ -o debian/tmp3/posix/speckley/src/Brick.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/Brick.cpp
g++ -o debian/tmp3/posix/speckley/src/BrickGradients.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/BrickGradients.cpp
g++ -o debian/tmp3/posix/speckley/src/BrickIntegrals.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/BrickIntegrals.cpp
g++ -o debian/tmp3/posix/speckley/src/BrickReductions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/BrickReductions.cpp
Install file: "speckley/src/DefaultAssembler2D.h" as "debian/stage3/include/speckley/DefaultAssembler2D.h"
g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/DefaultAssembler2D.cpp
g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/DefaultAssembler3D.cpp
g++ -o debian/tmp3/posix/speckley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/domainhelpers.cpp
Install file: "speckley/src/WaveAssembler2D.h" as "debian/stage3/include/speckley/WaveAssembler2D.h"
g++ -o debian/tmp3/posix/speckley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/Rectangle.cpp
g++ -o debian/tmp3/posix/speckley/src/RectangleGradients.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/RectangleGradients.cpp
g++ -o debian/tmp3/posix/speckley/src/RectangleIntegrals.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/RectangleIntegrals.cpp
g++ -o debian/tmp3/posix/speckley/src/RectangleReductions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/RectangleReductions.cpp
g++ -o debian/tmp3/posix/speckley/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/SpeckleyDomain.cpp
g++ -o debian/tmp3/posix/speckley/src/WaveAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/WaveAssembler2D.cpp
g++ -o debian/tmp3/posix/speckley/src/WaveAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/WaveAssembler3D.cpp
Install file: "speckley/src/lagrange_functions.h" as "debian/stage3/include/speckley/lagrange_functions.h"
g++ -o debian/tmp3/posix/speckley/src/CrossDomainCoupler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/CrossDomainCoupler.cpp
Install file: "weipa/src/DataVar.h" as "debian/stage3/include/weipa/DataVar.h"
Install file: "weipa/src/DomainChunk.h" as "debian/stage3/include/weipa/DomainChunk.h"
Install file: "weipa/src/ElementData.h" as "debian/stage3/include/weipa/ElementData.h"
Install file: "weipa/src/EscriptDataset.h" as "debian/stage3/include/weipa/EscriptDataset.h"
Install file: "weipa/src/NodeData.h" as "debian/stage3/include/weipa/NodeData.h"
Install file: "weipa/src/VisItControl.h" as "debian/stage3/include/weipa/VisItControl.h"
Install file: "weipa/src/vtkCellType.h" as "debian/stage3/include/weipa/vtkCellType.h"
Install file: "weipa/src/WeipaException.h" as "debian/stage3/include/weipa/WeipaException.h"
Install file: "weipa/src/weipa.h" as "debian/stage3/include/weipa/weipa.h"
Install file: "weipa/src/FinleyDomain.h" as "debian/stage3/include/weipa/FinleyDomain.h"
Install file: "weipa/src/FinleyElements.h" as "debian/stage3/include/weipa/FinleyElements.h"
Install file: "weipa/src/FinleyNodes.h" as "debian/stage3/include/weipa/FinleyNodes.h"
Install file: "weipa/src/RipleyDomain.h" as "debian/stage3/include/weipa/RipleyDomain.h"
Install file: "weipa/src/RipleyElements.h" as "debian/stage3/include/weipa/RipleyElements.h"
Install file: "weipa/src/RipleyNodes.h" as "debian/stage3/include/weipa/RipleyNodes.h"
Install file: "weipa/src/SpeckleyDomain.h" as "debian/stage3/include/weipa/SpeckleyDomain.h"
Install file: "weipa/src/SpeckleyElements.h" as "debian/stage3/include/weipa/SpeckleyElements.h"
Install file: "weipa/src/SpeckleyNodes.h" as "debian/stage3/include/weipa/SpeckleyNodes.h"
g++ -o debian/tmp3/posix/weipa/src/DataVar.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/DataVar.cpp
g++ -o debian/tmp3/posix/weipa/src/EscriptDataset.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/EscriptDataset.cpp
g++ -o debian/tmp3/posix/weipa/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/FinleyDomain.cpp
g++ -o debian/tmp3/posix/weipa/src/FinleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/FinleyElements.cpp
g++ -o debian/tmp3/posix/weipa/src/FinleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/FinleyNodes.cpp
g++ -o debian/tmp3/posix/weipa/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/RipleyDomain.cpp
g++ -o debian/tmp3/posix/weipa/src/RipleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/RipleyElements.cpp
g++ -o debian/tmp3/posix/weipa/src/RipleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/RipleyNodes.cpp
g++ -o debian/tmp3/posix/weipa/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/SpeckleyDomain.cpp
g++ -o debian/tmp3/posix/weipa/src/SpeckleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/SpeckleyElements.cpp
g++ -o debian/tmp3/posix/weipa/src/SpeckleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/SpeckleyNodes.cpp
g++ -o debian/tmp3/posix/weipa/src/VisItControl.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/VisItControl.cpp
g++ -o debian/tmp3/posix/weipa/src/weipacpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -Wno-maybe-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.7m -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/weipacpp.cpp
g++ -o debian/tmp3/posix/ripley/src/libripley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/ripley/src/blocktools.os debian/tmp3/posix/ripley/src/blocktools2.os debian/tmp3/posix/ripley/src/Brick.os debian/tmp3/posix/ripley/src/DefaultAssembler2D.os debian/tmp3/posix/ripley/src/DefaultAssembler3D.os debian/tmp3/posix/ripley/src/domainhelpers.os debian/tmp3/posix/ripley/src/LameAssembler2D.os debian/tmp3/posix/ripley/src/LameAssembler3D.os debian/tmp3/posix/ripley/src/MultiBrick.os debian/tmp3/posix/ripley/src/MultiRectangle.os debian/tmp3/posix/ripley/src/Rectangle.os debian/tmp3/posix/ripley/src/RipleyDomain.os debian/tmp3/posix/ripley/src/WaveAssembler2D.os debian/tmp3/posix/ripley/src/WaveAssembler3D.os -Ldebian/stage3/lib -L/usr/lib/python3.7/config-3.7m-arm-linux-gnueabihf -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lsiloh5 -lpython3.7m -lboost_python38
Install file: "debian/tmp3/posix/ripley/src/libripley.so" as "debian/stage3/lib/libripley.so"
g++ -o debian/tmp3/posix/ripley/src/ripleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/ripley/src/ripleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.7/config-3.7m-arm-linux-gnueabihf -L/usr/lib -lripley -lpaso -lescript -lnetcdf_c++4 -lsiloh5 -lpython3.7m -lboost_python38
g++ -o debian/tmp3/posix/speckley/src/libspeckley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/speckley/src/AbstractAssembler.os debian/tmp3/posix/speckley/src/Brick.os debian/tmp3/posix/speckley/src/BrickGradients.os debian/tmp3/posix/speckley/src/BrickIntegrals.os debian/tmp3/posix/speckley/src/BrickReductions.os debian/tmp3/posix/speckley/src/DefaultAssembler2D.os debian/tmp3/posix/speckley/src/DefaultAssembler3D.os debian/tmp3/posix/speckley/src/domainhelpers.os debian/tmp3/posix/speckley/src/Rectangle.os debian/tmp3/posix/speckley/src/RectangleGradients.os debian/tmp3/posix/speckley/src/RectangleIntegrals.os debian/tmp3/posix/speckley/src/RectangleReductions.os debian/tmp3/posix/speckley/src/SpeckleyDomain.os debian/tmp3/posix/speckley/src/WaveAssembler2D.os debian/tmp3/posix/speckley/src/WaveAssembler3D.os debian/tmp3/posix/speckley/src/CrossDomainCoupler.os -Ldebian/stage3/lib -L/usr/lib/python3.7/config-3.7m-arm-linux-gnueabihf -L/usr/lib -lripley -lpaso -lescript -lnetcdf_c++4 -lsiloh5 -lpython3.7m -lboost_python38
Install file: "debian/tmp3/posix/ripley/src/ripleycpp.so" as "debian/stage3/esys/ripley/ripleycpp.so"
Install file: "debian/tmp3/posix/speckley/src/libspeckley.so" as "debian/stage3/lib/libspeckley.so"
g++ -o debian/tmp3/posix/weipa/src/libweipa.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/weipa/src/DataVar.os debian/tmp3/posix/weipa/src/EscriptDataset.os debian/tmp3/posix/weipa/src/FinleyDomain.os debian/tmp3/posix/weipa/src/FinleyElements.os debian/tmp3/posix/weipa/src/FinleyNodes.os debian/tmp3/posix/weipa/src/RipleyDomain.os debian/tmp3/posix/weipa/src/RipleyElements.os debian/tmp3/posix/weipa/src/RipleyNodes.os debian/tmp3/posix/weipa/src/SpeckleyDomain.os debian/tmp3/posix/weipa/src/SpeckleyElements.os debian/tmp3/posix/weipa/src/SpeckleyNodes.os debian/tmp3/posix/weipa/src/VisItControl.os -Ldebian/stage3/lib -L/usr/lib/python3.7/config-3.7m-arm-linux-gnueabihf -L/usr/lib -ldudley -lfinley -lspeckley -lripley -lpaso -lescript -lnetcdf_c++4 -lsiloh5 -lpython3.7m -lboost_python38
g++ -o debian/tmp3/posix/speckley/src/speckleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/speckley/src/speckleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.7/config-3.7m-arm-linux-gnueabihf -L/usr/lib -lspeckley -lripley -lpaso -lescript -lnetcdf_c++4 -lsiloh5 -lpython3.7m -lboost_python38
Install file: "debian/tmp3/posix/speckley/src/speckleycpp.so" as "debian/stage3/esys/speckley/speckleycpp.so"
Install file: "debian/tmp3/posix/weipa/src/libweipa.so" as "debian/stage3/lib/libweipa.so"
g++ -o debian/tmp3/posix/weipa/src/weipacpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/weipa/src/weipacpp.os -Ldebian/stage3/lib -L/usr/lib/python3.7/config-3.7m-arm-linux-gnueabihf -L/usr/lib -lweipa -ldudley -lfinley -lspeckley -lripley -lpaso -lescript -lnetcdf_c++4 -lsiloh5 -lpython3.7m -lboost_python38
Install file: "debian/tmp3/posix/weipa/src/weipacpp.so" as "debian/stage3/esys/weipa/weipacpp.so"
/usr/bin/python3 scripts/py_comp.py weipa/py_src/__init__.py debian/tmp3/posix/weipa/py/__init__.pyc
Install file: "debian/tmp3/posix/weipa/py/__init__.pyc" as "debian/stage3/esys/weipa/__init__.pyc"
/usr/bin/python3 doc/sphinx_api/genrst.py /<<PKGBUILDDIR>>/debian/stage3 esys /<<PKGBUILDDIR>>/debian/tmp3/sphinx_int && sphinx-build -v -E --color -b html -d /<<PKGBUILDDIR>>/debian/tmp3/sphinx_int/tree -c doc/sphinx_api -D mathjax_path=file:///usr/share/javascript/mathjax/MathJax.js /<<PKGBUILDDIR>>/debian/tmp3/sphinx_int /<<PKGBUILDDIR>>/debian/stage3/release/doc/sphinx_api
Beginning  /<<PKGBUILDDIR>>/debian/stage3/esys
esys
Package is empty
-------------esys
Beginning  /<<PKGBUILDDIR>>/debian/stage3/esys/downunder
esys.downunder
Import error for esys.downunder  /usr/lib/arm-linux-gnueabihf/libboost_python38.so.1.67.0: undefined symbol: _Py_tracemalloc_config
scons: *** [debian/tmp3/posix/doc/sphinx_api/stuff] Error 1
scons: building terminated because of errors.

*** Config Summary (see config.log and <prefix>/lib/buildvars for details) ***
Escript revision 6948

  Install prefix:  /<<PKGBUILDDIR>>/debian/stage3
          Python:  /usr/bin/python3 (Version 3.7.6)
           boost:  /usr (Version 1.67.0)
     boost numpy:  NO
        trilinos:  NO
           numpy:  YES (with headers)
            gmsh:  YES
  Solver library:  paso
   Direct solver:  NONE
         domains:  dudley, finley, ripley, speckley
          netcdf:  YES (4 + 3)
           weipa:  YES
          openmp:  YES
            gdal:  YES
          pyproj:  YES
           scipy:  YES
            silo:  YES

  DISABLED features: cppunit debug gzip lapack mkl mpi parmetis sympy trilinos umfpack visit
  NOT treating warnings as errors

WARNING: escript does not support sympy version 1.2 and higher. Found version 1.4

ERROR: build stopped due to errors

make[1]: *** [debian/rules:66: override_dh_auto_build] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:39: build-arch] Error 2
dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2020-03-01T11:36:33Z

Finished
--------


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 0
Build-Time: 5235
Distribution: bullseye-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 2951
Job: python-escript_5.5-4
Machine Architecture: armhf
Package: python-escript
Package-Time: 8253
Source-Version: 5.5-4
Space: 0
Status: failed
Version: 5.5-4
--------------------------------------------------------------------------------
Finished at 2020-03-01T11:36:33Z
Build needed 00:00:00, 0k disc space
Raspbian Package Auto-Building

Build log for python-escript (5.5-4) on armhf
