python-biom-format →
2.1.10-1 →
armhf → 2020-12-11 08:15:35
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-02
+==============================================================================+
| python-biom-format 2.1.10-1 (armhf) Fri, 11 Dec 2020 07:43:18 +0000 |
+==============================================================================+
Package: python-biom-format
Version: 2.1.10-1
Source Version: 2.1.10-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-01c41292-440d-4e2e-8cc3-d3c2f5537823' with '<<CHROOT>>'
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| Update chroot |
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Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [12.0 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [13.0 MB]
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| Fetch source files |
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Check APT
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Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'python-biom-format' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/python-biom-format.git
Please use:
git clone https://salsa.debian.org/med-team/python-biom-format.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 8545 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main python-biom-format 2.1.10-1 (dsc) [2600 B]
Get:2 http://172.17.0.1/private bullseye-staging/main python-biom-format 2.1.10-1 (tar) [8532 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main python-biom-format 2.1.10-1 (diff) [10.4 kB]
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I: NOTICE: Log filtering will replace 'build/python-biom-format-mEQ8y5/python-biom-format-2.1.10' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/python-biom-format-mEQ8y5' with '<<BUILDDIR>>'
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| Install build-essential |
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Setup apt archive
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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-O5XMDy/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
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gpg: /<<BUILDDIR>>/resolver-O5XMDy/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-O5XMDy/apt_archive ./ InRelease
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils krb5-locales libnss-nis libnss-nisplus libpam-cap netbase
sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 852 B of archives.
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Get:1 copy:/<<BUILDDIR>>/resolver-O5XMDy/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12797 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
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| Check architectures |
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Arch check ok (armhf included in any-amd64 any-arm64 any-i386 any-mips64el any-ppc64el armel armhf mipsel all)
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| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-nose, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest, python3-pytest-cov
Filtered Build-Depends: debhelper-compat (= 13), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-nose, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest, python3-pytest-cov
dpkg-deb: building package 'sbuild-build-depends-python-biom-format-dummy' in '/<<BUILDDIR>>/resolver-O5XMDy/apt_archive/sbuild-build-depends-python-biom-format-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-python-biom-format-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-O5XMDy/apt_archive ./ InRelease
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Get:4 copy:/<<BUILDDIR>>/resolver-O5XMDy/apt_archive ./ Sources [611 B]
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Reading package lists...
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Reading package lists...
Install python-biom-format build dependencies (apt-based resolver)
------------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libnss-nis libnss-nisplus libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bash-completion ca-certificates
cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism
docutils-common dwz file fonts-lyx gettext gettext-base groff-base help2man
intltool-debian libaec0 libarchive-zip-perl libblas3 libbrotli1 libbsd0
libcroco3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libfreetype6 libgfortran5 libglib2.0-0
libhdf5-103-1 libhdf5-hl-100 libicu67 libimagequant0 libjbig0
libjpeg62-turbo libjs-jquery libjs-jquery-hotkeys libjs-jquery-isonscreen
libjs-jquery-metadata libjs-jquery-tablesorter
libjs-jquery-throttle-debounce libjs-jquery-ui libjs-sphinxdoc
libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 liblocale-gettext-perl
liblzf1 libmagic-mgc libmagic1 libpipeline1 libpng16-16 libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.9 libpython3.9-dev
libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libsub-override-perl
libsz2 libtiff5 libtool libuchardet0 libwebp6 libwebpdemux2 libwebpmux3
libxau6 libxcb1 libxdmcp6 libxml2 m4 mailcap man-db media-types mime-support
node-jquery openssl po-debconf python-babel-localedata
python-matplotlib-data python3 python3-alabaster python3-all python3-all-dev
python3-atomicwrites python3-attr python3-babel python3-certifi
python3-chardet python3-click python3-colorama python3-cov-core
python3-coverage python3-cycler python3-dateutil python3-decorator
python3-dev python3-distutils python3-docutils python3-future python3-h5py
python3-h5py-serial python3-idna python3-imagesize
python3-importlib-metadata python3-jinja2 python3-kiwisolver python3-lib2to3
python3-markupsafe python3-matplotlib python3-minimal python3-more-itertools
python3-nose python3-nose2 python3-numpy python3-packaging python3-pandas
python3-pandas-lib python3-pil python3-pkg-resources python3-pluggy
python3-py python3-pygments python3-pyparsing python3-pytest
python3-pytest-cov python3-requests python3-roman python3-scipy
python3-setuptools python3-six python3-snowballstemmer python3-sphinx
python3-tz python3-urllib3 python3-wcwidth python3-zipp python3.9
python3.9-dev python3.9-minimal sgml-base sphinx-common ttf-bitstream-vera
xml-core zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cython-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev groff libjs-jquery-ui-docs liblcms2-utils
libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less
www-browser libmail-box-perl python3-doc python3-tk python3-venv
python-attr-doc python-coverage-doc python-cycler-doc docutils-doc
fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french
texlive-latex-base texlive-latex-recommended python-future-doc
python-h5py-doc python-jinja2-doc dvipng ffmpeg ghostscript gir1.2-gtk-3.0
inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi
python3-gi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip
python3-tornado texlive-extra-utils texlive-latex-extra ttf-staypuft
python-nose-doc python-nose2-doc gfortran python-numpy-doc python3-numpy-dbg
python-pandas-doc python3-statsmodels python-pil-doc python3-pil-dbg
subversion python-pygments-doc python-pyparsing-doc python3-cryptography
python3-openssl python3-socks python-requests-doc python-scipy-doc
python-setuptools-doc python3-stemmer fonts-freefont-otf imagemagick-6.q16
latexmk libjs-mathjax python3-sphinx-rtd-theme sphinx-doc
texlive-fonts-recommended texlive-plain-generic python3.9-venv python3.9-doc
binfmt-support sgml-base-doc
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs javascript-common libltdl-dev libjs-sizzle
libmail-sendmail-perl libpaper-utils python3-tk python3-bottleneck
python3-numexpr python3-odf python3-openpyxl python3-xlrd python3-xlwt
python3-bs4 python3-html5lib python3-lxml python3-tables python3-olefile
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bash-completion ca-certificates
cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism
docutils-common dwz file fonts-lyx gettext gettext-base groff-base help2man
intltool-debian libaec0 libarchive-zip-perl libblas3 libbrotli1 libbsd0
libcroco3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libfreetype6 libgfortran5 libglib2.0-0
libhdf5-103-1 libhdf5-hl-100 libicu67 libimagequant0 libjbig0
libjpeg62-turbo libjs-jquery libjs-jquery-hotkeys libjs-jquery-isonscreen
libjs-jquery-metadata libjs-jquery-tablesorter
libjs-jquery-throttle-debounce libjs-jquery-ui libjs-sphinxdoc
libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 liblocale-gettext-perl
liblzf1 libmagic-mgc libmagic1 libpipeline1 libpng16-16 libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.9 libpython3.9-dev
libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libsub-override-perl
libsz2 libtiff5 libtool libuchardet0 libwebp6 libwebpdemux2 libwebpmux3
libxau6 libxcb1 libxdmcp6 libxml2 m4 mailcap man-db media-types mime-support
node-jquery openssl po-debconf python-babel-localedata
python-matplotlib-data python3 python3-alabaster python3-all python3-all-dev
python3-atomicwrites python3-attr python3-babel python3-certifi
python3-chardet python3-click python3-colorama python3-cov-core
python3-coverage python3-cycler python3-dateutil python3-decorator
python3-dev python3-distutils python3-docutils python3-future python3-h5py
python3-h5py-serial python3-idna python3-imagesize
python3-importlib-metadata python3-jinja2 python3-kiwisolver python3-lib2to3
python3-markupsafe python3-matplotlib python3-minimal python3-more-itertools
python3-nose python3-nose2 python3-numpy python3-packaging python3-pandas
python3-pandas-lib python3-pil python3-pkg-resources python3-pluggy
python3-py python3-pygments python3-pyparsing python3-pytest
python3-pytest-cov python3-requests python3-roman python3-scipy
python3-setuptools python3-six python3-snowballstemmer python3-sphinx
python3-tz python3-urllib3 python3-wcwidth python3-zipp python3.9
python3.9-dev python3.9-minimal
sbuild-build-depends-python-biom-format-dummy sgml-base sphinx-common
ttf-bitstream-vera xml-core zlib1g-dev
0 upgraded, 154 newly installed, 0 to remove and 0 not upgraded.
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Get:2 http://172.17.0.1/private bullseye-staging/main armhf liblocale-gettext-perl armhf 1.07-4+b1 [18.3 kB]
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Get:47 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.3 [580 kB]
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Get:50 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
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Get:69 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-103-1 armhf 1.10.6+repack-2 [1184 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-hl-100 armhf 1.10.6+repack-2 [78.1 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libimagequant0 armhf 2.12.2-1.1 [27.2 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:2.0.5-1.1 [121 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-metadata all 12-1.1 [7420 B]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-tablesorter all 1:2.31.3+dfsg1-1 [185 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-throttle-debounce all 1.1+dfsg.1-1 [6178 B]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-ui all 1.12.1+dfsg-7 [232 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libjs-underscore all 1.9.1~dfsg-1 [99.4 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libjs-sphinxdoc all 3.3.1-1 [124 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-3 [1597 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf liblbfgsb0 armhf 3.0+dfsg.3-9 [24.6 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf liblcms2-2 armhf 2.9-4 [119 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf liblzf1 armhf 3.6-3 [9268 B]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9 armhf 3.9.1~rc1-2+rpi1 [1412 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-dev armhf 3.9.1~rc1-2+rpi1 [3057 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libpython3-dev armhf 3.9.0-4 [21.2 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libpython3-all-dev armhf 3.9.0-4 [1068 B]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libwebpdemux2 armhf 0.6.1-2 [86.7 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libwebpmux3 armhf 0.6.1-2 [94.2 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf python-babel-localedata all 2.8.0+dfsg.1-4 [4996 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf ttf-bitstream-vera all 1.10-8 [352 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf python-matplotlib-data all 3.3.2-2 [4153 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf python3-alabaster all 0.7.8-1.1 [18.6 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf python3-all armhf 3.9.0-4 [1056 B]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf python3.9-dev armhf 3.9.1~rc1-2+rpi1 [501 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf python3-dev armhf 3.9.0-4 [1164 B]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf python3-all-dev armhf 3.9.0-4 [1060 B]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf python3-atomicwrites all 1.4.0-1 [10.2 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf python3-attr all 20.3.0-1 [52.9 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 50.3.0-1 [187 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf python3-tz all 2020.4-2 [34.8 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf python3-babel all 2.8.0+dfsg.1-4 [99.9 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf python3-certifi all 2020.6.20-1 [151 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf python3-chardet all 3.0.4-7 [81.1 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf python3-colorama all 0.4.4-1 [28.5 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf python3-click all 7.1.2-1 [75.7 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf python3-coverage armhf 5.1+dfsg.1-2+b1 [167 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf python3-six all 1.15.0-2 [16.9 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf python3-nose2 all 0.9.2-1 [94.1 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf python3-cov-core all 1.15.0-3 [7528 B]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf python3-cycler all 0.10.0-3 [8084 B]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf python3-dateutil all 2.8.1-4 [81.6 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf python3-decorator all 4.4.2-2 [15.8 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf python3-roman all 2.0.0-5 [9064 B]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf python3-docutils all 0.16+dfsg-3 [384 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf python3-future all 0.18.2-4 [348 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf python3-numpy armhf 1:1.19.4-1+b2 [2930 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf python3-h5py-serial armhf 2.10.0-9+b1 [580 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf python3-h5py all 2.10.0-9 [11.4 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf python3-idna all 2.10-1 [37.4 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf python3-imagesize all 1.2.0-2 [5824 B]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf python3-more-itertools all 4.2.0-3 [42.7 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf python3-zipp all 1.0.0-3 [6060 B]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf python3-importlib-metadata all 1.6.0-2 [10.3 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf python3-markupsafe armhf 1.1.1-1+b1 [14.8 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf python3-jinja2 all 2.11.2-1 [113 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf python3-kiwisolver armhf 1.3.1-1 [272 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf python3-pyparsing all 2.4.7-1 [109 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf python3-pil armhf 8.0.1-1+b1 [423 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf python3-matplotlib armhf 3.3.2-2+b1 [4167 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf python3-nose all 1.3.7-7 [133 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf python3-packaging all 20.4-1 [30.4 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas-lib armhf 1.1.4+dfsg-1+rpi1 [2864 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas all 1.1.4+dfsg-1+rpi1 [2092 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf python3-pluggy all 0.13.0-5 [22.1 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf python3-py all 1.9.0-2 [94.1 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf python3-pygments all 2.7.1+dfsg-1 [656 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf python3-wcwidth all 0.1.9+dfsg1-2 [18.2 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf python3-pytest all 4.6.11-1 [268 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-isonscreen all 1.2.0-1 [3046 B]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf python3-pytest-cov all 2.8.1-1 [22.1 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf python3-urllib3 all 1.25.11-1 [107 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf python3-requests all 2.24.0+dfsg-1 [71.7 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf python3-scipy armhf 1.5.4-1 [12.0 MB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf python3-setuptools all 50.3.0-1 [511 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf python3-snowballstemmer all 2.0.0-2 [58.2 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf sphinx-common all 3.3.1-1 [575 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf python3-sphinx all 3.3.1-1 [537 kB]
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Setting up python3.9 (3.9.1~rc1-2+rpi1) ...
Setting up liblbfgsb0:armhf (3.0+dfsg.3-9) ...
Setting up libhdf5-hl-100:armhf (1.10.6+repack-2) ...
Setting up automake (1:1.16.2-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up gettext (0.19.8.1-10) ...
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Setting up python3 (3.9.0-4) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-markupsafe (1.1.1-1+b1) ...
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Setting up python3-jinja2 (2.11.2-1) ...
Setting up libjs-jquery-ui (1.12.1+dfsg-7) ...
Setting up python3-wcwidth (0.1.9+dfsg1-2) ...
Setting up python3-pyparsing (2.4.7-1) ...
Setting up python3-certifi (2020.6.20-1) ...
Setting up python3-snowballstemmer (2.0.0-2) ...
Setting up libjs-jquery-metadata (12-1.1) ...
Setting up python3-cycler (0.10.0-3) ...
Setting up python3-kiwisolver (1.3.1-1) ...
Setting up libjs-jquery-isonscreen (1.2.0-1) ...
Setting up python3-idna (2.10-1) ...
Setting up cython3 (0.29.21-3+b1) ...
Setting up libjs-sphinxdoc (3.3.1-1) ...
Setting up python3-urllib3 (1.25.11-1) ...
Setting up python3.9-dev (3.9.1~rc1-2+rpi1) ...
Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-1) ...
Setting up python3-dateutil (2.8.1-4) ...
Setting up python3-lib2to3 (3.8.6-1) ...
Setting up python3-imagesize (1.2.0-2) ...
Setting up python3-pkg-resources (50.3.0-1) ...
Setting up python3-distutils (3.8.6-1) ...
Setting up dh-python (4.20201102) ...
Setting up python3-more-itertools (4.2.0-3) ...
Setting up python3-attr (20.3.0-1) ...
Setting up libpython3-dev:armhf (3.9.0-4) ...
Setting up python3-setuptools (50.3.0-1) ...
Setting up python3-py (1.9.0-2) ...
Setting up python3-babel (2.8.0+dfsg.1-4) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
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Setting up python3-nose2 (0.9.2-1) ...
Setting up python3-zipp (1.0.0-3) ...
Setting up python3-click (7.1.2-1) ...
Setting up python3-nose (1.3.7-7) ...
Setting up python3-pygments (2.7.1+dfsg-1) ...
Setting up python3-packaging (20.4-1) ...
Setting up python3-chardet (3.0.4-7) ...
Setting up libpython3-all-dev:armhf (3.9.0-4) ...
Setting up sphinx-common (3.3.1-1) ...
Setting up python3-dev (3.9.0-4) ...
Setting up python3-requests (2.24.0+dfsg-1) ...
Setting up python3-numpy (1:1.19.4-1+b2) ...
Setting up python3-future (0.18.2-4) ...
update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode
update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode
Setting up python3-all-dev (3.9.0-4) ...
Setting up python3-matplotlib (3.3.2-2+b1) ...
Setting up python3-scipy (1.5.4-1) ...
Setting up python3-importlib-metadata (1.6.0-2) ...
Setting up python3-cov-core (1.15.0-3) ...
Setting up python3-pandas-lib:armhf (1.1.4+dfsg-1+rpi1) ...
Setting up python3-h5py-serial (2.10.0-9+b1) ...
Setting up python3-pandas (1.1.4+dfsg-1+rpi1) ...
Setting up python3-h5py (2.10.0-9) ...
Setting up python3-pluggy (0.13.0-5) ...
Setting up python3-pytest (4.6.11-1) ...
Setting up python3-pytest-cov (2.8.1-1) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (13.2.1) ...
Processing triggers for libc-bin (2.31-5+rpi1) ...
Processing triggers for sgml-base (1.30) ...
Setting up docutils-common (0.16+dfsg-3) ...
Processing triggers for sgml-base (1.30) ...
Setting up python3-docutils (0.16+dfsg-3) ...
update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
Setting up python3-sphinx (3.3.1-1) ...
Setting up sbuild-build-depends-python-biom-format-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.35.1-4+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.0-19+rpi1 gcc-10_10.2.0-19+rpi1 libc6-dev_2.31-5+rpi1 libstdc++-10-dev_10.2.0-19+rpi1 libstdc++6_10.2.0-19+rpi1 linux-libc-dev_5.9.6-1+rpi1+b1
Package versions: adduser_3.118 apt_2.1.12 aptitude_0.8.13-2 aptitude-common_0.8.13-2 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1~rc3-1 bash-completion_1:2.11-2 binutils_2.35.1-4+rpi1 binutils-arm-linux-gnueabihf_2.35.1-4+rpi1 binutils-common_2.35.1-4+rpi1 bsdextrautils_2.36.1-2 bsdutils_1:2.36.1-2 build-essential_12.8 bzip2_1.0.8-4 ca-certificates_20200601 coreutils_8.32-4 cpp_4:10.2.0-1+rpi1 cpp-10_10.2.0-19+rpi1 cython3_0.29.21-3+b1 dash_0.5.11+git20200708+dd9ef66-2 debconf_1.5.74 debhelper_13.2.1 debianutils_4.11.2 dh-autoreconf_19 dh-python_4.20201102 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 docutils-common_0.16+dfsg-3 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1.1 fdisk_2.36.1-2 file_1:5.38-5 findutils_4.7.0+git20201010-2 fonts-lyx_2.3.6-1 g++_4:10.2.0-1+rpi1 g++-10_10.2.0-19+rpi1 gcc_4:10.2.0-1+rpi1 gcc-10_10.2.0-19+rpi1 gcc-10-base_10.2.0-19+rpi1 gcc-6-base_6.5.0-1+rpi3 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-5+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 help2man_1.47.16 hostname_3.23 init-system-helpers_1.59 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20200821-2 krb5-locales_1.18.3-4 libacl1_2.2.53-8 libaec0_1.0.4-1 libapt-pkg6.0_2.1.12 libarchive-zip-perl_1.68-1 libasan6_10.2.0-19+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-19+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1+b1 libbinutils_2.35.1-4+rpi1 libblas3_3.9.0-3 libblkid1_2.36.1-2 libboost-iostreams1.71.0_1.71.0-7+b1 libbrotli1_1.0.9-2+b1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-4 libc-bin_2.31-5+rpi1 libc-dev-bin_2.31-5+rpi1 libc6_2.31-5+rpi1 libc6-dev_2.31-5+rpi1 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libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:2.0.5-1.1 libjs-jquery_3.5.1+dfsg+~3.5.4-3 libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2 libjs-jquery-isonscreen_1.2.0-1 libjs-jquery-metadata_12-1.1 libjs-jquery-tablesorter_1:2.31.3+dfsg1-1 libjs-jquery-throttle-debounce_1.1+dfsg.1-1 libjs-jquery-ui_1.12.1+dfsg-7 libjs-sphinxdoc_3.3.1-1 libjs-underscore_1.9.1~dfsg-1 libk5crypto3_1.18.3-4 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-4 libkrb5support0_1.18.3-4 libksba8_1.5.0-2 liblapack3_3.9.0-3 liblbfgsb0_3.0+dfsg.3-9 liblcms2-2_2.9-4 libldap-2.4-2_2.4.56+dfsg-1+rpi1+b1 libldap-common_2.4.56+dfsg-1+rpi1 liblocale-gettext-perl_1.07-4+b1 liblz4-1_1.9.2-2 liblzf1_3.6-3 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36.1-2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncursesw6_6.2+20201114-1 libnettle8_3.6-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libp11-kit0_0.23.21-2 libpam-cap_1:2.44-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 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libudev1_246.6-4+rpi1 libunistring2_0.9.10-4 libuuid1_2.36.1-2 libwebp6_0.6.1-2 libwebpdemux2_0.6.1-2 libwebpmux3_0.6.1-2 libxapian30_1.4.17-1 libxau6_1:1.0.8-1+b2 libxcb1_1.14-2 libxdmcp6_1:1.1.2-3 libxml2_2.9.10+dfsg-6.3 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.9.6-1+rpi1+b1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 mailcap_3.67 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 media-types_1.0.1 mime-support_3.66 mount_2.36.1-2 ncurses-base_6.2+20201114-1 ncurses-bin_6.2+20201114-1 netbase_6.2 node-jquery_3.5.1+dfsg+~3.5.4-3 openssl_1.1.1h-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.32_5.32.0-5 pinentry-curses_1.1.0-4 po-debconf_1.0.21 python-babel-localedata_2.8.0+dfsg.1-4 python-matplotlib-data_3.3.2-2 python3_3.9.0-4 python3-alabaster_0.7.8-1.1 python3-all_3.9.0-4 python3-all-dev_3.9.0-4 python3-atomicwrites_1.4.0-1 python3-attr_20.3.0-1 python3-babel_2.8.0+dfsg.1-4 python3-certifi_2020.6.20-1 python3-chardet_3.0.4-7 python3-click_7.1.2-1 python3-colorama_0.4.4-1 python3-cov-core_1.15.0-3 python3-coverage_5.1+dfsg.1-2+b1 python3-cycler_0.10.0-3 python3-dateutil_2.8.1-4 python3-decorator_4.4.2-2 python3-dev_3.9.0-4 python3-distutils_3.8.6-1 python3-docutils_0.16+dfsg-3 python3-future_0.18.2-4 python3-h5py_2.10.0-9 python3-h5py-serial_2.10.0-9+b1 python3-idna_2.10-1 python3-imagesize_1.2.0-2 python3-importlib-metadata_1.6.0-2 python3-jinja2_2.11.2-1 python3-kiwisolver_1.3.1-1 python3-lib2to3_3.8.6-1 python3-markupsafe_1.1.1-1+b1 python3-matplotlib_3.3.2-2+b1 python3-minimal_3.9.0-4 python3-more-itertools_4.2.0-3 python3-nose_1.3.7-7 python3-nose2_0.9.2-1 python3-numpy_1:1.19.4-1+b2 python3-packaging_20.4-1 python3-pandas_1.1.4+dfsg-1+rpi1 python3-pandas-lib_1.1.4+dfsg-1+rpi1 python3-pil_8.0.1-1+b1 python3-pkg-resources_50.3.0-1 python3-pluggy_0.13.0-5 python3-py_1.9.0-2 python3-pygments_2.7.1+dfsg-1 python3-pyparsing_2.4.7-1 python3-pytest_4.6.11-1 python3-pytest-cov_2.8.1-1 python3-requests_2.24.0+dfsg-1 python3-roman_2.0.0-5 python3-scipy_1.5.4-1 python3-setuptools_50.3.0-1 python3-six_1.15.0-2 python3-snowballstemmer_2.0.0-2 python3-sphinx_3.3.1-1 python3-tz_2020.4-2 python3-urllib3_1.25.11-1 python3-wcwidth_0.1.9+dfsg1-2 python3-zipp_1.0.0-3 python3.9_3.9.1~rc1-2+rpi1 python3.9-dev_3.9.1~rc1-2+rpi1 python3.9-minimal_3.9.1~rc1-2+rpi1 raspbian-archive-keyring_20120528.2 readline-common_8.1~rc3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-biom-format-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sgml-base_1.30 sphinx-common_3.3.1-1 sysvinit-utils_2.96-5 tar_1.32+dfsg-1+rpi1 ttf-bitstream-vera_1.10-8 tzdata_2020d-1 util-linux_2.36.1-2 xml-core_0.18+nmu1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.xs6oe3s9/trustedkeys.kbx': General error
gpgv: Signature made Sat Nov 21 12:48:22 2020 UTC
gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1
gpgv: issuer "npatra974@gmail.com"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./python-biom-format_2.1.10-1.dsc
dpkg-source: info: extracting python-biom-format in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking python-biom-format_2.1.10.orig.tar.xz
dpkg-source: info: unpacking python-biom-format_2.1.10-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying ignore_local_dist-packages.patch
dpkg-source: info: applying no-web-adds.patch
dpkg-source: info: applying fix_future_import.patch
dpkg-source: info: applying enable_sloppy_sphinx_build.patch
dpkg-source: info: applying sphinx_1.6.patch
dpkg-source: info: applying sphinx.ext.pngmath.patch
dpkg-source: info: applying posix_shell.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-01c41292-440d-4e2e-8cc3-d3c2f5537823
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package python-biom-format
dpkg-buildpackage: info: source version 2.1.10-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --with python3,bash-completion,sphinxdoc --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
install -d /<<PKGBUILDDIR>>/debian/.debhelper/generated/_source/home
pybuild --clean --test-pytest -i python{version} -p 3.9
I: pybuild base:232: python3.9 setup.py clean
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_filter.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_subsample.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_transform.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
Compiling biom/_filter.pyx because it changed.
Compiling biom/_transform.pyx because it changed.
Compiling biom/_subsample.pyx because it changed.
[1/3] Cythonizing biom/_filter.pyx
[2/3] Cythonizing biom/_subsample.pyx
[3/3] Cythonizing biom/_transform.pyx
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.9' does not exist -- can't clean it
rm -rf .pybuild/
find . -name \*.pyc -exec rm {} \;
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars ./biom/_filter.c ./biom/_subsample.c ./biom/_transform.c debian/files
rm -fr -- debian/python3-biom-format/ debian/tmp/ debian/python-biom-format-doc/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
debian/rules binary-arch
dh binary-arch --with python3,bash-completion,sphinxdoc --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
install -d /<<PKGBUILDDIR>>/debian/.debhelper/generated/_source/home
pybuild --configure --test-pytest -i python{version} -p 3.9
I: pybuild base:232: python3.9 setup.py config
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_filter.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_subsample.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_transform.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
Compiling biom/_filter.pyx because it changed.
Compiling biom/_transform.pyx because it changed.
Compiling biom/_subsample.pyx because it changed.
[1/3] Cythonizing biom/_filter.pyx
[2/3] Cythonizing biom/_subsample.pyx
[3/3] Cythonizing biom/_transform.pyx
running config
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# arch
USE_CYTHON=true dh_auto_build
pybuild --build --test-pytest -i python{version} -p 3.9
I: pybuild base:232: /usr/bin/python3 setup.py build
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom
copying biom/err.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom
copying biom/exception.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom
copying biom/parse.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom
copying biom/table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom
copying biom/util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom
copying biom/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
copying biom/cli/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
copying biom/cli/installation_informer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
copying biom/cli/metadata_adder.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
copying biom/cli/metadata_exporter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
copying biom/cli/table_converter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
copying biom/cli/table_head.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
copying biom/cli/table_ids.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
copying biom/cli/table_normalizer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
copying biom/cli/table_subsetter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
copying biom/cli/table_summarizer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
copying biom/cli/table_validator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
copying biom/cli/uc_processor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
copying biom/cli/util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests
copying biom/tests/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests
copying biom/tests/long_lines.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests
copying biom/tests/test_err.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests
copying biom/tests/test_parse.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests
copying biom/tests/test_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests
copying biom/tests/test_util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_add_metadata.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_show_install_info.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_subset_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_summarize_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_table_converter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_table_normalizer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_uc_processor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_validate_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data
running egg_info
creating biom_format.egg-info
writing biom_format.egg-info/PKG-INFO
writing dependency_links to biom_format.egg-info/dependency_links.txt
writing entry points to biom_format.egg-info/entry_points.txt
writing requirements to biom_format.egg-info/requires.txt
writing top-level names to biom_format.egg-info/top_level.txt
writing manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no directories found matching 'support_files'
warning: no directories found matching 'tests/test_data'
no previously-included directories found matching 'docs/_build'
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '.git' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
warning: no previously-included files matching '.*.swp' found anywhere in distribution
writing manifest file 'biom_format.egg-info/SOURCES.txt'
copying biom/_filter.pyx -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom
copying biom/_subsample.pyx -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom
copying biom/_transform.pyx -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/assets
copying biom/assets/exercise_api.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/assets
copying biom/assets/exercise_cli.sh -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/assets
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/test.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/test.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_data/bad_table.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/bad_table.txt.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/empty.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/no-contents.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.json.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data
running build_ext
building 'biom._filter' extension
creating build
creating build/temp.linux-armhf-3.9
creating build/temp.linux-armhf-3.9/biom
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c biom/_filter.c -o build/temp.linux-armhf-3.9/biom/_filter.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from biom/_filter.c:629:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/biom/_filter.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/_filter.cpython-39-arm-linux-gnueabihf.so
building 'biom._transform' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c biom/_transform.c -o build/temp.linux-armhf-3.9/biom/_transform.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from biom/_transform.c:629:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/biom/_transform.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/_transform.cpython-39-arm-linux-gnueabihf.so
building 'biom._subsample' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c biom/_subsample.c -o build/temp.linux-armhf-3.9/biom/_subsample.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from biom/_subsample.c:629:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/biom/_subsample.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/_subsample.cpython-39-arm-linux-gnueabihf.so
# indep:
PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b html doc build/html
Running Sphinx v3.3.1
making output directory... done
/<<PKGBUILDDIR>>/doc/conf.py:238: RemovedInSphinx40Warning: The app.add_javascript() is deprecated. Please use app.add_js_file() instead.
app.add_javascript('copybutton.js')
[autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst
Failed to import 'biom': no module named biom
Failed to import 'biom.table': no module named biom.table
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 12 source files that are out of date
updating environment: [new config] 12 added, 0 changed, 0 removed
reading sources... [ 8%] BIOM_LICENSE
reading sources... [ 16%] documentation/adding_metadata
reading sources... [ 25%] documentation/biom_conversion
reading sources... [ 33%] documentation/biom_format
reading sources... [ 41%] documentation/format_versions/biom-1.0
reading sources... [ 50%] documentation/format_versions/biom-2.0
reading sources... [ 58%] documentation/format_versions/biom-2.1
reading sources... [ 66%] documentation/index
reading sources... [ 75%] documentation/quick_usage_examples
reading sources... [ 83%] documentation/summarizing_biom_tables
reading sources... [ 91%] documentation/table_objects
reading sources... [100%] index
WARNING: autodoc: failed to import module 'biom'; the following exception was raised:
No module named 'biom._filter'
WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised:
No module named 'biom._filter'
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
writing output... [ 8%] BIOM_LICENSE
writing output... [ 16%] documentation/adding_metadata
writing output... [ 25%] documentation/biom_conversion
writing output... [ 33%] documentation/biom_format
writing output... [ 41%] documentation/format_versions/biom-1.0
writing output... [ 50%] documentation/format_versions/biom-2.0
writing output... [ 58%] documentation/format_versions/biom-2.1
writing output... [ 66%] documentation/index
writing output... [ 75%] documentation/quick_usage_examples
writing output... [ 83%] documentation/summarizing_biom_tables
writing output... [ 91%] documentation/table_objects
writing output... [100%] index
/<<PKGBUILDDIR>>/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated
/<<PKGBUILDDIR>>/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated
/<<PKGBUILDDIR>>/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated
/<<PKGBUILDDIR>>/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated
generating indices... done
writing additional pages... search done
copying images... [100%] _static/biom-format.png
copying static files... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 6 warnings.
The HTML pages are in build/html.
PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b man doc build/man
Running Sphinx v3.3.1
making output directory... done
/<<PKGBUILDDIR>>/doc/conf.py:238: RemovedInSphinx40Warning: The app.add_javascript() is deprecated. Please use app.add_js_file() instead.
app.add_javascript('copybutton.js')
[autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst
Failed to import 'biom': no module named biom
Failed to import 'biom.table': no module named biom.table
building [mo]: targets for 0 po files that are out of date
building [man]: all manpages
updating environment: [new config] 12 added, 0 changed, 0 removed
reading sources... [ 8%] BIOM_LICENSE
reading sources... [ 16%] documentation/adding_metadata
reading sources... [ 25%] documentation/biom_conversion
reading sources... [ 33%] documentation/biom_format
reading sources... [ 41%] documentation/format_versions/biom-1.0
reading sources... [ 50%] documentation/format_versions/biom-2.0
reading sources... [ 58%] documentation/format_versions/biom-2.1
reading sources... [ 66%] documentation/index
reading sources... [ 75%] documentation/quick_usage_examples
reading sources... [ 83%] documentation/summarizing_biom_tables
reading sources... [ 91%] documentation/table_objects
reading sources... [100%] index
WARNING: autodoc: failed to import module 'biom'; the following exception was raised:
No module named 'biom._filter'
WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised:
No module named 'biom._filter'
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
writing... biom.1 { documentation/index documentation/biom_format documentation/format_versions/biom-1.0 documentation/format_versions/biom-2.0 documentation/format_versions/biom-2.1 documentation/quick_usage_examples documentation/table_objects documentation/biom_conversion documentation/adding_metadata documentation/summarizing_biom_tables BIOM_LICENSE } done
build succeeded, 2 warnings.
The manual pages are in build/man.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a -O--buildsystem=pybuild
pybuild --test --test-pytest -i python{version} -p 3.9
I: pybuild pybuild:284: cp -r /<<PKGBUILDDIR>>/examples /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build
I: pybuild base:232: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build; python3.9 -m pytest
============================= test session starts ==============================
platform linux -- Python 3.9.1rc1, pytest-4.6.11, py-1.9.0, pluggy-0.13.0
rootdir: /<<PKGBUILDDIR>>, inifile: pytest.ini
plugins: cov-2.8.1
collected 356 items
biom/tests/test_err.py ..................... [ 5%]
biom/tests/test_parse.py ......................... [ 12%]
biom/tests/test_table.py ............................................... [ 26%]
....................................................................sss. [ 46%]
........................................................................ [ 66%]
..................................................... [ 81%]
biom/tests/test_util.py ..s................ [ 86%]
biom/tests/test_cli/test_add_metadata.py .... [ 87%]
biom/tests/test_cli/test_show_install_info.py . [ 88%]
biom/tests/test_cli/test_subset_table.py ..... [ 89%]
biom/tests/test_cli/test_summarize_table.py .. [ 90%]
biom/tests/test_cli/test_table_converter.py ...... [ 91%]
biom/tests/test_cli/test_table_normalizer.py . [ 92%]
biom/tests/test_cli/test_uc_processor.py ...... [ 93%]
biom/tests/test_cli/test_validate_table.py ...................... [100%]
=============================== warnings summary ===============================
biom/table.py:185
biom/table.py:185
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/table.py:185: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated since Python 3.3, and in 3.10 it will stop working
from collections import defaultdict, Hashable, Iterable
biom/tests/test_table.py:20
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_table.py:20: FutureWarning: pandas.util.testing is deprecated. Use the functions in the public API at pandas.testing instead.
import pandas.util.testing as pdt
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_table.py::SupportTests::test_remove_empty_both
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_table.py::SupportTests::test_remove_empty_obs
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_table.py::SupportTests::test_remove_empty_sample
/usr/lib/python3/dist-packages/scipy/sparse/_index.py:125: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
self._set_arrayXarray(i, j, x)
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_table.py::TableTests::test_from_hdf5_observation_subset
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_table.py::TableTests::test_from_hdf5_sample_subset
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_subset_table.py::TestSubsetTable::test_subset_observations_hdf5
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_subset_table.py::TestSubsetTable::test_subset_samples_hdf5
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/table.py:4077: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
data = np.hstack(h5_data[start:end]
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_table.py::TableTests::test_from_hdf5_observation_subset
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_table.py::TableTests::test_from_hdf5_sample_subset
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_subset_table.py::TestSubsetTable::test_subset_observations_hdf5
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_subset_table.py::TestSubsetTable::test_subset_samples_hdf5
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/table.py:4079: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
indices = np.hstack(h5_indices[start:end]
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_table.py::TableTests::test_nnz_issue_727
/usr/lib/python3/dist-packages/scipy/sparse/_index.py:82: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
self._set_intXint(row, col, x.flat[0])
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_summarizer.py:89: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
lines.append('Num samples: ' + locale.format('%d', num_samples,
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_summarizer.py:91: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
lines.append('Num observations: ' + locale.format('%d',
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_summarizer.py:96: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
lines.append('Total count: ' + locale.format('%d', total_count,
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_summarizer.py:111: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
lines.append(' Min: ' + locale.format('%1.3f', min_counts, grouping=True))
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_summarizer.py:112: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
lines.append(' Max: ' + locale.format('%1.3f', max_counts, grouping=True))
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_summarizer.py:113: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
lines.append(' Median: ' + locale.format('%1.3f', median_counts,
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_summarizer.py:115: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
lines.append(' Mean: ' + locale.format('%1.3f', mean_counts,
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_summarizer.py:117: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
lines.append(' Std. dev.: ' + locale.format('%1.3f',
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_summarizer.py:144: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
lines.append('%s: ' % k + locale.format('%1.3f', v, grouping=True))
-- Docs: https://docs.pytest.org/en/latest/warnings.html
--------- coverage: platform linux, python 3.9.1-candidate-1 ---------
Name Stmts Miss Cover
----------------------------------------------------------------------------------------------------------------------------------------------------------
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/__init__.py 16 0 100%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__init__.py 24 4 83%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/installation_informer.py 58 11 81%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/metadata_adder.py 79 29 63%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/metadata_exporter.py 19 10 47%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_converter.py 85 19 78%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_head.py 15 5 67%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_ids.py 10 3 70%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_normalizer.py 25 5 80%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_subsetter.py 74 19 74%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_summarizer.py 68 15 78%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_validator.py 319 63 80%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/uc_processor.py 37 7 81%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/util.py 18 5 72%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/err.py 122 1 99%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/exception.py 26 0 100%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/parse.py 306 66 78%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/table.py 1622 138 91%
__init__.py 0 0 100%
long_lines.py 8 0 100%
test_cli/__init__.py 0 0 100%
test_cli/test_add_metadata.py 40 1 98%
test_cli/test_show_install_info.py 8 1 88%
test_cli/test_subset_table.py 59 1 98%
test_cli/test_summarize_table.py 21 1 95%
test_cli/test_table_converter.py 80 1 99%
test_cli/test_table_normalizer.py 22 1 95%
test_cli/test_uc_processor.py 38 1 97%
test_cli/test_validate_table.py 306 1 99%
test_data/__init__.py 0 0 100%
test_err.py 162 4 98%
test_parse.py 228 1 99%
test_table.py 2422 24 99%
test_util.py 144 6 96%
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/util.py 184 30 84%
----------------------------------------------------------------------------------------------------------------------------------------------------------
TOTAL 6645 473 93%
============= 352 passed, 4 skipped, 48 warnings in 111.98 seconds =============
rm -fr -- /tmp/dh-xdg-rundir-y6yB17Hu
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
rm -f -- debian/python3-biom-format.substvars
rm -fr -- debian/.debhelper/generated/python3-biom-format/ debian/python3-biom-format/ debian/tmp/
rm -f debian/python3-biom-format.debhelper.log
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install
install -d /<<PKGBUILDDIR>>/debian/tmp
pybuild --install --test-pytest -i python{version} -p 3.9 --dest-dir /<<PKGBUILDDIR>>/debian/tmp
I: pybuild base:232: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-biom-format
running install
running build
running build_py
running egg_info
writing biom_format.egg-info/PKG-INFO
writing dependency_links to biom_format.egg-info/dependency_links.txt
writing entry points to biom_format.egg-info/entry_points.txt
writing requirements to biom_format.egg-info/requires.txt
writing top-level names to biom_format.egg-info/top_level.txt
reading manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no directories found matching 'support_files'
warning: no directories found matching 'tests/test_data'
no previously-included directories found matching 'docs/_build'
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '.git' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
warning: no previously-included files matching '.*.swp' found anywhere in distribution
writing manifest file 'biom_format.egg-info/SOURCES.txt'
running build_ext
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-biom-format
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/err.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/exception.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/parse.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/table.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/util.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/installation_informer.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/metadata_adder.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/metadata_exporter.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_converter.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_head.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_ids.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_normalizer.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_subsetter.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_summarizer.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/table_validator.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/uc_processor.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/util.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__pycache__/__init__.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__pycache__/table_summarizer.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__pycache__/metadata_adder.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__pycache__/util.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__pycache__/metadata_exporter.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__pycache__/table_converter.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__pycache__/installation_informer.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__pycache__/table_subsetter.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__pycache__/table_normalizer.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__pycache__/table_head.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__pycache__/table_ids.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__pycache__/table_validator.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/cli/__pycache__/uc_processor.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/long_lines.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_err.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_parse.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_table.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_util.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_add_metadata.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_show_install_info.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_subset_table.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_summarize_table.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_table_converter.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_table_normalizer.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_uc_processor.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_validate_table.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_data/test.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/test_data/test.json -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/test_data
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/__pycache__/__init__.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/__pycache__/test_add_metadata.cpython-39-PYTEST.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/__pycache__/test_show_install_info.cpython-39-PYTEST.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/__pycache__/test_subset_table.cpython-39-PYTEST.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/__pycache__/test_summarize_table.cpython-39-PYTEST.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/__pycache__/test_table_converter.cpython-39-PYTEST.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/__pycache__/test_table_normalizer.cpython-39-PYTEST.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/__pycache__/test_uc_processor.cpython-39-PYTEST.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_cli/__pycache__/test_validate_table.cpython-39-PYTEST.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data/bad_table.txt -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data/bad_table.txt.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data/empty.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data/no-contents.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data/test.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data/test.json -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/test_data/test.json.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_data
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/bench_tables
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/__pycache__/__init__.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/__pycache__/test_err.cpython-39-PYTEST.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/__pycache__/test_parse.cpython-39-PYTEST.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/__pycache__/long_lines.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/__pycache__/test_table.cpython-39-PYTEST.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/tests/__pycache__/test_util.cpython-39-PYTEST.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/_filter.pyx -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/_subsample.pyx -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/_transform.pyx -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/assets
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/assets/exercise_api.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/assets
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/assets/exercise_cli.sh -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/assets
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/_filter.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/_transform.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/_subsample.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/__pycache__/__init__.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/__pycache__/table.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/__pycache__/exception.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/__pycache__/util.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/__pycache__/err.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/biom/__pycache__/parse.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/examples
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/examples/min_sparse_otu_table.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/examples
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/examples
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/examples/obs_md.txt -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/examples
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/examples/rich_sparse_otu_table.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/examples
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/examples
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/examples/sam_md.txt -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/examples
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_biom-format/build/.coverage -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/err.py to err.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/exception.py to exception.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/parse.py to parse.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/table.py to table.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/util.py to util.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/__init__.py to __init__.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/__init__.py to __init__.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/installation_informer.py to installation_informer.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/metadata_adder.py to metadata_adder.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/metadata_exporter.py to metadata_exporter.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/table_converter.py to table_converter.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/table_head.py to table_head.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/table_ids.py to table_ids.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/table_normalizer.py to table_normalizer.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/table_subsetter.py to table_subsetter.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/table_summarizer.py to table_summarizer.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/table_validator.py to table_validator.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/uc_processor.py to uc_processor.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/cli/util.py to util.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/__init__.py to __init__.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/long_lines.py to long_lines.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_err.py to test_err.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_parse.py to test_parse.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_table.py to test_table.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_util.py to test_util.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/__init__.py to __init__.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/test_add_metadata.py to test_add_metadata.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/test_show_install_info.py to test_show_install_info.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/test_subset_table.py to test_subset_table.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/test_summarize_table.py to test_summarize_table.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/test_table_converter.py to test_table_converter.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/test_table_normalizer.py to test_table_normalizer.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/test_uc_processor.py to test_uc_processor.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_cli/test_validate_table.py to test_validate_table.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/tests/test_data/__init__.py to __init__.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom/assets/exercise_api.py to exercise_api.cpython-39.pyc
running install_egg_info
Copying biom_format.egg-info to /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.9/dist-packages/biom_format-2.1.10.egg-info
Skipping SOURCES.txt
running install_scripts
Installing biom script to /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/bin
I: pybuild pybuild:310: dh_numpy3
(grep -a -s -v python3:Depends debian/python3-biom-format.substvars; echo "python3:Depends=python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9") > debian/python3-biom-format.substvars.new
mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars
find debian/python3-biom-format -name .coverage -delete
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a -O--buildsystem=pybuild
install -d debian/python3-biom-format/usr/share/doc/python3-biom-format
install -d debian/.debhelper/generated/python3-biom-format
cp --reflink=auto -a ./debian/README.test debian/python3-biom-format/usr/share/doc/python3-biom-format
cp --reflink=auto -a ./debian/tests/run-unit-test debian/python3-biom-format/usr/share/doc/python3-biom-format
chmod -R u\+rw,go=rX debian/python3-biom-format/usr/share/doc
install -p -m0644 debian/copyright debian/python3-biom-format/usr/share/doc/python3-biom-format/copyright
install -d debian/.debhelper/generated/python-biom-format-doc
dh_sphinxdoc -a -O--buildsystem=pybuild
dh_sphinxdoc: warning: Sphinx documentation not found
dh_installchangelogs -a -O--buildsystem=pybuild
install -p -m0644 debian/changelog debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog.Debian
install -p -m0644 ./ChangeLog.md debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog
rm -f debian/python3-biom-format.debhelper.log
debian/rules override_dh_installexamples
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_installexamples
install -d debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
cp --reflink=auto -a ./examples/min_sparse_otu_table.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
cp --reflink=auto -a ./examples/min_sparse_otu_table_hdf5.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
cp --reflink=auto -a ./examples/obs_md.txt debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
cp --reflink=auto -a ./examples/rich_sparse_otu_table.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
cp --reflink=auto -a ./examples/rich_sparse_otu_table_hdf5.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
cp --reflink=auto -a ./examples/sam_md.txt debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
find debian -name "*.c" -delete
find debian -name "*.pyx" -delete
# move tests from Python3 package to examples package
if [ ! -d biom/tests ] ; then \
mv `find debian/python*biom-format -name tests -type d` biom ; \
else \
find debian/python*biom-format -name tests -type d | xargs rm -rf ; \
fi
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installman -a -O--buildsystem=pybuild
install -d debian/python3-biom-format/usr/share/man/man1/
install -p -m0644 ./debian/biom.1 debian/python3-biom-format/usr/share/man/man1/biom.1
man-recode --to-code UTF-8 --suffix .dh-new debian/python3-biom-format/usr/share/man/man1/biom.1
mv debian/python3-biom-format/usr/share/man/man1/biom.1.dh-new debian/python3-biom-format/usr/share/man/man1/biom.1
chmod 0644 -- debian/python3-biom-format/usr/share/man/man1/biom.1
dh_python3 -a -O--buildsystem=pybuild
D: dh_python3 dh_python3:161: version: 4.20201102
D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-a', '-O--buildsystem=pybuild']
D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': True, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'}
D: dh_python3 dh_python3:164: args: []
D: dh_python3 dh_python3:165: supported Python versions: 3.9 (default=3.9)
D: dh_python3 debhelper:107: skipping package: python-biom-format-doc
D: dh_python3 debhelper:152: source=python-biom-format, binary packages=['python3-biom-format']
D: dh_python3 dh_python3:183: processing package python3-biom-format...
D: dh_python3 fs:49: moving files from debian/python3-biom-format/usr/lib/python3.9/dist-packages to debian/python3-biom-format/usr/lib/python3/dist-packages/
D: dh_python3 fs:260: package python3-biom-format details = {'requires.txt': {'debian/python3-biom-format/usr/lib/python3/dist-packages/biom_format-2.1.10.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.9')}, 'ext_no_version': set()}
D: dh_python3 depends:117: generating dependencies for package python3-biom-format
D: dh_python3 pydist:142: trying to find dependency for click (python=None)
D: dh_python3 pydist:142: trying to find dependency for cython (python=None)
D: dh_python3 pydist:142: trying to find dependency for cython>=0.29 (python=None)
D: dh_python3 pydist:142: trying to find dependency for future>=0.16.0 (python=None)
D: dh_python3 pydist:142: trying to find dependency for h5py (python=None)
D: dh_python3 pydist:142: trying to find dependency for numpy>=1.9.2 (python=None)
D: dh_python3 pydist:142: trying to find dependency for pandas>=0.20.0 (python=None)
D: dh_python3 pydist:142: trying to find dependency for scipy>=1.3.1 (python=None)
D: dh_python3 pydist:142: trying to find dependency for six>=1.10.0 (python=None)
D: dh_python3 depends:275: D={'cython3', 'python3 (<< 3.10)', 'python3:any', 'python3-numpy', 'python3-scipy', 'python3-h5py-serial', 'python3 (>= 3.9~)', 'python3-pandas', 'python3-six (>= 1.10.0)', 'python3-future', 'python3-click'}; R=[]; S=[]; E=[], B=[]; RT=[]
dh_installsystemduser -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
cd debian/python3-biom-format
chmod a-x usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian usr/share/man/man1/biom.1
gzip -9nf usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian usr/share/man/man1/biom.1
cd '/<<PKGBUILDDIR>>'
rm -f debian/python3-biom-format.debhelper.log
debian/rules override_dh_fixperms
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_fixperms
find debian/python3-biom-format ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/python3-biom-format/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biom-format/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biom-format/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/python3-biom-format/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biom-format -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biom-format/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
find debian/python3-biom-format/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
find debian -name exercise_cli.sh -exec chmod +x \{\} \;
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -a -O--buildsystem=pybuild
install -d debian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf
dwz -mdebian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug -M/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug -- debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-39-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-39-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-39-arm-linux-gnueabihf.so
objcopy --compress-debug-sections debian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug
dh_strip -a -a -O--buildsystem=pybuild
install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/b2
objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-39-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/b2/64ed4a0620f0d8657384d71cb7d2839ee41ed8.debug
chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/b2/64ed4a0620f0d8657384d71cb7d2839ee41ed8.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-39-arm-linux-gnueabihf.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/b2/64ed4a0620f0d8657384d71cb7d2839ee41ed8.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-39-arm-linux-gnueabihf.so
install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/a1
objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-39-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/a1/247d1bb7f7aaaed94b92394f9ee70226e3b980.debug
chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/a1/247d1bb7f7aaaed94b92394f9ee70226e3b980.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-39-arm-linux-gnueabihf.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/a1/247d1bb7f7aaaed94b92394f9ee70226e3b980.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-39-arm-linux-gnueabihf.so
install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/35
objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-39-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/35/34ad041405c64fea078a41252ed64bc36411ce.debug
chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/35/34ad041405c64fea078a41252ed64bc36411ce.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-39-arm-linux-gnueabihf.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/35/34ad041405c64fea078a41252ed64bc36411ce.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-39-arm-linux-gnueabihf.so
install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz
cp --reflink=auto -a debian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz
rm -fr debian/python3-biom-format/usr/lib/debug/.dwz
rmdir -p --ignore-fail-on-non-empty debian/python3-biom-format/usr/lib/debug
install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc
ln -s python3-biom-format debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc/python3-biom-format-dbgsym
dh_makeshlibs -a -a -O--buildsystem=pybuild
rm -f debian/python3-biom-format/DEBIAN/shlibs
dh_shlibdeps -a -a -O--buildsystem=pybuild
install -d debian/python3-biom-format/DEBIAN
dpkg-shlibdeps -Tdebian/python3-biom-format.substvars debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-39-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-39-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-39-arm-linux-gnueabihf.so
dh_installdeb -a -O--buildsystem=pybuild
printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/postinst
cat debian/python3-biom-format.postinst.debhelper >> debian/python3-biom-format/DEBIAN/postinst
chmod 0755 -- debian/python3-biom-format/DEBIAN/postinst
printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/prerm
cat debian/python3-biom-format.prerm.debhelper >> debian/python3-biom-format/DEBIAN/prerm
chmod 0755 -- debian/python3-biom-format/DEBIAN/prerm
dh_gencontrol -a -O--buildsystem=pybuild
echo misc:Depends= >> debian/python3-biom-format.substvars
echo misc:Pre-Depends= >> debian/python3-biom-format.substvars
install -d debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN
dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/.debhelper/python3-biom-format/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=python3-biom-format-dbgsym "-DDepends=python3-biom-format (= \${binary:Version})" "-DDescription=debug symbols for python3-biom-format" "-DBuild-Ids=3534ad041405c64fea078a41252ed64bc36411ce a1247d1bb7f7aaaed94b92394f9ee70226e3b980 b264ed4a0620f0d8657384d71cb7d2839ee41ed8" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Versions} unused, but is defined
chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control
dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/python3-biom-format
dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Versions} unused, but is defined
chmod 0644 -- debian/python3-biom-format/DEBIAN/control
dh_md5sums -a -O--buildsystem=pybuild
cd debian/python3-biom-format >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/python3-biom-format/DEBIAN/md5sums
cd debian/.debhelper/python3-biom-format/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/md5sums
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb --root-owner-group --build debian/python3-biom-format ..
dpkg-deb --root-owner-group --build debian/.debhelper/python3-biom-format/dbgsym-root ..
dpkg-deb: building package 'python3-biom-format-dbgsym' in '../python3-biom-format-dbgsym_2.1.10-1_armhf.deb'.
dpkg-deb: building package 'python3-biom-format' in '../python3-biom-format_2.1.10-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../python-biom-format_2.1.10-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-12-11T08:15:20Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
python-biom-format_2.1.10-1_armhf.changes:
------------------------------------------
Format: 1.8
Date: Sat, 21 Nov 2020 18:07:53 +0530
Source: python-biom-format
Binary: python3-biom-format python3-biom-format-dbgsym
Architecture: armhf
Version: 2.1.10-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Nilesh Patra <npatra974@gmail.com>
Description:
python3-biom-format - Biological Observation Matrix (BIOM) format (Python 3)
Changes:
python-biom-format (2.1.10-1) unstable; urgency=medium
.
* Team upload.
* New upstream version
Checksums-Sha1:
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9aafe80d4845481a0c2a0467b0c923a6737d0f1b 223212 python3-biom-format-dbgsym_2.1.10-1_armhf.deb
cee30d91e0f32a8cbd92c55095b5b395147a939c 123680 python3-biom-format_2.1.10-1_armhf.deb
Checksums-Sha256:
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e86517786b386501f77619ddafb560698b7e31280c65ca2104b5edb2249d87d6 223212 python3-biom-format-dbgsym_2.1.10-1_armhf.deb
cdee6d17e14627b1f5d3c41405f40eb53f497b3b4d7094264bdc9def1a4419c4 123680 python3-biom-format_2.1.10-1_armhf.deb
Files:
e50a4f26b1e5861b081b7ab06fdec804 9059 python optional python-biom-format_2.1.10-1_armhf.buildinfo
67dc0a8d8c09c54bc22764962ff3f5ad 223212 debug optional python3-biom-format-dbgsym_2.1.10-1_armhf.deb
df421b436b16a92f4bc4431190b8855a 123680 python optional python3-biom-format_2.1.10-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
python3-biom-format-dbgsym_2.1.10-1_armhf.deb
---------------------------------------------
new Debian package, version 2.0.
size 223212 bytes: control archive=708 bytes.
501 bytes, 12 lines control
417 bytes, 4 lines md5sums
Package: python3-biom-format-dbgsym
Source: python-biom-format
Version: 2.1.10-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 268
Depends: python3-biom-format (= 2.1.10-1)
Section: debug
Priority: optional
Description: debug symbols for python3-biom-format
Build-Ids: 3534ad041405c64fea078a41252ed64bc36411ce a1247d1bb7f7aaaed94b92394f9ee70226e3b980 b264ed4a0620f0d8657384d71cb7d2839ee41ed8
drwxr-xr-x root/root 0 2020-11-21 12:37 ./
drwxr-xr-x root/root 0 2020-11-21 12:37 ./usr/
drwxr-xr-x root/root 0 2020-11-21 12:37 ./usr/lib/
drwxr-xr-x root/root 0 2020-11-21 12:37 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-11-21 12:37 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-11-21 12:37 ./usr/lib/debug/.build-id/35/
-rw-r--r-- root/root 49532 2020-11-21 12:37 ./usr/lib/debug/.build-id/35/34ad041405c64fea078a41252ed64bc36411ce.debug
drwxr-xr-x root/root 0 2020-11-21 12:37 ./usr/lib/debug/.build-id/a1/
-rw-r--r-- root/root 80556 2020-11-21 12:37 ./usr/lib/debug/.build-id/a1/247d1bb7f7aaaed94b92394f9ee70226e3b980.debug
drwxr-xr-x root/root 0 2020-11-21 12:37 ./usr/lib/debug/.build-id/b2/
-rw-r--r-- root/root 116712 2020-11-21 12:37 ./usr/lib/debug/.build-id/b2/64ed4a0620f0d8657384d71cb7d2839ee41ed8.debug
drwxr-xr-x root/root 0 2020-11-21 12:37 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2020-11-21 12:37 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root 11928 2020-11-21 12:37 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug
drwxr-xr-x root/root 0 2020-11-21 12:37 ./usr/share/
drwxr-xr-x root/root 0 2020-11-21 12:37 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-11-21 12:37 ./usr/share/doc/python3-biom-format-dbgsym -> python3-biom-format
python3-biom-format_2.1.10-1_armhf.deb
--------------------------------------
new Debian package, version 2.0.
size 123680 bytes: control archive=2788 bytes.
1996 bytes, 36 lines control
4397 bytes, 48 lines md5sums
263 bytes, 12 lines * postinst #!/bin/sh
412 bytes, 12 lines * prerm #!/bin/sh
Package: python3-biom-format
Source: python-biom-format
Version: 2.1.10-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 703
Depends: python3-h5py, python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9, cython3, python3 (<< 3.10), python3 (>= 3.9~), python3-click, python3-future, python3-h5py-serial, python3-pandas, python3-scipy, python3-six (>= 1.10.0), python3:any, libc6 (>= 2.4)
Suggests: python-biom-format-doc
Breaks: biom-format-tools (<< 2.1.7+dfsg-3)
Replaces: biom-format-tools (<< 2.1.7+dfsg-3)
Provides: biom-format-tools
Section: python
Priority: optional
Homepage: https://biom-format.org/
Description: Biological Observation Matrix (BIOM) format (Python 3)
The BIOM file format (canonically pronounced biome) is designed to be a
general-use format for representing biological sample by observation
contingency tables. BIOM is a recognized standard for the Earth
Microbiome Project and is a Genomics Standards Consortium candidate
project.
.
The BIOM format is designed for general use in broad areas of
comparative -omics. For example, in marker-gene surveys, the primary use
of this format is to represent OTU tables: the observations in this case
are OTUs and the matrix contains counts corresponding to the number of
times each OTU is observed in each sample. With respect to metagenome
data, this format would be used to represent metagenome tables: the
observations in this case might correspond to SEED subsystems, and the
matrix would contain counts corresponding to the number of times each
subsystem is observed in each metagenome. Similarly, with respect to
genome data, this format may be used to represent a set of genomes: the
observations in this case again might correspond to SEED subsystems, and
the counts would correspond to the number of times each subsystem is
observed in each genome.
.
This package provides the BIOM format library for the Python 3 interpreter.
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Build Architecture: armhf
Build-Space: 109968
Build-Time: 308
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 1555
Job: python-biom-format_2.1.10-1
Machine Architecture: armhf
Package: python-biom-format
Package-Time: 1922
Source-Version: 2.1.10-1
Space: 109968
Status: successful
Version: 2.1.10-1
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Finished at 2020-12-11T08:15:20Z
Build needed 00:32:02, 109968k disc space