Raspbian Package Auto-Building

pymol → 2.2.0+dfsg-1.1 → armhf → 2018-12-09 11:33:23

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-01

+==============================================================================+
| pymol 2.2.0+dfsg-1.1 (armhf)                 Sun, 09 Dec 2018 10:41:14 +0000 |
+==============================================================================+

Package: pymol
Version: 2.2.0+dfsg-1.1
Source Version: 2.2.0+dfsg-1.1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/buster-staging-armhf-sbuild-fb71e114-7c1b-4f6e-9518-ac171c370896' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.3 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [13.0 MB]
Fetched 24.3 MB in 27s (907 kB/s)
Reading package lists...

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'pymol' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/debichem-team/pymol.git
Please use:
git clone https://salsa.debian.org/debichem-team/pymol.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 10.3 MB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main pymol 2.2.0+dfsg-1.1 (dsc) [2186 B]
Get:2 http://172.17.0.1/private buster-staging/main pymol 2.2.0+dfsg-1.1 (tar) [10.2 MB]
Get:3 http://172.17.0.1/private buster-staging/main pymol 2.2.0+dfsg-1.1 (diff) [56.4 kB]
Fetched 10.3 MB in 1s (9965 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/pymol-nUzBFo/pymol-2.2.0+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/pymol-nUzBFo' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-ecaVzj/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-ecaVzj/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-ecaVzj/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2920 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-ecaVzj/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  ca-certificates e2fsprogs-l10n krb5-locales libgpg-error-l10n
  libsasl2-modules libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 4 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (18.2 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15624 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper (>= 11~), dh-python, freeglut3-dev, libfreetype6-dev, libglew1.5-dev, libglm-dev, libpng-dev, python, python-dev, python-numpy, texlive-latex-base, tk-dev, libxml2-dev
Filtered Build-Depends: debhelper (>= 11~), dh-python, freeglut3-dev, libfreetype6-dev, libglew1.5-dev, libglm-dev, libpng-dev, python, python-dev, python-numpy, texlive-latex-base, tk-dev, libxml2-dev
dpkg-deb: building package 'sbuild-build-depends-pymol-dummy' in '/<<BUILDDIR>>/resolver-ecaVzj/apt_archive/sbuild-build-depends-pymol-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-pymol-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ Sources [567 B]
Get:5 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ Packages [648 B]
Fetched 2548 B in 1s (3771 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-ecaVzj/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...

Install pymol build dependencies (apt-based resolver)
-----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  ca-certificates e2fsprogs-l10n krb5-locales libgpg-error-l10n
  libsasl2-modules openssl
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dwz file fontconfig-config
  fonts-dejavu-core fonts-lmodern freeglut3 freeglut3-dev gettext gettext-base
  groff-base icu-devtools intltool-debian libarchive-zip-perl libavahi-client3
  libavahi-common-data libavahi-common3 libblas3 libbrotli1 libbsd0 libcairo2
  libcroco3 libcups2 libcupsimage2 libdrm-amdgpu1 libdrm-dev libdrm-etnaviv1
  libdrm-exynos1 libdrm-freedreno1 libdrm-nouveau2 libdrm-omap1 libdrm-radeon1
  libdrm-tegra0 libedit2 libegl-mesa0 libegl1 libelf1 libexpat1 libexpat1-dev
  libfile-stripnondeterminism-perl libfontconfig1 libfontconfig1-dev
  libfreetype6 libfreetype6-dev libgbm1 libgfortran5 libgl1 libgl1-mesa-dev
  libgl1-mesa-dri libgl1-mesa-glx libglapi-mesa libgles1 libgles2 libglew-dev
  libglew2.1 libglib2.0-0 libglm-dev libglu1-mesa libglu1-mesa-dev
  libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0 libglx0 libgraphite2-3
  libgs9 libgs9-common libharfbuzz-icu0 libharfbuzz0b libice-dev libice6
  libicu-dev libicu63 libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo
  libkpathsea6 liblapack3 liblcms2-2 libllvm7 libmagic-mgc libmagic1 libmpdec2
  libopengl0 libopenjp2-7 libpaper-utils libpaper1 libpipeline1 libpixman-1-0
  libpng-dev libpotrace0 libptexenc1 libpthread-stubs0-dev libpython-dev
  libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
  libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib
  libpython3.6-minimal libpython3.6-stdlib libsensors4 libsigsegv2 libsm-dev
  libsm6 libsynctex2 libtcl8.6 libteckit0 libtexlua52 libtexlua53
  libtexluajit2 libtiff5 libtk8.6 libtool libwayland-client0
  libwayland-server0 libwebp6 libwoff1 libx11-6 libx11-data libx11-dev
  libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxaw7 libxcb-dri2-0
  libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev
  libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev
  libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev
  libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-xfixes0 libxcb-xfixes0-dev
  libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6
  libxext-dev libxext6 libxfixes-dev libxfixes3 libxft-dev libxft2 libxi6
  libxml2 libxml2-dev libxmu6 libxpm4 libxrender-dev libxrender1
  libxshmfence-dev libxshmfence1 libxss-dev libxss1 libxt-dev libxt6
  libxxf86vm-dev libxxf86vm1 libxxhash0 libzzip-0-13 m4 man-db mesa-common-dev
  mime-support pkg-config po-debconf poppler-data python python-dev
  python-minimal python-numpy python2 python2-dev python2-minimal python2.7
  python2.7-dev python2.7-minimal python3 python3-distutils python3-lib2to3
  python3-minimal python3.6 python3.6-minimal t1utils tcl tcl-dev tcl8.6
  tcl8.6-dev tex-common texlive-base texlive-binaries texlive-latex-base tk
  tk-dev tk8.6 tk8.6-dev ucf uuid-dev x11-common x11proto-core-dev
  x11proto-damage-dev x11proto-dev x11proto-fixes-dev x11proto-scrnsaver-dev
  x11proto-xext-dev x11proto-xf86vidmode-dev xdg-utils xorg-sgml-doctools
  xtrans-dev zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
  cups-common glew-utils libice-doc icu-doc liblcms2-utils lm-sensors
  libsm-doc libtool-doc gfortran | fortran95-compiler gcj-jdk libx11-doc
  libxcb-doc libxext-doc libxt-doc m4-doc apparmor less www-browser
  libmail-box-perl poppler-utils ghostscript fonts-japanese-mincho
  | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic
  fonts-arphic-ukai fonts-arphic-uming fonts-nanum python-doc python-tk
  gfortran python-nose python-numpy-dbg python-numpy-doc python2-doc
  python2.7-doc binfmt-support python3-doc python3-tk python3-venv
  python3.6-venv python3.6-doc tcl-doc tcl-tclreadline tcl8.6-doc gv
  | postscript-viewer perl-tk xpdf-reader | pdf-viewer texlive-latex-base-doc
  tk-doc tk8.6-doc
Recommended packages:
  curl | wget | lynx libcupsfilters1 libarchive-cpio-perl freetype2-doc
  libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback
  libpng-tools libltdl-dev libmail-sendmail-perl lmodern xterm
  | x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
  libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dwz file fontconfig-config
  fonts-dejavu-core fonts-lmodern freeglut3 freeglut3-dev gettext gettext-base
  groff-base icu-devtools intltool-debian libarchive-zip-perl libavahi-client3
  libavahi-common-data libavahi-common3 libblas3 libbrotli1 libbsd0 libcairo2
  libcroco3 libcups2 libcupsimage2 libdrm-amdgpu1 libdrm-dev libdrm-etnaviv1
  libdrm-exynos1 libdrm-freedreno1 libdrm-nouveau2 libdrm-omap1 libdrm-radeon1
  libdrm-tegra0 libedit2 libegl-mesa0 libegl1 libelf1 libexpat1 libexpat1-dev
  libfile-stripnondeterminism-perl libfontconfig1 libfontconfig1-dev
  libfreetype6 libfreetype6-dev libgbm1 libgfortran5 libgl1 libgl1-mesa-dev
  libgl1-mesa-dri libgl1-mesa-glx libglapi-mesa libgles1 libgles2 libglew-dev
  libglew2.1 libglib2.0-0 libglm-dev libglu1-mesa libglu1-mesa-dev
  libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0 libglx0 libgraphite2-3
  libgs9 libgs9-common libharfbuzz-icu0 libharfbuzz0b libice-dev libice6
  libicu-dev libicu63 libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo
  libkpathsea6 liblapack3 liblcms2-2 libllvm7 libmagic-mgc libmagic1 libmpdec2
  libopengl0 libopenjp2-7 libpaper-utils libpaper1 libpipeline1 libpixman-1-0
  libpng-dev libpotrace0 libptexenc1 libpthread-stubs0-dev libpython-dev
  libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
  libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib
  libpython3.6-minimal libpython3.6-stdlib libsensors4 libsigsegv2 libsm-dev
  libsm6 libsynctex2 libtcl8.6 libteckit0 libtexlua52 libtexlua53
  libtexluajit2 libtiff5 libtk8.6 libtool libwayland-client0
  libwayland-server0 libwebp6 libwoff1 libx11-6 libx11-data libx11-dev
  libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxaw7 libxcb-dri2-0
  libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev
  libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev
  libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev
  libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-xfixes0 libxcb-xfixes0-dev
  libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6
  libxext-dev libxext6 libxfixes-dev libxfixes3 libxft-dev libxft2 libxi6
  libxml2 libxml2-dev libxmu6 libxpm4 libxrender-dev libxrender1
  libxshmfence-dev libxshmfence1 libxss-dev libxss1 libxt-dev libxt6
  libxxf86vm-dev libxxf86vm1 libxxhash0 libzzip-0-13 m4 man-db mesa-common-dev
  mime-support pkg-config po-debconf poppler-data python python-dev
  python-minimal python-numpy python2 python2-dev python2-minimal python2.7
  python2.7-dev python2.7-minimal python3 python3-distutils python3-lib2to3
  python3-minimal python3.6 python3.6-minimal sbuild-build-depends-pymol-dummy
  t1utils tcl tcl-dev tcl8.6 tcl8.6-dev tex-common texlive-base
  texlive-binaries texlive-latex-base tk tk-dev tk8.6 tk8.6-dev ucf uuid-dev
  x11-common x11proto-core-dev x11proto-damage-dev x11proto-dev
  x11proto-fixes-dev x11proto-scrnsaver-dev x11proto-xext-dev
  x11proto-xf86vidmode-dev xdg-utils xorg-sgml-doctools xtrans-dev zlib1g-dev
0 upgraded, 237 newly installed, 0 to remove and 4 not upgraded.
Need to get 154 MB of archives.
After this operation, 672 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-ecaVzj/apt_archive ./ sbuild-build-depends-pymol-dummy 0.invalid.0 [936 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-2 [25.1 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.4-3 [1160 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf poppler-data all 0.4.9-2 [1473 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.15-5 [394 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.15-5 [1089 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf python2-minimal armhf 2.7.15-3 [41.3 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.15-3 [20.9 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.61 [37.1 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libexpat1 armhf 2.2.6-1 [76.8 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.15-5 [1844 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.15-5 [299 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libpython2-stdlib armhf 2.7.15-3 [20.7 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.15-3 [20.7 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf python2 armhf 2.7.15-3 [41.5 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.15-3 [22.7 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libpython3.6-minimal armhf 3.6.7-1 [567 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf python3.6-minimal armhf 3.6.7-1 [1380 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf python3-minimal armhf 3.6.7-1 [36.4 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf libpython3.6-stdlib armhf 3.6.7-1 [1639 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf python3.6 armhf 3.6.7-1 [240 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.6.7-1 [19.9 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.6.7-1 [61.4 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0038 [67.8 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf tex-common all 6.10 [53.0 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.34-2 [239 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.34-2 [107 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.34-2 [65.0 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libedit2 armhf 3.1-20180525-1 [70.6 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-6 [547 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 1.0.0-1 [19.5 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 1.0.0-1 [12.5 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.170-0.5 [160 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-2 [67.4 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.1-2 [1051 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-5 [7976 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-2 [132 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.5.3 [1002 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf python3-lib2to3 all 3.7.1-1 [78.7 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf python3-distutils all 3.7.1-1 [144 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf dh-python all 3.20180927 [95.8 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf fonts-lmodern all 2.004.5-5 [4539 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libglvnd0 armhf 1.1.0-1 [54.5 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13.1-1 [132 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.7-1 [298 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.7-1 [689 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf libglapi-mesa armhf 18.2.6-1 [72.5 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf libx11-xcb1 armhf 2:1.6.7-1 [190 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf libxcb-dri2-0 armhf 1.13.1-1 [100 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf libxcb-dri3-0 armhf 1.13.1-1 [100 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libxcb-glx0 armhf 1.13.1-1 [114 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libxcb-present0 armhf 1.13.1-1 [99.1 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libxcb-sync1 armhf 1.13.1-1 [102 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libxcb-xfixes0 armhf 1.13.1-1 [103 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libxfixes3 armhf 1:5.0.3-1 [20.6 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libxdamage1 armhf 1:1.1.4-3 [14.0 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:80 http://172.17.0.1/private buster-staging/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.1 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libdrm-amdgpu1 armhf 2.4.95-1+rpi1 [25.8 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libdrm-etnaviv1 armhf 2.4.95-1+rpi1 [20.0 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libdrm-freedreno1 armhf 2.4.95-1+rpi1 [25.8 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libdrm-nouveau2 armhf 2.4.95-1+rpi1 [24.4 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libdrm-radeon1 armhf 2.4.95-1+rpi1 [28.5 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libllvm7 armhf 1:7-6+rpi1 [13.4 MB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libsensors4 armhf 1:3.4.0-4+b2 [50.4 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libgl1-mesa-dri armhf 18.2.6-1 [4661 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf libglx-mesa0 armhf 18.2.6-1 [161 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf libglx0 armhf 1.1.0-1 [24.6 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf libgl1 armhf 1.1.0-1 [107 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf libgl1-mesa-glx armhf 18.2.6-1 [46.0 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libxi6 armhf 2:1.7.9-1 [77.8 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf freeglut3 armhf 2.8.1-3 [112 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf xorg-sgml-doctools all 1:1.11-1 [21.9 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf x11proto-dev all 2018.4-4 [251 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf x11proto-core-dev all 2018.4-4 [3128 B]
Get:98 http://172.17.0.1/private buster-staging/main armhf libxau-dev armhf 1:1.0.8-1+b2 [22.4 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.9 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf xtrans-dev all 1.3.5-1 [100 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf libpthread-stubs0-dev armhf 0.3-4 [4042 B]
Get:102 http://172.17.0.1/private buster-staging/main armhf libxcb1-dev armhf 1.13.1-1 [169 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf libx11-dev armhf 2:1.6.7-1 [760 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf libdrm-omap1 armhf 2.4.95-1+rpi1 [16.1 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf libdrm-exynos1 armhf 2.4.95-1+rpi1 [19.1 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf libdrm-tegra0 armhf 2.4.95-1+rpi1 [15.5 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libdrm-dev armhf 2.4.95-1+rpi1 [139 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf mesa-common-dev armhf 18.2.6-1 [598 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf libglvnd-core-dev armhf 1.1.0-1 [13.2 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf libwayland-server0 armhf 1.16.0-1 [26.0 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf libgbm1 armhf 18.2.6-1 [62.6 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf libwayland-client0 armhf 1.16.0-1 [21.2 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf libegl-mesa0 armhf 18.2.6-1 [113 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf libegl1 armhf 1.1.0-1 [27.6 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf libgles1 armhf 1.1.0-1 [13.8 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf libgles2 armhf 1.1.0-1 [20.6 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf libopengl0 armhf 1.1.0-1 [40.3 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf libglvnd-dev armhf 1.1.0-1 [5132 B]
Get:119 http://172.17.0.1/private buster-staging/main armhf libx11-xcb-dev armhf 2:1.6.7-1 [192 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf libxcb-dri3-dev armhf 1.13.1-1 [101 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf libxcb-randr0 armhf 1.13.1-1 [109 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.13.1-1 [108 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf libxcb-render0-dev armhf 1.13.1-1 [111 kB]
Get:124 http://172.17.0.1/private buster-staging/main armhf libxcb-randr0-dev armhf 1.13.1-1 [113 kB]
Get:125 http://172.17.0.1/private buster-staging/main armhf libxcb-shape0 armhf 1.13.1-1 [99.4 kB]
Get:126 http://172.17.0.1/private buster-staging/main armhf libxcb-shape0-dev armhf 1.13.1-1 [101 kB]
Get:127 http://172.17.0.1/private buster-staging/main armhf libxcb-xfixes0-dev armhf 1.13.1-1 [105 kB]
Get:128 http://172.17.0.1/private buster-staging/main armhf libxcb-sync-dev armhf 1.13.1-1 [104 kB]
Get:129 http://172.17.0.1/private buster-staging/main armhf libxcb-present-dev armhf 1.13.1-1 [101 kB]
Get:130 http://172.17.0.1/private buster-staging/main armhf libxshmfence-dev armhf 1.3-1 [8224 B]
Get:131 http://172.17.0.1/private buster-staging/main armhf libxcb-dri2-0-dev armhf 1.13.1-1 [102 kB]
Get:132 http://172.17.0.1/private buster-staging/main armhf libxcb-glx0-dev armhf 1.13.1-1 [120 kB]
Get:133 http://172.17.0.1/private buster-staging/main armhf x11proto-fixes-dev all 1:2018.4-4 [3140 B]
Get:134 http://172.17.0.1/private buster-staging/main armhf libxfixes-dev armhf 1:5.0.3-1 [22.7 kB]
Get:135 http://172.17.0.1/private buster-staging/main armhf x11proto-damage-dev all 1:2018.4-4 [3140 B]
Get:136 http://172.17.0.1/private buster-staging/main armhf libxdamage-dev armhf 1:1.1.4-3 [13.9 kB]
Get:137 http://172.17.0.1/private buster-staging/main armhf x11proto-xext-dev all 2018.4-4 [3128 B]
Get:138 http://172.17.0.1/private buster-staging/main armhf libxext-dev armhf 2:1.3.3-1+b2 [102 kB]
Get:139 http://172.17.0.1/private buster-staging/main armhf x11proto-xf86vidmode-dev all 2018.4-4 [3140 B]
Get:140 http://172.17.0.1/private buster-staging/main armhf libxxf86vm-dev armhf 1:1.1.4-1+b2 [24.9 kB]
Get:141 http://172.17.0.1/private buster-staging/main armhf libgl1-mesa-dev armhf 18.2.6-1 [46.7 kB]
Get:142 http://172.17.0.1/private buster-staging/main armhf libglu1-mesa armhf 9.0.0-2.1 [130 kB]
Get:143 http://172.17.0.1/private buster-staging/main armhf libglu1-mesa-dev armhf 9.0.0-2.1 [169 kB]
Get:144 http://172.17.0.1/private buster-staging/main armhf x11-common all 1:7.7+19 [251 kB]
Get:145 http://172.17.0.1/private buster-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:146 http://172.17.0.1/private buster-staging/main armhf libsm6 armhf 2:1.2.2-1+b3 [31.2 kB]
Get:147 http://172.17.0.1/private buster-staging/main armhf libxt6 armhf 1:1.1.5-1 [155 kB]
Get:148 http://172.17.0.1/private buster-staging/main armhf libice-dev armhf 2:1.0.9-2 [58.8 kB]
Get:149 http://172.17.0.1/private buster-staging/main armhf libsm-dev armhf 2:1.2.2-1+b3 [33.4 kB]
Get:150 http://172.17.0.1/private buster-staging/main armhf libxt-dev armhf 1:1.1.5-1 [390 kB]
Get:151 http://172.17.0.1/private buster-staging/main armhf freeglut3-dev armhf 2.8.1-3 [170 kB]
Get:152 http://172.17.0.1/private buster-staging/main armhf icu-devtools armhf 63.1-5 [166 kB]
Get:153 http://172.17.0.1/private buster-staging/main armhf libavahi-common-data armhf 0.7-4+b1 [122 kB]
Get:154 http://172.17.0.1/private buster-staging/main armhf libavahi-common3 armhf 0.7-4+b1 [51.1 kB]
Get:155 http://172.17.0.1/private buster-staging/main armhf libavahi-client3 armhf 0.7-4+b1 [54.0 kB]
Get:156 http://172.17.0.1/private buster-staging/main armhf libgfortran5 armhf 8.2.0-9+rpi1 [205 kB]
Get:157 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-2 [103 kB]
Get:158 http://172.17.0.1/private buster-staging/main armhf libbrotli1 armhf 1.0.7-1 [256 kB]
Get:159 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.9.1-3 [318 kB]
Get:160 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:161 http://172.17.0.1/private buster-staging/main armhf libpixman-1-0 armhf 0.34.0-2 [451 kB]
Get:162 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.13.1-1 [99.2 kB]
Get:163 http://172.17.0.1/private buster-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:164 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.16.0-1 [600 kB]
Get:165 http://172.17.0.1/private buster-staging/main armhf libcups2 armhf 2.2.9-2 [287 kB]
Get:166 http://172.17.0.1/private buster-staging/main armhf libcupsimage2 armhf 2.2.9-2 [129 kB]
Get:167 http://172.17.0.1/private buster-staging/main armhf libexpat1-dev armhf 2.2.6-1 [127 kB]
Get:168 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
Get:169 http://172.17.0.1/private buster-staging/main armhf libpng-dev armhf 1.6.34-2+rpi1 [275 kB]
Get:170 http://172.17.0.1/private buster-staging/main armhf libfreetype6-dev armhf 2.9.1-3 [479 kB]
Get:171 http://172.17.0.1/private buster-staging/main armhf uuid-dev armhf 2.32.1-0.1 [91.9 kB]
Get:172 http://172.17.0.1/private buster-staging/main armhf pkg-config armhf 0.29-4 [59.2 kB]
Get:173 http://172.17.0.1/private buster-staging/main armhf libfontconfig1-dev armhf 2.13.1-2 [943 kB]
Get:174 http://172.17.0.1/private buster-staging/main armhf libglew2.1 armhf 2.1.0-2 [160 kB]
Get:175 http://172.17.0.1/private buster-staging/main armhf libglew-dev armhf 2.1.0-2 [141 kB]
Get:176 http://172.17.0.1/private buster-staging/main armhf libglm-dev all 0.9.9~a2-2 [164 kB]
Get:177 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.12-1 [69.1 kB]
Get:178 http://172.17.0.1/private buster-staging/main armhf libgs9-common all 9.26~dfsg-1 [5135 kB]
Get:179 http://172.17.0.1/private buster-staging/main armhf libijs-0.35 armhf 0.35-13 [16.7 kB]
Get:180 http://172.17.0.1/private buster-staging/main armhf libjbig2dec0 armhf 0.15-2 [53.3 kB]
Get:181 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:182 http://172.17.0.1/private buster-staging/main armhf liblcms2-2 armhf 2.9-3 [116 kB]
Get:183 http://172.17.0.1/private buster-staging/main armhf libopenjp2-7 armhf 2.3.0-1 [139 kB]
Get:184 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.24+nmu5 [20.8 kB]
Get:185 http://172.17.0.1/private buster-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:186 http://172.17.0.1/private buster-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:187 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.10-3 [235 kB]
Get:188 http://172.17.0.1/private buster-staging/main armhf libgs9 armhf 9.26~dfsg-1 [1843 kB]
Get:189 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 2.1.1-1+rpi1 [1013 kB]
Get:190 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-icu0 armhf 2.1.1-1+rpi1 [742 kB]
Get:191 http://172.17.0.1/private buster-staging/main armhf libicu-dev armhf 63.1-5 [8845 kB]
Get:192 http://172.17.0.1/private buster-staging/main armhf libkpathsea6 armhf 2018.20181104.49075-2 [156 kB]
Get:193 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.8.0-2 [1493 kB]
Get:194 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.24+nmu5 [17.2 kB]
Get:195 http://172.17.0.1/private buster-staging/main armhf libpotrace0 armhf 1.15-1 [23.9 kB]
Get:196 http://172.17.0.1/private buster-staging/main armhf libptexenc1 armhf 2018.20181104.49075-2 [58.1 kB]
Get:197 http://172.17.0.1/private buster-staging/main armhf libpython2.7 armhf 2.7.15-5 [871 kB]
Get:198 http://172.17.0.1/private buster-staging/main armhf libpython2.7-dev armhf 2.7.15-5 [30.8 MB]
Get:199 http://172.17.0.1/private buster-staging/main armhf libpython2-dev armhf 2.7.15-3 [20.8 kB]
Get:200 http://172.17.0.1/private buster-staging/main armhf libpython-dev armhf 2.7.15-3 [20.8 kB]
Get:201 http://172.17.0.1/private buster-staging/main armhf libsynctex2 armhf 2018.20181104.49075-2 [67.3 kB]
Get:202 http://172.17.0.1/private buster-staging/main armhf libtcl8.6 armhf 8.6.8+dfsg-4 [863 kB]
Get:203 http://172.17.0.1/private buster-staging/main armhf libteckit0 armhf 2.5.8+ds2-5 [245 kB]
Get:204 http://172.17.0.1/private buster-staging/main armhf libtexlua52 armhf 2018.20181104.49075-2 [86.9 kB]
Get:205 http://172.17.0.1/private buster-staging/main armhf libtexlua53 armhf 2018.20181104.49075-2 [97.9 kB]
Get:206 http://172.17.0.1/private buster-staging/main armhf libtexluajit2 armhf 2018.20181104.49075-2 [205 kB]
Get:207 http://172.17.0.1/private buster-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:208 http://172.17.0.1/private buster-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:209 http://172.17.0.1/private buster-staging/main armhf libtk8.6 armhf 8.6.8-4 [657 kB]
Get:210 http://172.17.0.1/private buster-staging/main armhf libwoff1 armhf 1.0.2-1 [36.1 kB]
Get:211 http://172.17.0.1/private buster-staging/main armhf libxmu6 armhf 2:1.1.2-2 [52.0 kB]
Get:212 http://172.17.0.1/private buster-staging/main armhf libxpm4 armhf 1:3.5.12-1 [43.6 kB]
Get:213 http://172.17.0.1/private buster-staging/main armhf libxaw7 armhf 2:1.0.13-1 [164 kB]
Get:214 http://172.17.0.1/private buster-staging/main armhf libxrender-dev armhf 1:0.9.10-1 [37.7 kB]
Get:215 http://172.17.0.1/private buster-staging/main armhf libxft-dev armhf 2.3.2-2 [60.3 kB]
Get:216 http://172.17.0.1/private buster-staging/main armhf libxml2-dev armhf 2.9.4+dfsg1-7+b1 [640 kB]
Get:217 http://172.17.0.1/private buster-staging/main armhf x11proto-scrnsaver-dev all 2018.4-4 [3136 B]
Get:218 http://172.17.0.1/private buster-staging/main armhf libxss-dev armhf 1:1.2.3-1 [23.0 kB]
Get:219 http://172.17.0.1/private buster-staging/main armhf libxxhash0 armhf 0.6.5-2 [10.0 kB]
Get:220 http://172.17.0.1/private buster-staging/main armhf libzzip-0-13 armhf 0.13.62-3.1 [51.5 kB]
Get:221 http://172.17.0.1/private buster-staging/main armhf python2.7-dev armhf 2.7.15-5 [289 kB]
Get:222 http://172.17.0.1/private buster-staging/main armhf python2-dev armhf 2.7.15-3 [1216 B]
Get:223 http://172.17.0.1/private buster-staging/main armhf python-dev armhf 2.7.15-3 [1192 B]
Get:224 http://172.17.0.1/private buster-staging/main armhf python-numpy armhf 1:1.14.5-1+b1 [1786 kB]
Get:225 http://172.17.0.1/private buster-staging/main armhf t1utils armhf 1.41-2 [52.0 kB]
Get:226 http://172.17.0.1/private buster-staging/main armhf tcl8.6 armhf 8.6.8+dfsg-4 [123 kB]
Get:227 http://172.17.0.1/private buster-staging/main armhf tcl armhf 8.6.0+9 [5502 B]
Get:228 http://172.17.0.1/private buster-staging/main armhf tcl8.6-dev armhf 8.6.8+dfsg-4 [892 kB]
Get:229 http://172.17.0.1/private buster-staging/main armhf tcl-dev armhf 8.6.0+9 [7986 B]
Get:230 http://172.17.0.1/private buster-staging/main armhf texlive-binaries armhf 2018.20181104.49075-2 [7801 kB]
Get:231 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.3-1 [73.3 kB]
Get:232 http://172.17.0.1/private buster-staging/main armhf texlive-base all 2018.20181116-1 [19.4 MB]
Get:233 http://172.17.0.1/private buster-staging/main armhf texlive-latex-base all 2018.20181116-1 [985 kB]
Get:234 http://172.17.0.1/private buster-staging/main armhf tk8.6 armhf 8.6.8-4 [71.8 kB]
Get:235 http://172.17.0.1/private buster-staging/main armhf tk armhf 8.6.0+9 [5546 B]
Get:236 http://172.17.0.1/private buster-staging/main armhf tk8.6-dev armhf 8.6.8-4 [667 kB]
Get:237 http://172.17.0.1/private buster-staging/main armhf tk-dev armhf 8.6.0+9 [5324 B]
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Setting up libwoff1:armhf (1.0.2-1) ...
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Setting up libxml2:armhf (2.9.4+dfsg1-7+b1) ...
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Setting up libcroco3:armhf (0.6.12-2) ...
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Setting up pkg-config (0.29-4) ...
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Setting up libpixman-1-0:armhf (0.34.0-2) ...
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Setting up t1utils (1.41-2) ...
Processing triggers for systemd (239-13+rpi1) ...
Setting up libdrm-etnaviv1:armhf (2.4.95-1+rpi1) ...
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Setting up libexpat1-dev:armhf (2.2.6-1) ...
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Setting up libgles2:armhf (1.1.0-1) ...
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Setting up libdrm-nouveau2:armhf (2.4.95-1+rpi1) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libzzip-0-13:armhf (0.13.62-3.1) ...
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Setting up libpython2.7-stdlib:armhf (2.7.15-5) ...
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Setting up libmpdec2:armhf (2.4.2-2) ...
Setting up fonts-lmodern (2.004.5-5) ...
Setting up libavahi-common-data:armhf (0.7-4+b1) ...
Setting up libwayland-server0:armhf (1.16.0-1) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1) ...
Setting up libfile-stripnondeterminism-perl (1.0.0-1) ...
Setting up libedit2:armhf (3.1-20180525-1) ...
Setting up libpaper1:armhf (1.1.24+nmu5) ...

Creating config file /etc/papersize with new version
Setting up libpython3.6-stdlib:armhf (3.6.7-1) ...
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Setting up fontconfig-config (2.13.1-2) ...
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Setting up tex-common (6.10) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up x11proto-core-dev (2018.4-4) ...
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Setting up gettext (0.19.8.1-9) ...
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Setting up libdrm-dev:armhf (2.4.95-1+rpi1) ...
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Setting up libgbm1:armhf (18.2.6-1) ...
Setting up libgl1-mesa-dri:armhf (18.2.6-1) ...
Setting up python2.7 (2.7.15-5) ...
Setting up libharfbuzz0b:armhf (2.1.1-1+rpi1) ...
Setting up libtiff5:armhf (4.0.10-3) ...
Setting up x11proto-xf86vidmode-dev (2018.4-4) ...
Setting up libxau-dev:armhf (1:1.0.8-1+b2) ...
Setting up autoconf (2.69-11) ...
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Setting up file (1:5.34-2) ...
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Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up libblas3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libxdmcp-dev:armhf (1:1.1.2-3) ...
Setting up tcl8.6 (8.6.8+dfsg-4) ...
Setting up libpython2.7:armhf (2.7.15-5) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up man-db (2.8.4-3) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libpython2-stdlib:armhf (2.7.15-3) ...
Setting up libpython2.7-dev:armhf (2.7.15-5) ...
Setting up libavahi-common3:armhf (0.7-4+b1) ...
Setting up libpng-dev:armhf (1.6.34-2+rpi1) ...
Setting up python2.7-dev (2.7.15-5) ...
Setting up libxcb1:armhf (1.13.1-1) ...
Setting up tcl8.6-dev:armhf (8.6.8+dfsg-4) ...
Setting up libtool (2.4.6-6) ...
Setting up libpython3-stdlib:armhf (3.6.7-1) ...
Setting up libxcb-present0:armhf (1.13.1-1) ...
Setting up libfontconfig1:armhf (2.13.1-2) ...
Setting up libxcb-dri2-0:armhf (1.13.1-1) ...
Setting up libsm6:armhf (2:1.2.2-1+b3) ...
Setting up libxcb-dri3-0:armhf (1.13.1-1) ...
Setting up libxcb-glx0:armhf (1.13.1-1) ...
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Setting up libxcb-xfixes0:armhf (1.13.1-1) ...
Setting up libxcb-render0:armhf (1.13.1-1) ...
Setting up libharfbuzz-icu0:armhf (2.1.1-1+rpi1) ...
Setting up po-debconf (1.0.21) ...
Setting up python3 (3.6.7-1) ...
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libx11-6:armhf (2:1.6.7-1) ...
Setting up tcl (8.6.0+9) ...
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Setting up libpython2-dev:armhf (2.7.15-3) ...
Setting up libpython-stdlib:armhf (2.7.15-3) ...
Setting up libfreetype6-dev:armhf (2.9.1-3) ...
Setting up libice-dev:armhf (2:1.0.9-2) ...
Setting up python2-dev (2.7.15-3) ...
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Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up libxcb-shape0:armhf (1.13.1-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libxcb1-dev:armhf (1.13.1-1) ...
Setting up libxcb-glx0-dev:armhf (1.13.1-1) ...
Setting up libavahi-client3:armhf (0.7-4+b1) ...
Setting up libegl-mesa0:armhf (18.2.6-1) ...
Setting up libx11-dev:armhf (2:1.6.7-1) ...
Setting up libxft2:armhf (2.3.2-2) ...
Setting up python3-lib2to3 (3.7.1-1) ...
Setting up tcl-dev:armhf (8.6.0+9) ...
Setting up python3-distutils (3.7.1-1) ...
Setting up python (2.7.15-3) ...
Setting up libxcb-sync-dev:armhf (1.13.1-1) ...
Setting up libcups2:armhf (2.2.9-2) ...
Setting up libfontconfig1-dev:armhf (2.13.1-2) ...
Setting up libx11-xcb-dev:armhf (2:1.6.7-1) ...
Setting up libpython-dev:armhf (2.7.15-3) ...
Setting up libsm-dev:armhf (2:1.2.2-1+b3) ...
Setting up mesa-common-dev:armhf (18.2.6-1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libxfixes3:armhf (1:5.0.3-1) ...
Setting up python-dev (2.7.15-3) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libxrender-dev:armhf (1:0.9.10-1) ...
Setting up python-numpy (1:1.14.5-1+b1) ...
Setting up libxmu6:armhf (2:1.1.2-2) ...
Setting up libxcb-dri2-0-dev:armhf (1.13.1-1) ...
Setting up libxcb-render0-dev:armhf (1.13.1-1) ...
Setting up libcupsimage2:armhf (2.2.9-2) ...
Setting up libegl1:armhf (1.1.0-1) ...
Setting up libxft-dev:armhf (2.3.2-2) ...
Setting up libxcb-dri3-dev:armhf (1.13.1-1) ...
Setting up libxext-dev:armhf (2:1.3.3-1+b2) ...
Setting up libxcb-shape0-dev:armhf (1.13.1-1) ...
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up libxxf86vm-dev:armhf (1:1.1.4-1+b2) ...
Setting up libxfixes-dev:armhf (1:5.0.3-1) ...
Setting up libgs9:armhf (9.26~dfsg-1) ...
Setting up dh-python (3.20180927) ...
Setting up libxi6:armhf (2:1.7.9-1) ...
Setting up libxaw7:armhf (2:1.0.13-1) ...
Setting up libcairo2:armhf (1.16.0-1) ...
Setting up libxcb-randr0-dev:armhf (1.13.1-1) ...
Setting up libxt-dev:armhf (1:1.1.5-1) ...
Setting up libxdamage1:armhf (1:1.1.4-3) ...
Setting up libxcb-xfixes0-dev:armhf (1.13.1-1) ...
Setting up libtk8.6:armhf (8.6.8-4) ...
Setting up libxdamage-dev:armhf (1:1.1.4-3) ...
Setting up texlive-binaries (2018.20181104.49075-2) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libxss-dev:armhf (1:1.2.3-1) ...
Setting up texlive-base (2018.20181116-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
Setting up libxcb-present-dev:armhf (1.13.1-1) ...
Setting up texlive-latex-base (2018.20181116-1) ...
Setting up libglx-mesa0:armhf (18.2.6-1) ...
Setting up tk8.6 (8.6.8-4) ...
Setting up tk8.6-dev:armhf (8.6.8-4) ...
Setting up tk (8.6.0+9) ...
Setting up libglx0:armhf (1.1.0-1) ...
Setting up tk-dev:armhf (8.6.0+9) ...
Setting up libgl1:armhf (1.1.0-1) ...
Setting up libglu1-mesa:armhf (9.0.0-2.1) ...
Setting up freeglut3:armhf (2.8.1-3) ...
Setting up libglew2.1:armhf (2.1.0-2) ...
Setting up libglvnd-dev:armhf (1.1.0-1) ...
Setting up libgl1-mesa-dev:armhf (18.2.6-1) ...
Setting up libgl1-mesa-glx:armhf (18.2.6-1) ...
Setting up libglu1-mesa-dev:armhf (9.0.0-2.1) ...
Setting up libglew-dev:armhf (2.1.0-2) ...
Setting up freeglut3-dev:armhf (2.8.1-3) ...
Setting up debhelper (11.5.3) ...
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (1.0.0-1) ...
Setting up sbuild-build-depends-pymol-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-8+rpi1) ...
Processing triggers for systemd (239-13+rpi1) ...
Processing triggers for tex-common (6.10) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.31.1-10+rpi1 dpkg-dev_1.19.2 g++-8_8.2.0-9+rpi1 gcc-8_8.2.0-9+rpi1 libc6-dev_2.27-8+rpi1 libstdc++-8-dev_8.2.0-9+rpi1 libstdc++6_8.2.0-9+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 apt_1.8.0~alpha2 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-3.1 binutils_2.31.1-10+rpi1 binutils-arm-linux-gnueabihf_2.31.1-10+rpi1 binutils-common_2.31.1-10+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.32.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20170717 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-9+rpi1 dash_0.5.10.2-1 debconf_1.5.69 debhelper_11.5.3 debianutils_4.8.6 dh-autoreconf_19 dh-python_3.20180927 dh-strip-nondeterminism_1.0.0-1 diffutils_1:3.6-1 dirmngr_2.2.11-1 dmsetup_2:1.02.145-4.1+b5 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-2 e2fslibs_1.44.4-2 e2fsprogs_1.44.4-2 e2fsprogs-l10n_1.44.4-2 fakeroot_1.23-1 fdisk_2.32.1-0.1 file_1:5.34-2 findutils_4.6.0+git+20181018-1 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-5 freeglut3_2.8.1-3 freeglut3-dev_2.8.1-3 g++_4:8.2.0-2+rpi1 g++-8_8.2.0-9+rpi1 gcc_4:8.2.0-2+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-8_8.2.0-9+rpi1 gcc-8-base_8.2.0-9+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gnupg_2.2.11-1 gnupg-agent_2.2.11-1 gnupg-l10n_2.2.11-1 gnupg-utils_2.2.11-1 gpg_2.2.11-1 gpg-agent_2.2.11-1 gpg-wks-client_2.2.11-1 gpg-wks-server_2.2.11-1 gpgconf_2.2.11-1 gpgsm_2.2.11-1 gpgv_2.2.11-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.9-2.1 hostname_3.21 icu-devtools_63.1-5 inetutils-ping_2:1.9.4-5 init-system-helpers_1.56 initramfs-tools_0.132 initramfs-tools-core_0.132 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-14+rpi1 kmod_25-2 krb5-locales_1.16.1-1 libacl1_2.2.52-3 libapparmor1_2.13.1-3+b1 libapt-pkg5.0_1.8.0~alpha2 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.1 libasan5_8.2.0-9+rpi1 libassuan0_2.5.1-2 libatomic1_8.2.0-9+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libavahi-client3_0.7-4+b1 libavahi-common-data_0.7-4+b1 libavahi-common3_0.7-4+b1 libbinutils_2.31.1-10+rpi1 libblas3_3.8.0-2 libblkid1_2.32.1-0.1 libbrotli1_1.0.7-1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.27-8+rpi1 libc-dev-bin_2.27-8+rpi1 libc6_2.27-8+rpi1 libc6-dev_2.27-8+rpi1 libcairo2_1.16.0-1 libcap-ng0_0.7.9-1 libcap2_1:2.25-1.2 libcc1-0_8.2.0-9+rpi1 libcom-err2_1.44.4-2 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.5-2 libcryptsetup4_2:1.7.5-1 libcups2_2.2.9-2 libcupsimage2_2.2.9-2 libdb5.3_5.3.28+dfsg1-0.2 libdbus-1-3_1.12.10-1 libdebconfclient0_0.245 libdevmapper1.02.1_2:1.02.145-4.1+b5 libdpkg-perl_1.19.2 libdrm-amdgpu1_2.4.95-1+rpi1 libdrm-common_2.4.95-1+rpi1 libdrm-dev_2.4.95-1+rpi1 libdrm-etnaviv1_2.4.95-1+rpi1 libdrm-exynos1_2.4.95-1+rpi1 libdrm-freedreno1_2.4.95-1+rpi1 libdrm-nouveau2_2.4.95-1+rpi1 libdrm-omap1_2.4.95-1+rpi1 libdrm-radeon1_2.4.95-1+rpi1 libdrm-tegra0_2.4.95-1+rpi1 libdrm2_2.4.95-1+rpi1 libedit2_3.1-20180525-1 libegl-mesa0_18.2.6-1 libegl1_1.1.0-1 libelf1_0.170-0.5 libexpat1_2.2.6-1 libexpat1-dev_2.2.6-1 libext2fs2_1.44.4-2 libfakeroot_1.23-1 libfdisk1_2.32.1-0.1 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.0.0-1 libfontconfig1_2.13.1-2 libfontconfig1-dev_2.13.1-2 libfreetype6_2.9.1-3 libfreetype6-dev_2.9.1-3 libgbm1_18.2.6-1 libgcc-8-dev_8.2.0-9+rpi1 libgcc1_1:8.2.0-9+rpi1 libgcrypt20_1.8.4-3 libgdbm-compat4_1.18.1-2 libgdbm3_1.8.3-14 libgdbm6_1.18.1-2 libgfortran5_8.2.0-9+rpi1 libgl1_1.1.0-1 libgl1-mesa-dev_18.2.6-1 libgl1-mesa-dri_18.2.6-1 libgl1-mesa-glx_18.2.6-1 libglapi-mesa_18.2.6-1 libgles1_1.1.0-1 libgles2_1.1.0-1 libglew-dev_2.1.0-2 libglew2.1_2.1.0-2 libglib2.0-0_2.58.1-2 libglm-dev_0.9.9~a2-2 libglu1-mesa_9.0.0-2.1 libglu1-mesa-dev_9.0.0-2.1 libglvnd-core-dev_1.1.0-1 libglvnd-dev_1.1.0-1 libglvnd0_1.1.0-1 libglx-mesa0_18.2.6-1 libglx0_1.1.0-1 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.19-1+b1 libgomp1_8.2.0-9+rpi1 libgpg-error-l10n_1.32-3 libgpg-error0_1.32-3 libgraphite2-3_1.3.12-1 libgs9_9.26~dfsg-1 libgs9-common_9.26~dfsg-1 libgssapi-krb5-2_1.16.1-1 libharfbuzz-icu0_2.1.1-1+rpi1 libharfbuzz0b_2.1.1-1+rpi1 libhogweed4_3.4-1 libice-dev_2:1.0.9-2 libice6_2:1.0.9-2 libicu-dev_63.1-5 libicu63_63.1-5 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libijs-0.35_0.35-13 libip4tc0_1.8.2-2 libisl19_0.20-2 libjbig0_2.1-3.1+b2 libjbig2dec0_0.15-2 libjpeg62-turbo_1:1.5.2-2+b1 libjson-c3_0.12.1-1.3 libk5crypto3_1.16.1-1 libkeyutils1_1.5.9-9.3 libklibc_2.0.4-14+rpi1 libkmod2_25-2 libkpathsea6_2018.20181104.49075-2 libkrb5-3_1.16.1-1 libkrb5support0_1.16.1-1 libksba8_1.3.5-2 liblapack3_3.8.0-2 liblcms2-2_2.9-3 libldap-2.4-2_2.4.46+dfsg-5+rpi1+b1 libldap-common_2.4.46+dfsg-5+rpi1 libllvm7_1:7-6+rpi1 liblz4-1_1.8.2-1+rpi1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmount1_2.32.1-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.1-1 libncurses5_6.1+20181013-1 libncurses6_6.1+20181013-1 libncursesw5_6.1+20181013-1 libncursesw6_6.1+20181013-1 libnettle6_3.4-1 libnpth0_1.6-1 libopengl0_1.1.0-1 libopenjp2-7_2.3.0-1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-3.8 libpam-modules-bin_1.1.8-3.8 libpam-runtime_1.1.8-3.8 libpam0g_1.1.8-3.8 libpaper-utils_1.1.24+nmu5 libpaper1_1.1.24+nmu5 libpcre3_2:8.39-11+rpi1 libperl5.24_5.24.1-7 libperl5.28_5.28.1-1 libpipeline1_1.5.0-2 libpixman-1-0_0.34.0-2 libplymouth4_0.9.4-1 libpng-dev_1.6.34-2+rpi1 libpng16-16_1.6.34-2+rpi1 libpotrace0_1.15-1 libprocps7_2:3.3.15-2 libptexenc1_2018.20181104.49075-2 libpthread-stubs0-dev_0.3-4 libpython-dev_2.7.15-3 libpython-stdlib_2.7.15-3 libpython2-dev_2.7.15-3 libpython2-stdlib_2.7.15-3 libpython2.7_2.7.15-5 libpython2.7-dev_2.7.15-5 libpython2.7-minimal_2.7.15-5 libpython2.7-stdlib_2.7.15-5 libpython3-stdlib_3.6.7-1 libpython3.6-minimal_3.6.7-1 libpython3.6-stdlib_3.6.7-1 libreadline7_7.0-5 libsasl2-2_2.1.27~rc8-1 libsasl2-modules_2.1.27~rc8-1 libsasl2-modules-db_2.1.27~rc8-1 libseccomp2_2.3.3-3 libselinux1_2.8-1 libsemanage-common_2.8-1 libsemanage1_2.8-1 libsensors4_1:3.4.0-4+b2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsm-dev_2:1.2.2-1+b3 libsm6_2:1.2.2-1+b3 libsmartcols1_2.32.1-0.1 libsqlite3-0_3.25.3-2 libss2_1.44.4-2 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-9+rpi1 libstdc++6_8.2.0-9+rpi1 libsynctex2_2018.20181104.49075-2 libsystemd0_239-13+rpi1 libtasn1-6_4.13-3 libtcl8.6_8.6.8+dfsg-4 libteckit0_2.5.8+ds2-5 libtexlua52_2018.20181104.49075-2 libtexlua53_2018.20181104.49075-2 libtexluajit2_2018.20181104.49075-2 libtiff5_4.0.10-3 libtinfo5_6.1+20181013-1 libtinfo6_6.1+20181013-1 libtk8.6_8.6.8-4 libtool_2.4.6-6 libubsan1_8.2.0-9+rpi1 libudev1_239-13+rpi1 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.32.1-0.1 libwayland-client0_1.16.0-1 libwayland-server0_1.16.0-1 libwebp6_0.6.1-2 libwoff1_1.0.2-1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libx11-dev_2:1.6.7-1 libx11-xcb-dev_2:1.6.7-1 libx11-xcb1_2:1.6.7-1 libxau-dev_1:1.0.8-1+b2 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1 libxcb-dri2-0_1.13.1-1 libxcb-dri2-0-dev_1.13.1-1 libxcb-dri3-0_1.13.1-1 libxcb-dri3-dev_1.13.1-1 libxcb-glx0_1.13.1-1 libxcb-glx0-dev_1.13.1-1 libxcb-present-dev_1.13.1-1 libxcb-present0_1.13.1-1 libxcb-randr0_1.13.1-1 libxcb-randr0-dev_1.13.1-1 libxcb-render0_1.13.1-1 libxcb-render0-dev_1.13.1-1 libxcb-shape0_1.13.1-1 libxcb-shape0-dev_1.13.1-1 libxcb-shm0_1.13.1-1 libxcb-sync-dev_1.13.1-1 libxcb-sync1_1.13.1-1 libxcb-xfixes0_1.13.1-1 libxcb-xfixes0-dev_1.13.1-1 libxcb1_1.13.1-1 libxcb1-dev_1.13.1-1 libxdamage-dev_1:1.1.4-3 libxdamage1_1:1.1.4-3 libxdmcp-dev_1:1.1.2-3 libxdmcp6_1:1.1.2-3 libxext-dev_2:1.3.3-1+b2 libxext6_2:1.3.3-1+b2 libxfixes-dev_1:5.0.3-1 libxfixes3_1:5.0.3-1 libxft-dev_2.3.2-2 libxft2_2.3.2-2 libxi6_2:1.7.9-1 libxml2_2.9.4+dfsg1-7+b1 libxml2-dev_2.9.4+dfsg1-7+b1 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender-dev_1:0.9.10-1 libxrender1_1:0.9.10-1 libxshmfence-dev_1.3-1 libxshmfence1_1.3-1 libxss-dev_1:1.2.3-1 libxss1_1:1.2.3-1 libxt-dev_1:1.1.5-1 libxt6_1:1.1.5-1 libxxf86vm-dev_1:1.1.4-1+b2 libxxf86vm1_1:1.1.4-1+b2 libxxhash0_0.6.5-2 libzstd1_1.3.5+dfsg-1+rpi1 libzzip-0-13_0.13.62-3.1 linux-base_4.5 linux-libc-dev_4.18.20-2+rpi1 login_1:4.5-1.1 lsb-base_9.20170808+rpi1 m4_1.4.18-2 make_4.2.1-1.2 makedev_2.3.1-94 man-db_2.8.4-3 mawk_1.3.3-17 mesa-common-dev_18.2.6-1 mime-support_3.61 mount_2.32.1-0.1 multiarch-support_2.27-8+rpi1 nano_3.2-1 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 netbase_5.5 openssl_1.1.1a-1 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-1 perl-base_5.28.1-1 perl-modules-5.24_5.24.1-7 perl-modules-5.28_5.28.1-1 pinentry-curses_1.1.0-1 pkg-config_0.29-4 plymouth_0.9.4-1 po-debconf_1.0.21 poppler-data_0.4.9-2 procps_2:3.3.15-2 python_2.7.15-3 python-dev_2.7.15-3 python-minimal_2.7.15-3 python-numpy_1:1.14.5-1+b1 python2_2.7.15-3 python2-dev_2.7.15-3 python2-minimal_2.7.15-3 python2.7_2.7.15-5 python2.7-dev_2.7.15-5 python2.7-minimal_2.7.15-5 python3_3.6.7-1 python3-distutils_3.7.1-1 python3-lib2to3_3.7.1-1 python3-minimal_3.6.7-1 python3.6_3.6.7-1 python3.6-minimal_3.6.7-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-pymol-dummy_0.invalid.0 sed_4.5-2 sensible-utils_0.0.12 systemd_239-13+rpi1 sysvinit-utils_2.92~beta-2 t1utils_1.41-2 tar_1.30+dfsg-3+rpi1 tcl_8.6.0+9 tcl-dev_8.6.0+9 tcl8.6_8.6.8+dfsg-4 tcl8.6-dev_8.6.8+dfsg-4 tex-common_6.10 texlive-base_2018.20181116-1 texlive-binaries_2018.20181104.49075-2 texlive-latex-base_2018.20181116-1 tk_8.6.0+9 tk-dev_8.6.0+9 tk8.6_8.6.8-4 tk8.6-dev_8.6.8-4 tzdata_2018g-1 ucf_3.0038 udev_239-13+rpi1 util-linux_2.32.1-0.1 uuid-dev_2.32.1-0.1 x11-common_1:7.7+19 x11proto-core-dev_2018.4-4 x11proto-damage-dev_1:2018.4-4 x11proto-dev_2018.4-4 x11proto-fixes-dev_1:2018.4-4 x11proto-scrnsaver-dev_2018.4-4 x11proto-xext-dev_2018.4-4 x11proto-xf86vidmode-dev_2018.4-4 xdg-utils_1.1.3-1 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Fri Dec  7 12:50:12 2018 UTC
gpgv:                using RSA key 82383CE9165B347C787081A2CBE6BB4E5D9AD3A5
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./pymol_2.2.0+dfsg-1.1.dsc
dpkg-source: info: extracting pymol in /<<BUILDDIR>>/pymol-2.2.0+dfsg
dpkg-source: info: unpacking pymol_2.2.0+dfsg.orig.tar.gz
dpkg-source: info: unpacking pymol_2.2.0+dfsg-1.1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 02_test-suite.patch
dpkg-source: info: applying 03_povray.patch
dpkg-source: info: applying 22_fix_pymol_import.patch
dpkg-source: info: applying 27_fix_pymol_path_in_setup.patch
dpkg-source: info: applying 28_no_data_install_in_python_path.patch
dpkg-source: info: applying 31_fix_format-security.patch
dpkg-source: info: applying 32_fix_spelling_lintian_warnings.patch
dpkg-source: info: applying 33_fix_relative_paths_in_example_scripts.patch
dpkg-source: info: applying 34_fix_examples_add_fetch_instead_of_load.patch
dpkg-source: info: applying 40_mstop_movies.patch
dpkg-source: info: applying 50_force_tk.patch
dpkg-source: info: applying 60_glext-fix.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-fb71e114-7c1b-4f6e-9518-ac171c370896
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package pymol
dpkg-buildpackage: info: source version 2.2.0+dfsg-1.1
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
dh clean --with python2 --buildsystem pybuild
   dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:217: python2.7 setup.py clean 
running clean
removing '/<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
   dh_autoreconf_clean -O--buildsystem=pybuild
   debian/rules override_dh_clean
make[1]: Entering directory '/<<BUILDDIR>>/pymol-2.2.0+dfsg'
rm -f -r build test/tmp test/cmp generated
dh_clean debian/pymol.launch debian/pymol-ref-card.* \
         Rules.make create_shadertext.pyc
make[1]: Leaving directory '/<<BUILDDIR>>/pymol-2.2.0+dfsg'
 debian/rules build-arch
dh build-arch --with python2 --buildsystem pybuild
   dh_update_autotools_config -a -O--buildsystem=pybuild
   dh_autoreconf -a -O--buildsystem=pybuild
   dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:217: python2.7 setup.py config 
running config
   dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:217: /usr/bin/python setup.py build 
running build
running build_py
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/mmtf
copying modules/chempy/mmtf/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/mmtf
copying modules/chempy/mmtf/io.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/mmtf
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/tinker
copying modules/chempy/tinker/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/tinker
copying modules/chempy/tinker/amber.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/tinker
copying modules/chempy/tinker/keyword.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/tinker
copying modules/chempy/tinker/realtime.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/tinker
copying modules/chempy/tinker/state.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/tinker
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt
copying modules/pmg_qt/TextEditor.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt
copying modules/pmg_qt/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt
copying modules/pmg_qt/advanced_settings_gui.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt
copying modules/pmg_qt/builder.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt
copying modules/pmg_qt/file_dialogs.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt
copying modules/pmg_qt/keymapping.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt
copying modules/pmg_qt/mimic_pmg_tk.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt
copying modules/pmg_qt/mimic_tk.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt
copying modules/pmg_qt/properties_dialog.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt
copying modules/pmg_qt/pymol_gl_widget.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt
copying modules/pmg_qt/pymol_qt_gui.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt
copying modules/pmg_qt/volume.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/startup
copying modules/pmg_tk/startup/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/startup
copying modules/pmg_tk/startup/apbs_tools.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/startup
copying modules/pmg_tk/startup/remote_pdb_load.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/startup
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/opengl
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/opengl/glu
copying modules/pymol/opengl/glu/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/opengl/glu
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/embed
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/embed/epymol
copying modules/pymol/embed/epymol/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/embed/epymol
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/syntax
copying modules/pmg_qt/syntax/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/syntax
copying modules/pmg_qt/syntax/pml.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/syntax
copying modules/pmg_qt/syntax/pmlparser.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/syntax
copying modules/pmg_qt/syntax/python.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/syntax
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/fast
copying modules/chempy/fast/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/fast
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/fragments
copying modules/chempy/fragments/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/fragments
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/skins
copying modules/pmg_tk/skins/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/skins
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/contrib
copying modules/pymol/contrib/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/contrib
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/skins/demo
copying modules/pmg_tk/skins/demo/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/skins/demo
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/Qt
copying modules/pymol/Qt/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/Qt
copying modules/pymol/Qt/utils.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/Qt
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/opengl/glut
copying modules/pymol/opengl/glut/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/opengl/glut
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/stereochemistry
copying modules/pymol/stereochemistry/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/stereochemistry
copying modules/pymol/embed/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/embed
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol2
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copying modules/pymol2/cmd2.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol2
copying modules/pmg_tk/ColorEditor.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk
copying modules/pmg_tk/Demo.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk
copying modules/pmg_tk/PMGApp.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk
copying modules/pmg_tk/PyMOLMapLoad.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk
copying modules/pmg_tk/SetEditor.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk
copying modules/pmg_tk/Setting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk
copying modules/pmg_tk/TextEditor.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk
copying modules/pmg_tk/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk
copying modules/pmg_tk/volume.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/skins/normal
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copying modules/pmg_tk/skins/normal/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/skins/normal
copying modules/pmg_tk/skins/normal/builder.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/skins/normal
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copying modules/chempy/champ/amber99.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/champ
copying modules/chempy/champ/assign.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/champ
copying modules/chempy/champ/formal_charges.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/champ
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/embed/wxpymol
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copying modules/pymol/wizard/annotation.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
copying modules/pymol/wizard/appearance.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
copying modules/pymol/wizard/benchmark.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
copying modules/pymol/wizard/box.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
copying modules/pymol/wizard/charge.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
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copying modules/pymol/wizard/demo.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
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copying modules/pymol/wizard/measurement.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
copying modules/pymol/wizard/message.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
copying modules/pymol/wizard/mutagenesis.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
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copying modules/pymol/wizard/pair_fit.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
copying modules/pymol/wizard/pseudoatom.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
copying modules/pymol/wizard/renaming.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
copying modules/pymol/wizard/sculpting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
copying modules/pymol/wizard/security.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
copying modules/pymol/wizard/stereodemo.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
copying modules/pymol/wizard/toggle.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/opengl/gl
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copying modules/pymol/colorramping.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
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copying modules/pymol/constants_palette.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
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copying modules/pymol/experimenting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/exporting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/externing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/feedingback.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/fitting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/gui.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/headering.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
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copying modules/pymol/importing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
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copying modules/pymol/keyboard.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/keywords.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/lazyio.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/locking.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/m4x.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/menu.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/monitoring.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/morphing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/movie.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/moving.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/parser.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/parsing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/preset.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/pymolhttpd.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/querying.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/rpc.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/selecting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/selector.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/setting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/shortcut.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/util.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/vfont.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/viewing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/wizarding.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/xray.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/xwin.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/povray.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
copying modules/pymol/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bmin
copying modules/chempy/bmin/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bmin
copying modules/chempy/bmin/commands.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bmin
copying modules/chempy/bmin/realtime.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bmin
copying modules/chempy/bmin/state.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bmin
copying modules/chempy/bmin/util.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bmin
copying modules/chempy/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/arc.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/bond_amber.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/bond_mmff.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/bonds.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/brick.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/cc1.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/cex.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/charge.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/cif.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/cpv.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/dictdb.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/gamess1.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/gms.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/hetatm.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/io.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/lst.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/mae.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/map.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/mass.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/mmd.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/models.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/mol.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/mol2.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/neighbor.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/pdb.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/pkl.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/place.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/protein.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/protein_amber.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/protein_amber99.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/protein_mmff.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/protein_residues.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/sdf.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/solvate.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/water_amber.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/water_residues.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
copying modules/chempy/xyz.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/plugins
copying modules/pymol/plugins/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/plugins
copying modules/pymol/plugins/installation.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/plugins
copying modules/pymol/plugins/legacysupport.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/plugins
copying modules/pymol/plugins/managergui.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/plugins
copying modules/pymol/plugins/managergui_qt.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/plugins
copying modules/pymol/plugins/repository.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/plugins
copying modules/pymol/opengl/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/opengl
copying modules/pmg_qt/forms/askpartial.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/colors.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/fetch.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/load_mae.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/load_map.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/load_mtz.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/load_traj.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/movieexport.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/pluginitem.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/pluginmanager.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/png.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/props.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/render.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/save_molecule.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
copying modules/pmg_qt/forms/save_object.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms
running build_ext
building 'pymol._cmd' extension
creating build/temp.linux-armhf-2.7
creating build/temp.linux-armhf-2.7/build
creating build/temp.linux-armhf-2.7/build/generated
creating build/temp.linux-armhf-2.7/contrib
creating build/temp.linux-armhf-2.7/contrib/uiuc
creating build/temp.linux-armhf-2.7/contrib/uiuc/plugins
creating build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin
creating build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src
creating build/temp.linux-armhf-2.7/layer0
creating build/temp.linux-armhf-2.7/layer1
creating build/temp.linux-armhf-2.7/layer2
creating build/temp.linux-armhf-2.7/layer3
creating build/temp.linux-armhf-2.7/layer4
creating build/temp.linux-armhf-2.7/layer5
creating build/temp.linux-armhf-2.7/modules
creating build/temp.linux-armhf-2.7/modules/cealign
creating build/temp.linux-armhf-2.7/modules/cealign/src
creating build/temp.linux-armhf-2.7/ov
creating build/temp.linux-armhf-2.7/ov/src
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c build/generated/ShaderText.cpp -o build/temp.linux-armhf-2.7/build/generated/ShaderText.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c: In function 'PlugIOManagerInitAll':
contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:267:1: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
 if(ok) ok = ok && (molfile_xyzplugin_init() == VMDPLUGIN_SUCCESS);
 ^~
contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:269:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
        if(ok) {
        ^~
contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c: In function 'PlugIOManagerFreeAll':
contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:405:1: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
 if(ok) ok = ok && (molfile_xyzplugin_fini() == VMDPLUGIN_SUCCESS);
 ^~
contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:407:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
        return ok;
        ^~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c:79:
contrib/uiuc/plugins/molfile_plugin/src/fastio.h: In function 'fio_fread':
In file included from contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:51:
contrib/uiuc/plugins/molfile_plugin/src/fastio.h: In function 'fio_fread':
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:435:35: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'fio_size_t' {aka 'long long int'} [-Wformat=]
         printf("fio_fread(): rc %ld  sz: %ld\n", rc, size);
                                 ~~^              ~~
                                 %lld
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:435:44: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'fio_size_t' {aka 'long long int'} [-Wformat=]
         printf("fio_fread(): rc %ld  sz: %ld\n", rc, size);
                                          ~~^         ~~~~
                                          %lld
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:435:35: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'fio_size_t' {aka 'long long int'} [-Wformat=]
         printf("fio_fread(): rc %ld  sz: %ld\n", rc, size);
                                 ~~^              ~~
                                 %lld
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:435:44: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'fio_size_t' {aka 'long long int'} [-Wformat=]
         printf("fio_fread(): rc %ld  sz: %ld\n", rc, size);
                                          ~~^         ~~~~
                                          %lld
contrib/uiuc/plugins/molfile_plugin/src/fastio.h: In function 'fio_fwrite':
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:560:36: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'fio_size_t' {aka 'long long int'} [-Wformat=]
         printf("fio_fwrite(): rc %ld  sz: %ld  szleft: %ld  calls: %d\n",
                                  ~~^
                                  %lld
                rc, size, szleft, writecalls);
                ~~                   
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:560:45: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'fio_size_t' {aka 'long long int'} [-Wformat=]
         printf("fio_fwrite(): rc %ld  sz: %ld  szleft: %ld  calls: %d\n",
                                           ~~^
                                           %lld
                rc, size, szleft, writecalls);
                    ~~~~                      
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:560:58: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'fio_size_t' {aka 'long long int'} [-Wformat=]
         printf("fio_fwrite(): rc %ld  sz: %ld  szleft: %ld  calls: %d\n",
                                                        ~~^
                                                        %lld
                rc, size, szleft, writecalls);
                          ~~~~~~                           
contrib/uiuc/plugins/molfile_plugin/src/fastio.h: In function 'fio_fwrite':
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:560:36: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'fio_size_t' {aka 'long long int'} [-Wformat=]
         printf("fio_fwrite(): rc %ld  sz: %ld  szleft: %ld  calls: %d\n",
                                  ~~^
                                  %lld
                rc, size, szleft, writecalls);
                ~~                   
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:560:45: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'fio_size_t' {aka 'long long int'} [-Wformat=]
         printf("fio_fwrite(): rc %ld  sz: %ld  szleft: %ld  calls: %d\n",
                                           ~~^
                                           %lld
                rc, size, szleft, writecalls);
                    ~~~~                      
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:560:58: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'fio_size_t' {aka 'long long int'} [-Wformat=]
         printf("fio_fwrite(): rc %ld  sz: %ld  szleft: %ld  calls: %d\n",
                                                        ~~^
                                                        %lld
                rc, size, szleft, writecalls);
                          ~~~~~~                           
contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c: In function 'read_dcdstep':
contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:546:16: warning: variable 'readlen' set but not used [-Wunused-but-set-variable]
     fio_size_t readlen; /* number of bytes actually read            */
                ^~~~~~~
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:141:32: warning: function declaration isn't a prototype [-Wstrict-prototypes]
 static abinit_binary_header_t *abinit_header_malloc()
                                ^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:154:29: warning: function declaration isn't a prototype [-Wstrict-prototypes]
 static abinit_plugindata_t *abinit_plugindata_malloc()
                             ^~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'DEN_read_volumetric_data':
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:970:5: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
     fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:971:5: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
     fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'POT_read_volumetric_data':
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1113:5: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
     fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1114:5: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
     fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'abinit_header':
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1511:3: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
   fread(skip, 1, 8, fp);
   ^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'GEO_read_next_timestep':
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:619:5: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
     fscanf(data->file, "%*s %f %f %f", &x, &y, &z);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function 'read_dlpoly_config_structure':
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:292:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
   if (NULL == fgets(fbuffer, 1024, data->file))
   ^~
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:295:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
     if (NULL == fgets(fbuffer, 1024, data->file))
     ^~
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function 'read_dlpoly_config_timestep':
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:669:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(fbuffer, 1024, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function 'read_dlpoly_timestep':
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:554:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(fbuffer, 1024, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp: In function 'void* open_plt_read(const char*, const char*, int*)':
contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:69:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(intHeader, sizeof(int), 5, fd);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:82:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(floatHeader, sizeof(float), 6, fd);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
In file included from contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:30:
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function 'void binary_get_element(PlyFile*, char*)':
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1629:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread (&len, sizeof(int), 1, fp);
       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1631:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread (str, len, 1, fp);
       ~~~~~~^~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function 'void get_binary_item(FILE*, int, int*, unsigned int*, double*)':
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2057:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread (ptr, 1, 1, fp);
       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2063:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread (ptr, 1, 1, fp);
       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2069:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread (ptr, 2, 1, fp);
       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2075:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread (ptr, 2, 1, fp);
       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2081:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread (ptr, 4, 1, fp);
       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2087:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread (ptr, 4, 1, fp);
       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2093:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread (ptr, 4, 1, fp);
       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2099:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread (ptr, 8, 1, fp);
       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp: In function 'int read_dsn6_data(void*, int, float*, float*)':
contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:233:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(brick, sizeof(char), 512, fd);
         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp: In function 'void* open_dsn6_read(const char*, const char*, int*)':
contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:91:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(fileHeader, sizeof(short), 19, fd);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
In file included from contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c:42:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:437:18: warning: function declaration isn't a prototype [-Wstrict-prototypes]
 static qmdata_t* init_qmdata() {
                  ^~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function 'int read_bgf_timestep(void*, int, molfile_timestep_t*)':
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:243:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, bgf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:252:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, bgf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function 'int read_bgf_bonds_aux(void*, int*, int**, int**, float**)':
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:328:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, bgf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:346:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, LINESIZE, bgf->file);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:355:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(nextline, LINESIZE, bgf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:419:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, LINESIZE, bgf->file);
         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function 'int read_bgf_structure(void*, int*, molfile_atom_t*)':
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:194:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, bgf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:203:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, bgf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function 'void* open_bgf_read(const char*, const char*, int*)':
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:59:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, fd);
     ~~~~~^~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c: In function 'open_binpos_read':
contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c:64:3: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
   fread(magicchar,sizeof(char),4,fd);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c:72:3: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
   fread(&igarb,sizeof(int),1,fd);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c: In function 'get_atom_radius':
contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:166:16: warning: variable 'type' set but not used [-Wunused-but-set-variable]
   char *name, *type;
                ^~~~
contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:166:9: warning: variable 'name' set but not used [-Wunused-but-set-variable]
   char *name, *type;
         ^~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp: In function 'int read_brix_data(void*, int, float*, float*)':
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:247:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(brick, sizeof(char), 512, fd);
         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp: In function 'void* open_brix_read(const char*, const char*, int*)':
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:79:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(fd, "%3s", keyWord);
   ~~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:86:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(fd, " %s %d %d %d", keyWord, &org_x, &org_y, &org_z);
   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:93:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(fd, " %s %d %d %d", keyWord, &ext_x, &ext_y, &ext_z);
   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:100:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(fd, " %s %f %f %f", keyWord, &grid_x, &grid_y, &grid_z);
   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:109:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(fd, " %s %f %f %f %f %f %f", keyWord,
   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
          &cell_x, &cell_y, &cell_z, &cell_alpha, &cell_beta, &cell_gamma);
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:123:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(fd, " %s %f", keyWord, &prod);
   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:128:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(fd, " %s %f", keyWord, &plus);
   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:135:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(fd, " %s %f", keyWord, &sigma);
   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/carplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/carplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function 'read_car_timestep':
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:326:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:339:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:344:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:349:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:363:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, LINESIZE, data->file);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:373:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function 'read_car_structure':
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:266:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:268:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:272:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:295:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, LINESIZE, data->file);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:305:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function 'open_car_read':
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:169:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, LINESIZE, fd);
   ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:179:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, LINESIZE, fd);
   ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:182:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, fd);
     ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:210:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, LINESIZE, fd);
   ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:213:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, LINESIZE, fd);
   ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:224:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, fd);
     ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:226:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, fd);
     ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:230:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, LINESIZE, fd);
   ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:234:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, LINESIZE, fd);
       ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:245:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, fd);
     ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function 'read_car_structure':
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:127:29: warning: '%d' directive writing between 1 and 11 bytes into a region of size 8 [-Wformat-overflow=]
     sprintf(atom->resname, "%d", resid);
                             ^~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:127:28: note: directive argument in the range [-2147483648, 9999999]
     sprintf(atom->resname, "%d", resid);
                            ^~~~
In file included from /usr/include/stdio.h:862,
                 from contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:85:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:10: note: '__builtin___sprintf_chk' output between 2 and 12 bytes into a destination of size 8
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp: In function 'void* open_ccp4_read(const char*, const char*, int*)':
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:304:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(symData, 81, fd);
       ~~~~~^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:60,
                 from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:58:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, {anonymous}::Blob>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, {anonymous}::Blob> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, {anonymous}::Blob> >]':
/usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, {anonymous}::Blob>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, {anonymous}::Blob> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, {anonymous}::Blob> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, {anonymous}::Blob> >'} changed in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'std::__cxx11::string framefile(const string&, size_t, size_t, int, int)':
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:22: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=]
      sprintf(answer, "%03x/", d1);
                      ^~~~~~~
In file included from /usr/include/stdio.h:862,
                 from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx:56,
                 from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:47:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 5 and 10 bytes into a destination of size 9
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:22: warning: '%03x' directive writing between 3 and 8 bytes into a region of size between 0 and 5 [-Wformat-overflow=]
      sprintf(answer, "%03x/%03x/", d1, d2);
                      ^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:22: note: directive argument in the range [0, 2147483646]
In file included from /usr/include/stdio.h:862,
                 from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx:56,
                 from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:47:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 9 and 19 bytes into a destination of size 9
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/corplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/corplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'void DDmkdir(const string&, mode_t, int, int)':
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:15: warning: '%03x' directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=]
  sprintf(sub, "%03x/", i);
               ^~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:15: note: directive argument in the range [0, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx:56,
                 from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:47:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 5 and 10 bytes into a destination of size 6
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:22: warning: '%03x' directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=]
      sprintf(subsub, "%03x", j);
                      ^~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:22: note: directive argument in the range [0, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx:56,
                 from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:47:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 4 and 9 bytes into a destination of size 6
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c: In function 'open_rst_read':
contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:48:11: warning: variable 'timesteprst' set but not used [-Wunused-but-set-variable]
   double  timesteprst;
           ^~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:67:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(title, 82, fd);
   ^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:70:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, 82, fd);
   ^~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp: In function 'void* open_cube_read(const char*, const char*, int*)':
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:175:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(readbuf, 1023, cube->fd);    // go on to next line
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:181:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(readbuf, 1023, cube->fd); // skip second header line
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:324:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(readbuf, 1023, cube->fd);
       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:335:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(readbuf, 1023, cube->fd);
       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:337:11: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
     fscanf(cube->fd, "%d", &cube->nsets);
     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:342:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
       fscanf(cube->fd, "%d", &orb);
       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:347:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(readbuf, 1023, cube->fd);  // gobble up rest of line
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:41:
contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:44:27: warning: function declaration isn't a prototype [-Wstrict-prototypes]
 static vasp_plugindata_t *vasp_plugindata_malloc()
                           ^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c: In function 'read_vaspchgcar_data':
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:237:60: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   for (n = 0; n < data->numatoms + data->version + 5; ++n) fgets(lineptr, LINESIZE, data->file);
                                                            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:282:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
       fgets(lineptr, LINESIZE, data->file);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c: In function 'read_vaspchgcar_metadata':
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:150:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c: In function 'open_vaspchgcar_read':
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:71:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:75:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:81:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(lineptr, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:92:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:103:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
       fgets(lineptr, LINESIZE, data->file);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:131:44: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   for (i = 0; i < data->numatoms + 2; ++i) fgets(lineptr, LINESIZE, data->file);
                                            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp: In function 'int read_spider_data(void*, int, float*, float*)':
contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:286:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(datablock, total * sizeof(float), 1, fd);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp: In function 'int read_rawgraphics(void*, int*, const molfile_graphics_t**)':
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:96:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, 80, infile);
     ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:104:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, 80, infile);
     ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:119:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, 80, infile);
       ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:131:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, 80, infile);
         ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:153:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, 80, infile);
       ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:162:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, 80, infile);
       ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:171:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, 80, infile);
       ~~~~~^~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:39:
contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:44:27: warning: function declaration isn't a prototype [-Wstrict-prototypes]
 static vasp_plugindata_t *vasp_plugindata_malloc()
                           ^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function 'read_vaspoutcar_timestep':
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:239:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
       fgets(lineptr, LINESIZE, data->file);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:242:2: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
  fgets(lineptr, LINESIZE, data->file);
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function 'read_vaspoutcar_structure':
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:204:9: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
         fgets(lineptr, LINESIZE, data->file);
         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function 'open_vaspoutcar_read':
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:87:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp: In function 'void* open_uhbd_read(const char*, const char*, int*)':
contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp:102:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(&headersize, sizeof(int), 1, fd);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:41:
contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:44:27: warning: function declaration isn't a prototype [-Wstrict-prototypes]
 static vasp_plugindata_t *vasp_plugindata_malloc()
                           ^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c: In function 'read_vaspparchg_data':
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:238:60: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   for (n = 0; n < data->numatoms + data->version + 5; ++n) fgets(lineptr, LINESIZE, data->file);
                                                            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c: In function 'read_vaspparchg_metadata':
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:150:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c: In function 'open_vaspparchg_read':
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:71:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:75:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:81:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(lineptr, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:92:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:103:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
       fgets(lineptr, LINESIZE, data->file);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:131:44: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   for (i = 0; i < data->numatoms + 2; ++i) fgets(lineptr, LINESIZE, data->file);
                                            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
In file included from contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:39:
contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:44:27: warning: function declaration isn't a prototype [-Wstrict-prototypes]
 static vasp_plugindata_t *vasp_plugindata_malloc()
                           ^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c: In function 'read_vasp5xdatcar_timestep':
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:224:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(lineptr, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c: In function 'read_vasp5xdatcar_structure':
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:174:27: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   for (i = 0; i < 2; ++i) fgets(lineptr, LINESIZE, data->file);
                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:180:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(lineptr, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:189:26: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
  for (i = 0; i < 3; ++i) fgets(lineptr, LINESIZE, data->file);
                          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:194:4: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
    fgets(lineptr, LINESIZE, data->file);
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:204:26: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
  for (i = 0; i < 8; ++i) fgets(lineptr, LINESIZE, data->file);
                          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c: In function 'open_vasp5xdatcar_read':
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:69:27: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   for (i = 0; i < 5; ++i) fgets(lineptr, LINESIZE, data->file);
                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:72:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:77:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:39:
contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:44:27: warning: function declaration isn't a prototype [-Wstrict-prototypes]
 static vasp_plugindata_t *vasp_plugindata_malloc()
                           ^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c: In function 'write_vaspposcar_timestep':
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:360:40: warning: argument to 'sizeof' in 'strncpy' call is the same expression as the source; did you mean to use the size of the destination? [-Wsizeof-pointer-memaccess]
     strncpy(tmptype, atom->type, sizeof(atom->type));
                                        ^
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c: In function 'read_vaspposcar_timestep':
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:232:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:237:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(lineptr, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:246:43: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   for (i = 0; i < data->version - 2; ++i) fgets(lineptr, LINESIZE, data->file);
                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:249:35: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   if (tolower(lineptr[0]) == 's') fgets(lineptr, LINESIZE, data->file);
                                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:256:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(lineptr, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c: In function 'read_vaspposcar_structure':
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:195:42: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
  for (i = 0; i < data->version + 3; ++i) fgets(lineptr, LINESIZE, data->file);
                                          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:198:34: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
  if (tolower(lineptr[0]) == 's') fgets(lineptr, LINESIZE, data->file);
                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:203:4: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
    fgets(lineptr, LINESIZE, data->file);
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c: In function 'open_vaspposcar_read':
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:69:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:73:27: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   for (i = 0; i < 5; ++i) fgets(lineptr, LINESIZE, data->file);
                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:87:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
       fgets(lineptr, LINESIZE, data->file);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Deferred.cpp -o build/temp.linux-armhf-2.7/layer0/Deferred.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Err.cpp -o build/temp.linux-armhf-2.7/layer0/Err.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:39:
contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:44:27: warning: function declaration isn't a prototype [-Wstrict-prototypes]
 static vasp_plugindata_t *vasp_plugindata_malloc()
                           ^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c: In function 'read_vaspxdatcar_timestep':
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:283:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, data->file);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c: In function 'read_vaspxdatcar_structure':
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:228:27: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   for (i = 0; i < 4; ++i) fgets(lineptr, LINESIZE, data->file);
                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:233:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(lineptr, LINESIZE, data->file);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:237:32: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
       for (i = 0; i < 2; ++i)  fgets(lineptr, LINESIZE, data->file);
                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:252:44: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   for (i = 0; i < 10 - data->version; ++i) fgets(lineptr, LINESIZE, data->file);
                                            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c: In function 'open_vaspxdatcar_read':
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:89:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, poscar);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:92:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, poscar);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:97:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(lineptr, LINESIZE, poscar);
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:111:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(lineptr, LINESIZE, poscar);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:121:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
       fgets(lineptr, LINESIZE, poscar);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Feedback.cpp -o build/temp.linux-armhf-2.7/layer0/Feedback.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:46:
contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:44:27: warning: function declaration isn't a prototype [-Wstrict-prototypes]
 static vasp_plugindata_t *vasp_plugindata_malloc()
                           ^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c: In function 'read_vaspxml_structure':
contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:139:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
       fgets(lineptr, LINESIZE, data->file);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:144:9: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
         fgets(lineptr, LINESIZE, data->file);
         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c: In function 'open_vaspxml_read':
contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:86:8: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
        fgets(lineptr, LINESIZE, data->file);
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:92:8: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
        fgets(lineptr, LINESIZE, data->file);
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Field.cpp -o build/temp.linux-armhf-2.7/layer0/Field.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c: In function 'vtf_read_bonds':
contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:147:48: warning: '%s' directive argument is null [-Wformat-overflow=]
   sprintf(message, "vtfplugin:%d: error: %s: \"%s\"\n",
                                                ^~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp: In function 'int read_vtk_data_ex(void*, molfile_volumetric_readwrite_t*)':
contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:371:15: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
         fscanf(fd, "%lf %lf %lf", &vx, &vy, &vz);
         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp: In function 'int read_vtk_data(void*, int, float*, float*)':
contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:306:15: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
         fscanf(fd, "%lf %lf %lf", &vx, &vy, &vz);
         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function 'int read_xbgf_timestep(void*, int, molfile_timestep_t*)':
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:288:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, bgf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:297:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, bgf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function 'int read_xbgf_bonds_aux(void*, int*, int**, int**, float**)':
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:365:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, bgf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:387:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, LINESIZE, bgf->file);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:395:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(nextline, LINESIZE, bgf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:455:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, LINESIZE, bgf->file);
         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function 'int read_xbgf_structure(void*, int*, molfile_atom_t*)':
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:241:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, bgf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:250:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, bgf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function 'void* open_xbgf_read(const char*, const char*, int*)':
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:72:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, fd);
     ~~~~~^~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/File.cpp -o build/temp.linux-armhf-2.7/layer0/File.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/GenericBuffer.cpp -o build/temp.linux-armhf-2.7/layer0/GenericBuffer.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp: In function 'int read_edm_data(void*, int, float*, float*)':
contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:240:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(readbuf, 13, edm->fd);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp: In function 'void eatline(FILE*)':
contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:44:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(readbuf, 1024, fd);    // go on to next line
   ~~~~~^~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function 'void eatline(FILE*)':
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:238:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(readbuf, 1024, fd);    // go on to next line
   ~~~~~^~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function 'void* open_xsf_read(const char*, const char*, int*)':
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:408:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(readbuf, 256, xsf->fd);
         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:442:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(readbuf, 256, xsf->fd);
               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:444:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(readbuf, 256, xsf->fd);
               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:446:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(readbuf, 256, xsf->fd);
               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:448:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(readbuf, 256, xsf->fd);
               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:450:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(readbuf, 256, xsf->fd);
               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:473:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(readbuf, 256, xsf->fd);
                 ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:508:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(readbuf, 256, xsf->fd);
           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp: In function 'int read_mdf_bonds(void*, int*, int**, int**, float**, int**, int*, char***)':
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:278:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, mdf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:297:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, LINESIZE, mdf->file);
       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:319:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, mdf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:357:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, LINESIZE, mdf->file);
       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp: In function 'int read_mdf_structure(void*, int*, molfile_atom_t*)':
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:223:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, mdf->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:241:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, LINESIZE, mdf->file);
       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp: In function 'void* open_mdf_read(const char*, const char*, int*)':
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:164:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, fd);
     ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:176:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, fd);
     ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:183:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, LINESIZE, fd);
       ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp: In function 'void* open_fs4_read(const char*, const char*, int*)':
contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:79:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(&dataBegin, sizeof(int), 1, fd);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function 'int read_mol2_timestep(void*, int, molfile_timestep_t*)':
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:275:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, mol2->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:289:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, mol2->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function 'int read_mol2_bonds_aux(void*, int*, int**, int**, float**)':
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:199:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, mol2->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:209:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, mol2->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function 'int read_mol2(void*, int*, molfile_atom_t*)':
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:127:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, mol2->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:138:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, mol2->file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function 'void* open_mol2_read(const char*, const char*, int*)':
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:74:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, LINESIZE, fd);
     ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:81:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, LINESIZE, fd);  // Read and ignore the mol_name
   ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:82:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, LINESIZE, fd);  // Read the molecule info
   ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:91:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, LINESIZE, fd);  // Read and ignore the mol_type
   ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:92:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, LINESIZE, fd);  // Read the charge_type
   ~~~~~^~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
In file included from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:160:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:437:18: warning: function declaration isn't a prototype [-Wstrict-prototypes]
 static qmdata_t* init_qmdata() {
                  ^~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function 'have_gamess':
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1106:8: warning: variable 'word' set but not used [-Wunused-but-set-variable]
   char word[3][BUFSIZ];
        ^~~~
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function 'get_basis_stats':
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:2264:8: warning: variable 'word' set but not used [-Wunused-but-set-variable]
   char word[7][BUFSIZ];
        ^~~~
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function 'get_wavefunction':
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:3573:8: warning: variable 'word' set but not used [-Wunused-but-set-variable]
   char word[6][BUFSIZ];
        ^~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:160:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function 'eatline':
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:840:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(readbuf, 1024, fd);
     ^~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Block.cpp -o build/temp.linux-armhf-2.7/layer0/Block.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
In file included from contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:49:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:437:18: warning: function declaration isn't a prototype [-Wstrict-prototypes]
 static qmdata_t* init_qmdata() {
                  ^~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c: In function 'read_molden_rundata':
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:596:25: warning: variable 'hessian_data' set but not used [-Wunused-but-set-variable]
   molfile_qm_hessian_t *hessian_data;
                         ^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c: In function 'count_orbitals':
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:1165:3: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(data->file, " Ene= %f\n", &orbenergy);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:1166:3: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(data->file, " Spin= %s\n", spin);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:1167:3: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(data->file, " Occup= %f\n", &occu);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:49:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function 'eatline':
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:840:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(readbuf, 1024, fd);
     ^~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c: In function 'open_molden_read':
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:224:11: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(data->file, "%d", &natm);
           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function 'get_basis_options':
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1398:41: warning: '%s' directive writing up to 8191 bytes into a region of size 8190 [-Wformat-overflow=]
       sprintf(data->basis_string, "%d-%s%sG%s",
                                         ^~
               ngauss, (data->gbasis+1), diffuse,
                                         ~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:27,
                 from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:160:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:10: note: '__builtin___sprintf_chk' output 4 or more bytes (assuming 16386) into a destination of size 8192
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1394:43: warning: '%s' directive writing up to 8191 bytes into a region of size between 8176 and 8186 [-Wformat-overflow=]
       sprintf(data->basis_string, "STO-%dG%s%s",
                                           ^~
               ngauss, diffuse, polarization);
                       ~~~~~~~              
In file included from /usr/include/stdio.h:862,
                 from contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:27,
                 from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:160:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:10: note: '__builtin___sprintf_chk' output between 7 and 16399 bytes into a destination of size 8192
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/GraphicsUtil.cpp -o build/temp.linux-armhf-2.7/layer0/GraphicsUtil.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp: In function 'int read_rawgraphics(void*, int*, const molfile_graphics_t**)':
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:91:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, 80, infile);
     ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:116:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, 80, infile);
     ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:132:9: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fgets(line, 80, infile);
    ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:149:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
      fgets(line, 80, infile);
      ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:155:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(line, 80, infile);
               ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:161:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
      fgets(line, 80, infile); //one more read to keep us in sync
      ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:170:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                      fgets(line, 80, infile);
                      ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:217:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fgets(line, 80, infile);
          ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:237:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                  fgets(line, 80, infile);
                  ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:256:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fgets(line, 80, infile);
          ~~~~~^~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Crystal.cpp -o build/temp.linux-armhf-2.7/layer0/Crystal.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Isosurf.cpp -o build/temp.linux-armhf-2.7/layer0/Isosurf.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c: In function 'read_next_timestep':
contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c:103:10: warning: variable 'numatoms' set but not used [-Wunused-but-set-variable]
   int i, numatoms;
          ^~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c: In function 'open_namdbin_read':
contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c:78:3: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
   fread(&filen, sizeof(namdbin_int32), 1, fd);
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/offplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp: In function 'int read_parm7_structure(void*, int*, molfile_atom_t*)':
contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp:78:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(buf, 85, file);
         ~~~~~^~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp:25:
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function 'int parse_parm7_atoms(const char*, int, molfile_atom_t*, FILE*)':
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:204:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(buf, 85, file);
       ~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function 'int parse_parm7_atype(const char*, int, molfile_atom_t*, FILE*)':
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:257:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(buf, 85, file);
       ~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function 'int parse_parm7_resnames(const char*, int, char*, FILE*)':
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:275:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(buf, 85, file);
       ~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function 'int parse_parm7_respointers(const char*, int, molfile_atom_t*, int, const char*, FILE*)':
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:289:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(file, " %d", &cur);
   ~~~~~~^~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function 'parmstruct* read_parm7_header(FILE*)':
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:368:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(sdum, 512, file);
   ~~~~~^~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:371:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(file, "%s\n", sdum); // "%FLAG"
   ~~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:378:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(file, "%s\n", sdum); // "TITLE" or "CTITLE"
   ~~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:385:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(file, "%s\n", sdum); // "FORMAT (20a4)"
   ~~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:399:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(prm->title, sizeof(prm->title), file);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:427:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(sdum, sizeof(sdum), file);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:439:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(file,parm7,
   ~~~~~~^~~~~~~~~~~~
          &prm->Natom,  &prm->Ntypes, &prm->Nbonh, &prm->Nbona,
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
          &prm->Ntheth, &prm->Ntheta, &prm->Nphih, &prm->Nphia,
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
          &prm->Jparm,  &prm->Nparm);
          ~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:443:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(file, parm7,
   ~~~~~~^~~~~~~~~~~~~
          &prm->Nnb,   &prm->Nres,   &prm->Mbona,  &prm->Mtheta,
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
          &prm->Mphia, &prm->Numbnd, &prm->Numang, &prm->Mptra,
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
          &prm->Natyp, &prm->Nphb);
          ~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:447:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(file, parm7,  &prm->Ifpert, &prm->Nbper,  &prm->Ngper,
   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
          &prm->Ndper, &prm->Mbper,  &prm->Mgper, &prm->Mdper,
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
          &prm->IfBox, &prm->Nmxrs,  &prm->IfCap);
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:451:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(file,"%8d",&prm->Numextra); //BB
   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function 'int read_parm7_flag(FILE*, const char*, const char*)':
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:79:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(file, "%s\n", buf);
   ~~~~~~^~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:87:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(file, "%s\n", buf);
   ~~~~~~^~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:97:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(file, "%s\n", buf);
   ~~~~~~^~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
In file included from contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp:24:
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h: In member function 'int {anonymous}::ReadPARM::readparm(FILE*)':
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:435:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &prm->Charges[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:444:10: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
    fscanf(file, " " DBLFMT, &prm->Masses[i]);
    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:510:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &prm->Rk[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:517:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &prm->Req[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:524:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &prm->Tk[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:531:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &prm->Teq[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:538:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &prm->Pk[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:545:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &prm->Pn[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:552:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &prm->Phase[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:559:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &prm->Solty[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:567:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &prm->Cn1[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:575:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &prm->Cn2[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:756:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &prm->HB12[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:763:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &prm->HB6[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:771:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
           fscanf(file, " " DBLFMT, &H[i]);
           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:853:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(file, " " DBLFMT " " DBLFMT " " DBLFMT,
   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     &prm->Box[0], &prm->Box[1], &prm->Box[2]);
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:867:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(file, " %d " DBLFMT " " DBLFMT " " DBLFMT " " DBLFMT,
   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     &prm->Natcap, &prm->Cutcap,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~
     &prm->Xcap, &prm->Ycap, &prm->Zcap);
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp: In function 'void line3(FILE*, GRASSP*)':
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:186:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(line3, 1, 80, infile);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp: In function 'int read_rawgraphics(void*, int*, const molfile_graphics_t**)':
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:284:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:285:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(line, 1, 80, infile);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:291:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:305:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:306:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(line, 1, 80, infile);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:307:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:311:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:313:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:318:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:319:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(line, 1, 80, infile);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:320:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:328:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:329:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(line, 1, 80, infile);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:330:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:354:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:355:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(vertex, 3 * sizeof(float), nvert, infile);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:356:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:357:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:358:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(access, 3 * sizeof(float), nvert, infile);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:359:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:360:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:361:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(normal, 3 * sizeof(float), nvert, infile);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:362:3: note: in expansion of macro 'TRASH'
   TRASH;
   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:371:5: note: in expansion of macro 'TRASH'
     TRASH;
     ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:372:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(triangle, 3 * sizeof(int), ntriangles, infile);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:373:5: note: in expansion of macro 'TRASH'
     TRASH;
     ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:374:5: note: in expansion of macro 'TRASH'
     TRASH;
     ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:375:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(properties, 3 * sizeof(float), nvert, infile);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:394:5: note: in expansion of macro 'TRASH'
     TRASH;
     ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:395:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(striangle, sizeof(short), 3 * ntriangles, infile);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:396:5: note: in expansion of macro 'TRASH'
     TRASH;
     ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 #define TRASH fread(trash, 4, 1, infile)
               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:397:5: note: in expansion of macro 'TRASH'
     TRASH;
     ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:398:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(properties, sizeof(float), 3 * nvert, infile);
     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Debug.cpp -o build/temp.linux-armhf-2.7/layer0/Debug.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Parse.cpp -o build/temp.linux-armhf-2.7/layer0/Parse.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Pixmap.cpp -o build/temp.linux-armhf-2.7/layer0/Pixmap.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp: In function 'void* open_grid_read(const char*, const char*, int*)':
contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp:84:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fread(&dataBegin, sizeof(int), 1, fd);
   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
In file included from contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp:30:
contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h: In function 'int mdio_readline(md_file*, char*, int, int)':
contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:426:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fgets(buf, n, mf->f);
  ~~~~~^~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Queue.cpp -o build/temp.linux-armhf-2.7/layer0/Queue.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/ShaderMgr.cpp -o build/temp.linux-armhf-2.7/layer0/ShaderMgr.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/os_gl.cpp -o build/temp.linux-armhf-2.7/layer0/os_gl.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Basis.cpp -o build/temp.linux-armhf-2.7/layer1/Basis.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/ButMode.cpp -o build/temp.linux-armhf-2.7/layer1/ButMode.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/hash.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/hash.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/inthash.c -o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/inthash.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/FontGLUTHel12.cpp -o build/temp.linux-armhf-2.7/layer1/FontGLUTHel12.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/FontGLUTHel18.cpp -o build/temp.linux-armhf-2.7/layer1/FontGLUTHel18.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/FontType.cpp -o build/temp.linux-armhf-2.7/layer1/FontType.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Map.cpp -o build/temp.linux-armhf-2.7/layer0/Map.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/CGO.cpp -o build/temp.linux-armhf-2.7/layer1/CGO.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Movie.cpp -o build/temp.linux-armhf-2.7/layer1/Movie.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Match.cpp -o build/temp.linux-armhf-2.7/layer0/Match.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Matrix.cpp -o build/temp.linux-armhf-2.7/layer0/Matrix.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer1/Movie.cpp: In function 'int MovieRelease(Block*, int, int, int, int)':
layer1/Movie.cpp:1755:24: warning: '%s' directive writing up to 1023 bytes into a region of size between 972 and 992 [-Wformat-overflow=]
         sprintf(buffer,"cmd.mview('clear',first=%d,last=%d%s)",
                        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                 1 + min_frame, 1 + max_frame, extra);
                                               ~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer1/Movie.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 34 and 1077 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Movie.cpp:1741:24: warning: '%s' directive writing up to 1023 bytes into a region of size between 989 and 1009 [-Wformat-overflow=]
         sprintf(buffer,"cmd.mcopy(%d,%d,%d%s)", 1+I->DragCurFrame, 1+I->DragStartFrame, 1, extra);
                        ^~~~~~~~~~~~~~~~~~~~~~~                                             ~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer1/Movie.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 17 and 1060 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Movie.cpp:1770:26: warning: '%s' directive writing up to 1023 bytes into a region of size between 991 and 1009 [-Wformat-overflow=]
           sprintf(buffer,"cmd.mdelete(%d,%d%s)", I->DragStartFrame - I->DragCurFrame, first+1, extra);
                          ^~~~~~~~~~~~~~~~~~~~~~                                                ~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer1/Movie.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 17 and 1058 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Movie.cpp:1766:26: warning: '%s' directive writing up to 1023 bytes into a region of size between 991 and 1009 [-Wformat-overflow=]
           sprintf(buffer,"cmd.minsert(%d,%d%s)", I->DragCurFrame - I->DragStartFrame, first, extra);
                          ^~~~~~~~~~~~~~~~~~~~~~                                              ~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer1/Movie.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 17 and 1058 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Movie.cpp:1727:24: warning: '%s' directive writing up to 1023 bytes into a region of size between 990 and 1009 [-Wformat-overflow=]
         sprintf(buffer,"cmd.mmove(%d,%d,%d%s)", 1+I->DragCurFrame, 1+I->DragStartFrame, 1, extra);
                        ^~~~~~~~~~~~~~~~~~~~~~~                                             ~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer1/Movie.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 17 and 1059 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Movie.cpp: In function 'void MovieModalPNG(PyMOLGlobals*, CMovie*, CMovieModal*)':
layer1/Movie.cpp:803:11: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 221 [-Wformat-truncation=]
           " MoviePNG-Error: unable to write '%s'\n", M->fname ENDFB(G);
           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer1/Movie.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 37 and 1060 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Ortho.cpp -o build/temp.linux-armhf-2.7/layer1/Ortho.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/ShaderPrg.cpp -o build/temp.linux-armhf-2.7/layer0/ShaderPrg.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/P.cpp -o build/temp.linux-armhf-2.7/layer1/P.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/MemoryCache.cpp -o build/temp.linux-armhf-2.7/layer0/MemoryCache.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/MemoryDebug.cpp -o build/temp.linux-armhf-2.7/layer0/MemoryDebug.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/MyPNG.cpp -o build/temp.linux-armhf-2.7/layer0/MyPNG.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Sphere.cpp -o build/temp.linux-armhf-2.7/layer0/Sphere.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/SceneRender.cpp -o build/temp.linux-armhf-2.7/layer1/SceneRender.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Tetsurf.cpp -o build/temp.linux-armhf-2.7/layer0/Tetsurf.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/PConv.cpp -o build/temp.linux-armhf-2.7/layer1/PConv.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer1/PConv.cpp:38: warning: "PyString_Check" redefined
 #define PyString_Check(o) (PyBytes_CheckExact(o) || PyUnicode_Check(o))
 
In file included from /usr/include/python2.7/Python.h:97,
                 from layer0/os_python.h:34,
                 from layer1/PConv.cpp:17:
/usr/include/python2.7/stringobject.h:58: note: this is the location of the previous definition
 #define PyString_Check(op) \
 
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/ScrollBar.cpp -o build/temp.linux-armhf-2.7/layer1/ScrollBar.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Texture.cpp -o build/temp.linux-armhf-2.7/layer0/Texture.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Seq.cpp -o build/temp.linux-armhf-2.7/layer1/Seq.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Pop.cpp -o build/temp.linux-armhf-2.7/layer1/Pop.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/PyMOLObject.cpp -o build/temp.linux-armhf-2.7/layer1/PyMOLObject.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Tracker.cpp -o build/temp.linux-armhf-2.7/layer0/Tracker.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Triangle.cpp -o build/temp.linux-armhf-2.7/layer0/Triangle.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Setting.cpp -o build/temp.linux-armhf-2.7/layer1/Setting.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Ray.cpp -o build/temp.linux-armhf-2.7/layer1/Ray.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Util.cpp -o build/temp.linux-armhf-2.7/layer0/Util.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Util2.cpp -o build/temp.linux-armhf-2.7/layer0/Util2.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Vector.cpp -o build/temp.linux-armhf-2.7/layer0/Vector.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer1/Ray.cpp: In function 'void RayRenderVRML2(CRay*, int, int, char**, float, float, float, float, float)':
layer1/Ray.cpp:1549:19: warning: '%s' directive writing up to 1023 bytes into a region of size between 0 and 914 [-Wformat-overflow=]
                   "Transform {\n"
                   ^~~~~~~~~~~~~~~
                   " translation %8.6f %8.6f %8.6f\n"
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                   " rotation %8.6f %8.6f %8.6f %8.6f\n"
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                   " children [\n"
                   ~~~~~~~~~~~~~~~
                   "%s"
                   ~~~~
                   " ]\n"
                   ~~~~~~
                   "}\n",
                   ~~~~~
layer1/Ray.cpp:1558:72:
                   vert2[2] - mid[2], axis[0], axis[1], axis[2], angle, geometry);
                                                                        ~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer1/Ray.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 116 and 2993 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/COLLADA.cpp -o build/temp.linux-armhf-2.7/layer1/COLLADA.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer0/Word.cpp -o build/temp.linux-armhf-2.7/layer0/Word.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/CifFile.cpp -o build/temp.linux-armhf-2.7/layer2/CifFile.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Character.cpp -o build/temp.linux-armhf-2.7/layer1/Character.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/CifMoleculeReader.cpp -o build/temp.linux-armhf-2.7/layer2/CifMoleculeReader.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Color.cpp -o build/temp.linux-armhf-2.7/layer1/Color.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Rep.cpp -o build/temp.linux-armhf-2.7/layer1/Rep.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Scene.cpp -o build/temp.linux-armhf-2.7/layer1/Scene.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Control.cpp -o build/temp.linux-armhf-2.7/layer1/Control.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer1/Scene.cpp: In function 'int SceneClick(Block*, int, int, int, int, double)':
layer1/Scene.cpp:4103:22: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 242 [-Wformat-truncation=]
               PRINTF " You clicked %s", buffer ENDF(G);
                      ^~~~~~~~~~~~~~~~~  ~~~~~~
In file included from layer1/Ortho.h:30,
                 from layer1/Scene.h:23,
                 from layer1/Scene.cpp:32:
layer0/Feedback.h:265:53: note: 'snprintf' output between 14 and 1037 bytes into a destination of size 255
 #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
                                                     ^
layer1/Scene.cpp:4103:15: note: in expansion of macro 'PRINTF'
               PRINTF " You clicked %s", buffer ENDF(G);
               ^~~~~~
layer1/Scene.cpp:3971:20: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 242 [-Wformat-truncation=]
             PRINTF " You clicked %s -> (%s)", buffer, cEditorSele1 ENDF(G);
                    ^~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~~~
In file included from layer1/Ortho.h:30,
                 from layer1/Scene.h:23,
                 from layer1/Scene.cpp:32:
layer0/Feedback.h:265:53: note: 'snprintf' output between 23 and 1046 bytes into a destination of size 255
 #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
                                                     ^
layer1/Scene.cpp:3971:13: note: in expansion of macro 'PRINTF'
             PRINTF " You clicked %s -> (%s)", buffer, cEditorSele1 ENDF(G);
             ^~~~~~
layer1/Scene.cpp:3988:22: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 242 [-Wformat-truncation=]
               PRINTF " You clicked %s -> (%s)", buffer, cEditorSele2 ENDF(G);
                      ^~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~~~
In file included from layer1/Ortho.h:30,
                 from layer1/Scene.h:23,
                 from layer1/Scene.cpp:32:
layer0/Feedback.h:265:53: note: 'snprintf' output between 23 and 1046 bytes into a destination of size 255
 #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
                                                     ^
layer1/Scene.cpp:3988:15: note: in expansion of macro 'PRINTF'
               PRINTF " You clicked %s -> (%s)", buffer, cEditorSele2 ENDF(G);
               ^~~~~~
layer1/Scene.cpp:3996:31: warning: '%s' directive writing up to 1023 bytes into a region of size 1014 [-Wformat-overflow=]
               sprintf(buffer, "cmd.edit(\"%s\",\"%s\")", buf1, buf2);
                               ^~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
layer1/Scene.cpp:3996:22: note: 'sprintf' output between 16 and 2062 bytes into a destination of size 1024
               sprintf(buffer, "cmd.edit(\"%s\",\"%s\")", buf1, buf2);
               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Scene.cpp:3856:24: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 242 [-Wformat-truncation=]
                 PRINTF " You clicked %s -> (%s)\n", buffer, cEditorSele1 ENDF(G);
                        ^~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~~~
In file included from layer1/Ortho.h:30,
                 from layer1/Scene.h:23,
                 from layer1/Scene.cpp:32:
layer0/Feedback.h:265:53: note: 'snprintf' output between 24 and 1047 bytes into a destination of size 255
 #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
                                                     ^
layer1/Scene.cpp:3856:17: note: in expansion of macro 'PRINTF'
                 PRINTF " You clicked %s -> (%s)\n", buffer, cEditorSele1 ENDF(G);
                 ^~~~~~
layer1/Scene.cpp:3862:31: warning: '%s' directive writing up to 1023 bytes into a region of size 1014 [-Wformat-overflow=]
                 sprintf(buf2, "cmd.edit(\"%s\",pkresi=1)", buffer);
                               ^~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~~~
layer1/Scene.cpp:3862:24: note: 'sprintf' output between 22 and 1045 bytes into a destination of size 1024
                 sprintf(buf2, "cmd.edit(\"%s\",pkresi=1)", buffer);
                 ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Scene.cpp:3891:24: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=]
                 PRINTF " You unpicked %s.", buffer ENDF(G);
                        ^~~~~~~~~~~~~~~~~~~  ~~~~~~
In file included from layer1/Ortho.h:30,
                 from layer1/Scene.h:23,
                 from layer1/Scene.cpp:32:
layer0/Feedback.h:265:53: note: 'snprintf' output between 16 and 1039 bytes into a destination of size 255
 #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
                                                     ^
layer1/Scene.cpp:3891:17: note: in expansion of macro 'PRINTF'
                 PRINTF " You unpicked %s.", buffer ENDF(G);
                 ^~~~~~
layer1/Scene.cpp:3904:50: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 242 [-Wformat-truncation=]
                 PRINTFB(G, FB_Scene, FB_Results) " You clicked %s -> (%s)\n", buffer,
                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~~~
In file included from layer1/Ortho.h:30,
                 from layer1/Scene.h:23,
                 from layer1/Scene.cpp:32:
layer0/Feedback.h:262:98: note: 'snprintf' output between 21 and 1299 bytes into a destination of size 255
 #define PRINTFB(G,sysmod,mask) { FeedbackLineType _FBstr; if(Feedback(G,sysmod,mask)) {(snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
                                                                                                  ^
layer1/Scene.cpp:3904:17: note: in expansion of macro 'PRINTFB'
                 PRINTFB(G, FB_Scene, FB_Results) " You clicked %s -> (%s)\n", buffer,
                 ^~~~~~~
layer1/Scene.cpp:4162:20: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 242 [-Wformat-truncation=]
             PRINTF " You clicked %s", buffer ENDF(G);
                    ^~~~~~~~~~~~~~~~~  ~~~~~~
In file included from layer1/Ortho.h:30,
                 from layer1/Scene.h:23,
                 from layer1/Scene.cpp:32:
layer0/Feedback.h:265:53: note: 'snprintf' output between 14 and 1037 bytes into a destination of size 255
 #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
                                                     ^
layer1/Scene.cpp:4162:13: note: in expansion of macro 'PRINTF'
             PRINTF " You clicked %s", buffer ENDF(G);
             ^~~~~~
layer1/Scene.cpp:4196:31: warning: '%s' directive writing up to 1023 bytes into a region of size 1004 [-Wformat-overflow=]
               sprintf(buffer, "cmd.drag(\"byobject (%s)\")", buf1);
                               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
layer1/Scene.cpp:4196:22: note: 'sprintf' output between 24 and 1047 bytes into a destination of size 1024
               sprintf(buffer, "cmd.drag(\"byobject (%s)\")", buf1);
               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Scene.cpp:4187:31: warning: '%s' directive writing up to 1023 bytes into a region of size 1007 [-Wformat-overflow=]
               sprintf(buffer, "cmd.drag(\"bymol (%s)\")", buf1);
                               ^~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
layer1/Scene.cpp:4187:22: note: 'sprintf' output between 21 and 1044 bytes into a destination of size 1024
               sprintf(buffer, "cmd.drag(\"bymol (%s)\")", buf1);
               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Scene.cpp:4247:31: warning: '%s' directive writing up to 1023 bytes into a region of size 1012 [-Wformat-overflow=]
               sprintf(buffer, "cmd.center(\"%s\",state=%d)", buf1, I->LastPicked.context.state + 1);
                               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
layer1/Scene.cpp:4247:31: note: directive argument in the range [-2147483647, 2147483647]
layer1/Scene.cpp:4247:22: note: 'sprintf' output between 23 and 1056 bytes into a destination of size 1024
               sprintf(buffer, "cmd.center(\"%s\",state=%d)", buf1, I->LastPicked.context.state + 1);
               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Scene.cpp:4218:33: warning: '%s' directive writing up to 1023 bytes into a region of size 1012 [-Wformat-overflow=]
                 sprintf(buffer, "cmd.origin(\"%s\")", buf1);
                                 ^~~~~~~~~~~~~~~~~~~~  ~~~~
layer1/Scene.cpp:4218:24: note: 'sprintf' output between 15 and 1038 bytes into a destination of size 1024
                 sprintf(buffer, "cmd.origin(\"%s\")", buf1);
                 ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Scene.cpp:4225:24: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 242 [-Wformat-truncation=]
                 PRINTF " You clicked %s", buffer ENDF(G);
                        ^~~~~~~~~~~~~~~~~  ~~~~~~
In file included from layer1/Ortho.h:30,
                 from layer1/Scene.h:23,
                 from layer1/Scene.cpp:32:
layer0/Feedback.h:265:53: note: 'snprintf' output between 14 and 1037 bytes into a destination of size 255
 #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
                                                     ^
layer1/Scene.cpp:4225:17: note: in expansion of macro 'PRINTF'
                 PRINTF " You clicked %s", buffer ENDF(G);
                 ^~~~~~
layer1/Scene.cpp:4312:29: warning: ')' directive writing 1 byte into a region of size between 0 and 1023 [-Wformat-overflow=]
               sprintf(buf2, "%s(%s)", sel_mode_kw, buffer);
                             ^~~~~~~~
layer1/Scene.cpp:4312:22: note: 'sprintf' output 3 or more bytes (assuming 1026) into a destination of size 1024
               sprintf(buf2, "%s(%s)", sel_mode_kw, buffer);
               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Scene.cpp:4319:35: warning: '%s' directive writing up to 1023 bytes into a region of size between 753 and 1008 [-Wformat-overflow=]
                   sprintf(buffer, "cmd.select('%s',\"%s(%s)\")", selName, sel_mode_kw,
                                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                           buf1);
                           ~~~~     
layer1/Scene.cpp:4319:26: note: 'sprintf' output 20 or more bytes (assuming 1298) into a destination of size 1024
                   sprintf(buffer, "cmd.select('%s',\"%s(%s)\")", selName, sel_mode_kw,
                   ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                           buf1);
                           ~~~~~
layer1/Scene.cpp:4294:29: warning: '%s' directive writing up to 1023 bytes into a region of size between 760 and 1015 [-Wformat-overflow=]
               sprintf(buf2, "(((%s) or %s(%s)) and not ((%s(%s)) and %s(%s)))",
                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                       selName, sel_mode_kw, buffer, sel_mode_kw, buffer, sel_mode_kw,
                                             ~~~~~~
layer1/Scene.cpp:4294:22: note: 'sprintf' output 35 or more bytes (assuming 2591) into a destination of size 1024
               sprintf(buf2, "(((%s) or %s(%s)) and not ((%s(%s)) and %s(%s)))",
               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                       selName, sel_mode_kw, buffer, sel_mode_kw, buffer, sel_mode_kw,
                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                       selName);
                       ~~~~~~~~
layer1/Scene.cpp:4303:33: warning: '%s' directive writing up to 1023 bytes into a region of size between 760 and 1015 [-Wformat-overflow=]
                   sprintf(buf2, "(((%s) or %s(%s)) and not ((%s(%s)) and %s(%s)))",
                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                           selName, sel_mode_kw, buffer, sel_mode_kw, buffer, sel_mode_kw,
                                                 ~~~~~~
layer1/Scene.cpp:4303:26: note: 'sprintf' output 35 or more bytes (assuming 2591) into a destination of size 1024
                   sprintf(buf2, "(((%s) or %s(%s)) and not ((%s(%s)) and %s(%s)))",
                   ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                           selName, sel_mode_kw, buffer, sel_mode_kw, buffer, sel_mode_kw,
                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                           selName);
                           ~~~~~~~~
layer1/Scene.cpp:4306:35: warning: '%s' directive writing up to 1023 bytes into a region of size between 753 and 1008 [-Wformat-overflow=]
                   sprintf(buffer, "cmd.select('%s',\"%s(%s)\",enable=1)", selName,
                                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                           sel_mode_kw, buf2);
                                        ~~~~
layer1/Scene.cpp:4306:26: note: 'sprintf' output 29 or more bytes (assuming 1307) into a destination of size 1024
                   sprintf(buffer, "cmd.select('%s',\"%s(%s)\",enable=1)", selName,
                   ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                           sel_mode_kw, buf2);
                           ~~~~~~~~~~~~~~~~~~
layer1/Scene.cpp:4271:27: warning: '%s' directive writing up to 1023 bytes into a region of size 1022 [-Wformat-overflow=]
             sprintf(buf2, "(%s(%s))", sel_mode_kw, buffer);
                           ^~~~~~~~~~               ~~~~~~
layer1/Scene.cpp:4271:20: note: 'sprintf' output 5 or more bytes (assuming 1028) into a destination of size 1024
             sprintf(buf2, "(%s(%s))", sel_mode_kw, buffer);
             ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Scene.cpp:4282:33: warning: '%s' directive writing up to 1023 bytes into a region of size between 753 and 1008 [-Wformat-overflow=]
                 sprintf(buffer, "cmd.select('%s',\"%s(%s)\",enable=1)", selName,
                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                         sel_mode_kw, buf1);
                                      ~~~~
layer1/Scene.cpp:4282:24: note: 'sprintf' output 29 or more bytes (assuming 1307) into a destination of size 1024
                 sprintf(buffer, "cmd.select('%s',\"%s(%s)\",enable=1)", selName,
                 ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                         sel_mode_kw, buf1);
                         ~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Extrude.cpp -o build/temp.linux-armhf-2.7/layer1/Extrude.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/ScenePicking.cpp -o build/temp.linux-armhf-2.7/layer1/ScenePicking.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/CoordSet.cpp -o build/temp.linux-armhf-2.7/layer2/CoordSet.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Font.cpp -o build/temp.linux-armhf-2.7/layer1/Font.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/SceneRay.cpp -o build/temp.linux-armhf-2.7/layer1/SceneRay.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/FontGLUT.cpp -o build/temp.linux-armhf-2.7/layer1/FontGLUT.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer2/CoordSet.cpp: In member function 'void CoordSet::update(int)':
layer2/CoordSet.cpp:1211:39: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 223 [-Wformat-truncation=]
   PRINTFB(G, FB_CoordSet, FB_Blather) " CoordSetUpdate-Entered: object %s state %d cset %p\n",
                                       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/DistSet.cpp -o build/temp.linux-armhf-2.7/layer2/DistSet.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/FontGLUT8x13.cpp -o build/temp.linux-armhf-2.7/layer1/FontGLUT8x13.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/FontGLUT9x15.cpp -o build/temp.linux-armhf-2.7/layer1/FontGLUT9x15.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/FontGLUTHel10.cpp -o build/temp.linux-armhf-2.7/layer1/FontGLUTHel10.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectGadget.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectGadget.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepDistDash.cpp -o build/temp.linux-armhf-2.7/layer2/RepDistDash.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/GadgetSet.cpp -o build/temp.linux-armhf-2.7/layer2/GadgetSet.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectGadgetRamp.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectGadgetRamp.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/HydrogenAdder.cpp -o build/temp.linux-armhf-2.7/layer2/HydrogenAdder.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepDistLabel.cpp -o build/temp.linux-armhf-2.7/layer2/RepDistLabel.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/MmodTyping.cpp -o build/temp.linux-armhf-2.7/layer2/MmodTyping.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Shaker.cpp -o build/temp.linux-armhf-2.7/layer1/Shaker.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectGroup.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectGroup.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepDot.cpp -o build/temp.linux-armhf-2.7/layer2/RepDot.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/MmtfMoleculeReader.cpp -o build/temp.linux-armhf-2.7/layer2/MmtfMoleculeReader.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectMap.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectMap.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Symmetry.cpp -o build/temp.linux-armhf-2.7/layer1/Symmetry.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/Mol2Typing.cpp -o build/temp.linux-armhf-2.7/layer2/Mol2Typing.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepEllipsoid.cpp -o build/temp.linux-armhf-2.7/layer2/RepEllipsoid.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Text.cpp -o build/temp.linux-armhf-2.7/layer1/Text.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/MolV3000.cpp -o build/temp.linux-armhf-2.7/layer2/MolV3000.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectAlignment.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectAlignment.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepLabel.cpp -o build/temp.linux-armhf-2.7/layer2/RepLabel.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer2/ObjectMap.cpp: In function 'int ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int)':
layer2/ObjectMap.cpp:4311:5: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=]
     " ObjectMap: %s\n", cc ENDFB(I->Obj.G);
     ^~~~~~~~~~~~~~~~~~  ~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMap.cpp:21:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 14 and 1037 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp:4311:5: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=]
     " ObjectMap: %s\n", cc ENDFB(I->Obj.G);
     ^~~~~~~~~~~~~~~~~~  ~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMap.cpp:21:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 14 and 1037 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function 'ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)':
layer2/ObjectMap.cpp:2983:7: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=]
       " PHIStrToMap: %s\n", cc ENDFB(I->Obj.G);
       ^~~~~~~~~~~~~~~~~~~~  ~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMap.cpp:21:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 16 and 1039 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp:2992:7: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=]
       " PHIStrToMap: %s\n", cc ENDFB(I->Obj.G);
       ^~~~~~~~~~~~~~~~~~~~  ~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMap.cpp:21:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 16 and 1039 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp:2998:7: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=]
       " PHIStrToMap: %s\n", cc ENDFB(I->Obj.G);
       ^~~~~~~~~~~~~~~~~~~~  ~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMap.cpp:21:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 16 and 1039 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp:3080:7: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=]
       " PHIStrToMap: %s\n", cc ENDFB(I->Obj.G);
       ^~~~~~~~~~~~~~~~~~~~  ~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMap.cpp:21:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 16 and 1039 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectCGO.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectCGO.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepMesh.cpp -o build/temp.linux-armhf-2.7/layer2/RepMesh.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectMesh.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectMesh.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectCallback.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectCallback.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer2/ObjectMesh.cpp: In function 'void ObjectMeshDump(ObjectMesh*, const char*, int)':
layer2/ObjectMesh.cpp:370:7: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=]
       " ObjectMeshDump: %s written to %s\n", I->Obj.Name, fname ENDFB(I->Obj.G);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMesh.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output 31 or more bytes (assuming 286) into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectMesh.cpp: In function 'void ObjectMeshUpdate(ObjectMesh*)':
layer2/ObjectMesh.cpp:550:11: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 226 [-Wformat-truncation=]
           "ObjectMeshUpdate-Error: map '%s' has been deleted.\n", ms->MapName
           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMesh.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 50 and 305 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectMesh.cpp:584:15: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 232 [-Wformat-truncation=]
               " ObjectMesh: updating \"%s\".\n", I->Obj.Name ENDFB(G);
               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMesh.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 27 and 282 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepNonbonded.cpp -o build/temp.linux-armhf-2.7/layer2/RepNonbonded.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectDist.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectDist.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectMolecule.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectMolecule.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepNonbondedSphere.cpp -o build/temp.linux-armhf-2.7/layer2/RepNonbondedSphere.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/Sculpt.cpp -o build/temp.linux-armhf-2.7/layer2/Sculpt.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer2/ObjectMolecule.cpp: In function 'const char* findflag(PyMOLGlobals*, const char*, const char*, const char*)':
layer2/ObjectMolecule.cpp:1525:9: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 194 [-Wformat-truncation=]
         " ObjectMolecule-Error: Unrecognized file format (can't find \"%s\").\n", pat
         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMolecule.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 66 and 1089 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectMolecule.cpp:1543:9: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 194 [-Wformat-truncation=]
         " ObjectMolecule-Error: Unrecognized file format (can't find \"%s\").\n", pat
         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMolecule.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 66 and 1089 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectMolecule.cpp: In function 'CoordSet* ObjectMoleculeMOLStr2CoordSet(PyMOLGlobals*, const char*, AtomInfoType**, const char**)':
layer2/ObjectMolecule.cpp:8024:5: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 224 [-Wformat-truncation=]
     " ObjMolMOLStr2CoordSet: title '%s'\n", nameTmp ENDFB(G)
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMolecule.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 34 and 289 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepRibbon.cpp -o build/temp.linux-armhf-2.7/layer2/RepRibbon.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/TypeFace.cpp -o build/temp.linux-armhf-2.7/layer1/TypeFace.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/View.cpp -o build/temp.linux-armhf-2.7/layer1/View.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepSphere.cpp -o build/temp.linux-armhf-2.7/layer2/RepSphere.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/SculptCache.cpp -o build/temp.linux-armhf-2.7/layer2/SculptCache.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer1/Wizard.cpp -o build/temp.linux-armhf-2.7/layer1/Wizard.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepSphereGenerate.cpp -o build/temp.linux-armhf-2.7/layer2/RepSphereGenerate.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/SideChainHelper.cpp -o build/temp.linux-armhf-2.7/layer2/SideChainHelper.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer2/ObjectMolecule.cpp: In function 'void ObjectMoleculeUpdate(ObjectMolecule*)':
layer2/ObjectMolecule.cpp:11293:15: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 181 and 191 [-Wformat-truncation=]
               " ObjectMolecule-DEBUG: updating representations for state %d of \"%s\".\n",
               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMolecule.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 68 and 333 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectMolecule.cpp: In function 'int ObjectMoleculeMoveAtom(ObjectMolecule*, int, int, float*, int, int)':
layer2/ObjectMolecule.cpp:11416:21: warning: '%s' directive writing up to 1023 bytes into a region of size 1004 [-Wformat-overflow=]
       sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n",
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
               buffer, v[0], v[1], v[2], state + 1, mode, 0);
               ~~~~~~ 
layer2/ObjectMolecule.cpp:11416:21: note: directive argument in the range [-2147483647, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMolecule.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 78 and 2036 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepSphereImmediate.cpp -o build/temp.linux-armhf-2.7/layer2/RepSphereImmediate.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/VFont.cpp -o build/temp.linux-armhf-2.7/layer2/VFont.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/AssemblyHelpers.cpp -o build/temp.linux-armhf-2.7/layer2/AssemblyHelpers.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer3/AtomIterators.cpp -o build/temp.linux-armhf-2.7/layer3/AtomIterators.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepSurface.cpp -o build/temp.linux-armhf-2.7/layer2/RepSurface.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/AtomInfo.cpp -o build/temp.linux-armhf-2.7/layer2/AtomInfo.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer3/CifDataValueFormatter.cpp -o build/temp.linux-armhf-2.7/layer3/CifDataValueFormatter.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer3/Editor.cpp -o build/temp.linux-armhf-2.7/layer3/Editor.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectMolecule2.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectMolecule2.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/AtomInfoHistory.cpp -o build/temp.linux-armhf-2.7/layer2/AtomInfoHistory.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer3/Editor.cpp: In function 'int EditorLogState(PyMOLGlobals*, int)':
layer3/Editor.cpp:588:23: warning: '%s' directive writing up to 1023 bytes into a region of size 1015 [-Wformat-overflow=]
       sprintf(buffer, "cmd.edit(%s,%s,%s,%s,pkresi=%d,pkbond=%d)",
                       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
               buf1, buf2, buf3, buf4, pkresi ? 1 : 0, pkbond ? 1 : 0);
               ~~~~     
layer3/Editor.cpp:588:23: note: directive argument in the range [0, 1]
layer3/Editor.cpp:588:23: note: directive argument in the range [0, 1]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Editor.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 32 and 4124 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Editor.cpp: In function 'void EditorHFill(PyMOLGlobals*, int)':
layer3/Editor.cpp:1027:20: warning: '%s' directive writing up to 1023 bytes into a region of size 1012 [-Wformat-overflow=]
    sprintf(buffer, "((neighbor (%s)) and hydro and not (%s))",
                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                   s2, s2);
                   ~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Editor.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 37 and 2083 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Editor.cpp: In function 'void EditorPrepareDrag(PyMOLGlobals*, CObject*, int, int, int, int)':
layer3/Editor.cpp:1903:9: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 236 [-Wformat-truncation=]
         " Editor: grabbing (%s).", name ENDFB(G);
         ^~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Editor.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 22 and 277 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Editor.cpp: In function 'void EditorDefineExtraPks(PyMOLGlobals*)':
layer3/Editor.cpp:338:21: warning: '%s' directive writing up to 255 bytes into a region of size 249 [-Wformat-overflow=]
     sprintf(buffer, "(byres %s)", name);
                     ^~~~~~~~~~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Editor.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 9 and 264 bytes into a destination of size 256
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Editor.cpp:340:21: warning: '%s' directive writing up to 255 bytes into a region of size 247 [-Wformat-overflow=]
     sprintf(buffer, "(bychain %s)", name);
                     ^~~~~~~~~~~~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Editor.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 11 and 266 bytes into a destination of size 256
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Editor.cpp:342:21: warning: '%s' directive writing up to 255 bytes into a region of size 246 [-Wformat-overflow=]
     sprintf(buffer, "(byobject %s)", name);
                     ^~~~~~~~~~~~~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Editor.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 12 and 267 bytes into a destination of size 256
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer3/Executive.cpp -o build/temp.linux-armhf-2.7/layer3/Executive.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer2/ObjectMolecule2.cpp: In function 'int ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, const char*, const char*, const char*, const char*, const char*, const char*, float, int, float, float, const char*, float*, int, int, int, int)':
layer2/ObjectMolecule2.cpp:308:9: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=]
         " ObjMol: created %s/%s/%s/%s`%d%c/%s\n",
         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMolecule2.cpp:20:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output 26 or more bytes (assuming 281) into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepWireBond.cpp -o build/temp.linux-armhf-2.7/layer2/RepWireBond.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/BondTypeHistory.cpp -o build/temp.linux-armhf-2.7/layer2/BondTypeHistory.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectSlice.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectSlice.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer4/Cmd.cpp -o build/temp.linux-armhf-2.7/layer4/Cmd.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer3/Executive.cpp: In function 'void ExecutiveRemoveAtoms(PyMOLGlobals*, const char*, int)':
layer3/Executive.cpp:9655:17: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 207 and 217 [-Wformat-truncation=]
                 " Remove: eliminated %d atoms in model \"%s\".\n",
                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 42 and 307 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'int ExecutiveBond(PyMOLGlobals*, const char*, const char*, int, int, int)':
layer3/Executive.cpp:10004:19: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 200 and 210 [-Wformat-truncation=]
                   " Valence: %d bond valences adjusted in model \"%s\".\n", cnt,
                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 49 and 314 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:9991:19: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 214 and 224 [-Wformat-truncation=]
                   " Bond: %d bonds added to model \"%s\".\n", cnt, rec->obj->Name
                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 35 and 300 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:10016:19: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 208 and 218 [-Wformat-truncation=]
                   " Unbond: %d bonds removed from model \"%s\".\n",
                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 41 and 306 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'int ExecutiveSetBondSettingFromString(PyMOLGlobals*, int, const char*, const char*, const char*, int, int, int)':
layer3/Executive.cpp:12098:17: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                 " Setting: %s set for %d bonds in object \"%s\".\n",
                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                 name, nSet, obj->Obj.Name ENDF(G);
                 ~~~~
layer3/Executive.cpp:12098:17: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 42 and 560 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'PyObject* ExecutiveGetBondSetting(PyMOLGlobals*, int, char*, const char*, int, int, int)':
layer3/Executive.cpp:12181:8: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
        " Getting: %s for %d bonds in object \"%s\".\n",
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        name, nSet, obj->Obj.Name ENDF(G);
        ~~~~
layer3/Executive.cpp:12181:8: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 38 and 556 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'int ExecutiveSetBondSetting(PyMOLGlobals*, int, PyObject*, const char*, const char*, int, int, int)':
layer3/Executive.cpp:12283:19: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                   " Setting: %s set for %d bonds in object \"%s\".\n",
                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                   name, nSet, obj->Obj.Name ENDF(G);
                   ~~~~
layer3/Executive.cpp:12283:19: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 42 and 560 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12302:7: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 236 [-Wformat-truncation=]
       " Setting-Warning: '%s' is not a bond-level setting\n", name
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 50 and 304 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'int ExecutiveUnsetBondSetting(PyMOLGlobals*, int, const char*, const char*, int, int, int)':
layer3/Executive.cpp:12359:15: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
               " Setting: %s unset for %d bonds in object \"%s\".\n",
               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
               name, nSet, rec->obj->Name ENDF(G);
               ~~~~
layer3/Executive.cpp:12359:15: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 44 and 562 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'int ExecutiveSetSetting(PyMOLGlobals*, int, PyObject*, const char*, int, int, int)':
layer3/Executive.cpp:12597:9: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 236 [-Wformat-truncation=]
         " Setting-Warning: '%s' is a %s-level setting\n", name, SettingLevelGetName(G, index)
         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output 42 or more bytes (assuming 296) into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12453:21: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                     " Setting: %s set to %s in %d objects, state %d.\n",
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                     name, value, nObj, state + 1 ENDF(G);
                     ~~~~
layer3/Executive.cpp:12453:21: note: directive argument in the range [1, 2147483647]
layer3/Executive.cpp:12453:21: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 43 and 1338 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12450:21: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                     " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G);
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
layer3/Executive.cpp:12450:21: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 34 and 1320 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12542:27: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                           " Setting: %s set for %d atoms in object \"%s\".\n",
                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                           name, op.i4, rec->obj->Name ENDF(G);
                           ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 42 and 561 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12542:27: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                           " Setting: %s set for %d atoms in object \"%s\".\n",
                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                           name, op.i4, rec->obj->Name ENDF(G);
                           ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 42 and 561 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12574:25: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                         " Setting: %s set to %s in object \"%s\", state %d.\n",
                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                         name, value, rec->obj->Name, state + 1 ENDF(G);
                         ~~~~
layer3/Executive.cpp:12574:25: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 43 and 1584 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12567:25: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                         " Setting: %s set to %s in object \"%s\".\n",
                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                         name, value, rec->obj->Name ENDF(G);
                         ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 34 and 1566 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12409:18: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
           PRINTF " Setting: %s set to %s.\n", name, value ENDF(G);
                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 21 and 1298 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'int ExecutiveSetSettingFromString(PyMOLGlobals*, int, const char*, const char*, int, int, int)':
layer3/Executive.cpp:12759:21: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                     " Setting: %s set to %s in %d objects, state %d.\n",
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                     name, value2, nObj, state + 1 ENDF(G);
                     ~~~~
layer3/Executive.cpp:12759:21: note: directive argument in the range [1, 2147483647]
layer3/Executive.cpp:12759:21: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 43 and 1338 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12756:21: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                     " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G);
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
layer3/Executive.cpp:12756:21: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 34 and 1320 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12791:25: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                         " Setting: %s set for %d atoms in object \"%s\".\n",
                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                         name, op.i4, rec->obj->Name ENDF(G);
                         ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 42 and 561 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12823:25: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                         " Setting: %s set to %s in object \"%s\", state %d.\n",
                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                         name, value2, rec->obj->Name, state + 1 ENDF(G);
                         ~~~~
layer3/Executive.cpp:12823:25: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 43 and 1584 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12815:25: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                         " Setting: %s set to %s in object \"%s\".\n",
                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                         name, value2, rec->obj->Name ENDF(G);
                         ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 34 and 1566 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12719:18: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
           PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G);
                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 21 and 1298 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'int ExecutiveSetObjSettingFromString(PyMOLGlobals*, int, const char*, CObject*, int, int, int)':
layer3/Executive.cpp:12888:19: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                   " Setting: %s set to %s in object \"%s\", state %d.\n",
                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                   name, value2, obj->Name, state + 1 ENDF(G);
                   ~~~~
layer3/Executive.cpp:12888:19: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 43 and 1584 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12880:19: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
                   " Setting: %s set to %s in object \"%s\".\n",
                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                   name, value2, obj->Name ENDF(G);
                   ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 34 and 1566 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12859:18: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
           PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G);
                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 21 and 1298 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'int ExecutiveUnsetSetting(PyMOLGlobals*, int, const char*, int, int, int)':
layer3/Executive.cpp:12998:23: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 215 [-Wformat-truncation=]
                       " Setting: %s unset for %d atoms in object \"%s\".\n",
                       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output 44 or more bytes (assuming 299) into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:13023:25: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=]
                         " Setting: %s unset in object \"%s\", state %d.\n",
                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:13023:25: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output 41 or more bytes (assuming 305) into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:13017:25: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=]
                         " Setting: %s unset in object \"%s\".\n",
                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output 32 or more bytes (assuming 287) into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectSlice.cpp: In function 'void ObjectSliceUpdate(ObjectSlice*)':
layer2/ObjectSlice.cpp:686:11: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 225 [-Wformat-truncation=]
           "ObjectSliceUpdate-Error: map '%s' has been deleted.\n", oss->MapName
           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectSlice.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 51 and 306 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectSlice.cpp:697:13: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 231 [-Wformat-truncation=]
             " ObjectSlice: updating \"%s\".\n", I->Obj.Name ENDFB(I->Obj.G);
             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectSlice.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 28 and 283 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c ov/src/OVRandom.cpp -o build/temp.linux-armhf-2.7/ov/src/OVRandom.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c ov/src/ov_utility.cpp -o build/temp.linux-armhf-2.7/ov/src/ov_utility.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer3/Executive.cpp: In function 'int ExecutiveDrag(Block*, int, int, int)':
layer3/Executive.cpp:16050:42: warning: '%s' directive writing up to 1023 bytes into a region of size 1013 [-Wformat-overflow=]
                   sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n",
                                          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                           order_input, (location == -2) ? "upper" : "current");
                           ~~~~~~~~~~~     
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 32 and 1057 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectSurface.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectSurface.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer4/Cmd.cpp: In function 'PyObject* CmdLoadTraj(PyObject*, PyObject*)':
layer4/Cmd.cpp:7297:9: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 255 [-Wformat-truncation=]
         "%s", buf ENDFB(G);
         ^~~~  ~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer4/Cmd.cpp:45:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin_snprintf' output between 1 and 1024 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer4/Cmd.cpp: In function 'PyObject* CmdLoadObject(PyObject*, PyObject*)':
layer4/Cmd.cpp:7060:9: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 255 [-Wformat-truncation=]
         "%s", buf ENDFB(G);
         ^~~~  ~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer4/Cmd.cpp:45:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin_snprintf' output between 1 and 1024 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'void ExecutiveManageObject(PyMOLGlobals*, CObject*, int, int)':
layer3/Executive.cpp:15045:13: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=]
             " Executive: object \"%s\" created.\n", obj->Name ENDFB(G);
             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 32 and 287 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:15053:9: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=]
         " Executive: object name \"%s\" is illegal -- renamed to 'all_'.\n", obj->Name
         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 61 and 316 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:15059:9: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=]
         " Executive-Warning: name \"%s\" collides with a selection language keyword.\n",
         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 73 and 328 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'int ExecutiveGroup(PyMOLGlobals*, const char*, const char*, int, int)':
layer3/Executive.cpp:2302:19: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=]
                   " Executive: adding '%s' to group '%s'.\n", rec->name, rec->group_name
                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 36 and 546 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'int ExecutiveSetName(PyMOLGlobals*, const char*, const char*)':
layer3/Executive.cpp:3561:7: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 234 [-Wformat-truncation=]
       "SetName-Error: name '%s' is a selection keyword.\n", name ENDFB(G);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 48 and 303 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)':
layer3/Executive.cpp:5217:13: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 213 [-Wformat-truncation=]
             " Executive: skipping unrecognized object \"%s\" of type %d.\n",
             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 56 and 321 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:5242:11: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 210 [-Wformat-truncation=]
           "ExectiveSetNamedEntries-Error: after object \"%s\".\n", rec->name ENDFB(G);
           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 49 and 304 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'void ExecutiveSelectRect(PyMOLGlobals*, BlockRect*, int)':
layer3/Executive.cpp:7616:27: warning: '%s' directive writing up to 1023 bytes into a region of size between 751 and 1008 [-Wformat-overflow=]
             sprintf(buf2, "%scmd.select(\"%s\",\"(%s)\",enable=1)\n", prefix, selName,
                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                     buffer);
                     ~~~~~~ 
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 30 and 1310 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:7625:27: warning: '%s' directive writing up to 1023 bytes into a region of size between 752 and 1009 [-Wformat-overflow=]
             sprintf(buf2, "%scmd.select(\"%s\",\"%s\",enable=1)\n", prefix, selName,
                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                     buffer);
                     ~~~~~~ 
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 28 and 1308 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'void ExecutiveCopy(PyMOLGlobals*, const char*, const char*, int)':
layer3/Executive.cpp:10398:9: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 236 [-Wformat-truncation=]
         " Executive: object %s created.\n", oDst->Obj.Name ENDFB(G);
         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 30 and 285 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectSurface.cpp: In function 'void ObjectSurfaceDump(ObjectSurface*, const char*, int)':
layer2/ObjectSurface.cpp:293:7: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=]
       " ObjectSurfaceDump: %s written to %s\n", I->Obj.Name, fname ENDFB(I->Obj.G);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectSurface.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output 34 or more bytes (assuming 289) into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectSurface.cpp: In function 'void ObjectSurfaceUpdate(ObjectSurface*)':
layer2/ObjectSurface.cpp:528:15: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=]
               " ObjectSurface: updating \"%s\".\n", I->Obj.Name ENDFB(I->Obj.G);
               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectSurface.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 30 and 285 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectSurface.cpp:497:11: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 223 [-Wformat-truncation=]
           "ObjectSurfaceUpdate-Error: map '%s' has been deleted.\n", ms->MapName
           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectSurface.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 53 and 308 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/ObjectVolume.cpp -o build/temp.linux-armhf-2.7/layer2/ObjectVolume.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer3/Executive.cpp: In function 'void ExecutiveSymExp(PyMOLGlobals*, const char*, const char*, const char*, float, int, int)':
layer3/Executive.cpp:14715:21: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 238 [-Wformat-truncation=]
                     "new_name before: %s\n", new_name ENDFB(G);
                     ^~~~~~~~~~~~~~~~~~~~~~~  ~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 19 and 1042 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:14718:21: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 236 [-Wformat-truncation=]
                     "Making new object: %s from name=%s, a=%d, x=%d, y=%d, z=%d\n",
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                     new_name, name, (int)a, x, y, z ENDFB(G);
                     ~~~~~~~~
layer3/Executive.cpp:14718:21: note: directive argument in the range [-1, 2]
layer3/Executive.cpp:14718:21: note: directive argument in the range [-1, 2]
layer3/Executive.cpp:14718:21: note: directive argument in the range [-1, 2]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output 52 or more bytes (assuming 1078) into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'int ExecutiveProcessPDBFile(PyMOLGlobals*, CObject*, const char*, const char*, const char*, int, int, int, char*, int, int, int, int)':
layer3/Executive.cpp:4238:35: warning: '%04d' directive writing between 4 and 10 bytes into a region of size between 0 and 255 [-Wformat-overflow=]
                 sprintf(pdb_name, "%s_%04d", cur_name, n_processed + 1);
                                   ^~~~~~~~~
layer3/Executive.cpp:4238:35: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 6 and 267 bytes into a destination of size 256
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:4236:35: warning: '%04d' directive writing between 4 and 10 bytes into a region of size between 0 and 255 [-Wformat-overflow=]
                 sprintf(pdb_name, "%s_%04d", cur_name, model_number);
                                   ^~~~~~~~~
layer3/Executive.cpp:4236:35: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 6 and 267 bytes into a destination of size 256
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:4225:35: warning: '%04d' directive writing between 4 and 10 bytes into a region of size between 0 and 255 [-Wformat-overflow=]
                 sprintf(pdb_name, "%s_%04d", cur_name, n_processed + 1);
                                   ^~~~~~~~~
layer3/Executive.cpp:4225:35: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 6 and 267 bytes into a destination of size 256
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:4216:33: warning: '%04d' directive writing between 4 and 10 bytes into a region of size between 0 and 255 [-Wformat-overflow=]
               sprintf(pdb_name, "%s_%04d", cur_name, n_processed + 1);
                                 ^~~~~~~~~
layer3/Executive.cpp:4216:33: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 6 and 267 bytes into a destination of size 256
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:4214:33: warning: '%04d' directive writing between 4 and 10 bytes into a region of size between 0 and 255 [-Wformat-overflow=]
               sprintf(pdb_name, "%s_%04d", cur_name, model_number);
                                 ^~~~~~~~~
layer3/Executive.cpp:4214:33: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 6 and 267 bytes into a destination of size 256
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:4203:33: warning: '%04d' directive writing between 4 and 10 bytes into a region of size between 0 and 255 [-Wformat-overflow=]
               sprintf(pdb_name, "%s_%04d", cur_name, n_processed + 1);
                                 ^~~~~~~~~
layer3/Executive.cpp:4203:33: note: directive argument in the range [1, 2147483647]
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 6 and 267 bytes into a destination of size 256
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:4401:39: warning: '%s' directive writing up to 255 bytes into a region of size between 0 and 255 [-Wformat-overflow=]
                   sprintf(align_name, "%s_%s_alignment",
                                       ^~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 12 and 522 bytes into a destination of size 256
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function 'int ExecutiveLoad(PyMOLGlobals*, const char*, int, int, const char*, int, int, int, int, int, int, const char*, const char*, const char*, bool)':
layer3/Executive.cpp:3989:7: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 255 [-Wformat-truncation=]
       "%s", buf ENDFB(G);
       ^~~~  ~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Executive.cpp:16:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin_snprintf' output between 1 and 1024 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectVolume.cpp: In function 'ObjectMapState* ObjectVolumeGetMapState(ObjectVolume*)':
layer2/ObjectVolume.cpp:76:7: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=]
       "ObjectVolume-Error: map '%s' has been deleted.\n", vs->MapName
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectVolume.cpp:20:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 46 and 301 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectVolume.cpp: In function 'CField* ObjectVolumeGetField(ObjectVolume*)':
layer2/ObjectVolume.cpp:76:7: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=]
       "ObjectVolume-Error: map '%s' has been deleted.\n", vs->MapName
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectVolume.cpp:20:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 46 and 301 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectVolume.cpp: In function 'void ObjectVolumeUpdate(ObjectVolume*)':
layer2/ObjectVolume.cpp:76:7: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=]
       "ObjectVolume-Error: map '%s' has been deleted.\n", vs->MapName
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectVolume.cpp:20:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 46 and 301 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from layer1/Setting.h:20,
                 from layer1/PyMOLObject.h:26,
                 from layer2/ObjectMolecule.h:22,
                 from layer4/Cmd.cpp:58:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double, std::allocator<double> >::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'PyObject* CmdCifGetArray(PyObject*, PyObject*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
layer2/ObjectVolume.cpp: In function 'void ObjectVolumeRender(ObjectVolume*, RenderInfo*)':
layer2/ObjectVolume.cpp:76:7: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=]
       "ObjectVolume-Error: map '%s' has been deleted.\n", vs->MapName
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer2/ObjectVolume.cpp:20:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 46 and 301 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer3/MaeExportHelpers.cpp -o build/temp.linux-armhf-2.7/layer3/MaeExportHelpers.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepAngle.cpp -o build/temp.linux-armhf-2.7/layer2/RepAngle.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer4/Export.cpp -o build/temp.linux-armhf-2.7/layer4/Export.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer3/MoleculeExporter.cpp -o build/temp.linux-armhf-2.7/layer3/MoleculeExporter.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepCartoon.cpp -o build/temp.linux-armhf-2.7/layer2/RepCartoon.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer4/Menu.cpp -o build/temp.linux-armhf-2.7/layer4/Menu.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer4/PopUp.cpp -o build/temp.linux-armhf-2.7/layer4/PopUp.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer5/PyMOL.cpp -o build/temp.linux-armhf-2.7/layer5/PyMOL.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer3/MovieScene.cpp -o build/temp.linux-armhf-2.7/layer3/MovieScene.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer5/PyMOL.cpp: In function 'char* PyMOL_GetClickString(CPyMOL*, int)':
layer5/PyMOL.cpp:2846:19: warning: '%s' directive writing up to 255 bytes into a region of size between 147 and 914 [-Wformat-overflow=]
                   "type=object:molecule\nobject=%s\nindex=%d\nrank=%d\nid=%d\nsegi=%s\nchain=%s\nresn=%s\nresi=%d%s\nname=%s\nalt=%s\nclick=%s\nmod_keys=%s\nx=%d\ny=%d\n%s",
                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer5/PyMOL.cpp:2856:70:
                   ai->alt, butstr, modstr, I->ClickedX, I->ClickedY, posstr);
                                                                      ~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer5/PyMOL.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output 112 or more bytes (assuming 1134) into a destination of size 1025
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepCylBond.cpp -o build/temp.linux-armhf-2.7/layer2/RepCylBond.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer5/TestPyMOL.cpp -o build/temp.linux-armhf-2.7/layer5/TestPyMOL.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer5/main.cpp -o build/temp.linux-armhf-2.7/layer5/main.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer2/RepDihedral.cpp -o build/temp.linux-armhf-2.7/layer2/RepDihedral.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer5/main.cpp: In function 'void launch(CPyMOLOptions*, int)':
layer5/main.cpp:1480:31: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
     char *myArgv[8] = {"pymol"};
                               ^
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer3/PlugIOManager.cpp -o build/temp.linux-armhf-2.7/layer3/PlugIOManager.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c modules/cealign/src/ccealignmodule.cpp -o build/temp.linux-armhf-2.7/modules/cealign/src/ccealignmodule.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer3/PlugIOManager.cpp: In function 'CObject* PlugIOManagerLoad(PyMOLGlobals*, CObject**, const char*, int, int, const char*)':
layer3/PlugIOManager.cpp:859:9: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 200 [-Wformat-truncation=]
         " PlugIOManagerLoad: can't load trajectory into object '%s'\n", obj->Name ENDFB(G);
         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/PlugIOManager.cpp:17:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 58 and 313 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer3/Seeker.cpp -o build/temp.linux-armhf-2.7/layer3/Seeker.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer3/Seeker.cpp: In function 'void SeekerSelectionToggleRange(PyMOLGlobals*, CSeqRow*, int, int, int, int, int)':
layer3/Seeker.cpp:148:27: warning: '%s' directive writing up to 1023 bytes into a region of size between 752 and 1009 [-Wformat-overflow=]
             sprintf(buf2, "%scmd.select(\"%s\",\"%s\",enable=1)\n", prefix, selName,
                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                     buf1);
                     ~~~~   
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Seeker.cpp:20:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 28 and 1308 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Seeker.cpp: In function 'void SeekerSelectionToggle(PyMOLGlobals*, CSeqRow*, int, int, int, int)':
layer3/Seeker.cpp:232:27: warning: '%s' directive writing up to 1023 bytes into a region of size between 752 and 1009 [-Wformat-overflow=]
             sprintf(buf2, "%scmd.select(\"%s\",\"%s\",enable=1)\n", prefix, selName,
                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                     buf1);
                     ~~~~   
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Seeker.cpp:20:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 28 and 1308 bytes into a destination of size 1024
   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
       __bos (__s), __fmt, __va_arg_pack ());
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c ov/src/OVContext.cpp -o build/temp.linux-armhf-2.7/ov/src/OVContext.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c ov/src/OVHeap.cpp -o build/temp.linux-armhf-2.7/ov/src/OVHeap.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c ov/src/OVHeapArray.cpp -o build/temp.linux-armhf-2.7/ov/src/OVHeapArray.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c ov/src/OVLexicon.cpp -o build/temp.linux-armhf-2.7/ov/src/OVLexicon.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c ov/src/OVOneToAny.cpp -o build/temp.linux-armhf-2.7/ov/src/OVOneToAny.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c ov/src/OVOneToOne.cpp -o build/temp.linux-armhf-2.7/ov/src/OVOneToOne.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_FREETYPE -DNO_MMLIBS -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python2.7 -c layer3/Selector.cpp -o build/temp.linux-armhf-2.7/layer3/Selector.o -Wno-narrowing -Wno-unused-function -Wno-char-subscripts -ffast-math -funroll-loops -O3 -fcommon
layer3/Selector.cpp: In function 'int SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)':
layer3/Selector.cpp:2036:21: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 207 [-Wformat-truncation=]
                     " AssignSS-Warning: Ignoring incomplete residue /%s/%s/%s/%d%c ...\n",
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Selector.cpp:19:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output 59 or more bytes (assuming 314) into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function 'int* SelectorEvaluate(PyMOLGlobals*, char (*)[1024], int, int)':
layer3/Selector.cpp:9195:13: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 223 [-Wformat-truncation=]
             " Selector-Error: invalid model \"%s\".\n", base[1].text ENDFB(G);
             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Selector.cpp:19:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 36 and 1059 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Selector.cpp:10828:6: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 255 [-Wformat-truncation=]
      "%s", line ENDFB(G);
      ^~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Selector.cpp:19:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin_snprintf' output between 1 and 1024 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Selector.cpp:10833:4: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 255 [-Wformat-truncation=]
    "%s\n", line ENDFB(G);
    ^~~~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Selector.cpp:19:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 2 and 1025 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function 'int _SelectorCreate(PyMOLGlobals*, const char*, const char*, ObjectMolecule**, int, Multipick*, CSeqRow*, int, int**, int*, int, OVOneToAny*, int, int, int)':
layer3/Selector.cpp:7465:11: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 233 [-Wformat-truncation=]
           " Selector: selection \"%s\" defined with %d atoms.\n", name, c ENDFB(G);
           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Selector.cpp:19:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 47 and 1080 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function 'int _SelectorCreate(PyMOLGlobals*, const char*, const char*, ObjectMolecule**, int, Multipick*, CSeqRow*, int, int**, int*, int, OVOneToAny*, int, int, int)':
layer3/Selector.cpp:7465:11: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 233 [-Wformat-truncation=]
           " Selector: selection \"%s\" defined with %d atoms.\n", name, c ENDFB(G);
           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~
In file included from /usr/include/stdio.h:862,
                 from /usr/include/python2.7/Python.h:33,
                 from layer0/os_python.h:34,
                 from layer3/Selector.cpp:19:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 47 and 1080 bytes into a destination of size 255
   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        __bos (__s), __fmt, __va_arg_pack ());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-7yWIbs/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/build/generated/ShaderText.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/carplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/corplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/hash.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/inthash.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/offplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.o build/temp.linux-armhf-2.7/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.o build/temp.linux-armhf-2.7/layer0/Block.o build/temp.linux-armhf-2.7/layer0/Crystal.o build/temp.linux-armhf-2.7/layer0/Debug.o build/temp.linux-armhf-2.7/layer0/Deferred.o build/temp.linux-armhf-2.7/layer0/Err.o build/temp.linux-armhf-2.7/layer0/Feedback.o build/temp.linux-armhf-2.7/layer0/Field.o build/temp.linux-armhf-2.7/layer0/File.o build/temp.linux-armhf-2.7/layer0/GenericBuffer.o build/temp.linux-armhf-2.7/layer0/GraphicsUtil.o build/temp.linux-armhf-2.7/layer0/Isosurf.o build/temp.linux-armhf-2.7/layer0/Map.o build/temp.linux-armhf-2.7/layer0/Match.o build/temp.linux-armhf-2.7/layer0/Matrix.o build/temp.linux-armhf-2.7/layer0/MemoryCache.o build/temp.linux-armhf-2.7/layer0/MemoryDebug.o build/temp.linux-armhf-2.7/layer0/MyPNG.o build/temp.linux-armhf-2.7/layer0/Parse.o build/temp.linux-armhf-2.7/layer0/Pixmap.o build/temp.linux-armhf-2.7/layer0/Queue.o build/temp.linux-armhf-2.7/layer0/ShaderMgr.o build/temp.linux-armhf-2.7/layer0/ShaderPrg.o build/temp.linux-armhf-2.7/layer0/Sphere.o build/temp.linux-armhf-2.7/layer0/Tetsurf.o build/temp.linux-armhf-2.7/layer0/Texture.o build/temp.linux-armhf-2.7/layer0/Tracker.o build/temp.linux-armhf-2.7/layer0/Triangle.o build/temp.linux-armhf-2.7/layer0/Util.o build/temp.linux-armhf-2.7/layer0/Util2.o build/temp.linux-armhf-2.7/layer0/Vector.o build/temp.linux-armhf-2.7/layer0/Word.o build/temp.linux-armhf-2.7/layer0/os_gl.o build/temp.linux-armhf-2.7/layer1/Basis.o build/temp.linux-armhf-2.7/layer1/ButMode.o build/temp.linux-armhf-2.7/layer1/CGO.o build/temp.linux-armhf-2.7/layer1/COLLADA.o build/temp.linux-armhf-2.7/layer1/Character.o build/temp.linux-armhf-2.7/layer1/Color.o build/temp.linux-armhf-2.7/layer1/Control.o build/temp.linux-armhf-2.7/layer1/Extrude.o build/temp.linux-armhf-2.7/layer1/Font.o build/temp.linux-armhf-2.7/layer1/FontGLUT.o build/temp.linux-armhf-2.7/layer1/FontGLUT8x13.o build/temp.linux-armhf-2.7/layer1/FontGLUT9x15.o build/temp.linux-armhf-2.7/layer1/FontGLUTHel10.o build/temp.linux-armhf-2.7/layer1/FontGLUTHel12.o build/temp.linux-armhf-2.7/layer1/FontGLUTHel18.o build/temp.linux-armhf-2.7/layer1/FontType.o build/temp.linux-armhf-2.7/layer1/Movie.o build/temp.linux-armhf-2.7/layer1/Ortho.o build/temp.linux-armhf-2.7/layer1/P.o build/temp.linux-armhf-2.7/layer1/PConv.o build/temp.linux-armhf-2.7/layer1/Pop.o build/temp.linux-armhf-2.7/layer1/PyMOLObject.o build/temp.linux-armhf-2.7/layer1/Ray.o build/temp.linux-armhf-2.7/layer1/Rep.o build/temp.linux-armhf-2.7/layer1/Scene.o build/temp.linux-armhf-2.7/layer1/ScenePicking.o build/temp.linux-armhf-2.7/layer1/SceneRay.o build/temp.linux-armhf-2.7/layer1/SceneRender.o build/temp.linux-armhf-2.7/layer1/ScrollBar.o build/temp.linux-armhf-2.7/layer1/Seq.o build/temp.linux-armhf-2.7/layer1/Setting.o build/temp.linux-armhf-2.7/layer1/Shaker.o build/temp.linux-armhf-2.7/layer1/Symmetry.o build/temp.linux-armhf-2.7/layer1/Text.o build/temp.linux-armhf-2.7/layer1/TypeFace.o build/temp.linux-armhf-2.7/layer1/View.o build/temp.linux-armhf-2.7/layer1/Wizard.o build/temp.linux-armhf-2.7/layer2/AssemblyHelpers.o build/temp.linux-armhf-2.7/layer2/AtomInfo.o build/temp.linux-armhf-2.7/layer2/AtomInfoHistory.o build/temp.linux-armhf-2.7/layer2/BondTypeHistory.o build/temp.linux-armhf-2.7/layer2/CifFile.o build/temp.linux-armhf-2.7/layer2/CifMoleculeReader.o build/temp.linux-armhf-2.7/layer2/CoordSet.o build/temp.linux-armhf-2.7/layer2/DistSet.o build/temp.linux-armhf-2.7/layer2/GadgetSet.o build/temp.linux-armhf-2.7/layer2/HydrogenAdder.o build/temp.linux-armhf-2.7/layer2/MmodTyping.o build/temp.linux-armhf-2.7/layer2/MmtfMoleculeReader.o build/temp.linux-armhf-2.7/layer2/Mol2Typing.o build/temp.linux-armhf-2.7/layer2/MolV3000.o build/temp.linux-armhf-2.7/layer2/ObjectAlignment.o build/temp.linux-armhf-2.7/layer2/ObjectCGO.o build/temp.linux-armhf-2.7/layer2/ObjectCallback.o build/temp.linux-armhf-2.7/layer2/ObjectDist.o build/temp.linux-armhf-2.7/layer2/ObjectGadget.o build/temp.linux-armhf-2.7/layer2/ObjectGadgetRamp.o build/temp.linux-armhf-2.7/layer2/ObjectGroup.o build/temp.linux-armhf-2.7/layer2/ObjectMap.o build/temp.linux-armhf-2.7/layer2/ObjectMesh.o build/temp.linux-armhf-2.7/layer2/ObjectMolecule.o build/temp.linux-armhf-2.7/layer2/ObjectMolecule2.o build/temp.linux-armhf-2.7/layer2/ObjectSlice.o build/temp.linux-armhf-2.7/layer2/ObjectSurface.o build/temp.linux-armhf-2.7/layer2/ObjectVolume.o build/temp.linux-armhf-2.7/layer2/RepAngle.o build/temp.linux-armhf-2.7/layer2/RepCartoon.o build/temp.linux-armhf-2.7/layer2/RepCylBond.o build/temp.linux-armhf-2.7/layer2/RepDihedral.o build/temp.linux-armhf-2.7/layer2/RepDistDash.o build/temp.linux-armhf-2.7/layer2/RepDistLabel.o build/temp.linux-armhf-2.7/layer2/RepDot.o build/temp.linux-armhf-2.7/layer2/RepEllipsoid.o build/temp.linux-armhf-2.7/layer2/RepLabel.o build/temp.linux-armhf-2.7/layer2/RepMesh.o build/temp.linux-armhf-2.7/layer2/RepNonbonded.o build/temp.linux-armhf-2.7/layer2/RepNonbondedSphere.o build/temp.linux-armhf-2.7/layer2/RepRibbon.o build/temp.linux-armhf-2.7/layer2/RepSphere.o build/temp.linux-armhf-2.7/layer2/RepSphereGenerate.o build/temp.linux-armhf-2.7/layer2/RepSphereImmediate.o build/temp.linux-armhf-2.7/layer2/RepSurface.o build/temp.linux-armhf-2.7/layer2/RepWireBond.o build/temp.linux-armhf-2.7/layer2/Sculpt.o build/temp.linux-armhf-2.7/layer2/SculptCache.o build/temp.linux-armhf-2.7/layer2/SideChainHelper.o build/temp.linux-armhf-2.7/layer2/VFont.o build/temp.linux-armhf-2.7/layer3/AtomIterators.o build/temp.linux-armhf-2.7/layer3/CifDataValueFormatter.o build/temp.linux-armhf-2.7/layer3/Editor.o build/temp.linux-armhf-2.7/layer3/Executive.o build/temp.linux-armhf-2.7/layer3/MaeExportHelpers.o build/temp.linux-armhf-2.7/layer3/MoleculeExporter.o build/temp.linux-armhf-2.7/layer3/MovieScene.o build/temp.linux-armhf-2.7/layer3/PlugIOManager.o build/temp.linux-armhf-2.7/layer3/Seeker.o build/temp.linux-armhf-2.7/layer3/Selector.o build/temp.linux-armhf-2.7/layer4/Cmd.o build/temp.linux-armhf-2.7/layer4/Export.o build/temp.linux-armhf-2.7/layer4/Menu.o build/temp.linux-armhf-2.7/layer4/PopUp.o build/temp.linux-armhf-2.7/layer5/PyMOL.o build/temp.linux-armhf-2.7/layer5/TestPyMOL.o build/temp.linux-armhf-2.7/layer5/main.o build/temp.linux-armhf-2.7/modules/cealign/src/ccealignmodule.o build/temp.linux-armhf-2.7/ov/src/OVContext.o build/temp.linux-armhf-2.7/ov/src/OVHeap.o build/temp.linux-armhf-2.7/ov/src/OVHeapArray.o build/temp.linux-armhf-2.7/ov/src/OVLexicon.o build/temp.linux-armhf-2.7/ov/src/OVOneToAny.o build/temp.linux-armhf-2.7/ov/src/OVOneToOne.o build/temp.linux-armhf-2.7/ov/src/OVRandom.o build/temp.linux-armhf-2.7/ov/src/ov_utility.o -lxml2 -lpng -lfreetype -lGLEW -lGL -lglut -o /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/_cmd.so
building 'chempy.champ._champ' extension
creating build/temp.linux-armhf-2.7/contrib/champ
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icontrib/champ -I/usr/include/python2.7 -c contrib/champ/champ_module.c -o build/temp.linux-armhf-2.7/contrib/champ/champ_module.o
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icontrib/champ -I/usr/include/python2.7 -c contrib/champ/champ.c -o build/temp.linux-armhf-2.7/contrib/champ/champ.o
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icontrib/champ -I/usr/include/python2.7 -c contrib/champ/err2.c -o build/temp.linux-armhf-2.7/contrib/champ/err2.o
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icontrib/champ -I/usr/include/python2.7 -c contrib/champ/chiral.c -o build/temp.linux-armhf-2.7/contrib/champ/chiral.o
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icontrib/champ -I/usr/include/python2.7 -c contrib/champ/feedback2.c -o build/temp.linux-armhf-2.7/contrib/champ/feedback2.o
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icontrib/champ -I/usr/include/python2.7 -c contrib/champ/list.c -o build/temp.linux-armhf-2.7/contrib/champ/list.o
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icontrib/champ -I/usr/include/python2.7 -c contrib/champ/os_memory.c -o build/temp.linux-armhf-2.7/contrib/champ/os_memory.o
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icontrib/champ -I/usr/include/python2.7 -c contrib/champ/sort.c -o build/temp.linux-armhf-2.7/contrib/champ/sort.o
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icontrib/champ -I/usr/include/python2.7 -c contrib/champ/strblock.c -o build/temp.linux-armhf-2.7/contrib/champ/strblock.o
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icontrib/champ -I/usr/include/python2.7 -c contrib/champ/vla.c -o build/temp.linux-armhf-2.7/contrib/champ/vla.o
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-7yWIbs/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pymol-2.2.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/contrib/champ/champ.o build/temp.linux-armhf-2.7/contrib/champ/champ_module.o build/temp.linux-armhf-2.7/contrib/champ/chiral.o build/temp.linux-armhf-2.7/contrib/champ/err2.o build/temp.linux-armhf-2.7/contrib/champ/feedback2.o build/temp.linux-armhf-2.7/contrib/champ/list.o build/temp.linux-armhf-2.7/contrib/champ/os_memory.o build/temp.linux-armhf-2.7/contrib/champ/sort.o build/temp.linux-armhf-2.7/contrib/champ/strblock.o build/temp.linux-armhf-2.7/contrib/champ/vla.o -o /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/champ/_champ.so
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<BUILDDIR>>/pymol-2.2.0+dfsg'
chmod +x test/pymol-test
(cd test && python run)
 run_tests: C0001quit...
 run_tests: C0001quit.log DIFFERS over about 1 lines.
 run_tests: C0010hello...
 run_tests: C0010hello.log DIFFERS over about 1 lines.
 run_tests: C0020pdb...
 run_tests: C0020pdb.log DIFFERS over about 4 lines.
 run_tests: C0020pdb.pdb is missing.
 run_tests: C0021pdbstr...
 run_tests: C0021pdbstr.log DIFFERS over about 3 lines.
 run_tests: C0025mol...
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make[1]: Leaving directory '/<<BUILDDIR>>/pymol-2.2.0+dfsg'
   create-stamp debian/debhelper-build-stamp
 fakeroot debian/rules binary-arch
dh binary-arch --with python2 --buildsystem pybuild
   dh_testroot -a -O--buildsystem=pybuild
   dh_prep -a -O--buildsystem=pybuild
   dh_installdirs -a -O--buildsystem=pybuild
   dh_auto_install -a -O--buildsystem=pybuild
I: pybuild base:217: /usr/bin/python setup.py install --root /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol 
running install
running build
running build_py
running build_ext
running install_lib
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/mmtf
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/mmtf/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/mmtf
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/mmtf/io.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/mmtf
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/tinker
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/tinker/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/tinker
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/tinker/amber.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/tinker
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/tinker/keyword.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/tinker
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/tinker/realtime.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/tinker
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/tinker/state.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/tinker
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/fast
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/fast/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/fast
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/fragments
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/fragments/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/fragments
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/champ
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/champ/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/champ
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/champ/amber99.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/champ
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/champ/assign.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/champ
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/champ/formal_charges.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/champ
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/champ/_champ.so -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/champ
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bmin
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bmin/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bmin
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bmin/commands.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bmin
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bmin/realtime.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bmin
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bmin/state.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bmin
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bmin/util.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bmin
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/arc.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bond_amber.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bond_mmff.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/bonds.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/brick.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/cc1.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/cex.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/charge.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/cif.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/cpv.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/dictdb.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/gamess1.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/gms.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/hetatm.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/io.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/lst.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/mae.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/map.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/mass.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/mmd.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/models.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/mol.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/mol2.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/neighbor.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/pdb.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/pkl.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/place.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/protein.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/protein_amber.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/protein_amber99.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/protein_mmff.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/protein_residues.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/sdf.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/solvate.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/water_amber.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/water_residues.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/chempy/xyz.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/TextEditor.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/advanced_settings_gui.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/builder.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/file_dialogs.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/keymapping.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/mimic_pmg_tk.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/mimic_tk.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/properties_dialog.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/pymol_gl_widget.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/pymol_qt_gui.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/volume.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/syntax
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/syntax/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/syntax
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/syntax/pml.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/syntax
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/syntax/pmlparser.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/syntax
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/syntax/python.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/syntax
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/askpartial.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/colors.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/fetch.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/load_mae.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/load_map.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/load_mtz.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/load_traj.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/movieexport.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/pluginitem.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/pluginmanager.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/png.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/props.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/render.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/save_molecule.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_qt/forms/save_object.ui -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/startup
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/startup/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/startup
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/startup/apbs_tools.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/startup
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/startup/remote_pdb_load.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/startup
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/skins
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/skins/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/skins
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/skins/demo
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/skins/demo/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/skins/demo
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/skins/normal
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/skins/normal/ModalWindow.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/skins/normal
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/skins/normal/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/skins/normal
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/skins/normal/builder.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/skins/normal
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/ColorEditor.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/Demo.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/PMGApp.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/PyMOLMapLoad.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/SetEditor.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/Setting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/TextEditor.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pmg_tk/volume.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/opengl
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/opengl/glu
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/opengl/glu/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/opengl/glu
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/opengl/glut
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/opengl/glut/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/opengl/glut
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/opengl/gl
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/opengl/gl/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/opengl/gl
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/opengl/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/opengl
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/embed
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/embed/epymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/embed/epymol/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/embed/epymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/embed/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/embed
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/embed/wxpymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/embed/wxpymol/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/embed/wxpymol
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/contrib
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/contrib/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/contrib
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/Qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/Qt/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/Qt
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/Qt/utils.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/Qt
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/stereochemistry
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/stereochemistry/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/stereochemistry
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/annotation.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/appearance.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/benchmark.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/box.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/charge.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/cleanup.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/command.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/demo.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/density.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/distance.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/dragging.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/fedora.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/filter.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/label.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/measurement.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/message.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/mutagenesis.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/nucmutagenesis.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/pair_fit.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/pseudoatom.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/renaming.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/sculpting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/security.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/stereodemo.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizard/toggle.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/__main__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/_gui.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/api.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/callback.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/cgo.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/checking.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/cmd.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/colorprinting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/colorramping.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/commanding.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/completing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/computing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/constants.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/constants_palette.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/controlling.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/creating.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/diagnosing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/editing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/editor.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/experimenting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/exporting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/externing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/feedingback.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/fitting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/gui.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/headering.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/helping.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/importing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/internal.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/invocation.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/keyboard.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/keywords.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/lazyio.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/locking.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/m4x.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/menu.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/monitoring.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/morphing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/movie.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/moving.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/parser.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/parsing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/preset.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/pymolhttpd.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/querying.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/rpc.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/selecting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/selector.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/setting.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/shortcut.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/util.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/vfont.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/viewing.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/wizarding.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/xray.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/xwin.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/povray.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/plugins
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/plugins/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/plugins
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/plugins/installation.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/plugins
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/plugins/legacysupport.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/plugins
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/plugins/managergui.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/plugins
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/plugins/managergui_qt.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/plugins
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/plugins/repository.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/plugins
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol/_cmd.so -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol
creating /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol2
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol2/__init__.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol2
copying /<<BUILDDIR>>/pymol-2.2.0+dfsg/.pybuild/cpython2_2.7_pymol/build/pymol2/cmd2.py -> /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol2
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/mmtf/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/mmtf/io.py to io.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/tinker/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/tinker/amber.py to amber.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/tinker/keyword.py to keyword.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/tinker/realtime.py to realtime.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/tinker/state.py to state.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/fast/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/fragments/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/champ/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/champ/amber99.py to amber99.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/champ/assign.py to assign.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/champ/formal_charges.py to formal_charges.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bmin/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bmin/commands.py to commands.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bmin/realtime.py to realtime.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bmin/state.py to state.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bmin/util.py to util.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/arc.py to arc.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bond_amber.py to bond_amber.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bond_mmff.py to bond_mmff.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/bonds.py to bonds.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/brick.py to brick.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/cc1.py to cc1.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/cex.py to cex.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/charge.py to charge.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/cif.py to cif.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/cpv.py to cpv.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/dictdb.py to dictdb.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/gamess1.py to gamess1.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/gms.py to gms.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/hetatm.py to hetatm.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/io.py to io.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/lst.py to lst.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/mae.py to mae.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/map.py to map.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/mass.py to mass.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/mmd.py to mmd.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/models.py to models.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/mol.py to mol.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/mol2.py to mol2.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/neighbor.py to neighbor.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/pdb.py to pdb.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/pkl.py to pkl.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/place.py to place.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/protein.py to protein.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/protein_amber.py to protein_amber.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/protein_amber99.py to protein_amber99.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/protein_mmff.py to protein_mmff.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/protein_residues.py to protein_residues.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/sdf.py to sdf.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/solvate.py to solvate.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/water_amber.py to water_amber.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/water_residues.py to water_residues.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/chempy/xyz.py to xyz.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/TextEditor.py to TextEditor.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/advanced_settings_gui.py to advanced_settings_gui.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/builder.py to builder.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/file_dialogs.py to file_dialogs.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/keymapping.py to keymapping.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/mimic_pmg_tk.py to mimic_pmg_tk.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/mimic_tk.py to mimic_tk.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/properties_dialog.py to properties_dialog.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/pymol_gl_widget.py to pymol_gl_widget.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/pymol_qt_gui.py to pymol_qt_gui.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/volume.py to volume.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/syntax/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/syntax/pml.py to pml.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/syntax/pmlparser.py to pmlparser.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/syntax/python.py to python.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_qt/forms/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/startup/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/startup/apbs_tools.py to apbs_tools.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/startup/remote_pdb_load.py to remote_pdb_load.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/skins/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/skins/demo/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/skins/normal/ModalWindow.py to ModalWindow.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/skins/normal/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/skins/normal/builder.py to builder.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/ColorEditor.py to ColorEditor.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/Demo.py to Demo.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/PMGApp.py to PMGApp.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/PyMOLMapLoad.py to PyMOLMapLoad.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/SetEditor.py to SetEditor.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/Setting.py to Setting.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/TextEditor.py to TextEditor.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pmg_tk/volume.py to volume.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/opengl/glu/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/opengl/glut/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/opengl/gl/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/opengl/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/embed/epymol/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/embed/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/embed/wxpymol/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/contrib/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/Qt/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/Qt/utils.py to utils.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/stereochemistry/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/annotation.py to annotation.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/appearance.py to appearance.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/benchmark.py to benchmark.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/box.py to box.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/charge.py to charge.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/cleanup.py to cleanup.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/command.py to command.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/demo.py to demo.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/density.py to density.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/distance.py to distance.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/dragging.py to dragging.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/fedora.py to fedora.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/filter.py to filter.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/label.py to label.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/measurement.py to measurement.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/message.py to message.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/mutagenesis.py to mutagenesis.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/nucmutagenesis.py to nucmutagenesis.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/pair_fit.py to pair_fit.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/pseudoatom.py to pseudoatom.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/renaming.py to renaming.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/sculpting.py to sculpting.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/security.py to security.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/stereodemo.py to stereodemo.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizard/toggle.py to toggle.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/__main__.py to __main__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/_gui.py to _gui.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/api.py to api.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/callback.py to callback.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/cgo.py to cgo.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/checking.py to checking.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/cmd.py to cmd.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/colorprinting.py to colorprinting.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/colorramping.py to colorramping.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/commanding.py to commanding.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/completing.py to completing.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/computing.py to computing.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/constants.py to constants.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/constants_palette.py to constants_palette.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/controlling.py to controlling.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/creating.py to creating.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/diagnosing.py to diagnosing.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/editing.py to editing.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/editor.py to editor.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/experimenting.py to experimenting.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/exporting.py to exporting.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/externing.py to externing.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/feedingback.py to feedingback.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/fitting.py to fitting.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/gui.py to gui.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/headering.py to headering.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/helping.py to helping.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/importing.py to importing.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/internal.py to internal.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/invocation.py to invocation.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/keyboard.py to keyboard.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/keywords.py to keywords.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/lazyio.py to lazyio.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/locking.py to locking.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/m4x.py to m4x.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/menu.py to menu.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/monitoring.py to monitoring.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/morphing.py to morphing.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/movie.py to movie.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/moving.py to moving.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/parser.py to parser.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/parsing.py to parsing.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/preset.py to preset.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/pymolhttpd.py to pymolhttpd.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/querying.py to querying.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/rpc.py to rpc.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/selecting.py to selecting.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/selector.py to selector.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/setting.py to setting.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/shortcut.py to shortcut.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/util.py to util.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/vfont.py to vfont.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/viewing.py to viewing.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/wizarding.py to wizarding.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/xray.py to xray.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/xwin.py to xwin.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/povray.py to povray.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/plugins/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/plugins/installation.py to installation.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/plugins/legacysupport.py to legacysupport.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/plugins/managergui.py to managergui.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/plugins/managergui_qt.py to managergui_qt.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol/plugins/repository.py to repository.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol2/__init__.py to __init__.pyc
byte-compiling /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol2/cmd2.py to cmd2.pyc
running install_egg_info
Writing /<<BUILDDIR>>/pymol-2.2.0+dfsg/debian/pymol/usr/lib/python2.7/dist-packages/pymol-2.2.0.egg-info
   debian/rules override_dh_install
make[1]: Entering directory '/<<BUILDDIR>>/pymol-2.2.0+dfsg'
pdflatex -output-directory debian -jobname pymol-ref-card debian/pymolRef.tex
This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./debian/pymolRef.tex
LaTeX2e <2018-04-01> patch level 5
(/usr/share/texlive/texmf-dist/tex/latex/base/article.cls
Document Class: article 2014/09/29 v1.4h Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo))
(/usr/share/texlive/texmf-dist/tex/latex/tools/multicol.sty)
No file pymol-ref-card.aux.

Underfull \hbox (badness 10000) in paragraph at lines 78--79

[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}]
(/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [2]
(debian/pymol-ref-card.aux) )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fo
nts/type1/public/amsfonts/cm/cmitt10.pfb></usr/share/texlive/texmf-dist/fonts/t
ype1/public/amsfonts/cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmr12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmr9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy9
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti9.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt9.pfb>
Output written on debian/pymol-ref-card.pdf (2 pages, 107913 bytes).
Transcript written on debian/pymol-ref-card.log.
sed -e s/@PYTHON_VERSION@/2.7/g < debian/pymol.launch.in > debian/pymol.launch
dh_numpy
dh_install
install -m 755 debian/pymol.launch debian/pymol/usr/bin/pymol
make[1]: Leaving directory '/<<BUILDDIR>>/pymol-2.2.0+dfsg'
   dh_installdocs -a -O--buildsystem=pybuild
   dh_installchangelogs -a -O--buildsystem=pybuild
   dh_installexamples -a -O--buildsystem=pybuild
   dh_installman -a -O--buildsystem=pybuild
   dh_installcatalogs -a -O--buildsystem=pybuild
   dh_installcron -a -O--buildsystem=pybuild
   dh_installdebconf -a -O--buildsystem=pybuild
   dh_installemacsen -a -O--buildsystem=pybuild
   dh_installifupdown -a -O--buildsystem=pybuild
   dh_installinfo -a -O--buildsystem=pybuild
   dh_python2 -a -O--buildsystem=pybuild
I: dh_python2 fs:329: renaming _champ.so to _champ.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming _cmd.so to _cmd.arm-linux-gnueabihf.so
   dh_installinit -a -O--buildsystem=pybuild
   dh_installsystemd -a -O--buildsystem=pybuild
   dh_installmenu -a -O--buildsystem=pybuild
   dh_installmime -a -O--buildsystem=pybuild
   dh_installmodules -a -O--buildsystem=pybuild
   dh_installlogcheck -a -O--buildsystem=pybuild
   dh_installlogrotate -a -O--buildsystem=pybuild
   dh_installpam -a -O--buildsystem=pybuild
   dh_installppp -a -O--buildsystem=pybuild
   dh_installudev -a -O--buildsystem=pybuild
   dh_installgsettings -a -O--buildsystem=pybuild
   dh_bugfiles -a -O--buildsystem=pybuild
   dh_ucf -a -O--buildsystem=pybuild
   dh_lintian -a -O--buildsystem=pybuild
   dh_gconf -a -O--buildsystem=pybuild
dh_gconf: Please migrate to dh_installgsettings; gconf + dh_gconf is scheduled for removal.
   dh_icons -a -O--buildsystem=pybuild
   dh_perl -a -O--buildsystem=pybuild
   dh_usrlocal -a -O--buildsystem=pybuild
   dh_link -a -O--buildsystem=pybuild
   dh_installwm -a -O--buildsystem=pybuild
   dh_installxfonts -a -O--buildsystem=pybuild
   dh_strip_nondeterminism -a -O--buildsystem=pybuild
   debian/rules override_dh_compress
make[1]: Entering directory '/<<BUILDDIR>>/pymol-2.2.0+dfsg'
dh_compress -Xpdb
make[1]: Leaving directory '/<<BUILDDIR>>/pymol-2.2.0+dfsg'
   dh_fixperms -a -O--buildsystem=pybuild
   dh_missing -a -O--buildsystem=pybuild
   dh_strip -a -O--buildsystem=pybuild
   dh_makeshlibs -a -O--buildsystem=pybuild
   dh_shlibdeps -a -O--buildsystem=pybuild
   dh_installdeb -a -O--buildsystem=pybuild
   dh_gencontrol -a -O--buildsystem=pybuild
dpkg-gencontrol: warning: package pymol: substitution variable ${python:Versions} unused, but is defined
dpkg-gencontrol: warning: package pymol: substitution variable ${python:Versions} unused, but is defined
   dh_md5sums -a -O--buildsystem=pybuild
   dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'pymol-dbgsym' in '../pymol-dbgsym_2.2.0+dfsg-1.1_armhf.deb'.
dpkg-deb: building package 'pymol' in '../pymol_2.2.0+dfsg-1.1_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../pymol_2.2.0+dfsg-1.1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-12-09T11:33:03Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


pymol_2.2.0+dfsg-1.1_armhf.changes:
-----------------------------------

Format: 1.8
Date: Fri, 07 Dec 2018 12:29:01 +0000
Source: pymol
Binary: pymol pymol-data
Architecture: armhf
Version: 2.2.0+dfsg-1.1
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Alastair McKinstry <mckinstry@debian.org>
Description:
 pymol      - Molecular Graphics System
 pymol-data - data files for PyMOL
Closes: 915112
Changes:
 pymol (2.2.0+dfsg-1.1) unstable; urgency=medium
 .
   * Team upload
   * Fix for FTBFS with glew 2.1, needed for glew/hdf5 transitions.
     Closes: #915112
Checksums-Sha1:
 38169660dbf5d1540df1374d85358fb72bd1d7d2 22816604 pymol-dbgsym_2.2.0+dfsg-1.1_armhf.deb
 43f3ee0d7c54dc6611a7b47f0943304ae93e293e 11145 pymol_2.2.0+dfsg-1.1_armhf.buildinfo
 aa1a2c8258d0041babfbe667dec5fe8eddb438f8 3574064 pymol_2.2.0+dfsg-1.1_armhf.deb
Checksums-Sha256:
 b1a251e21c28a2841545c8bfe08dea6e785e895c22da389e8912408bc1e87c2e 22816604 pymol-dbgsym_2.2.0+dfsg-1.1_armhf.deb
 cba78660327101fb5d63d1cebab3a66c7f43629dfd9baebc6dc1bf4a43d2588f 11145 pymol_2.2.0+dfsg-1.1_armhf.buildinfo
 bab77315e7c783cb59fe6a89d23d94a89294f437748ad1646cf0b448d119cefe 3574064 pymol_2.2.0+dfsg-1.1_armhf.deb
Files:
 85a3cd7b962ab6c44121d29a6e57607b 22816604 debug optional pymol-dbgsym_2.2.0+dfsg-1.1_armhf.deb
 b0fd41af3f43d08f0d809670b8ffa68d 11145 science optional pymol_2.2.0+dfsg-1.1_armhf.buildinfo
 22139548aafa0d38ca9c3f5475613b96 3574064 science optional pymol_2.2.0+dfsg-1.1_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


pymol-dbgsym_2.2.0+dfsg-1.1_armhf.deb
-------------------------------------

 new Debian package, version 2.0.
 size 22816604 bytes: control archive=596 bytes.
     401 bytes,    12 lines      control              
     212 bytes,     2 lines      md5sums              
 Package: pymol-dbgsym
 Source: pymol
 Version: 2.2.0+dfsg-1.1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 22910
 Depends: pymol (= 2.2.0+dfsg-1.1)
 Section: debug
 Priority: optional
 Description: debug symbols for pymol
 Build-Ids: 20f4f357ced0d83b0db3c75e74f96ab3c8ec12a9 97280edf0e9ade78813f6fa2bd0f8f56dc7cc858

drwxr-xr-x root/root         0 2018-12-07 12:29 ./
drwxr-xr-x root/root         0 2018-12-07 12:29 ./usr/
drwxr-xr-x root/root         0 2018-12-07 12:29 ./usr/lib/
drwxr-xr-x root/root         0 2018-12-07 12:29 ./usr/lib/debug/
drwxr-xr-x root/root         0 2018-12-07 12:29 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2018-12-07 12:29 ./usr/lib/debug/.build-id/20/
-rw-r--r-- root/root    106296 2018-12-07 12:29 ./usr/lib/debug/.build-id/20/f4f357ced0d83b0db3c75e74f96ab3c8ec12a9.debug
drwxr-xr-x root/root         0 2018-12-07 12:29 ./usr/lib/debug/.build-id/97/
-rw-r--r-- root/root  23341756 2018-12-07 12:29 ./usr/lib/debug/.build-id/97/280edf0e9ade78813f6fa2bd0f8f56dc7cc858.debug
drwxr-xr-x root/root         0 2018-12-07 12:29 ./usr/share/
drwxr-xr-x root/root         0 2018-12-07 12:29 ./usr/share/doc/
lrwxrwxrwx root/root         0 2018-12-07 12:29 ./usr/share/doc/pymol-dbgsym -> pymol


pymol_2.2.0+dfsg-1.1_armhf.deb
------------------------------

 new Debian package, version 2.0.
 size 3574064 bytes: control archive=7056 bytes.
    1207 bytes,    24 lines      control              
   19656 bytes,   229 lines      md5sums              
     155 bytes,     9 lines   *  postinst             #!/bin/sh
     249 bytes,    14 lines   *  prerm                #!/bin/sh
 Package: pymol
 Version: 2.2.0+dfsg-1.1
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 11977
 Depends: python-numpy (>= 1:1.14.3), python-pmw, python-tk, python-numpy-abi9, python (<< 2.8), python (>= 2.7~), python:any (<< 2.8), python:any (>= 2.7~), freeglut3, libc6 (>= 2.15), libfreetype6 (>= 2.2.1), libgcc1 (>= 1:3.5), libgl1, libglew2.1 (>= 1.12.0), libpng16-16 (>= 1.6.2-1), libstdc++6 (>= 5.2), libxml2 (>= 2.7.4), pymol-data (= 2.2.0+dfsg-1.1)
 Recommends: apbs
 Section: science
 Priority: optional
 Homepage: http://www.pymol.org
 Description: Molecular Graphics System
  PyMOL is a molecular graphics system targeted at medium to large
  biomolecules like proteins. It can generate high-quality publication-ready
  molecular graphics images and animations.
  .
  Features include:
   * Visualization of molecules, molecular trajectories and surfaces
     of crystallography data or orbitals
   * Molecular builder and sculptor
   * Internal raytracer and movie generator
   * Fully extensible and scriptable via a Python interface
  .
  File formats PyMOL can read include PDB, XYZ, CIF, MDL Molfile, ChemDraw,
  CCP4 maps, XPLOR maps and Gaussian cube maps.

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| Post Build                                                                   |
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+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
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Build Architecture: armhf
Build-Space: 308276
Build-Time: 1576
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 1479
Job: pymol_2.2.0+dfsg-1.1
Machine Architecture: armhf
Package: pymol
Package-Time: 3109
Source-Version: 2.2.0+dfsg-1.1
Space: 308276
Status: successful
Version: 2.2.0+dfsg-1.1
--------------------------------------------------------------------------------
Finished at 2018-12-09T11:33:03Z
Build needed 00:51:49, 308276k disc space

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