plink1.9 →
1.90~b6.18-200616-1 →
armhf → 2020-07-09 05:18:44
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-03
+==============================================================================+
| plink1.9 1.90~b6.18-200616-1 (armhf) Thu, 09 Jul 2020 05:07:42 +0000 |
+==============================================================================+
Package: plink1.9
Version: 1.90~b6.18-200616-1
Source Version: 1.90~b6.18-200616-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-ea4c43b6-16dd-4b62-a57f-51f6ba684009' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.7 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.8 MB]
Fetched 24.6 MB in 25s (969 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'plink1.9' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/plink1-9.git
Please use:
git clone https://salsa.debian.org/med-team/plink1-9.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 783 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main plink1.9 1.90~b6.18-200616-1 (dsc) [2140 B]
Get:2 http://172.17.0.1/private bullseye-staging/main plink1.9 1.90~b6.18-200616-1 (tar) [735 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main plink1.9 1.90~b6.18-200616-1 (diff) [45.3 kB]
Fetched 783 kB in 0s (5227 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/plink1.9-7dCr8E/plink1.9-1.90~b6.18-200616' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/plink1.9-7dCr8E' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-6dIRNl/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-6dIRNl/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-6dIRNl/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-6dIRNl/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-6dIRNl/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-6dIRNl/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-6dIRNl/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-6dIRNl/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2827 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 32 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-6dIRNl/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (23.0 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12231 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any-amd64 any-i386 armel armhf mipsel)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), libatlas-base-dev, liblapack-dev, zlib1g-dev
Filtered Build-Depends: debhelper-compat (= 13), libatlas-base-dev, liblapack-dev, zlib1g-dev
dpkg-deb: building package 'sbuild-build-depends-plink1.9-dummy' in '/<<BUILDDIR>>/resolver-6dIRNl/apt_archive/sbuild-build-depends-plink1.9-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-plink1.9-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-6dIRNl/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-6dIRNl/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-6dIRNl/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-6dIRNl/apt_archive ./ Sources [517 B]
Get:5 copy:/<<BUILDDIR>>/resolver-6dIRNl/apt_archive ./ Packages [593 B]
Fetched 2443 B in 1s (3264 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install plink1.9 build dependencies (apt-based resolver)
--------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gcc-10-base gettext
gettext-base groff-base intltool-debian libarchive-zip-perl
libatlas-base-dev libatlas3-base libatomic1 libcc1-0 libcroco3
libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libgcc-s1
libgfortran5 libglib2.0-0 libgomp1 libicu67 liblapack-dev liblapack3
libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libstdc++6
libsub-override-perl libtool libubsan1 libuchardet0 libxml2 m4 man-db
po-debconf sensible-utils zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev groff libatlas-doc liblapack-doc
libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less
www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libatlas-base-dev
libatlas3-base libcroco3 libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libgfortran5 libglib2.0-0 libicu67
liblapack-dev liblapack3 libmagic-mgc libmagic1 libpipeline1 libsigsegv2
libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf
sbuild-build-depends-plink1.9-dummy sensible-utils zlib1g-dev
The following packages will be upgraded:
gcc-10-base libatomic1 libcc1-0 libgcc-s1 libgomp1 libstdc++6 libubsan1
7 upgraded, 40 newly installed, 0 to remove and 25 not upgraded.
Need to get 29.5 MB of archives.
After this operation, 119 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-6dIRNl/apt_archive ./ sbuild-build-depends-plink1.9-dummy 0.invalid.0 [884 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf bsdextrautils armhf 2.35.2-6 [122 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libatomic1 armhf 10.1.0-4+rpi1 [8180 B]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libubsan1 armhf 10.1.0-4+rpi1 [115 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libgomp1 armhf 10.1.0-4+rpi1 [83.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf gcc-10-base armhf 10.1.0-4+rpi1 [198 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libgcc-s1 armhf 10.1.0-4+rpi1 [36.0 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf libcc1-0 armhf 10.1.0-4+rpi1 [31.7 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libstdc++6 armhf 10.1.0-4+rpi1 [408 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-1 [1269 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-3 [801 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.2 [187 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.8.1-2 [38.2 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.8.1-2 [15.1 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.64.3-2 [1158 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-2 [8286 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-5+b1 [593 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.2 [1007 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.1.0-4+rpi1 [231 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libatlas3-base armhf 3.10.3-10+rpi1 [2454 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libatlas-base-dev armhf 3.10.3-10+rpi1 [2601 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-2 [1602 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.9.0-2 [2981 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 29.5 MB in 3s (9846 kB/s)
Selecting previously unselected package bsdextrautils.
(Reading database ... 12231 files and directories currently installed.)
Preparing to unpack .../bsdextrautils_2.35.2-6_armhf.deb ...
Unpacking bsdextrautils (2.35.2-6) ...
Preparing to unpack .../libatomic1_10.1.0-4+rpi1_armhf.deb ...
Unpacking libatomic1:armhf (10.1.0-4+rpi1) over (10.1.0-3+rpi1) ...
Preparing to unpack .../libubsan1_10.1.0-4+rpi1_armhf.deb ...
Unpacking libubsan1:armhf (10.1.0-4+rpi1) over (10.1.0-3+rpi1) ...
Preparing to unpack .../libgomp1_10.1.0-4+rpi1_armhf.deb ...
Unpacking libgomp1:armhf (10.1.0-4+rpi1) over (10.1.0-3+rpi1) ...
Preparing to unpack .../gcc-10-base_10.1.0-4+rpi1_armhf.deb ...
Unpacking gcc-10-base:armhf (10.1.0-4+rpi1) over (10.1.0-3+rpi1) ...
Setting up gcc-10-base:armhf (10.1.0-4+rpi1) ...
(Reading database ... 12253 files and directories currently installed.)
Preparing to unpack .../libgcc-s1_10.1.0-4+rpi1_armhf.deb ...
Unpacking libgcc-s1:armhf (10.1.0-4+rpi1) over (10.1.0-3+rpi1) ...
Setting up libgcc-s1:armhf (10.1.0-4+rpi1) ...
(Reading database ... 12253 files and directories currently installed.)
Preparing to unpack .../libcc1-0_10.1.0-4+rpi1_armhf.deb ...
Unpacking libcc1-0:armhf (10.1.0-4+rpi1) over (10.1.0-3+rpi1) ...
Preparing to unpack .../libstdc++6_10.1.0-4+rpi1_armhf.deb ...
Unpacking libstdc++6:armhf (10.1.0-4+rpi1) over (10.1.0-3+rpi1) ...
Setting up libstdc++6:armhf (10.1.0-4+rpi1) ...
Selecting previously unselected package libuchardet0:armhf.
(Reading database ... 12253 files and directories currently installed.)
Preparing to unpack .../00-libuchardet0_0.0.7-1_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../01-groff-base_1.22.4-5_armhf.deb ...
Unpacking groff-base (1.22.4-5) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../02-libpipeline1_1.5.2-2_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.2-2) ...
Selecting previously unselected package man-db.
Preparing to unpack .../03-man-db_2.9.3-1_armhf.deb ...
Unpacking man-db (2.9.3-1) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../04-sensible-utils_0.0.12+nmu1_all.deb ...
Unpacking sensible-utils (0.0.12+nmu1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../05-libmagic-mgc_1%3a5.38-5_armhf.deb ...
Unpacking libmagic-mgc (1:5.38-5) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../06-libmagic1_1%3a5.38-5_armhf.deb ...
Unpacking libmagic1:armhf (1:5.38-5) ...
Selecting previously unselected package file.
Preparing to unpack .../07-file_1%3a5.38-5_armhf.deb ...
Unpacking file (1:5.38-5) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../08-gettext-base_0.19.8.1-10_armhf.deb ...
Unpacking gettext-base (0.19.8.1-10) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../09-libsigsegv2_2.12-2_armhf.deb ...
Unpacking libsigsegv2:armhf (2.12-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../10-m4_1.4.18-4_armhf.deb ...
Unpacking m4 (1.4.18-4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../11-autoconf_2.69-11.1_all.deb ...
Unpacking autoconf (2.69-11.1) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../12-autotools-dev_20180224.1_all.deb ...
Unpacking autotools-dev (20180224.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../13-automake_1%3a1.16.2-3_all.deb ...
Unpacking automake (1:1.16.2-3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../14-autopoint_0.19.8.1-10_all.deb ...
Unpacking autopoint (0.19.8.1-10) ...
Selecting previously unselected package libtool.
Preparing to unpack .../15-libtool_2.4.6-14_all.deb ...
Unpacking libtool (2.4.6-14) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../16-dh-autoreconf_19_all.deb ...
Unpacking dh-autoreconf (19) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../17-libdebhelper-perl_13.2_all.deb ...
Unpacking libdebhelper-perl (13.2) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../19-libsub-override-perl_0.09-2_all.deb ...
Unpacking libsub-override-perl (0.09-2) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.8.1-2_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.8.1-2) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../21-dh-strip-nondeterminism_1.8.1-2_all.deb ...
Unpacking dh-strip-nondeterminism (1.8.1-2) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../22-libelf1_0.176-1.1_armhf.deb ...
Unpacking libelf1:armhf (0.176-1.1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../23-dwz_0.13-5_armhf.deb ...
Unpacking dwz (0.13-5) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../24-libglib2.0-0_2.64.3-2_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.64.3-2) ...
Selecting previously unselected package libicu67:armhf.
Preparing to unpack .../25-libicu67_67.1-2_armhf.deb ...
Unpacking libicu67:armhf (67.1-2) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../26-libxml2_2.9.10+dfsg-5+b1_armhf.deb ...
Unpacking libxml2:armhf (2.9.10+dfsg-5+b1) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../27-libcroco3_0.6.13-1_armhf.deb ...
Unpacking libcroco3:armhf (0.6.13-1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../28-gettext_0.19.8.1-10_armhf.deb ...
Unpacking gettext (0.19.8.1-10) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../29-intltool-debian_0.35.0+20060710.5_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.5) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../30-po-debconf_1.0.21_all.deb ...
Unpacking po-debconf (1.0.21) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../31-debhelper_13.2_all.deb ...
Unpacking debhelper (13.2) ...
Selecting previously unselected package libgfortran5:armhf.
Preparing to unpack .../32-libgfortran5_10.1.0-4+rpi1_armhf.deb ...
Unpacking libgfortran5:armhf (10.1.0-4+rpi1) ...
Selecting previously unselected package libatlas3-base:armhf.
Preparing to unpack .../33-libatlas3-base_3.10.3-10+rpi1_armhf.deb ...
Unpacking libatlas3-base:armhf (3.10.3-10+rpi1) ...
Selecting previously unselected package libatlas-base-dev:armhf.
Preparing to unpack .../34-libatlas-base-dev_3.10.3-10+rpi1_armhf.deb ...
Unpacking libatlas-base-dev:armhf (3.10.3-10+rpi1) ...
Selecting previously unselected package liblapack3:armhf.
Preparing to unpack .../35-liblapack3_3.9.0-2_armhf.deb ...
Unpacking liblapack3:armhf (3.9.0-2) ...
Selecting previously unselected package liblapack-dev:armhf.
Preparing to unpack .../36-liblapack-dev_3.9.0-2_armhf.deb ...
Unpacking liblapack-dev:armhf (3.9.0-2) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../37-zlib1g-dev_1%3a1.2.11.dfsg-2_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Selecting previously unselected package sbuild-build-depends-plink1.9-dummy.
Preparing to unpack .../38-sbuild-build-depends-plink1.9-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-plink1.9-dummy (0.invalid.0) ...
Setting up libpipeline1:armhf (1.5.2-2) ...
Setting up bsdextrautils (2.35.2-6) ...
Setting up libicu67:armhf (67.1-2) ...
Setting up libmagic-mgc (1:5.38-5) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.64.3-2) ...
No schema files found: doing nothing.
Setting up libdebhelper-perl (13.2) ...
Setting up libmagic1:armhf (1:5.38-5) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up file (1:5.38-5) ...
Setting up libgomp1:armhf (10.1.0-4+rpi1) ...
Setting up autotools-dev (20180224.1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libatomic1:armhf (10.1.0-4+rpi1) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up libgfortran5:armhf (10.1.0-4+rpi1) ...
Setting up libubsan1:armhf (10.1.0-4+rpi1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libxml2:armhf (2.9.10+dfsg-5+b1) ...
Setting up libcc1-0:armhf (10.1.0-4+rpi1) ...
Setting up libfile-stripnondeterminism-perl (1.8.1-2) ...
Setting up libatlas3-base:armhf (3.10.3-10+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libtool (2.4.6-14) ...
Setting up m4 (1.4.18-4) ...
Setting up libatlas-base-dev:armhf (3.10.3-10+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.8.1-2) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up automake (1:1.16.2-3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up liblapack3:armhf (3.9.0-2) ...
Setting up gettext (0.19.8.1-10) ...
Setting up man-db (2.9.3-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up liblapack-dev:armhf (3.9.0-2) ...
Setting up po-debconf (1.0.21) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (13.2) ...
Setting up sbuild-build-depends-plink1.9-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.30-8+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.34-8+rpi1 dpkg-dev_1.19.7 g++-9_9.3.0-13+rpi1 gcc-9_9.3.0-13+rpi1 libc6-dev_2.30-8+rpi1 libstdc++-9-dev_9.3.0-13+rpi1 libstdc++6_10.1.0-4+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_2.1.6 autoconf_2.69-11.1 automake_1:1.16.2-3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-8+rpi1 binutils-arm-linux-gnueabihf_2.34-8+rpi1 binutils-common_2.34-8+rpi1 bsdextrautils_2.35.2-6 bsdutils_1:2.35.2-2 build-essential_12.8 bzip2_1.0.8-3 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.3.0-13+rpi1 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.8.1-2 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.2-2 file_1:5.38-5 findutils_4.7.0-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.3.0-13+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-10-base_10.1.0-4+rpi1 gcc-6-base_6.5.0-1+rpi3 gcc-7-base_7.5.0-6+rpi1 gcc-8-base_8.4.0-4+rpi1 gcc-9_9.3.0-13+rpi1 gcc-9-base_9.3.0-13+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg6.0_2.1.6 libarchive-zip-perl_1.68-1 libasan5_9.3.0-13+rpi1 libassuan0_2.5.3-7 libatlas-base-dev_3.10.3-10+rpi1 libatlas3-base_3.10.3-10+rpi1 libatomic1_10.1.0-4+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.34-8+rpi1 libblkid1_2.35.2-2 libbz2-1.0_1.0.8-3 libc-bin_2.30-8+rpi1 libc-dev-bin_2.30-8+rpi1 libc6_2.30-8+rpi1 libc6-dev_2.30-8+rpi1 libcap-ng0_0.7.9-2.2 libcc1-0_10.1.0-4+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.34-8+rpi1 libctf0_2.34-8+rpi1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.252 libdebhelper-perl_13.2 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.35.2-2 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.8.1-2 libgcc-9-dev_9.3.0-13+rpi1 libgcc-s1_10.1.0-4+rpi1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran5_10.1.0-4+rpi1 libglib2.0-0_2.64.3-2 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.14-1 libgomp1_10.1.0-4+rpi1 libgpg-error0_1.37-1 libhogweed5_3.5.1+really3.5.1-2 libicu67_67.1-2 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libksba8_1.4.0-2 liblapack-dev_3.9.0-2 liblapack3_3.9.0-2 libldap-2.4-2_2.4.50+dfsg-1 libldap-common_2.4.50+dfsg-1 liblocale-gettext-perl_1.07-4 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.35.2-2 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnpth0_1.6-1 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12 libperl5.30_5.30.3-4 libpipeline1_1.5.2-2 libreadline8_8.0-4 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.0-1+b1 libsemanage-common_3.0-1 libsemanage1_3.0-1+b1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.35.2-2 libsqlite3-0_3.31.1-5 libss2_1.45.6-1 libstdc++-9-dev_9.3.0-13+rpi1 libstdc++6_10.1.0-4+rpi1 libsub-override-perl_0.09-2 libsystemd0_245.6-1+rpi1 libtasn1-6_4.16.0-2 libtext-charwidth-perl_0.04-10 libtext-iconv-perl_1.7-7 libtinfo6_6.2-1 libtool_2.4.6-14 libubsan1_10.1.0-4+rpi1 libuchardet0_0.0.7-1 libudev1_245.6-1+rpi1 libunistring2_0.9.10-4 libuuid1_2.35.2-2 libxml2_2.9.10+dfsg-5+b1 libzstd1_1.4.5+dfsg-2+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-2 man-db_2.9.3-1 mawk_1.3.4.20200120-2 mount_2.35.2-2 ncurses-base_6.2-1 ncurses-bin_6.2-1 netbase_6.1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-4 po-debconf_1.0.21 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-plink1.9-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2020a-1 util-linux_2.35.2-2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Mon Jul 6 13:58:39 2020 UTC
gpgv: using RSA key 9A3C07BD06DE2F416E813A5D612EF1613E050F54
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./plink1.9_1.90~b6.18-200616-1.dsc
dpkg-source: info: extracting plink1.9 in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking plink1.9_1.90~b6.18-200616.orig.tar.xz
dpkg-source: info: unpacking plink1.9_1.90~b6.18-200616-1.debian.tar.xz
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-ea4c43b6-16dd-4b62-a57f-51f6ba684009
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package plink1.9
dpkg-buildpackage: info: source version 1.90~b6.18-200616-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
make -j4 clean
make[2]: Entering directory '/<<PKGBUILDDIR>>'
rm -f plink.o plink_assoc.o plink_calc.o plink_cluster.o plink_cnv.o plink_common.o plink_data.o plink_dosage.o plink_family.o plink_filter.o plink_glm.o plink_help.o plink_homozyg.o plink_lasso.o plink_ld.o plink_matrix.o plink_misc.o plink_perm.o plink_rserve.o plink_set.o plink_stats.o SFMT.o dcdflib.o pigz.o yarn.o Rconnection.o hfile.o bgzf.o plink plinkw
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
rm -f plink1.9
rm -f plink1.9.1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build
make -j4 "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<<PKGBUILDDIR>>'
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink.c -o plink.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_assoc.c -o plink_assoc.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_calc.c -o plink_calc.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_cluster.c -o plink_cluster.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_cnv.c -o plink_cnv.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_common.c -o plink_common.o
plink.c: In function 'int32_t main(int32_t, char**)':
plink.c:6853:25: warning: 'int __builtin_memcmp_eq(const void*, const void*, unsigned int)' reading 22 bytes from a region of size 19 [-Wstringop-overflow=]
6853 | } else if (!memcmp(argptr2, "lip-scan-window-kb", 22)) {
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
plink.c:10750:25: warning: 'int __builtin_memcmp_eq(const void*, const void*, unsigned int)' reading 19 bytes from a region of size 16 [-Wstringop-overflow=]
10750 | } else if (!memcmp(argptr2, "ead-genome-list", 19)) {
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_data.c -o plink_data.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_dosage.c -o plink_dosage.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_family.c -o plink_family.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_filter.c -o plink_filter.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_glm.c -o plink_glm.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_help.c -o plink_help.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_homozyg.c -o plink_homozyg.o
In file included from /usr/include/string.h:495,
from plink_common.h:27,
from plink_glm.c:18:
In function 'void* memcpy(void*, const void*, size_t)',
inlined from 'int32_t glm_linear_nosnp(pthread_t*, FILE*, uintptr_t, char*, char*, uint32_t, double, uint32_t, uint32_t, Range_list*, Range_list*, double, double, double, double, uintptr_t, uintptr_t*, uintptr_t, char*, uintptr_t, uintptr_t*, char*, char*, Chrom_info*, uintptr_t, uintptr_t, uintptr_t*, uint32_t, uint32_t*, uint32_t*, uint32_t, uint32_t, uintptr_t*, double*, uintptr_t, char*, uintptr_t, uintptr_t*, double*, uintptr_t*, uintptr_t*, uint32_t, uint32_t, Set_info*)' at plink_glm.c:7845:8:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:34:33: warning: 'void* __builtin_memcpy(void*, const void*, unsigned int)' reading 17 bytes from a region of size 16 [-Wstringop-overflow=]
34 | return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
| ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_lasso.c -o plink_lasso.o
In function 'void* memcpy(void*, const void*, size_t)',
inlined from 'int32_t glm_logistic_nosnp(pthread_t*, FILE*, uintptr_t, char*, char*, uint32_t, double, uint32_t, uint32_t, Range_list*, Range_list*, double, double, double, double, uintptr_t, uintptr_t*, uintptr_t, char*, uintptr_t, uintptr_t*, char*, char*, Chrom_info*, uintptr_t, uintptr_t, uintptr_t*, uint32_t, uint32_t*, uint32_t*, uint32_t, uint32_t, uintptr_t*, uintptr_t*, uintptr_t, char*, uintptr_t, uintptr_t*, double*, uintptr_t*, uintptr_t*, uint32_t, uint32_t, Set_info*)' at plink_glm.c:8629:8:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:34:33: warning: 'void* __builtin_memcpy(void*, const void*, unsigned int)' reading 17 bytes from a region of size 16 [-Wstringop-overflow=]
34 | return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
| ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_ld.c -o plink_ld.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_matrix.c -o plink_matrix.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_misc.c -o plink_misc.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_perm.c -o plink_perm.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_rserve.c -o plink_rserve.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_set.c -o plink_set.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security plink_stats.c -o plink_stats.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security SFMT.c -o SFMT.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security dcdflib.c -o dcdflib.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security pigz.c -o pigz.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security yarn.c -o yarn.o
g++ -x c++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security Rconnection.cc -o Rconnection.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security hfile.c -o hfile.o
g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -DSTABLE_BUILD -DDYNAMIC_ZLIB -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security bgzf.c -o bgzf.o
g++ plink.o plink_assoc.o plink_calc.o plink_cluster.o plink_cnv.o plink_common.o plink_data.o plink_dosage.o plink_family.o plink_filter.o plink_glm.o plink_help.o plink_homozyg.o plink_lasso.o plink_ld.o plink_matrix.o plink_misc.o plink_perm.o plink_rserve.o plink_set.o plink_stats.o SFMT.o dcdflib.o pigz.o yarn.o Rconnection.o hfile.o bgzf.o -L/usr/lib64/atlas -llapack -lblas -lcblas -latlas -lm -lpthread -ldl `dpkg-buildflags --get LDFLAGS` -L. -lz -o plink
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
mv plink plink1.9
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
create-stamp debian/debhelper-build-stamp
dh_testroot -a
dh_prep -a
dh_install -a
dh_installdocs -a
debian/rules override_dh_installchangelogs
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_installchangelogs debian/upstream.docs/upstream.changelog
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installexamples -a
debian/rules override_dh_installman
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_installman debian/plink1.9.1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_dwz -a -a
dh_strip -a -a
dh_makeshlibs -a -a
dh_shlibdeps -a -a
dpkg-shlibdeps: warning: debian/plink1.9/usr/lib/debian-med/bin/plink1.9 contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/plink1.9/usr/lib/debian-med/bin/plink1.9 was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'plink1.9' in '../plink1.9_1.90~b6.18-200616-1_armhf.deb'.
dpkg-deb: building package 'plink1.9-dbgsym' in '../plink1.9-dbgsym_1.90~b6.18-200616-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../plink1.9_1.90~b6.18-200616-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-07-09T05:18:36Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
plink1.9_1.90~b6.18-200616-1_armhf.changes:
-------------------------------------------
Format: 1.8
Date: Mon, 06 Jul 2020 15:51:52 +0200
Source: plink1.9
Binary: plink1.9 plink1.9-dbgsym
Architecture: armhf
Version: 1.90~b6.18-200616-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Dylan Aïssi <daissi@debian.org>
Description:
plink1.9 - whole-genome association analysis toolset
Changes:
plink1.9 (1.90~b6.18-200616-1) unstable; urgency=medium
.
* New upstream release.
* debhelper-compat 13 (routine-update)
Checksums-Sha1:
218f9a13f763a3ec19d7be66924dd09953cd0f42 2704136 plink1.9-dbgsym_1.90~b6.18-200616-1_armhf.deb
e3475ac3194d76c94d983ec6582fddd9e36d4d18 4775 plink1.9_1.90~b6.18-200616-1_armhf.buildinfo
87bba1719f4610ff0254d6495b95d74a3ec1afcf 737340 plink1.9_1.90~b6.18-200616-1_armhf.deb
Checksums-Sha256:
8c45016a67ea8be3dfeb7237cb4bafdc1c4d9ee2314c74cc9b9ed72e7d89bfc4 2704136 plink1.9-dbgsym_1.90~b6.18-200616-1_armhf.deb
cd9e4efecde2a36f6b1f1592518aa79d9bd5309bd87e4287c499d8efeb727501 4775 plink1.9_1.90~b6.18-200616-1_armhf.buildinfo
0b172f70bd90fdae167ec94ea665f24d894022c3202569e4484455517668ef95 737340 plink1.9_1.90~b6.18-200616-1_armhf.deb
Files:
32a333625848814f395fc5e659959765 2704136 debug optional plink1.9-dbgsym_1.90~b6.18-200616-1_armhf.deb
2332da7c9d90c0bf268187761d8df15d 4775 science optional plink1.9_1.90~b6.18-200616-1_armhf.buildinfo
71402c3605332cb1ebd94e3557fda1d1 737340 science optional plink1.9_1.90~b6.18-200616-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
plink1.9-dbgsym_1.90~b6.18-200616-1_armhf.deb
---------------------------------------------
new Debian package, version 2.0.
size 2704136 bytes: control archive=548 bytes.
399 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: plink1.9-dbgsym
Source: plink1.9
Version: 1.90~b6.18-200616-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 2776
Depends: plink1.9 (= 1.90~b6.18-200616-1)
Section: debug
Priority: optional
Description: debug symbols for plink1.9
Build-Ids: 966a9b6eca70141caaa0ae5bb00683c8c39e1b36
drwxr-xr-x root/root 0 2020-07-06 13:51 ./
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/lib/
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/lib/debug/.build-id/96/
-rw-r--r-- root/root 2831952 2020-07-06 13:51 ./usr/lib/debug/.build-id/96/6a9b6eca70141caaa0ae5bb00683c8c39e1b36.debug
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/share/
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-07-06 13:51 ./usr/share/doc/plink1.9-dbgsym -> plink1.9
plink1.9_1.90~b6.18-200616-1_armhf.deb
--------------------------------------
new Debian package, version 2.0.
size 737340 bytes: control archive=1344 bytes.
1250 bytes, 25 lines control
897 bytes, 12 lines md5sums
Package: plink1.9
Version: 1.90~b6.18-200616-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1798
Depends: libblas3 | libblas.so.3, libc6 (>= 2.29), libgcc-s1 (>= 3.5), liblapack3 | liblapack.so.3, libstdc++6 (>= 5), zlib1g (>= 1:1.2.6)
Section: science
Priority: optional
Homepage: https://www.cog-genomics.org/plink/1.9/
Description: whole-genome association analysis toolset
plink expects as input the data from SNP (single nucleotide polymorphism)
chips of many individuals and their phenotypical description of a disease.
It finds associations of single or pairs of DNA variations with a phenotype
and can retrieve SNP annotation from an online source.
.
SNPs can evaluated individually or as pairs for their association with the
disease phenotypes. The joint investigation of copy number variations is
supported. A variety of statistical tests have been implemented.
.
plink1.9 is a comprehensive update of plink with new algorithms and new
methods, faster and less memory consumer than the first plink.
.
Please note: The executable was renamed to plink1.9
because of a name clash. Please read more about this
in /usr/share/doc/plink1.9/README.Debian.
drwxr-xr-x root/root 0 2020-07-06 13:51 ./
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/bin/
lrwxrwxrwx root/root 0 2020-07-06 13:51 ./usr/bin/plink1.9 -> ../lib/debian-med/bin/plink1.9
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/lib/
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/lib/debian-med/
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/lib/debian-med/bin/
-rwxr-xr-x root/root 1759940 2020-07-06 13:51 ./usr/lib/debian-med/bin/plink1.9
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/lib/debian-med/share/
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/lib/debian-med/share/man/
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/lib/debian-med/share/man/man1/
lrwxrwxrwx root/root 0 2020-07-06 13:51 ./usr/lib/debian-med/share/man/man1/plink1.9.1.gz -> ../../../../../share/man/man1/plink1.9.1.gz
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/share/
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/share/doc/plink1.9/
-rw-r--r-- root/root 680 2020-07-06 13:51 ./usr/share/doc/plink1.9/README.Debian
-rw-r--r-- root/root 3094 2020-07-06 13:51 ./usr/share/doc/plink1.9/changelog.Debian.gz
-rw-r--r-- root/root 13752 2020-07-06 13:51 ./usr/share/doc/plink1.9/changelog.gz
-rw-r--r-- root/root 7739 2020-07-06 13:51 ./usr/share/doc/plink1.9/copyright
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/share/doc/plink1.9/examples/
-rw-r--r-- root/root 325 2020-07-06 13:51 ./usr/share/doc/plink1.9/examples/README
-rw-r--r-- root/root 267 2020-07-06 13:51 ./usr/share/doc/plink1.9/examples/expected.plink.assoc
-rw-r--r-- root/root 126 2020-07-06 13:51 ./usr/share/doc/plink1.9/examples/expected.plink.frq
-rw-r--r-- root/root 566 2020-07-06 13:51 ./usr/share/doc/plink1.9/examples/run-sample-analysis
-rw-r--r-- root/root 27 2020-07-06 13:51 ./usr/share/doc/plink1.9/examples/toy.map
-rw-r--r-- root/root 58 2020-07-06 13:51 ./usr/share/doc/plink1.9/examples/toy.ped
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/share/man/
drwxr-xr-x root/root 0 2020-07-06 13:51 ./usr/share/man/man1/
-rw-r--r-- root/root 28373 2020-07-06 13:51 ./usr/share/man/man1/plink1.9.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 37692
Build-Time: 359
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 245
Job: plink1.9_1.90~b6.18-200616-1
Machine Architecture: armhf
Package: plink1.9
Package-Time: 654
Source-Version: 1.90~b6.18-200616-1
Space: 37692
Status: successful
Version: 1.90~b6.18-200616-1
--------------------------------------------------------------------------------
Finished at 2020-07-09T05:18:36Z
Build needed 00:10:54, 37692k disc space