pdb2pqr →
2.1.0+dfsg-1 →
armhf → 2016-01-14 10:47:42
sbuild (Debian sbuild) 0.65.2 (24 Mar 2015) on bm-wb-02
╔══════════════════════════════════════════════════════════════════════════════╗
║ pdb2pqr 2.1.0+dfsg-1 (armhf) 14 Jan 2016 10:34 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: pdb2pqr
Version: 2.1.0+dfsg-1
Source Version: 2.1.0+dfsg-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/pdb2pqr-jyR21c/pdb2pqr-2.1.0+dfsg' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/pdb2pqr-jyR21c' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-a68b9ee3-753a-4630-82f6-acb26a5f5434' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
└──────────────────────────────────────────────────────────────────────────────┘
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [8612 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [10.6 MB]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files │
└──────────────────────────────────────────────────────────────────────────────┘
Check APT
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Checking available source versions...
Download source files with APT
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Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'pdb2pqr' packaging is maintained in the 'Git' version control system at:
git://anonscm.debian.org/debian-med/pdb2pqr.git
Please use:
git clone git://anonscm.debian.org/debian-med/pdb2pqr.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 5058 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main pdb2pqr 2.1.0+dfsg-1 (dsc) [2124 B]
Get:2 http://172.17.0.1/private stretch-staging/main pdb2pqr 2.1.0+dfsg-1 (tar) [5046 kB]
Get:3 http://172.17.0.1/private stretch-staging/main pdb2pqr 2.1.0+dfsg-1 (diff) [10.3 kB]
Fetched 5058 kB in 0s (9287 kB/s)
Download complete and in download only mode
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Check dependencies
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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/«BUILDDIR»/resolver-f0AuR7/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Get:1 file:/«BUILDDIR»/resolver-f0AuR7/apt_archive ./ InRelease
Ign:1 file:/«BUILDDIR»/resolver-f0AuR7/apt_archive ./ InRelease
Get:2 file:/«BUILDDIR»/resolver-f0AuR7/apt_archive ./ Release [2119 B]
Get:2 file:/«BUILDDIR»/resolver-f0AuR7/apt_archive ./ Release [2119 B]
Get:3 file:/«BUILDDIR»/resolver-f0AuR7/apt_archive ./ Release.gpg [299 B]
Get:3 file:/«BUILDDIR»/resolver-f0AuR7/apt_archive ./ Release.gpg [299 B]
Get:4 file:/«BUILDDIR»/resolver-f0AuR7/apt_archive ./ Sources [188 B]
Get:5 file:/«BUILDDIR»/resolver-f0AuR7/apt_archive ./ Packages [507 B]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libapt-pkg4.16 libisl13 libprocps4
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 7 not upgraded.
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debconf: delaying package configuration, since apt-utils is not installed
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Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), gfortran, swig, xmlto, openbabel, python-dev, python-numpy, scons
Filtered Build-Depends: libc6-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), gfortran, swig, xmlto, openbabel, python-dev, python-numpy, scons
dpkg-deb: building package 'sbuild-build-depends-pdb2pqr-dummy' in '/«BUILDDIR»/resolver-yN897c/apt_archive/sbuild-build-depends-pdb2pqr-dummy.deb'.
OK
Get:1 file:/«BUILDDIR»/resolver-yN897c/apt_archive ./ InRelease
Ign:1 file:/«BUILDDIR»/resolver-yN897c/apt_archive ./ InRelease
Get:2 file:/«BUILDDIR»/resolver-yN897c/apt_archive ./ Release [2119 B]
Get:2 file:/«BUILDDIR»/resolver-yN897c/apt_archive ./ Release [2119 B]
Get:3 file:/«BUILDDIR»/resolver-yN897c/apt_archive ./ Release.gpg [299 B]
Get:3 file:/«BUILDDIR»/resolver-yN897c/apt_archive ./ Release.gpg [299 B]
Get:4 file:/«BUILDDIR»/resolver-yN897c/apt_archive ./ Sources [334 B]
Get:5 file:/«BUILDDIR»/resolver-yN897c/apt_archive ./ Packages [594 B]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install pdb2pqr build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libapt-pkg4.16 libisl13 libprocps4
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
bsdmainutils debhelper dh-strip-nondeterminism docbook-xml docbook-xsl file
fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-5
groff-base intltool-debian libarchive-zip-perl libblas-common libblas3
libcairo2 libcroco3 libexpat1 libexpat1-dev libffi6
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6
libgfortran-5-dev libgfortran3 libglib2.0-0 libicu55 liblapack3 libmagic1
libopenbabel4v5 libpipeline1 libpixman-1-0 libpython-dev libpython-stdlib
libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib
libsqlite3-0 libssl1.0.2 libunistring0 libx11-6 libx11-data libxau6
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxml2-utils
libxrender1 libxslt1.1 man-db mime-support openbabel po-debconf python
python-dev python-minimal python-numpy python2.7 python2.7-dev
python2.7-minimal scons sgml-base sgml-data swig swig3.0 ucf xml-core xmlto
xsltproc
Suggested packages:
wamerican | wordlist whois vacation dh-make docbook docbook-dsssl
docbook-defguide dbtoepub docbook-xsl-doc-html | docbook-xsl-doc-pdf
| docbook-xsl-doc-text | docbook-xsl-doc docbook-xsl-saxon fop libsaxon-java
libxalan2-java libxslthl-java xalan gettext-doc autopoint libasprintf-dev
libgettextpo-dev gfortran-doc gfortran-5-doc libgfortran3-dbg groff less
www-browser libmail-box-perl python-doc python-tk python-nose
python-numpy-dbg python-numpy-doc python2.7-doc binfmt-support sgml-base-doc
perlsgml w3-recs opensp swig-doc swig-examples swig3.0-examples swig3.0-doc
w3m | lynx-cur | links xmltex
Recommended packages:
curl | wget | lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs
libmail-sendmail-perl dblatex | fop libpaper-utils zip
The following NEW packages will be installed:
bsdmainutils debhelper dh-strip-nondeterminism docbook-xml docbook-xsl file
fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-5
groff-base intltool-debian libarchive-zip-perl libblas-common libblas3
libcairo2 libcroco3 libexpat1 libexpat1-dev libffi6
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6
libgfortran-5-dev libgfortran3 libglib2.0-0 libicu55 liblapack3 libmagic1
libopenbabel4v5 libpipeline1 libpixman-1-0 libpython-dev libpython-stdlib
libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib
libsqlite3-0 libssl1.0.2 libunistring0 libx11-6 libx11-data libxau6
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxml2-utils
libxrender1 libxslt1.1 man-db mime-support openbabel po-debconf python
python-dev python-minimal python-numpy python2.7 python2.7-dev
python2.7-minimal sbuild-build-depends-pdb2pqr-dummy scons sgml-base
sgml-data swig swig3.0 ucf xml-core xmlto xsltproc
0 upgraded, 76 newly installed, 0 to remove and 7 not upgraded.
Need to get 87.9 MB/87.9 MB of archives.
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Get:1 file:/«BUILDDIR»/resolver-yN897c/apt_archive ./ sbuild-build-depends-pdb2pqr-dummy 0.invalid.0 [848 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-5 [1083 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.6 [177 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-minimal armhf 2.7.11-2 [380 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf python2.7-minimal armhf 2.7.11-2 [1081 kB]
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Get:14 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-stdlib armhf 2.7.11-2 [1836 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf python2.7 armhf 2.7.11-2 [266 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf libpython-stdlib armhf 2.7.11-1 [19.5 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf python armhf 2.7.11-1 [150 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf libfreetype6 armhf 2.6.1-0.1 [411 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf ucf all 3.0031 [68.9 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf fonts-dejavu-core all 2.35-1 [1064 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf fontconfig-config all 2.11.0-6.3 [273 kB]
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Get:34 http://172.17.0.1/private stretch-staging/main armhf libpython2.7 armhf 2.7.11-2 [909 kB]
Get:35 http://172.17.0.1/private stretch-staging/main armhf libicu55 armhf 55.1-7 [7380 kB]
Get:36 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.3+dfsg1-1 [800 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.46.2-3 [2482 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-1 [131 kB]
Get:39 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.7-2 [1400 kB]
Get:40 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.18 [248 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.56-2 [94.9 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.014-1 [10.6 kB]
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Get:45 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20151225 [830 kB]
Get:46 http://172.17.0.1/private stretch-staging/main armhf xml-core all 0.13+nmu2 [24.2 kB]
Get:47 http://172.17.0.1/private stretch-staging/main armhf sgml-data all 2.0.10 [181 kB]
Get:48 http://172.17.0.1/private stretch-staging/main armhf docbook-xml all 4.5-7.3 [83.3 kB]
Get:49 http://172.17.0.1/private stretch-staging/main armhf docbook-xsl all 1.78.1+dfsg-1.1 [1230 kB]
Get:50 http://172.17.0.1/private stretch-staging/main armhf libgfortran3 armhf 5.3.1-5+rpi1 [153 kB]
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Get:59 http://172.17.0.1/private stretch-staging/main armhf libxrender1 armhf 1:0.9.9-2 [28.9 kB]
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Get:61 http://172.17.0.1/private stretch-staging/main armhf libexpat1-dev armhf 2.1.0-7 [114 kB]
Get:62 http://172.17.0.1/private stretch-staging/main armhf liblapack3 armhf 3.5.0-5 [1294 kB]
Get:63 http://172.17.0.1/private stretch-staging/main armhf libopenbabel4v5 armhf 2.3.2+dfsg-2.2+b1 [2475 kB]
Get:64 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-dev armhf 2.7.11-2 [27.1 MB]
Get:65 http://172.17.0.1/private stretch-staging/main armhf libpython-dev armhf 2.7.11-1 [19.6 kB]
Get:66 http://172.17.0.1/private stretch-staging/main armhf libxml2-utils armhf 2.9.3+dfsg1-1 [101 kB]
Get:67 http://172.17.0.1/private stretch-staging/main armhf libxslt1.1 armhf 1.1.28-2.1 [211 kB]
Get:68 http://172.17.0.1/private stretch-staging/main armhf openbabel armhf 2.3.2+dfsg-2.2+b1 [250 kB]
Get:69 http://172.17.0.1/private stretch-staging/main armhf python2.7-dev armhf 2.7.11-2 [279 kB]
Get:70 http://172.17.0.1/private stretch-staging/main armhf python-dev armhf 2.7.11-1 [1138 B]
Get:71 http://172.17.0.1/private stretch-staging/main armhf python-numpy armhf 1:1.9.2-5 [1511 kB]
Get:72 http://172.17.0.1/private stretch-staging/main armhf scons all 2.4.1-1 [540 kB]
Get:73 http://172.17.0.1/private stretch-staging/main armhf swig3.0 armhf 3.0.7-2 [1190 kB]
Get:74 http://172.17.0.1/private stretch-staging/main armhf swig armhf 3.0.7-2 [298 kB]
Get:75 http://172.17.0.1/private stretch-staging/main armhf xsltproc armhf 1.1.28-2.1 [118 kB]
Get:76 http://172.17.0.1/private stretch-staging/main armhf xmlto armhf 0.0.28-0.1 [31.8 kB]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.25.90.20160101-1 dpkg-dev_1.18.4 g++-5_5.3.1-5+rpi1 gcc-5_5.3.1-5+rpi1 libc6-dev_2.21-6 libstdc++-4.9-dev_4.9.3-10 libstdc++-5-dev_5.3.1-5+rpi1 libstdc++6_5.3.1-5+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: acl_2.2.52-2 adduser_3.113+nmu3 apt_1.1.10 base-files_9.4+rpi1 base-passwd_3.5.39 bash_4.3-14 binutils_2.25.90.20160101-1 bsdmainutils_9.0.6 bsdutils_1:2.27.1-1 build-essential_11.7 bzip2_1.0.6-8 coreutils_8.23-4 cpio_2.11+dfsg-4.1 cpp_4:5.3.1-1+rpi1 cpp-5_5.3.1-5+rpi1 dash_0.5.7-4 debconf_1.5.58 debfoster_2.7-2 debhelper_9.20151225 debianutils_4.5.1 dh-strip-nondeterminism_0.014-1 diffutils_1:3.3-3 dmsetup_2:1.02.114-1 docbook-xml_4.5-7.3 docbook-xsl_1.78.1+dfsg-1.1 dpkg_1.18.4 dpkg-dev_1.18.4 e2fslibs_1.42.13-1 e2fsprogs_1.42.13-1 fakeroot_1.20.2-1 file_1:5.25-2 findutils_4.4.2-10 fontconfig-config_2.11.0-6.3 fonts-dejavu-core_2.35-1 g++_4:5.3.1-1+rpi1 g++-5_5.3.1-5+rpi1 gcc_4:5.3.1-1+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-3 gcc-4.9-base_4.9.3-10 gcc-5_5.3.1-5+rpi1 gcc-5-base_5.3.1-5+rpi1 gettext_0.19.7-2 gettext-base_0.19.7-2 gfortran_4:5.3.1-1+rpi1 gfortran-5_5.3.1-5+rpi1 gnupg_1.4.20-1 gpgv_1.4.20-1 grep_2.22-1 groff-base_1.22.3-5 gzip_1.6-4 hostname_3.16 init_1.24 init-system-helpers_1.24 initramfs-tools_0.120 initscripts_2.88dsf-59.2 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-4+rpi1 kmod_21-1 libacl1_2.2.52-2 libapparmor1_2.10-2+b3 libapt-pkg4.12_1.0.9.10 libapt-pkg4.16_1.0.10.2 libapt-pkg5.0_1.1.10 libarchive-zip-perl_1.56-2 libasan1_4.9.3-10 libasan2_5.3.1-5+rpi1 libatomic1_5.3.1-5+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.4.5-1 libaudit1_1:2.4.5-1 libblas-common_1.2.20110419-11 libblas3_1.2.20110419-11 libblkid1_2.27.1-1 libbz2-1.0_1.0.6-8 libc-bin_2.21-6 libc-dev-bin_2.21-6 libc6_2.21-6 libc6-dev_2.21-6 libcairo2_1.14.4-1 libcap2_1:2.24-12 libcap2-bin_1:2.24-12 libcc1-0_5.3.1-5+rpi1 libcomerr2_1.42.13-1 libcroco3_0.6.11-1 libcryptsetup4_2:1.6.6-5 libdb5.3_5.3.28-11 libdbus-1-3_1.10.6-1 libdebconfclient0_0.201 libdevmapper1.02.1_2:1.02.114-1 libdpkg-perl_1.18.4 libdrm2_2.4.65-3 libexpat1_2.1.0-7 libexpat1-dev_2.1.0-7 libfakeroot_1.20.2-1 libfdisk1_2.27.1-1 libffi6_3.2.1-4 libfile-stripnondeterminism-perl_0.014-1 libfontconfig1_2.11.0-6.3 libfreetype6_2.6.1-0.1 libgc1c2_1:7.4.2-7.3 libgcc-4.9-dev_4.9.3-10 libgcc-5-dev_5.3.1-5+rpi1 libgcc1_1:5.3.1-5+rpi1 libgcrypt20_1.6.4-4 libgdbm3_1.8.3-13.1 libgfortran-5-dev_5.3.1-5+rpi1 libgfortran3_5.3.1-5+rpi1 libglib2.0-0_2.46.2-3 libgmp10_2:6.1.0+dfsg-2 libgomp1_5.3.1-5+rpi1 libgpg-error0_1.21-1 libicu55_55.1-7 libisl13_0.14-2 libisl15_0.15-3 libklibc_2.0.4-4+rpi1 libkmod2_21-1 liblapack3_3.5.0-5 liblzma5_5.1.1alpha+20120614-2.1 libmagic1_1:5.25-2 libmount1_2.27.1-1 libmpc3_1.0.3-1 libmpfr4_3.1.3-2 libncurses5_6.0+20151024-2 libncursesw5_6.0+20151024-2 libopenbabel4v5_2.3.2+dfsg-2.2+b1 libpam-modules_1.1.8-3.1 libpam-modules-bin_1.1.8-3.1 libpam-runtime_1.1.8-3.1 libpam0g_1.1.8-3.1 libpcre3_2:8.35-8 libperl5.22_5.22.1-3 libpipeline1_1.4.1-2 libpixman-1-0_0.33.4-1 libpng12-0_1.2.54-1 libprocps3_2:3.3.9-9 libprocps4_2:3.3.10-2 libprocps5_2:3.3.11-3 libpython-dev_2.7.11-1 libpython-stdlib_2.7.11-1 libpython2.7_2.7.11-2 libpython2.7-dev_2.7.11-2 libpython2.7-minimal_2.7.11-2 libpython2.7-stdlib_2.7.11-2 libreadline6_6.3-8+b3 libseccomp2_2.2.3-2 libselinux1_2.4-3 libsemanage-common_2.4-3 libsemanage1_2.4-3 libsepol1_2.4-2 libslang2_2.3.0-2+b1 libsmartcols1_2.27.1-1 libsqlite3-0_3.9.2-1 libss2_1.42.13-1 libssl1.0.2_1.0.2e-1 libstdc++-4.9-dev_4.9.3-10 libstdc++-5-dev_5.3.1-5+rpi1 libstdc++6_5.3.1-5+rpi1 libsystemd0_228-2 libtimedate-perl_2.3000-2 libtinfo5_6.0+20151024-2 libubsan0_5.3.1-5+rpi1 libudev1_228-2 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-27 libustr-1.0-1_1.0.4-5 libuuid1_2.27.1-1 libx11-6_2:1.6.3-1 libx11-data_2:1.6.3-1 libxau6_1:1.0.8-1 libxcb-render0_1.10-3+b1 libxcb-shm0_1.10-3+b1 libxcb1_1.10-3+b1 libxdmcp6_1:1.1.2-1 libxext6_2:1.3.3-1 libxml2_2.9.3+dfsg1-1 libxml2-utils_2.9.3+dfsg1-1 libxrender1_1:0.9.9-2 libxslt1.1_1.1.28-2.1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.1 lsb-base_4.1+Debian13+rpi1+nmu1 make_4.0-8.2 makedev_2.3.1-93 man-db_2.7.5-1 manpages_3.74-1 mawk_1.3.3-17 mime-support_3.59 mount_2.27.1-1 multiarch-support_2.21-6 nano_2.4.2-1 ncurses-base_6.0+20151024-2 ncurses-bin_6.0+20151024-2 openbabel_2.3.2+dfsg-2.2+b1 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.1-3 perl-base_5.22.1-3 perl-modules-5.22_5.22.1-3 po-debconf_1.0.18 procps_2:3.3.11-3 python_2.7.11-1 python-dev_2.7.11-1 python-minimal_2.7.11-1 python-numpy_1:1.9.2-5 python2.7_2.7.11-2 python2.7-dev_2.7.11-2 python2.7-minimal_2.7.11-2 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-pdb2pqr-dummy_0.invalid.0 scons_2.4.1-1 sed_4.2.2-6.1 sensible-utils_0.0.9 sgml-base_1.26+nmu4 sgml-data_2.0.10 startpar_0.59-3 swig_3.0.7-2 swig3.0_3.0.7-2 systemd_228-2 systemd-sysv_228-2 sysv-rc_2.88dsf-59.2 sysvinit-utils_2.88dsf-59.2 tar_1.28-2.1 tzdata_2015g-1 ucf_3.0031 udev_228-2 util-linux_2.27.1-1 xml-core_0.13+nmu2 xmlto_0.0.28-0.1 xsltproc_1.1.28-2.1 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
└──────────────────────────────────────────────────────────────────────────────┘
Unpack source
─────────────
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Fri Jan 8 10:11:34 2016 UTC using RSA key ID D1C646D1
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./pdb2pqr_2.1.0+dfsg-1.dsc
dpkg-source: info: extracting pdb2pqr in pdb2pqr-2.1.0+dfsg
dpkg-source: info: unpacking pdb2pqr_2.1.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking pdb2pqr_2.1.0+dfsg-1.debian.tar.xz
dpkg-source: info: applying fix-hashbangs.patch
dpkg-source: info: applying no_privacy_breach_logo.patch
dpkg-source: info: applying do_not_try_to_build_removed_js_target.patch
Check disc space
────────────────
Sufficient free space for build
User Environment
────────────────
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-a68b9ee3-753a-4630-82f6-acb26a5f5434
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package pdb2pqr
dpkg-buildpackage: source version 2.1.0+dfsg-1
dpkg-buildpackage: source distribution unstable
dpkg-source --before-build pdb2pqr-2.1.0+dfsg
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
dh clean --with python2
dh_testdir
debian/rules override_dh_auto_clean
make[1]: Entering directory '/«BUILDDIR»/pdb2pqr-2.1.0+dfsg'
( cd pdb2pka && \
if [ -e pMC_mult_wrap.cpp.saved ]; then mv pMC_mult_wrap.cpp.saved pMC_mult_wrap.cpp; fi && \
if [ -e pMC_mult.py.saved ]; then mv pMC_mult.py.saved pMC_mult.py; fi )
find . -name *.pyc -delete
find . -name *.so -delete
find . -name *.os -delete
rm -f *.cgi .sconsign.dblite .variables.cache pdb2pqr.py html/server.html src/aconf.py
dh_auto_clean
make[1]: Leaving directory '/«BUILDDIR»/pdb2pqr-2.1.0+dfsg'
dh_clean
debian/rules build-arch
dh build-arch --with python2
dh_testdir -a
debian/rules override_dh_auto_configure
make[1]: Entering directory '/«BUILDDIR»/pdb2pqr-2.1.0+dfsg'
dh_auto_configure
python scons/scons.py \
URL="http://localhost/pdb2pqr/" \
PREFIX="/usr/share/pdb2pqr"
scons: Reading SConscript files ...
not using opal
scons: done reading SConscript files.
scons: Building targets ...
CopySubAction("pdb2pqr.py", "pdb2pqr.py.in")
Chmod("pdb2pqr.py", 0755)
CopySubAction("apbs_cgi.cgi", "apbs_cgi.py")
Chmod("apbs_cgi.cgi", 0755)
CopySubAction("visualize.cgi", "visualize.py")
Chmod("visualize.cgi", 0755)
CopySubAction("querystatus.cgi", "querystatus.py")
Chmod("querystatus.cgi", 0755)
CopySubAction("src/aconf.py", "src/aconf.py.in")
CopySubAction("html/server.html", "html/server.html.in")
Copy("pdb2pqr.cgi", "pdb2pqr.py")
g++ -o pdb2pka/substruct/Algorithms.os -c -fPIC -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include pdb2pka/substruct/Algorithms.cpp
In file included from /usr/include/python2.7/numpy/ndarraytypes.h:1804:0,
from /usr/include/python2.7/numpy/ndarrayobject.h:17,
from /usr/include/python2.7/numpy/arrayobject.h:4,
from pdb2pka/substruct/Algorithms.cpp:43:
/usr/include/python2.7/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^
g++ -o pdb2pka/substruct/Algorithms.so -shared -Wl,-Bsymbolic -Wl,-soname=Algorithms.so pdb2pka/substruct/Algorithms.os -L/usr/lib -lpython2.7
g++ -o pdb2pka/pMC_mult.os -c -fPIC -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include pdb2pka/pMC_mult.cpp
g++ -o pdb2pka/pMC_mult_wrap.os -c -fPIC -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include pdb2pka/pMC_mult_wrap.cpp
g++ -o pdb2pka/_pMC_mult.so -shared -Wl,-Bsymbolic -Wl,-soname=_pMC_mult.so pdb2pka/pMC_mult.os pdb2pka/pMC_mult_wrap.os -L/usr/lib -lpython2.7
scons: done building targets.
TARGETS: ['pdb2pqr.py', 'apbs_cgi.cgi', 'visualize.cgi', 'querystatus.cgi', 'src/aconf.py', 'html/server.html', 'pdb2pqr.cgi', 'pdb2pka/substruct/Algorithms.so', 'pdb2pka/_pMC_mult.so']
========================
Configuration Parameters
========================
Version: 2.1.0
Install directory: /usr/share/pdb2pqr/
pdb2pka and ligand support: True
Path to the website directory: http://localhost/pdb2pqr/
PDB2PQR jobs run via the web interface will be forked on the server.
The preferred way to configure the build is by editing the file build_config.py
Run scons with the python that you intend to use with pdb2pqr.
For example: "/opt/bin/python scons/scons.py" will setup pdb2pqr to be run with /opt/bin/python
Run "python scons/scons.py install" to install pdb2pqr in /usr/share/pdb2pqr/
Run "python scons/scons.py basic-test" for a basic functionality test
Run "python scons/scons.py advanced-test" for a single test of ligand and PROPKA support. Requires numpy and PDB2PKA support compiled.
Run "python scons/scons.py complete-test" for a complete test of all functionality EXCEPT PDB2PKA. Requires numpy and PDB2PKA support compiled.
Run "python scons/scons.py pdb2pka-test" for a test of PDB2PKA functionality.
Requires numpy, PDB2PKA support compiled AND the APBS python libraries compiled and installed in the pdb2pka directory.
To setup a web service create a symbolic link to /usr/share/pdb2pqr/ that enables you to view http://localhost/pdb2pqr/ after running "scons/scons.py install"
Run "python scons/scons.py msvs" to build Visual Studio projects for the Algorithms and pMC_mult modules.
VS project generation is not well supported in scons. Resulting projects should build using NMAKE but cannot be used for debugging.
The resulting projects will need to modified to use VS natively to compile the code or debug.
Build succeeded.
( cd pdb2pka && \
cp -a pMC_mult_wrap.cpp pMC_mult_wrap.cpp.saved && \
cp -a pMC_mult.py pMC_mult.py.saved && \
swig -c++ -python -o pMC_mult_wrap.cpp pMC_mult.i )
make[1]: Leaving directory '/«BUILDDIR»/pdb2pqr-2.1.0+dfsg'
dh_auto_build -a
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch --with python2
dh_testroot -a
dh_prep -a
dh_installdirs -a
debian/rules override_dh_auto_install-arch
make[1]: Entering directory '/«BUILDDIR»/pdb2pqr-2.1.0+dfsg'
dh_auto_install -a
for app in /usr/share/pdb2pqr/pdb2pqr.py /usr/share/pdb2pqr/src/psize.py; do \
sed -e "s,@SCRIPT@,${app}," debian/wrapper.sh \
>debian/pdb2pqr/usr/bin/$(basename ${app} .py) && \
chmod 0755 debian/pdb2pqr/usr/bin/$(basename ${app} .py); \
done
for app in /usr/share/pdb2pqr/propka30/propka.py; do \
sed -e "s,@SCRIPT@,${app}," debian/wrapper.sh \
>debian/pdb2pqr/usr/bin/$(basename ${app} .py) && \
chmod 0755 debian/pdb2pqr/usr/bin/$(basename ${app} .py); \
done
make[1]: Leaving directory '/«BUILDDIR»/pdb2pqr-2.1.0+dfsg'
dh_install -a
dh_installdocs -a
debian/rules override_dh_installchangelogs
make[1]: Entering directory '/«BUILDDIR»/pdb2pqr-2.1.0+dfsg'
dh_installchangelogs ChangeLog.md
make[1]: Leaving directory '/«BUILDDIR»/pdb2pqr-2.1.0+dfsg'
debian/rules override_dh_installman-arch
make[1]: Entering directory '/«BUILDDIR»/pdb2pqr-2.1.0+dfsg'
dh_installman -a
xmlto -o debian/pdb2pqr/usr/share/man/man1/ man debian/pdb2pqr.1.xml
Note: Writing pdb2pqr.1
xmlto -o debian/pdb2pqr/usr/share/man/man1/ man debian/psize.1.xml
Note: Writing psize.1
xmlto -o debian/pdb2pqr/usr/share/man/man1/ man debian/propka.1.xml
Note: Writing propka.1
make[1]: Leaving directory '/«BUILDDIR»/pdb2pqr-2.1.0+dfsg'
dh_python2 -a
W: dh_python2:479: Please add dh-python package to Build-Depends
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
debian/rules override_dh_fixperms-arch
make[1]: Entering directory '/«BUILDDIR»/pdb2pqr-2.1.0+dfsg'
dh_fixperms -a
chmod 0644 debian/pdb2pqr/usr/share/pdb2pqr/main.py
chmod 0644 debian/pdb2pqr/usr/share/pdb2pqr/main_cgi.py
chmod 0644 debian/pdb2pqr/usr/share/pdb2pqr/pdb2pka/ligandclean/__init__.py
chmod 0644 debian/pdb2pqr/usr/share/pdb2pqr/pdb2pka/pka_routines.py
chmod 0644 debian/pdb2pqr/usr/share/pdb2pqr/pdb2pka/pKaIO_compat.py
chmod 0644 debian/pdb2pqr/usr/share/pdb2pqr/pdb2pka/pKa_utility_functions_compat.py
chmod 0644 debian/pdb2pqr/usr/share/pdb2pqr/src/errors.py
chmod 0755 debian/pdb2pqr/usr/share/pdb2pqr/propka30/propka.py
make[1]: Leaving directory '/«BUILDDIR»/pdb2pqr-2.1.0+dfsg'
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: debian/pdb2pqr/usr/lib/pdb2pqr/pdb2pka/substruct/Algorithms.so contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/pdb2pqr/usr/lib/pdb2pqr/pdb2pka/_pMC_mult.so contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'pdb2pqr-dbgsym' in '../pdb2pqr-dbgsym_2.1.0+dfsg-1_armhf.deb'.
dpkg-deb: building package 'pdb2pqr' in '../pdb2pqr_2.1.0+dfsg-1_armhf.deb'.
dpkg-genchanges -B -mRaspbian wandboard test autobuilder <root@raspbian.org> >../pdb2pqr_2.1.0+dfsg-1_armhf.changes
dpkg-genchanges: warning: package pdb2pqr-dbgsym listed in files list but not in control info
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build pdb2pqr-2.1.0+dfsg
dpkg-buildpackage: binary-only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20160114-1045
Finished
────────
I: Built successfully
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build Chroot │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes │
└──────────────────────────────────────────────────────────────────────────────┘
pdb2pqr_2.1.0+dfsg-1_armhf.changes:
───────────────────────────────────
Format: 1.8
Date: Fri, 08 Jan 2016 11:06:14 +0100
Source: pdb2pqr
Binary: pdb2pqr pdb2pqr-doc
Architecture: armhf
Version: 2.1.0+dfsg-1
Distribution: stretch-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
pdb2pqr - Preparation of protein structures for electrostatics calculations
pdb2pqr-doc - example files accompanying pdb2pqr
Changes:
pdb2pqr (2.1.0+dfsg-1) unstable; urgency=medium
.
* Moved to Git
* New upstream version
* Add lintian overrides for false positives source-is-missing
* Remove unused JS files via Files-Excluded
Checksums-Sha1:
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Checksums-Sha256:
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Files:
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499b887b856116832c68f2e9aa361f25 347890 science optional pdb2pqr_2.1.0+dfsg-1_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
pdb2pqr-dbgsym_2.1.0+dfsg-1_armhf.deb
─────────────────────────────────────
new debian package, version 2.0.
size 34854 bytes: control archive=549 bytes.
458 bytes, 13 lines control
212 bytes, 2 lines md5sums
Package: pdb2pqr-dbgsym
Source: pdb2pqr
Version: 2.1.0+dfsg-1
Architecture: armhf
Maintainer: Debian Med <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 263
Depends: pdb2pqr (= 2.1.0+dfsg-1)
Section: debug
Priority: extra
Homepage: http://pdb2pqr.poissonboltzmann.org/pdb2pqr/
Description: Debug symbols for pdb2pqr
Auto-Built-Package: debug-symbols
Build-Ids: 0297c7bdd58b4590e924e0d7a2f3b0f4ecb08a17 c9c5395b3b235b7309ba12a3db1a2ab169286a45
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drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/lib/debug/
drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/lib/debug/.build-id/
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drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/share/doc/
lrwxrwxrwx root/root 0 2016-01-14 10:44 ./usr/share/doc/pdb2pqr-dbgsym -> pdb2pqr
pdb2pqr_2.1.0+dfsg-1_armhf.deb
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new debian package, version 2.0.
size 347890 bytes: control archive=4797 bytes.
1357 bytes, 28 lines control
9112 bytes, 125 lines md5sums
182 bytes, 9 lines * postinst #!/bin/sh
251 bytes, 14 lines * prerm #!/bin/sh
Package: pdb2pqr
Version: 2.1.0+dfsg-1
Architecture: armhf
Maintainer: Debian Med <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 2643
Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.5), libpython2.7 (>= 2.7), libstdc++6 (>= 5.2), python:any (>= 2.6.6-7~), python2.7:any, python-numpy
Suggests: apbs
Enhances: autodocktools
Replaces: propka
Provides: propka
Section: science
Priority: optional
Homepage: http://pdb2pqr.poissonboltzmann.org/pdb2pqr/
Description: Preparation of protein structures for electrostatics calculations
PDB2PQR is a Python software package that automates many of the common
tasks of preparing structures for continuum electrostatics calculations.
It thus provides a platform-independent utility for converting protein files
in PDB format to PQR format. These tasks include:
* Adding a limited number of missing heavy atoms to biomolecular structures
* Determining side-chain pKas
* Placing missing hydrogens
* Optimizing the protein for favorable hydrogen bonding
* Assigning charge and radius parameters from a variety of force fields
.
This package also includes PropKa, a tool to modify the protonation state of
protein structures in the Protein Data Bank (PDB) format to match a given pKa
value. It can also be used to refine NMR structures, which often yield
inaccurate pKa values for some residues.
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drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/bin/
-rwxr-xr-x root/root 124 2016-01-14 10:44 ./usr/bin/pdb2pqr
-rwxr-xr-x root/root 132 2016-01-14 10:44 ./usr/bin/propka
-rwxr-xr-x root/root 126 2016-01-14 10:44 ./usr/bin/psize
drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/lib/
drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/lib/pdb2pqr/
drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/lib/pdb2pqr/pdb2pka/
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drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/lib/pdb2pqr/pdb2pka/substruct/
-rw-r--r-- root/root 12500 2016-01-14 10:44 ./usr/lib/pdb2pqr/pdb2pka/substruct/Algorithms.so
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drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/share/doc/pdb2pqr/
-rw-r--r-- root/root 30 2015-12-03 18:59 ./usr/share/doc/pdb2pqr/AUTHORS
-rw-r--r-- root/root 172 2015-12-03 18:59 ./usr/share/doc/pdb2pqr/NEWS.gz
-rw-r--r-- root/root 489 2016-01-08 10:06 ./usr/share/doc/pdb2pqr/README.Debian
-rw-r--r-- root/root 359 2015-12-03 18:59 ./usr/share/doc/pdb2pqr/README.md
-rw-r--r-- root/root 1289 2016-01-08 10:06 ./usr/share/doc/pdb2pqr/changelog.Debian.gz
-rw-r--r-- root/root 897 2015-12-03 18:59 ./usr/share/doc/pdb2pqr/changelog.gz
-rw-r--r-- root/root 5201 2016-01-08 10:06 ./usr/share/doc/pdb2pqr/copyright
drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/share/man/
drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/share/man/man1/
-rw-r--r-- root/root 2083 2016-01-14 10:44 ./usr/share/man/man1/pdb2pqr.1.gz
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-rw-r--r-- root/root 1252 2016-01-14 10:44 ./usr/share/man/man1/psize.1.gz
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drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/share/pdb2pqr/dat/
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-rw-r--r-- root/root 60679 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/AMBER.DAT
-rw-r--r-- root/root 2290 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/AMBER.names
-rw-r--r-- root/root 64231 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/CHARMM.DAT
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-rw-r--r-- root/root 4484 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/HYDROGENS.xml
-rw-r--r-- root/root 33840 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/NA.xml
-rw-r--r-- root/root 24406 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/PARSE.DAT
-rw-r--r-- root/root 5692 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/PARSE.names
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-rw-r--r-- root/root 29525 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/PEOEPB.DAT
-rw-r--r-- root/root 1672 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/PEOEPB.names
-rw-r--r-- root/root 34200 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/SWANSON.DAT
-rw-r--r-- root/root 1185 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/SWANSON.names
-rw-r--r-- root/root 62119 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/TOPOLOGY.xml
-rw-r--r-- root/root 97563 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/TYL06.DAT
-rw-r--r-- root/root 1993 2015-12-03 18:59 ./usr/share/pdb2pqr/dat/TYL06.names
drwxr-xr-x root/root 0 2016-01-14 10:44 ./usr/share/pdb2pqr/extensions/
-rw-r--r-- root/root 206 2015-12-03 18:59 ./usr/share/pdb2pqr/extensions/README
-rw-r--r-- root/root 4628 2015-12-03 18:59 ./usr/share/pdb2pqr/extensions/__init__.py
-rw-r--r-- root/root 1941 2015-12-03 18:59 ./usr/share/pdb2pqr/extensions/chi.py
-rw-r--r-- root/root 2843 2015-12-03 18:59 ./usr/share/pdb2pqr/extensions/contact.py
-rw-r--r-- root/root 6986 2015-12-03 18:59 ./usr/share/pdb2pqr/extensions/hbond.py
-rw-r--r-- root/root 13567 2015-12-03 18:59 ./usr/share/pdb2pqr/extensions/newresinter.py
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-rw-r--r-- root/root 27764 2015-12-03 18:59 ./usr/share/pdb2pqr/main_cgi.py
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-rw-r--r-- root/root 28386 2015-12-03 18:59 ./usr/share/pdb2pqr/pdb2pka/NEWligand_topology.py
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-rw-r--r-- root/root 14696 2015-12-03 18:59 ./usr/share/pdb2pqr/pdb2pka/apbs.py
-rw-r--r-- root/root 3425 2015-12-03 18:59 ./usr/share/pdb2pqr/pdb2pka/charge_mon.py
-rw-r--r-- root/root 7906 2015-12-03 18:59 ./usr/share/pdb2pqr/pdb2pka/example.py
-rw-r--r-- root/root 11384 2016-01-14 10:43 ./usr/share/pdb2pqr/pdb2pka/inputgen_pKa.py
-rw-r--r-- root/root 28394 2015-12-03 18:59 ./usr/share/pdb2pqr/pdb2pka/ligand_topology.py
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Purging /«BUILDDIR»
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Build Architecture: armhf
Build-Space: 50296
Build-Time: 106
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 503
Job: pdb2pqr_2.1.0+dfsg-1
Machine Architecture: armhf
Package: pdb2pqr
Package-Time: 656
Source-Version: 2.1.0+dfsg-1
Space: 50296
Status: successful
Version: 2.1.0+dfsg-1
────────────────────────────────────────────────────────────────────────────────
Finished at 20160114-1045
Build needed 00:10:56, 50296k disc space