openms →
2.5.0+cleaned1-5 →
armhf → 2021-01-27 17:11:34
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd
+==============================================================================+
| openms 2.5.0+cleaned1-5 (armhf) Wed, 27 Jan 2021 16:14:45 +0000 |
+==============================================================================+
Package: openms
Version: 2.5.0+cleaned1-5
Source Version: 2.5.0+cleaned1-5
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-6a5d87a8-b6be-48ae-9cd8-1622c340f968' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf Packages [13.1 MB]
Fetched 13.1 MB in 18s (751 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'openms' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/debichem-team/openms.git
Please use:
git clone https://salsa.debian.org/debichem-team/openms.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 206 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main openms 2.5.0+cleaned1-5 (dsc) [3020 B]
Get:2 http://172.17.0.1/private bullseye-staging/main openms 2.5.0+cleaned1-5 (tar) [206 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main openms 2.5.0+cleaned1-5 (diff) [17.0 kB]
Fetched 206 MB in 1min 7s (3084 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/openms-uJZ1JW/openms-2.5.0+cleaned1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/openms-uJZ1JW' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-ucrHsi/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-ucrHsi/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-ucrHsi/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-ucrHsi/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-ucrHsi/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-ucrHsi/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-ucrHsi/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-ucrHsi/apt_archive ./ Packages [430 B]
Fetched 2106 B in 1s (2854 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils krb5-locales libnss-nis libnss-nisplus netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-ucrHsi/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (22.8 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12526 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 12), dh-exec (>= 0.3), dpkg-dev (>= 1.19.7), cmake (>= 3.1.2), libxerces-c-dev (>= 3.2.2), libeigen3-dev, libwildmagic-dev (>= 5.17), libboost-dev (>= 1.67.0), libboost-iostreams-dev (>= 1.67.0), libboost-date-time-dev (>= 1.67.0), libboost-math-dev (>= 1.67.0), libsqlite3-dev, seqan-dev (>= 1.4.2), libsvm-dev (>= 3.21), libglpk-dev (>= 4.65), zlib1g-dev (>= 1.2.7), libbz2-dev (>= 1.0.6), cppcheck (>= 1.54), qtbase5-dev (>= 5.11.3), libqt5opengl5-dev (>= 5.11.3), libqt5svg5-dev (>= 5.11.3), coinor-libcbc-dev (>= 2.9.9), coinor-libcgl-dev (>= 0.59.10), libhdf5-dev, imagemagick, doxygen (>= 1.8.13), graphviz, texlive-extra-utils, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-extra, texlive-font-utils, texlive-plain-generic, tex-gyre, ghostscript, texlive-fonts-recommended
Filtered Build-Depends: debhelper-compat (= 12), dh-exec (>= 0.3), dpkg-dev (>= 1.19.7), cmake (>= 3.1.2), libxerces-c-dev (>= 3.2.2), libeigen3-dev, libwildmagic-dev (>= 5.17), libboost-dev (>= 1.67.0), libboost-iostreams-dev (>= 1.67.0), libboost-date-time-dev (>= 1.67.0), libboost-math-dev (>= 1.67.0), libsqlite3-dev, seqan-dev (>= 1.4.2), libsvm-dev (>= 3.21), libglpk-dev (>= 4.65), zlib1g-dev (>= 1.2.7), libbz2-dev (>= 1.0.6), cppcheck (>= 1.54), qtbase5-dev (>= 5.11.3), libqt5opengl5-dev (>= 5.11.3), libqt5svg5-dev (>= 5.11.3), coinor-libcbc-dev (>= 2.9.9), coinor-libcgl-dev (>= 0.59.10), libhdf5-dev, imagemagick, doxygen (>= 1.8.13), graphviz, texlive-extra-utils, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-extra, texlive-font-utils, texlive-plain-generic, tex-gyre, ghostscript, texlive-fonts-recommended
dpkg-deb: building package 'sbuild-build-depends-openms-dummy' in '/<<BUILDDIR>>/resolver-ucrHsi/apt_archive/sbuild-build-depends-openms-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-openms-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-ucrHsi/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-ucrHsi/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-ucrHsi/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-ucrHsi/apt_archive ./ Sources [804 B]
Get:5 copy:/<<BUILDDIR>>/resolver-ucrHsi/apt_archive ./ Packages [882 B]
Fetched 3019 B in 1s (4125 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install openms build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libnss-nis libnss-nisplus netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev cmake cmake-data coinor-libcbc-dev
coinor-libcbc3 coinor-libcgl-dev coinor-libcgl1 coinor-libclp-dev
coinor-libclp1 coinor-libcoinutils-dev coinor-libcoinutils3v5
coinor-libosi-dev coinor-libosi1v5 cppcheck debhelper dh-autoreconf dh-exec
dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config
fonts-dejavu-core fonts-lmodern fonts-urw-base35 gettext gettext-base
ghostscript graphviz groff-base hdf5-helpers hicolor-icon-theme icu-devtools
imagemagick imagemagick-6-common imagemagick-6.q16 intltool-debian
libaec-dev libaec0 libamd2 libaom0 libapache-pom-java libarchive-zip-perl
libarchive13 libavahi-client3 libavahi-common-data libavahi-common3
libblas-dev libblas3 libboost-date-time-dev libboost-date-time1.74-dev
libboost-date-time1.74.0 libboost-dev libboost-iostreams-dev
libboost-iostreams1.74-dev libboost-iostreams1.74.0 libboost-math-dev
libboost-math1.74-dev libboost-math1.74.0 libboost-regex1.74-dev
libboost-regex1.74.0 libboost-serialization1.74-dev
libboost-serialization1.74.0 libboost1.74-dev libbrotli1 libbsd0 libbtf1
libbz2-dev libcairo2 libcamd2 libccolamd2 libcdt5 libcgraph6 libcholmod3
libclang-cpp11 libclang1-11 libcolamd2 libcommons-logging-java
libcommons-parent-java libcups2 libcurl3-gnutls libcurl4 libcxsparse3
libdatrie1 libdav1d4 libdbus-1-3 libde265-0 libdebhelper-perl libdeflate0
libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-nouveau2
libdrm-radeon1 libdrm2 libedit2 libegl-dev libegl-mesa0 libegl1
libeigen3-dev libelf1 libevdev2 libexpat1 libfftw3-double3
libfile-stripnondeterminism-perl libfontbox-java libfontconfig1 libfontenc1
libfreetype6 libfribidi0 libgbm1 libgd3 libgfortran5 libgl-dev libgl1
libgl1-mesa-dri libglapi-mesa libgles-dev libgles1 libgles2 libglib2.0-0
libglpk-dev libglpk40 libglvnd0 libglx-dev libglx-mesa0 libglx0 libgmp-dev
libgmpxx4ldbl libgraphblas3 libgraphite2-3 libgs9 libgs9-common libgts-0.7-5
libgudev-1.0-0 libgvc6 libgvpr2 libharfbuzz0b libhdf5-103-1
libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100
libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libheif1 libice6 libicu-dev
libicu67 libidn11 libijs-0.35 libinput-bin libinput10 libjbig0 libjbig2dec0
libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjsoncpp24
libklu1 libkpathsea6 liblab-gamut1 liblapack-dev liblapack3 liblcms2-2
libldl2 libllvm11 liblqr-1-0 libltdl7 libmagic-mgc libmagic1
libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmd4c0 libmetis5
libmime-charset-perl libmongoose2 libmtdev1 libncurses6 libnghttp2-14
libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
libpaper-utils libpaper1 libpathplan4 libpcre2-16-0 libpdfbox-java
libpipeline1 libpixman-1-0 libpng16-16 libprocps8 libpsl5 libptexenc1
libpthread-stubs0-dev libpython3-stdlib libpython3.9-minimal
libpython3.9-stdlib libqt5concurrent5 libqt5core5a libqt5dbus5 libqt5gui5
libqt5network5 libqt5opengl5 libqt5opengl5-dev libqt5printsupport5
libqt5sql5 libqt5svg5 libqt5svg5-dev libqt5test5 libqt5widgets5 libqt5xml5
librbio2 librhash0 librtmp1 libsensors-config libsensors5 libsigsegv2
libsliplu1 libsm6 libsombok3 libspqr2 libsqlite3-dev libssh2-1
libsub-override-perl libsuitesparse-dev libsuitesparseconfig5 libsvm-dev
libsvm3 libsynctex2 libsz2 libteckit0 libtexlua53 libtexluajit2 libthai-data
libthai0 libtiff5 libtinyxml2-8 libtool libuchardet0 libumfpack5
libunicode-linebreak-perl libuv1 libvulkan-dev libvulkan1 libwacom-common
libwacom2 libwayland-client0 libwayland-server0 libwebp6 libwebpdemux2
libwebpmux3 libwildmagic-common libwildmagic-dev libwildmagic5 libx11-6
libx11-data libx11-dev libx11-xcb1 libx265-192 libxapian30 libxau-dev
libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4
libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0
libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1
libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1
libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxerces-c-dev
libxerces-c3.2 libxext-dev libxext6 libxfixes3 libxi6 libxkbcommon-x11-0
libxkbcommon0 libxml2 libxmu6 libxpm4 libxrender1 libxshmfence1 libxt6
libxxf86vm1 libz3-4 libzzip-0-13 lmodern m4 mailcap man-db media-types
mime-support pkg-config po-debconf poppler-data preview-latex-style procps
python3 python3-minimal python3-pkg-resources python3-pygments python3.9
python3.9-minimal qt5-qmake qt5-qmake-bin qtbase5-dev qtbase5-dev-tools
qtchooser seqan-dev shared-mime-info t1utils tex-common tex-gyre
texlive-base texlive-binaries texlive-extra-utils texlive-font-utils
texlive-fonts-extra texlive-fonts-recommended texlive-latex-base
texlive-latex-extra texlive-latex-recommended texlive-luatex
texlive-pictures texlive-plain-generic ucf x11-common x11proto-core-dev
x11proto-dev x11proto-xext-dev xdg-utils xfonts-encodings xfonts-utils
xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cmake-doc ninja-build
cppcheck-gui clang clang-tidy dh-make doxygen-latex doxygen-doc doxygen-gui
fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre gettext-doc
libasprintf-dev libgettextpo-dev ghostscript-x gsfonts graphviz-doc groff
imagemagick-doc autotrace cups-bsd | lpr | lprng curl enscript ffmpeg gimp
gnuplot grads hp2xx html2ps libwmf-bin mplayer povray radiance sane-utils
transfig ufraw-batch lrzip liblapack-doc libboost-doc libboost1.74-doc
libboost-atomic1.74-dev libboost-chrono1.74-dev libboost-container1.74-dev
libboost-context1.74-dev libboost-contract1.74-dev
libboost-coroutine1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev
libboost-filesystem1.74-dev libboost-graph1.74-dev
libboost-graph-parallel1.74-dev libboost-locale1.74-dev libboost-log1.74-dev
libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev
libboost-program-options1.74-dev libboost-python1.74-dev
libboost-random1.74-dev libboost-stacktrace1.74-dev libboost-system1.74-dev
libboost-test1.74-dev libboost-thread1.74-dev libboost-timer1.74-dev
libboost-type-erasure1.74-dev libboost-wave1.74-dev libboost1.74-tools-dev
libmpfrc++-dev libntl-dev libboost-nowide1.74-dev libavalon-framework-java
libcommons-logging-java-doc libexcalibur-logkit-java liblog4j1.2-java
cups-common libeigen3-doc libfftw3-bin libfftw3-dev libgd-tools
libiodbc2-dev default-libmysqlclient-dev gmp-doc libgmp10-doc libmpfr-dev
libhdf5-doc icu-doc liblcms2-utils libmagickcore-6.q16-6-extra
libencode-hanextra-perl libpod2-base-perl qt5-image-formats-plugins
qtwayland5 lm-sensors sqlite3-doc libtool-doc gfortran | fortran95-compiler
gcj-jdk libx11-doc xapian-tools libxcb-doc libxerces-c-doc libxext-doc
m4-doc apparmor less www-browser libmail-box-perl poppler-utils
fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic
| fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum
python3-doc python3-tk python3-venv python3-setuptools python-pygments-doc
ttf-bitstream-vera python3.9-venv python3.9-doc binfmt-support firebird-dev
libpq-dev unixodbc-dev perl-tk xpdf | pdf-viewer xzdec chktex
default-jre-headless dvidvi dvipng fragmaster lacheck latexdiff latexmk
purifyeps xindy lcdf-typetools psutils cm-super texlive-fonts-extra-doc
texlive-fonts-recommended-doc texlive-latex-base-doc icc-profiles
libfile-which-perl libspreadsheet-parseexcel-perl texlive-latex-extra-doc
texlive-latex-recommended-doc texlive-pstricks dot2tex prerex ruby-tcltk
| libtcltk-ruby texlive-pictures-doc vprerex
Recommended packages:
curl | wget | lynx fonts-liberation libmagickcore-6.q16-6-extra netpbm
bzip2-doc ca-certificates dbus libarchive-cpio-perl libglib2.0-data
xdg-user-dirs fonts-droid-fallback libgts-bin javascript-common gsfonts
libgpm2 publicsuffix qttranslations5-l10n qt5-gtk-platformtheme
libqt5sql5-sqlite | libqt5sql5-mysql | libqt5sql5-odbc | libqt5sql5-psql
| libqt5sql5-tds | libqt5sql5-ibase libltdl-dev mesa-vulkan-drivers
| vulkan-icd libwacom-bin libmail-sendmail-perl psmisc fonts-texgyre dvisvgm
libfile-homedir-perl liblog-log4perl-perl libyaml-tiny-perl ruby
| ruby-interpreter ps2eps fonts-adf-accanthis fonts-adf-berenis
fonts-adf-gillius fonts-adf-universalis fonts-cabin fonts-cantarell
fonts-comfortaa fonts-croscore fonts-crosextra-caladea
fonts-crosextra-carlito fonts-dejavu-extra fonts-ebgaramond
fonts-ebgaramond-extra fonts-font-awesome fonts-freefont-otf
fonts-freefont-ttf fonts-gfs-artemisia fonts-gfs-complutum fonts-gfs-didot
fonts-gfs-neohellenic fonts-gfs-olga fonts-gfs-solomos fonts-go
fonts-junicode fonts-lato fonts-linuxlibertine fonts-lobstertwo
fonts-noto-color-emoji fonts-noto-core fonts-noto-mono fonts-oflb-asana-math
fonts-open-sans fonts-roboto-unhinted fonts-sil-charis fonts-sil-gentium
fonts-sil-gentium-basic fonts-sil-gentiumplus fonts-sil-gentiumplus-compact
fonts-stix texlive-fonts-extra-links tipa tk libfile-mimeinfo-perl
libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev cmake cmake-data coinor-libcbc-dev
coinor-libcbc3 coinor-libcgl-dev coinor-libcgl1 coinor-libclp-dev
coinor-libclp1 coinor-libcoinutils-dev coinor-libcoinutils3v5
coinor-libosi-dev coinor-libosi1v5 cppcheck debhelper dh-autoreconf dh-exec
dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config
fonts-dejavu-core fonts-lmodern fonts-urw-base35 gettext gettext-base
ghostscript graphviz groff-base hdf5-helpers hicolor-icon-theme icu-devtools
imagemagick imagemagick-6-common imagemagick-6.q16 intltool-debian
libaec-dev libaec0 libamd2 libaom0 libapache-pom-java libarchive-zip-perl
libarchive13 libavahi-client3 libavahi-common-data libavahi-common3
libblas-dev libblas3 libboost-date-time-dev libboost-date-time1.74-dev
libboost-date-time1.74.0 libboost-dev libboost-iostreams-dev
libboost-iostreams1.74-dev libboost-iostreams1.74.0 libboost-math-dev
libboost-math1.74-dev libboost-math1.74.0 libboost-regex1.74-dev
libboost-regex1.74.0 libboost-serialization1.74-dev
libboost-serialization1.74.0 libboost1.74-dev libbrotli1 libbsd0 libbtf1
libbz2-dev libcairo2 libcamd2 libccolamd2 libcdt5 libcgraph6 libcholmod3
libclang-cpp11 libclang1-11 libcolamd2 libcommons-logging-java
libcommons-parent-java libcups2 libcurl3-gnutls libcurl4 libcxsparse3
libdatrie1 libdav1d4 libdbus-1-3 libde265-0 libdebhelper-perl libdeflate0
libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-nouveau2
libdrm-radeon1 libdrm2 libedit2 libegl-dev libegl-mesa0 libegl1
libeigen3-dev libelf1 libevdev2 libexpat1 libfftw3-double3
libfile-stripnondeterminism-perl libfontbox-java libfontconfig1 libfontenc1
libfreetype6 libfribidi0 libgbm1 libgd3 libgfortran5 libgl-dev libgl1
libgl1-mesa-dri libglapi-mesa libgles-dev libgles1 libgles2 libglib2.0-0
libglpk-dev libglpk40 libglvnd0 libglx-dev libglx-mesa0 libglx0 libgmp-dev
libgmpxx4ldbl libgraphblas3 libgraphite2-3 libgs9 libgs9-common libgts-0.7-5
libgudev-1.0-0 libgvc6 libgvpr2 libharfbuzz0b libhdf5-103-1
libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100
libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libheif1 libice6 libicu-dev
libicu67 libidn11 libijs-0.35 libinput-bin libinput10 libjbig0 libjbig2dec0
libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjsoncpp24
libklu1 libkpathsea6 liblab-gamut1 liblapack-dev liblapack3 liblcms2-2
libldl2 libllvm11 liblqr-1-0 libltdl7 libmagic-mgc libmagic1
libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmd4c0 libmetis5
libmime-charset-perl libmongoose2 libmtdev1 libncurses6 libnghttp2-14
libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
libpaper-utils libpaper1 libpathplan4 libpcre2-16-0 libpdfbox-java
libpipeline1 libpixman-1-0 libpng16-16 libprocps8 libpsl5 libptexenc1
libpthread-stubs0-dev libpython3-stdlib libpython3.9-minimal
libpython3.9-stdlib libqt5concurrent5 libqt5core5a libqt5dbus5 libqt5gui5
libqt5network5 libqt5opengl5 libqt5opengl5-dev libqt5printsupport5
libqt5sql5 libqt5svg5 libqt5svg5-dev libqt5test5 libqt5widgets5 libqt5xml5
librbio2 librhash0 librtmp1 libsensors-config libsensors5 libsigsegv2
libsliplu1 libsm6 libsombok3 libspqr2 libsqlite3-dev libssh2-1
libsub-override-perl libsuitesparse-dev libsuitesparseconfig5 libsvm-dev
libsvm3 libsynctex2 libsz2 libteckit0 libtexlua53 libtexluajit2 libthai-data
libthai0 libtiff5 libtinyxml2-8 libtool libuchardet0 libumfpack5
libunicode-linebreak-perl libuv1 libvulkan-dev libvulkan1 libwacom-common
libwacom2 libwayland-client0 libwayland-server0 libwebp6 libwebpdemux2
libwebpmux3 libwildmagic-common libwildmagic-dev libwildmagic5 libx11-6
libx11-data libx11-dev libx11-xcb1 libx265-192 libxapian30 libxau-dev
libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4
libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0
libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1
libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1
libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxerces-c-dev
libxerces-c3.2 libxext-dev libxext6 libxfixes3 libxi6 libxkbcommon-x11-0
libxkbcommon0 libxml2 libxmu6 libxpm4 libxrender1 libxshmfence1 libxt6
libxxf86vm1 libz3-4 libzzip-0-13 lmodern m4 mailcap man-db media-types
mime-support pkg-config po-debconf poppler-data preview-latex-style procps
python3 python3-minimal python3-pkg-resources python3-pygments python3.9
python3.9-minimal qt5-qmake qt5-qmake-bin qtbase5-dev qtbase5-dev-tools
qtchooser sbuild-build-depends-openms-dummy seqan-dev shared-mime-info
t1utils tex-common tex-gyre texlive-base texlive-binaries
texlive-extra-utils texlive-font-utils texlive-fonts-extra
texlive-fonts-recommended texlive-latex-base texlive-latex-extra
texlive-latex-recommended texlive-luatex texlive-pictures
texlive-plain-generic ucf x11-common x11proto-core-dev x11proto-dev
x11proto-xext-dev xdg-utils xfonts-encodings xfonts-utils xkb-data
xorg-sgml-doctools xtrans-dev zlib1g-dev
0 upgraded, 362 newly installed, 0 to remove and 0 not upgraded.
Need to get 890 MB of archives.
After this operation, 2986 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-ucrHsi/apt_archive ./ sbuild-build-depends-openms-dummy 0.invalid.0 [1168 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-double3 armhf 3.3.8-2 [429 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.10-1 [73.3 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.9-2+b1 [261 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-3 [276 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.4+dfsg-1 [353 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf fonts-urw-base35 all 20200910-1 [6367 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-4.2 [281 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-4.2 [328 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libaom0 armhf 1.0.0.errata1-3 [793 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libdav1d4 armhf 0.7.1-3+rpi1 [207 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libde265-0 armhf 1.0.8-1+rpi1 [182 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libx265-192 armhf 3.4-2 [560 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libheif1 armhf 1.10.0-2 [161 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:2.0.5-2 [120 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf liblcms2-2 armhf 2.12~rc1-2 [121 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.4-1 [1182 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf liblqr-1-0 armhf 0.4.2-2.1 [23.1 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libltdl7 armhf 2.4.6-15 [388 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libopenjp2-7 armhf 2.3.1-1 [140 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libdeflate0 armhf 1.7-1 [44.0 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.2.0-1 [268 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libwebpdemux2 armhf 0.6.1-2 [86.7 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libwebpmux3 armhf 0.6.1-2 [94.2 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2.1 [136 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.7.0-2 [310 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.7.0-2 [706 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1.1 [47.8 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-6 [8289 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.3 [580 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf imagemagick-6-common all 8:6.9.11.24+dfsg-1 [208 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libmagickcore-6.q16-6 armhf 8:6.9.11.24+dfsg-1+b2 [1631 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libmagickwand-6.q16-6 armhf 8:6.9.11.24+dfsg-1+b2 [430 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf shared-mime-info armhf 2.0-1 [697 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libdouble-conversion3 armhf 3.1.5-6.1 [38.6 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.36-2 [197 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libqt5core5a armhf 5.15.2+dfsg-2+rpi1 [1515 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-4.2 [416 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libdrm-common all 2.4.103-2+rpi1 [14.9 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libdrm2 armhf 2.4.103-2+rpi1 [37.7 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libglvnd0 armhf 1.3.2-1 [55.2 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libwayland-server0 armhf 1.18.0-2~exp1.1 [28.0 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libgbm1 armhf 20.3.3-1+rpi1 [70.2 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf libglapi-mesa armhf 20.3.3-1+rpi1 [80.4 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf libwayland-client0 armhf 1.18.0-2~exp1.1 [22.1 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libx11-xcb1 armhf 2:1.7.0-2 [203 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri2-0 armhf 1.14-2.1 [103 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri3-0 armhf 1.14-2.1 [102 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libxcb-present0 armhf 1.14-2.1 [101 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libxcb-sync1 armhf 1.14-2.1 [104 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libxcb-xfixes0 armhf 1.14-2.1 [105 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libegl-mesa0 armhf 20.3.3-1+rpi1 [122 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libegl1 armhf 1.3.2-1 [28.8 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libgles2 armhf 1.3.2-1 [20.2 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.7.4-1 [1422 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+21 [252 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.10-1 [51.7 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libevdev2 armhf 1.10.1+dfsg-1+rpi1 [28.1 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libmtdev1 armhf 1.1.6-1 [22.0 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libgudev-1.0-0 armhf 234-1 [12.7 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libwacom-common all 1.7-1 [48.6 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libwacom2 armhf 1.7-1 [18.9 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libinput-bin armhf 1.16.4-3 [21.9 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libinput10 armhf 1.16.4-3 [100 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libmd4c0 armhf 0.4.7-1 [38.9 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libdbus-1-3 armhf 1.12.20-1+b3 [192 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libqt5dbus5 armhf 5.15.2+dfsg-2+rpi1 [212 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libqt5network5 armhf 5.15.2+dfsg-2+rpi1 [594 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libxcb-icccm4 armhf 0.4.1-1.1 [26.3 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.14-2.1 [101 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libxcb-util1 armhf 0.4.0-1 [22.1 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libxcb-image0 armhf 0.4.0-1+b3 [23.4 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libxcb-keysyms1 armhf 0.4.0-1+b2 [15.9 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libxcb-randr0 armhf 1.14-2.1 [111 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.14-2.1 [110 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render-util0 armhf 0.3.9-1+b1 [17.3 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shape0 armhf 1.14-2.1 [102 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libxcb-xinerama0 armhf 1.14-2.1 [101 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libxcb-xinput0 armhf 1.14-2.1 [123 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libxcb-xkb1 armhf 1.14-2.1 [122 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf xkb-data all 2.29-2 [655 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libxkbcommon0 armhf 1.0.3-2 [88.5 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libxkbcommon-x11-0 armhf 1.0.3-2 [15.1 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libqt5gui5 armhf 5.15.2+dfsg-2+rpi1 [2545 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libqt5widgets5 armhf 5.15.2+dfsg-2+rpi1 [2060 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libqt5svg5 armhf 5.15.2-2 [116 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libqt5svg5-dev armhf 5.15.2-2 [15.6 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf poppler-data all 0.4.10-1 [1602 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-minimal armhf 3.9.1-2+rpi1 [790 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf python3.9-minimal armhf 3.9.1-2+rpi1 [1623 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.9.1-1 [37.8 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf media-types all 4.0.0 [30.3 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf mailcap all 3.68 [31.6 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.66 [10.9 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-stdlib armhf 3.9.1-2+rpi1 [1658 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf python3.9 armhf 3.9.1-2+rpi1 [464 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.9.1-1 [21.0 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.9.1-1 [64.1 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf tex-common all 6.15 [53.5 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2+20201114-2 [79.9 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libprocps8 armhf 2:3.3.16-5 [59.8 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf procps armhf 2:3.3.16-5 [238 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.21-3 [170 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-3 [32.4 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-14 [313 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.3-2 [814 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.21-3 [509 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf cmake-data all 3.18.4-1+rpi1 [1725 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libarchive13 armhf 3.4.3-2 [294 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.42.0-1 [66.7 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1.1 [54.2 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.9.0-2 [141 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.74.0-1 [305 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf libjsoncpp24 armhf 1.9.4-4 [67.0 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf librhash0 armhf 1.4.1-1 [140 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libuv1 armhf 1.40.0-1 [118 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf cmake armhf 3.18.4-1+rpi1+b1 [3111 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-3 [108 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.2.1-6+rpi1 [232 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-3 [1597 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf coinor-libcoinutils3v5 armhf 2.11.4+repack1-1 [385 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf coinor-libosi1v5 armhf 0.108.6+repack1-1 [242 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf coinor-libclp1 armhf 1.17.5+repack1-1 [752 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf coinor-libcgl1 armhf 0.60.3+repack1-2 [337 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf coinor-libcbc3 armhf 2.10.5+ds1-3 [591 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf libblas-dev armhf 3.9.0-3 [113 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.9.0-3 [2980 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-4 [28.0 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf coinor-libcoinutils-dev armhf 2.11.4+repack1-1 [709 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf coinor-libosi-dev armhf 0.108.6+repack1-1 [305 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf coinor-libclp-dev armhf 1.17.5+repack1-1 [940 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf coinor-libcgl-dev armhf 0.60.3+repack1-2 [458 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf coinor-libcbc-dev armhf 2.10.5+ds1-3 [756 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf libtinyxml2-8 armhf 8.0.0+dfsg-2 [24.9 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf libz3-4 armhf 4.8.9-1 [5548 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 51.3.3-1 [189 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf python3-pygments all 2.7.1+dfsg-1 [656 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf cppcheck armhf 2.3-1 [1414 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-15 [513 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.3.1 [188 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.10.0-1 [25.6 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.10.0-1 [15.3 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.182-3 [162 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13+20210118-1 [163 kB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.21-3 [1214 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.3.1 [1010 kB]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf dh-exec armhf 0.23.2+b3 [25.7 kB]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf libedit2 armhf 3.1-20191231-2 [80.2 kB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf libllvm11 armhf 1:11.0.1-2+rpi1 [15.6 MB]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf libclang-cpp11 armhf 1:11.0.1-2+rpi1 [8275 kB]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf libclang1-11 armhf 1:11.0.1-2+rpi1 [4646 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf libxapian30 armhf 1.4.18-1 [969 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf doxygen armhf 1.9.1-1 [3482 kB]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf fonts-lmodern all 2.004.5-6.1 [4540 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf libgs9-common all 9.53.3~dfsg-6 [733 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common-data armhf 0.8-3+b2 [127 kB]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common3 armhf 0.8-3+b2 [55.3 kB]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf libavahi-client3 armhf 0.8-3+b2 [58.0 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf libcups2 armhf 2.3.3op1-7 [311 kB]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf libidn11 armhf 1.33-3 [113 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf libijs-0.35 armhf 0.35-15 [14.7 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf libjbig2dec0 armhf 0.19-1 [58.1 kB]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf libgs9 armhf 9.53.3~dfsg-6 [1870 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf ghostscript armhf 9.53.3~dfsg-6 [97.3 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf libcdt5 armhf 2.42.2-4+b2 [59.8 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf libcgraph6 armhf 2.42.2-4+b2 [78.8 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf libxpm4 armhf 1:3.5.12-1 [43.6 kB]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf libgd3 armhf 2.3.0-2 [116 kB]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [134 kB]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.40.0-1 [463 kB]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-5 [602 kB]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b5 [36.5 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.46.2-3 [172 kB]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.46.2-3 [55.7 kB]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.46.2-3 [46.7 kB]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf libpathplan4 armhf 2.42.2-4+b2 [62.1 kB]
Get:207 http://172.17.0.1/private bullseye-staging/main armhf libgvc6 armhf 2.42.2-4+b2 [587 kB]
Get:208 http://172.17.0.1/private bullseye-staging/main armhf libgvpr2 armhf 2.42.2-4+b2 [185 kB]
Get:209 http://172.17.0.1/private bullseye-staging/main armhf liblab-gamut1 armhf 2.42.2-4+b2 [221 kB]
Get:210 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.2.0-1 [159 kB]
Get:211 http://172.17.0.1/private bullseye-staging/main armhf libxmu6 armhf 2:1.1.2-2+b3 [52.1 kB]
Get:212 http://172.17.0.1/private bullseye-staging/main armhf libxaw7 armhf 2:1.0.13-1.1 [166 kB]
Get:213 http://172.17.0.1/private bullseye-staging/main armhf graphviz armhf 2.42.2-4+b2 [498 kB]
Get:214 http://172.17.0.1/private bullseye-staging/main armhf hdf5-helpers armhf 1.10.6+repack-2 [40.0 kB]
Get:215 http://172.17.0.1/private bullseye-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:216 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 67.1-6 [172 kB]
Get:217 http://172.17.0.1/private bullseye-staging/main armhf imagemagick-6.q16 armhf 8:6.9.11.24+dfsg-1+b2 [380 kB]
Get:218 http://172.17.0.1/private bullseye-staging/main armhf imagemagick armhf 8:6.9.11.24+dfsg-1+b2 [163 kB]
Get:219 http://172.17.0.1/private bullseye-staging/main armhf libaec0 armhf 1.0.4-1 [20.0 kB]
Get:220 http://172.17.0.1/private bullseye-staging/main armhf libsz2 armhf 1.0.4-1 [6664 B]
Get:221 http://172.17.0.1/private bullseye-staging/main armhf libaec-dev armhf 1.0.4-1 [17.8 kB]
Get:222 http://172.17.0.1/private bullseye-staging/main armhf libsuitesparseconfig5 armhf 1:5.8.1+dfsg-2 [22.6 kB]
Get:223 http://172.17.0.1/private bullseye-staging/main armhf libamd2 armhf 1:5.8.1+dfsg-2 [29.3 kB]
Get:224 http://172.17.0.1/private bullseye-staging/main armhf libapache-pom-java all 18-1 [4676 B]
Get:225 http://172.17.0.1/private bullseye-staging/main armhf libboost1.74-dev armhf 1.74.0-8 [9534 kB]
Get:226 http://172.17.0.1/private bullseye-staging/main armhf libboost-date-time1.74.0 armhf 1.74.0-8 [241 kB]
Get:227 http://172.17.0.1/private bullseye-staging/main armhf libboost-serialization1.74.0 armhf 1.74.0-8 [319 kB]
Get:228 http://172.17.0.1/private bullseye-staging/main armhf libboost-serialization1.74-dev armhf 1.74.0-8 [388 kB]
Get:229 http://172.17.0.1/private bullseye-staging/main armhf libboost-date-time1.74-dev armhf 1.74.0-8 [250 kB]
Get:230 http://172.17.0.1/private bullseye-staging/main armhf libboost-date-time-dev armhf 1.74.0.3+b1 [4604 B]
Get:231 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.74.0.3+b1 [4820 B]
Get:232 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex1.74.0 armhf 1.74.0-8 [447 kB]
Get:233 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 67.1-6 [9229 kB]
Get:234 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex1.74-dev armhf 1.74.0-8 [553 kB]
Get:235 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams1.74.0 armhf 1.74.0-8 [259 kB]
Get:236 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams1.74-dev armhf 1.74.0-8 [269 kB]
Get:237 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams-dev armhf 1.74.0.3+b1 [4588 B]
Get:238 http://172.17.0.1/private bullseye-staging/main armhf libboost-math1.74.0 armhf 1.74.0-8 [344 kB]
Get:239 http://172.17.0.1/private bullseye-staging/main armhf libboost-math1.74-dev armhf 1.74.0-8 [402 kB]
Get:240 http://172.17.0.1/private bullseye-staging/main armhf libboost-math-dev armhf 1.74.0.3+b1 [4804 B]
Get:241 http://172.17.0.1/private bullseye-staging/main armhf libbtf1 armhf 1:5.8.1+dfsg-2 [23.2 kB]
Get:242 http://172.17.0.1/private bullseye-staging/main armhf libcamd2 armhf 1:5.8.1+dfsg-2 [29.8 kB]
Get:243 http://172.17.0.1/private bullseye-staging/main armhf libccolamd2 armhf 1:5.8.1+dfsg-2 [30.5 kB]
Get:244 http://172.17.0.1/private bullseye-staging/main armhf libcolamd2 armhf 1:5.8.1+dfsg-2 [27.4 kB]
Get:245 http://172.17.0.1/private bullseye-staging/main armhf libmetis5 armhf 5.1.0.dfsg-7 [133 kB]
Get:246 http://172.17.0.1/private bullseye-staging/main armhf libcholmod3 armhf 1:5.8.1+dfsg-2 [212 kB]
Get:247 http://172.17.0.1/private bullseye-staging/main armhf libcommons-parent-java all 43-1 [10.8 kB]
Get:248 http://172.17.0.1/private bullseye-staging/main armhf libcommons-logging-java all 1.2-2 [62.2 kB]
Get:249 http://172.17.0.1/private bullseye-staging/main armhf libcurl3-gnutls armhf 7.74.0-1 [301 kB]
Get:250 http://172.17.0.1/private bullseye-staging/main armhf libcxsparse3 armhf 1:5.8.1+dfsg-2 [51.6 kB]
Get:251 http://172.17.0.1/private bullseye-staging/main armhf libdrm-amdgpu1 armhf 2.4.103-2+rpi1 [27.3 kB]
Get:252 http://172.17.0.1/private bullseye-staging/main armhf libdrm-nouveau2 armhf 2.4.103-2+rpi1 [24.9 kB]
Get:253 http://172.17.0.1/private bullseye-staging/main armhf libdrm-radeon1 armhf 2.4.103-2+rpi1 [29.1 kB]
Get:254 http://172.17.0.1/private bullseye-staging/main armhf libxcb-glx0 armhf 1.14-2.1 [117 kB]
Get:255 http://172.17.0.1/private bullseye-staging/main armhf libxdamage1 armhf 1:1.1.5-2 [15.2 kB]
Get:256 http://172.17.0.1/private bullseye-staging/main armhf libxfixes3 armhf 1:5.0.3-2 [20.7 kB]
Get:257 http://172.17.0.1/private bullseye-staging/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.1 kB]
Get:258 http://172.17.0.1/private bullseye-staging/main armhf libsensors-config all 1:3.6.0-5 [32.2 kB]
Get:259 http://172.17.0.1/private bullseye-staging/main armhf libsensors5 armhf 1:3.6.0-5 [49.5 kB]
Get:260 http://172.17.0.1/private bullseye-staging/main armhf libvulkan1 armhf 1.2.162.0-1 [82.5 kB]
Get:261 http://172.17.0.1/private bullseye-staging/main armhf libgl1-mesa-dri armhf 20.3.3-1+rpi1 [5883 kB]
Get:262 http://172.17.0.1/private bullseye-staging/main armhf libglx-mesa0 armhf 20.3.3-1+rpi1 [171 kB]
Get:263 http://172.17.0.1/private bullseye-staging/main armhf libglx0 armhf 1.3.2-1 [25.8 kB]
Get:264 http://172.17.0.1/private bullseye-staging/main armhf libgl1 armhf 1.3.2-1 [106 kB]
Get:265 http://172.17.0.1/private bullseye-staging/main armhf xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB]
Get:266 http://172.17.0.1/private bullseye-staging/main armhf x11proto-dev all 2020.1-1 [594 kB]
Get:267 http://172.17.0.1/private bullseye-staging/main armhf x11proto-core-dev all 2020.1-1 [3404 B]
Get:268 http://172.17.0.1/private bullseye-staging/main armhf libxau-dev armhf 1:1.0.8-1+b2 [22.4 kB]
Get:269 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.9 kB]
Get:270 http://172.17.0.1/private bullseye-staging/main armhf xtrans-dev all 1.4.0-1 [98.7 kB]
Get:271 http://172.17.0.1/private bullseye-staging/main armhf libpthread-stubs0-dev armhf 0.4-1 [5344 B]
Get:272 http://172.17.0.1/private bullseye-staging/main armhf libxcb1-dev armhf 1.14-2.1 [171 kB]
Get:273 http://172.17.0.1/private bullseye-staging/main armhf libx11-dev armhf 2:1.7.0-2 [777 kB]
Get:274 http://172.17.0.1/private bullseye-staging/main armhf libglx-dev armhf 1.3.2-1 [16.3 kB]
Get:275 http://172.17.0.1/private bullseye-staging/main armhf libgl-dev armhf 1.3.2-1 [100 kB]
Get:276 http://172.17.0.1/private bullseye-staging/main armhf libegl-dev armhf 1.3.2-1 [19.6 kB]
Get:277 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29.2-1 [61.5 kB]
Get:278 http://172.17.0.1/private bullseye-staging/main armhf libeigen3-dev all 3.3.9-1 [858 kB]
Get:279 http://172.17.0.1/private bullseye-staging/main armhf libfontbox-java all 1:1.8.16-2 [211 kB]
Get:280 http://172.17.0.1/private bullseye-staging/main armhf libfontenc1 armhf 1:1.1.4-1 [22.3 kB]
Get:281 http://172.17.0.1/private bullseye-staging/main armhf libgles1 armhf 1.3.2-1 [13.2 kB]
Get:282 http://172.17.0.1/private bullseye-staging/main armhf libgles-dev armhf 1.3.2-1 [50.3 kB]
Get:283 http://172.17.0.1/private bullseye-staging/main armhf libglpk40 armhf 5.0-1 [327 kB]
Get:284 http://172.17.0.1/private bullseye-staging/main armhf libgmpxx4ldbl armhf 2:6.2.1+dfsg-1 [336 kB]
Get:285 http://172.17.0.1/private bullseye-staging/main armhf libgmp-dev armhf 2:6.2.1+dfsg-1 [583 kB]
Get:286 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:287 http://172.17.0.1/private bullseye-staging/main armhf libgraphblas3 armhf 1:5.8.1+dfsg-2 [4826 kB]
Get:288 http://172.17.0.1/private bullseye-staging/main armhf libklu1 armhf 1:5.8.1+dfsg-2 [51.1 kB]
Get:289 http://172.17.0.1/private bullseye-staging/main armhf libldl2 armhf 1:5.8.1+dfsg-2 [23.0 kB]
Get:290 http://172.17.0.1/private bullseye-staging/main armhf libmongoose2 armhf 1:5.8.1+dfsg-2 [43.3 kB]
Get:291 http://172.17.0.1/private bullseye-staging/main armhf libumfpack5 armhf 1:5.8.1+dfsg-2 [127 kB]
Get:292 http://172.17.0.1/private bullseye-staging/main armhf librbio2 armhf 1:5.8.1+dfsg-2 [31.9 kB]
Get:293 http://172.17.0.1/private bullseye-staging/main armhf libspqr2 armhf 1:5.8.1+dfsg-2 [68.7 kB]
Get:294 http://172.17.0.1/private bullseye-staging/main armhf libsliplu1 armhf 1:5.8.1+dfsg-2 [48.1 kB]
Get:295 http://172.17.0.1/private bullseye-staging/main armhf libsuitesparse-dev armhf 1:5.8.1+dfsg-2 [5224 kB]
Get:296 http://172.17.0.1/private bullseye-staging/main armhf libglpk-dev armhf 5.0-1 [369 kB]
Get:297 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-103-1 armhf 1.10.6+repack-2 [1184 kB]
Get:298 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-cpp-103-1 armhf 1.10.6+repack-2 [128 kB]
Get:299 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-fortran-102 armhf 1.10.6+repack-2 [93.0 kB]
Get:300 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-hl-100 armhf 1.10.6+repack-2 [78.1 kB]
Get:301 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-hl-fortran-100 armhf 1.10.6+repack-2 [49.8 kB]
Get:302 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-hl-cpp-100 armhf 1.10.6+repack-2 [36.9 kB]
Get:303 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:2.0.5-2 [239 kB]
Get:304 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev armhf 1:2.0.5-2 [66.2 kB]
Get:305 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-dev armhf 1.10.6+repack-2 [2167 kB]
Get:306 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB]
Get:307 http://172.17.0.1/private bullseye-staging/main armhf libkpathsea6 armhf 2020.20200327.54578-6 [163 kB]
Get:308 http://172.17.0.1/private bullseye-staging/main armhf libmime-charset-perl all 1.012.2-1 [35.4 kB]
Get:309 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:310 http://172.17.0.1/private bullseye-staging/main armhf libpdfbox-java all 1:1.8.16-2 [5205 kB]
Get:311 http://172.17.0.1/private bullseye-staging/main armhf libptexenc1 armhf 2020.20200327.54578-6 [61.1 kB]
Get:312 http://172.17.0.1/private bullseye-staging/main armhf libqt5concurrent5 armhf 5.15.2+dfsg-2+rpi1 [69.1 kB]
Get:313 http://172.17.0.1/private bullseye-staging/main armhf libqt5opengl5 armhf 5.15.2+dfsg-2+rpi1 [153 kB]
Get:314 http://172.17.0.1/private bullseye-staging/main armhf libqt5printsupport5 armhf 5.15.2+dfsg-2+rpi1 [210 kB]
Get:315 http://172.17.0.1/private bullseye-staging/main armhf libqt5sql5 armhf 5.15.2+dfsg-2+rpi1 [135 kB]
Get:316 http://172.17.0.1/private bullseye-staging/main armhf libqt5test5 armhf 5.15.2+dfsg-2+rpi1 [157 kB]
Get:317 http://172.17.0.1/private bullseye-staging/main armhf libqt5xml5 armhf 5.15.2+dfsg-2+rpi1 [135 kB]
Get:318 http://172.17.0.1/private bullseye-staging/main armhf libvulkan-dev armhf 1.2.162.0-1 [586 kB]
Get:319 http://172.17.0.1/private bullseye-staging/main armhf x11proto-xext-dev all 2020.1-1 [3404 B]
Get:320 http://172.17.0.1/private bullseye-staging/main armhf libxext-dev armhf 2:1.3.3-1.1 [102 kB]
Get:321 http://172.17.0.1/private bullseye-staging/main armhf qt5-qmake-bin armhf 5.15.2+dfsg-2+rpi1 [820 kB]
Get:322 http://172.17.0.1/private bullseye-staging/main armhf qtchooser armhf 66-2 [23.1 kB]
Get:323 http://172.17.0.1/private bullseye-staging/main armhf qt5-qmake armhf 5.15.2+dfsg-2+rpi1 [248 kB]
Get:324 http://172.17.0.1/private bullseye-staging/main armhf qtbase5-dev-tools armhf 5.15.2+dfsg-2+rpi1 [649 kB]
Get:325 http://172.17.0.1/private bullseye-staging/main armhf qtbase5-dev armhf 5.15.2+dfsg-2+rpi1 [1095 kB]
Get:326 http://172.17.0.1/private bullseye-staging/main armhf libqt5opengl5-dev armhf 5.15.2+dfsg-2+rpi1 [77.4 kB]
Get:327 http://172.17.0.1/private bullseye-staging/main armhf libsombok3 armhf 2.4.0-2 [26.8 kB]
Get:328 http://172.17.0.1/private bullseye-staging/main armhf libsqlite3-dev armhf 3.34.1-1 [851 kB]
Get:329 http://172.17.0.1/private bullseye-staging/main armhf libsvm3 armhf 3.24+ds-6 [38.5 kB]
Get:330 http://172.17.0.1/private bullseye-staging/main armhf libsvm-dev armhf 3.24+ds-6 [59.5 kB]
Get:331 http://172.17.0.1/private bullseye-staging/main armhf libsynctex2 armhf 2020.20200327.54578-6 [70.1 kB]
Get:332 http://172.17.0.1/private bullseye-staging/main armhf libteckit0 armhf 2.5.10+ds1-3 [252 kB]
Get:333 http://172.17.0.1/private bullseye-staging/main armhf libtexlua53 armhf 2020.20200327.54578-6 [102 kB]
Get:334 http://172.17.0.1/private bullseye-staging/main armhf libtexluajit2 armhf 2020.20200327.54578-6 [208 kB]
Get:335 http://172.17.0.1/private bullseye-staging/main armhf libunicode-linebreak-perl armhf 0.0.20190101-1+b2 [97.8 kB]
Get:336 http://172.17.0.1/private bullseye-staging/main armhf libwildmagic-common all 5.17+cleaned1-5 [7020 kB]
Get:337 http://172.17.0.1/private bullseye-staging/main armhf libwildmagic5 armhf 5.17+cleaned1-5 [1303 kB]
Get:338 http://172.17.0.1/private bullseye-staging/main armhf libwildmagic-dev armhf 5.17+cleaned1-5 [316 kB]
Get:339 http://172.17.0.1/private bullseye-staging/main armhf libxerces-c3.2 armhf 3.2.3+debian-3 [710 kB]
Get:340 http://172.17.0.1/private bullseye-staging/main armhf libxerces-c-dev armhf 3.2.3+debian-3 [1485 kB]
Get:341 http://172.17.0.1/private bullseye-staging/main armhf libxi6 armhf 2:1.7.10-1 [77.9 kB]
Get:342 http://172.17.0.1/private bullseye-staging/main armhf libzzip-0-13 armhf 0.13.62-3.2 [51.6 kB]
Get:343 http://172.17.0.1/private bullseye-staging/main armhf xfonts-encodings all 1:1.0.4-2.1 [573 kB]
Get:344 http://172.17.0.1/private bullseye-staging/main armhf xfonts-utils armhf 1:7.7+6 [82.5 kB]
Get:345 http://172.17.0.1/private bullseye-staging/main armhf lmodern all 2.004.5-6.1 [9489 kB]
Get:346 http://172.17.0.1/private bullseye-staging/main armhf preview-latex-style all 12.2-1 [201 kB]
Get:347 http://172.17.0.1/private bullseye-staging/main armhf seqan-dev all 1.4.2+dfsg-4 [1096 kB]
Get:348 http://172.17.0.1/private bullseye-staging/main armhf t1utils armhf 1.41-4 [52.3 kB]
Get:349 http://172.17.0.1/private bullseye-staging/main armhf tex-gyre all 20180621-3.1 [6210 kB]
Get:350 http://172.17.0.1/private bullseye-staging/main armhf texlive-binaries armhf 2020.20200327.54578-6 [6888 kB]
Get:351 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-2 [74.6 kB]
Get:352 http://172.17.0.1/private bullseye-staging/main armhf texlive-base all 2020.20210113-1 [20.8 MB]
Get:353 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-base all 2020.20210113-1 [1118 kB]
Get:354 http://172.17.0.1/private bullseye-staging/main armhf texlive-luatex all 2020.20210113-1 [14.2 MB]
Get:355 http://172.17.0.1/private bullseye-staging/main armhf texlive-plain-generic all 2020.20210113-1 [27.0 MB]
Get:356 http://172.17.0.1/private bullseye-staging/main armhf texlive-extra-utils all 2020.20210113-1 [55.4 MB]
Get:357 http://172.17.0.1/private bullseye-staging/main armhf texlive-font-utils all 2020.20210113-1 [4630 kB]
Get:358 http://172.17.0.1/private bullseye-staging/main armhf texlive-fonts-extra all 2020.20210113-1 [504 MB]
Get:359 http://172.17.0.1/private bullseye-staging/main armhf texlive-fonts-recommended all 2020.20210113-1 [5004 kB]
Get:360 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-recommended all 2020.20210113-1 [14.5 MB]
Get:361 http://172.17.0.1/private bullseye-staging/main armhf texlive-pictures all 2020.20210113-1 [6665 kB]
Get:362 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-extra all 2020.20210113-1 [13.6 MB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up libboost-math-dev:armhf (1.74.0.3+b1) ...
Setting up libxcb-glx0:armhf (1.14-2.1) ...
Setting up libwebpdemux2:armhf (0.6.1-2) ...
Setting up libedit2:armhf (3.1-20191231-2) ...
Setting up libheif1:armhf (1.10.0-2) ...
Setting up libcommons-parent-java (43-1) ...
Setting up libxcb-keysyms1:armhf (0.4.0-1+b2) ...
Setting up libaec-dev:armhf (1.0.4-1) ...
Setting up libxcb-shape0:armhf (1.14-2.1) ...
Setting up libavahi-common3:armhf (0.8-3+b2) ...
Setting up libjpeg-dev:armhf (1:2.0.5-2) ...
Setting up libcommons-logging-java (1.2-2) ...
Setting up m4 (1.4.18-5) ...
Setting up libxcb-render-util0:armhf (0.3.9-1+b1) ...
Setting up libcurl3-gnutls:armhf (7.74.0-1) ...
Setting up libxcb-shm0:armhf (1.14-2.1) ...
Setting up libxcb-icccm4:armhf (0.4.1-1.1) ...
Setting up libpaper-utils (1.1.28) ...
Setting up libxcb-util1:armhf (0.4.0-1) ...
Setting up libxcb-xkb1:armhf (1.14-2.1) ...
Setting up libxcb-image0:armhf (0.4.0-1+b3) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libsliplu1:armhf (1:5.8.1+dfsg-2) ...
Setting up libxcb-present0:armhf (1.14-2.1) ...
Setting up tex-common (6.15) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up coinor-libcoinutils3v5 (2.11.4+repack1-1) ...
Setting up libthai0:armhf (0.1.28-3) ...
Setting up libcamd2:armhf (1:5.8.1+dfsg-2) ...
Setting up libmongoose2:armhf (1:5.8.1+dfsg-2) ...
Setting up libxdmcp-dev:armhf (1:1.1.2-3) ...
Setting up libxcb-xinerama0:armhf (1.14-2.1) ...
Setting up libllvm11:armhf (1:11.0.1-2+rpi1) ...
Setting up libptexenc1:armhf (2020.20200327.54578-6) ...
Setting up libfreetype6:armhf (2.10.4+dfsg-1) ...
Setting up libglpk40:armhf (5.0-1) ...
Setting up libxcb-sync1:armhf (1.14-2.1) ...
Setting up x11proto-core-dev (2020.1-1) ...
Setting up shared-mime-info (2.0-1) ...
Setting up libxkbcommon-x11-0:armhf (1.0.3-2) ...
Setting up libsvm-dev:armhf (3.24+ds-6) ...
Setting up liblapack-dev:armhf (3.9.0-3) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libeigen3-dev (3.3.9-1) ...
Setting up libclang1-11 (1:11.0.1-2+rpi1) ...
Setting up coinor-libcoinutils-dev (2.11.4+repack1-1) ...
Setting up libqt5core5a:armhf (5.15.2+dfsg-2+rpi1) ...
Setting up coinor-libosi1v5 (0.108.6+repack1-1) ...
Setting up autoconf (2.69-14) ...
Setting up libboost-serialization1.74-dev:armhf (1.74.0-8) ...
Setting up libxcb-dri2-0:armhf (1.14-2.1) ...
Setting up dh-strip-nondeterminism (1.10.0-1) ...
Setting up libgvpr2:armhf (2.42.2-4+b2) ...
Setting up x11proto-xext-dev (2020.1-1) ...
Setting up libdrm2:armhf (2.4.103-2+rpi1) ...
Setting up libhdf5-103-1:armhf (1.10.6+repack-2) ...
Setting up dwz (0.13+20210118-1) ...
Setting up libboost-regex1.74-dev:armhf (1.74.0-8) ...
Setting up groff-base (1.22.4-5) ...
Setting up libklu1:armhf (1:5.8.1+dfsg-2) ...
Setting up libqt5dbus5:armhf (5.15.2+dfsg-2+rpi1) ...
Setting up libccolamd2:armhf (1:5.8.1+dfsg-2) ...
Setting up libxcb-randr0:armhf (1.14-2.1) ...
Setting up procps (2:3.3.16-5) ...
update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode
Setting up libhdf5-cpp-103-1:armhf (1.10.6+repack-2) ...
Setting up libcurl4:armhf (7.74.0-1) ...
Setting up libx11-6:armhf (2:1.7.0-2) ...
Setting up libharfbuzz0b:armhf (2.7.4-1) ...
Setting up libfontconfig1:armhf (2.13.1-4.2) ...
Setting up libqt5test5:armhf (5.15.2+dfsg-2+rpi1) ...
Setting up libwacom2:armhf (1.7-1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libqt5concurrent5:armhf (5.15.2+dfsg-2+rpi1) ...
Setting up libavahi-client3:armhf (0.8-3+b2) ...
Setting up libcholmod3:armhf (1:5.8.1+dfsg-2) ...
Setting up python3.9 (3.9.1-2+rpi1) ...
Setting up libdrm-amdgpu1:armhf (2.4.103-2+rpi1) ...
Setting up libhdf5-hl-100:armhf (1.10.6+repack-2) ...
Setting up automake (1:1.16.3-2) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libxcb-dri3-0:armhf (1.14-2.1) ...
Setting up libspqr2:armhf (1:5.8.1+dfsg-2) ...
Setting up libx11-xcb1:armhf (2:1.7.0-2) ...
Setting up fontconfig (2.13.1-4.2) ...
Regenerating fonts cache... done.
Setting up libdrm-nouveau2:armhf (2.4.103-2+rpi1) ...
Setting up libxdamage1:armhf (1:1.1.5-2) ...
Setting up libxcb1-dev:armhf (1.14-2.1) ...
Setting up libxerces-c3.2:armhf (3.2.3+debian-3) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libgbm1:armhf (20.3.3-1+rpi1) ...
Setting up libsombok3:armhf (2.4.0-2) ...
Setting up libdrm-radeon1:armhf (2.4.103-2+rpi1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up preview-latex-style (12.2-1) ...
Setting up coinor-libosi-dev (0.108.6+repack1-1) ...
Setting up libpango-1.0-0:armhf (1.46.2-3) ...
Setting up libgl1-mesa-dri:armhf (20.3.3-1+rpi1) ...
Setting up libx11-dev:armhf (2:1.7.0-2) ...
Setting up libxext6:armhf (2:1.3.3-1.1) ...
Setting up python3 (3.9.1-1) ...
Setting up xfonts-utils (1:7.7+6) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libcairo2:armhf (1.16.0-5) ...
Setting up libqt5network5:armhf (5.15.2+dfsg-2+rpi1) ...
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up libinput-bin (1.16.4-3) ...
Setting up libclang-cpp11 (1:11.0.1-2+rpi1) ...
Setting up libqt5sql5:armhf (5.15.2+dfsg-2+rpi1) ...
Setting up libboost-iostreams1.74-dev:armhf (1.74.0-8) ...
Setting up libboost-date-time1.74-dev:armhf (1.74.0-8) ...
Setting up qtbase5-dev-tools (5.15.2+dfsg-2+rpi1) ...
Setting up libmagickcore-6.q16-6:armhf (8:6.9.11.24+dfsg-1+b2) ...
Setting up libqt5xml5:armhf (5.15.2+dfsg-2+rpi1) ...
Setting up libegl-mesa0:armhf (20.3.3-1+rpi1) ...
Setting up libhdf5-hl-cpp-100:armhf (1.10.6+repack-2) ...
Setting up doxygen (1.9.1-1) ...
Setting up libumfpack5:armhf (1:5.8.1+dfsg-2) ...
Setting up libxfixes3:armhf (1:5.0.3-2) ...
Setting up libxerces-c-dev:armhf (3.2.3+debian-3) ...
Setting up coinor-libclp1 (1.17.5+repack1-1) ...
Setting up libunicode-linebreak-perl (0.0.20190101-1+b2) ...
Setting up libgd3:armhf (2.3.0-2) ...
Setting up coinor-libclp-dev (1.17.5+repack1-1) ...
Setting up libhdf5-fortran-102:armhf (1.10.6+repack-2) ...
Setting up libboost-date-time-dev:armhf (1.74.0.3+b1) ...
Setting up libxt6:armhf (1:1.2.0-1) ...
Setting up libxext-dev:armhf (2:1.3.3-1.1) ...
Setting up libcups2:armhf (2.3.3op1-7) ...
Setting up lmodern (2.004.5-6.1) ...
Setting up libegl1:armhf (1.3.2-1) ...
Setting up cmake (3.18.4-1+rpi1+b1) ...
Setting up libhdf5-hl-fortran-100:armhf (1.10.6+repack-2) ...
Setting up libmagickwand-6.q16-6:armhf (8:6.9.11.24+dfsg-1+b2) ...
Setting up coinor-libcgl1 (0.60.3+repack1-2) ...
Setting up libpangoft2-1.0-0:armhf (1.46.2-3) ...
Setting up tex-gyre (20180621-3.1) ...
Setting up libpangocairo-1.0-0:armhf (1.46.2-3) ...
Setting up coinor-libcgl-dev (0.60.3+repack1-2) ...
Setting up python3-pkg-resources (51.3.3-1) ...
Setting up libinput10:armhf (1.16.4-3) ...
Setting up coinor-libcbc3:armhf (2.10.5+ds1-3) ...
Setting up libxmu6:armhf (2:1.1.2-2+b3) ...
Setting up libglx-mesa0:armhf (20.3.3-1+rpi1) ...
Setting up libgs9:armhf (9.53.3~dfsg-6) ...
Setting up libxi6:armhf (2:1.7.10-1) ...
Setting up libglx0:armhf (1.3.2-1) ...
Setting up libsuitesparse-dev:armhf (1:5.8.1+dfsg-2) ...
Setting up libqt5gui5:armhf (5.15.2+dfsg-2+rpi1) ...
Setting up libqt5widgets5:armhf (5.15.2+dfsg-2+rpi1) ...
Setting up libxaw7:armhf (2:1.0.13-1.1) ...
Setting up libboost-iostreams-dev:armhf (1.74.0.3+b1) ...
Setting up ghostscript (9.53.3~dfsg-6) ...
Setting up libqt5printsupport5:armhf (5.15.2+dfsg-2+rpi1) ...
Setting up python3-pygments (2.7.1+dfsg-1) ...
Setting up libgl1:armhf (1.3.2-1) ...
Setting up libglpk-dev:armhf (5.0-1) ...
Setting up libhdf5-dev (1.10.6+repack-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up libgvc6 (2.42.2-4+b2) ...
Setting up cppcheck (2.3-1) ...
Setting up imagemagick-6.q16 (8:6.9.11.24+dfsg-1+b2) ...
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode
Setting up libqt5opengl5:armhf (5.15.2+dfsg-2+rpi1) ...
Setting up texlive-binaries (2020.20200327.54578-6) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libglx-dev:armhf (1.3.2-1) ...
Setting up coinor-libcbc-dev:armhf (2.10.5+ds1-3) ...
Setting up texlive-base (2020.20210113-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
Setting up libgl-dev:armhf (1.3.2-1) ...
Setting up graphviz (2.42.2-4+b2) ...
Setting up libegl-dev:armhf (1.3.2-1) ...
Setting up texlive-luatex (2020.20210113-1) ...
Setting up libqt5svg5:armhf (5.15.2-2) ...
Setting up texlive-plain-generic (2020.20210113-1) ...
Setting up libwildmagic5:armhf (5.17+cleaned1-5) ...
Setting up texlive-font-utils (2020.20210113-1) ...
Setting up libqt5svg5-dev:armhf (5.15.2-2) ...
Setting up texlive-latex-base (2020.20210113-1) ...
Setting up texlive-extra-utils (2020.20210113-1) ...
Setting up texlive-fonts-extra (2020.20210113-1) ...
Setting up texlive-latex-recommended (2020.20210113-1) ...
Setting up texlive-pictures (2020.20210113-1) ...
Setting up imagemagick (8:6.9.11.24+dfsg-1+b2) ...
Setting up texlive-fonts-recommended (2020.20210113-1) ...
Setting up libgles-dev:armhf (1.3.2-1) ...
Setting up libwildmagic-dev:armhf (5.17+cleaned1-5) ...
Setting up texlive-latex-extra (2020.20210113-1) ...
Setting up qtbase5-dev:armhf (5.15.2+dfsg-2+rpi1) ...
Setting up libqt5opengl5-dev:armhf (5.15.2+dfsg-2+rpi1) ...
Setting up debhelper (13.3.1) ...
Setting up dh-exec (0.23.2+b3) ...
Setting up dh-autoreconf (19) ...
Setting up sbuild-build-depends-openms-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-9+rpi1) ...
Processing triggers for tex-common (6.15) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
This may take some time... done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.35.1-7+rpi1 dpkg-dev_1.20.7.1+rpi1 g++-10_10.2.1-6+rpi1 gcc-10_10.2.1-6+rpi1 libc6-dev_2.31-9+rpi1 libstdc++-10-dev_10.2.1-6+rpi1 libstdc++6_10.2.1-6+rpi1 linux-libc-dev_5.10.4-1+rpi1
Package versions: adduser_3.118 apt_2.1.18 autoconf_2.69-14 automake_1:1.16.3-2 autopoint_0.21-3 autotools-dev_20180224.1+nmu1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1-2 binutils_2.35.1-7+rpi1 binutils-arm-linux-gnueabihf_2.35.1-7+rpi1 binutils-common_2.35.1-7+rpi1 bsdextrautils_2.36.1-6 bsdutils_1:2.36.1-6 build-essential_12.9 bzip2_1.0.8-4 cmake_3.18.4-1+rpi1+b1 cmake-data_3.18.4-1+rpi1 coinor-libcbc-dev_2.10.5+ds1-3 coinor-libcbc3_2.10.5+ds1-3 coinor-libcgl-dev_0.60.3+repack1-2 coinor-libcgl1_0.60.3+repack1-2 coinor-libclp-dev_1.17.5+repack1-1 coinor-libclp1_1.17.5+repack1-1 coinor-libcoinutils-dev_2.11.4+repack1-1 coinor-libcoinutils3v5_2.11.4+repack1-1 coinor-libosi-dev_0.108.6+repack1-1 coinor-libosi1v5_0.108.6+repack1-1 coreutils_8.32-4 cpp_4:10.2.1-1+rpi1 cpp-10_10.2.1-6+rpi1 cppcheck_2.3-1 dash_0.5.11+git20200708+dd9ef66-5 debconf_1.5.74 debhelper_13.3.1 debianutils_4.11.2 dh-autoreconf_19 dh-exec_0.23.2+b3 dh-strip-nondeterminism_1.10.0-1 diffutils_1:3.7-5 dirmngr_2.2.20-1 doxygen_1.9.1-1 dpkg_1.20.7.1+rpi1 dpkg-dev_1.20.7.1+rpi1 dwz_0.13+20210118-1 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.8.0-1 fontconfig_2.13.1-4.2 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-2 fonts-lmodern_2.004.5-6.1 fonts-urw-base35_20200910-1 g++_4:10.2.1-1+rpi1 g++-10_10.2.1-6+rpi1 gcc_4:10.2.1-1+rpi1 gcc-10_10.2.1-6+rpi1 gcc-10-base_10.2.1-6+rpi1 gcc-6-base_6.5.0-1+rpi3 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-6+rpi1 gettext_0.21-3 gettext-base_0.21-3 ghostscript_9.53.3~dfsg-6 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 graphviz_2.42.2-4+b2 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 hdf5-helpers_1.10.6+repack-2 hicolor-icon-theme_0.17-2 hostname_3.23 icu-devtools_67.1-6 imagemagick_8:6.9.11.24+dfsg-1+b2 imagemagick-6-common_8:6.9.11.24+dfsg-1 imagemagick-6.q16_8:6.9.11.24+dfsg-1+b2 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 krb5-locales_1.18.3-4 libacl1_2.2.53-9 libaec-dev_1.0.4-1 libaec0_1.0.4-1 libamd2_1:5.8.1+dfsg-2 libaom0_1.0.0.errata1-3 libapache-pom-java_18-1 libapt-pkg6.0_2.1.18 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2 libasan6_10.2.1-6+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.1-6+rpi1 libattr1_1:2.4.48-6 libaudit-common_1:3.0-2 libaudit1_1:3.0-2 libavahi-client3_0.8-3+b2 libavahi-common-data_0.8-3+b2 libavahi-common3_0.8-3+b2 libbinutils_2.35.1-7+rpi1 libblas-dev_3.9.0-3 libblas3_3.9.0-3 libblkid1_2.36.1-6 libboost-date-time-dev_1.74.0.3+b1 libboost-date-time1.74-dev_1.74.0-8 libboost-date-time1.74.0_1.74.0-8 libboost-dev_1.74.0.3+b1 libboost-iostreams-dev_1.74.0.3+b1 libboost-iostreams1.74-dev_1.74.0-8 libboost-iostreams1.74.0_1.74.0-8 libboost-math-dev_1.74.0.3+b1 libboost-math1.74-dev_1.74.0-8 libboost-math1.74.0_1.74.0-8 libboost-regex1.74-dev_1.74.0-8 libboost-regex1.74.0_1.74.0-8 libboost-serialization1.74-dev_1.74.0-8 libboost-serialization1.74.0_1.74.0-8 libboost1.74-dev_1.74.0-8 libbrotli1_1.0.9-2+b1 libbsd0_0.10.0-1 libbtf1_1:5.8.1+dfsg-2 libbz2-1.0_1.0.8-4 libbz2-dev_1.0.8-4 libc-bin_2.31-9+rpi1 libc-dev-bin_2.31-9+rpi1 libc6_2.31-9+rpi1 libc6-dev_2.31-9+rpi1 libcairo2_1.16.0-5 libcamd2_1:5.8.1+dfsg-2 libcap-ng0_0.7.9-2.2+b1 libcc1-0_10.2.1-6+rpi1 libccolamd2_1:5.8.1+dfsg-2 libcdt5_2.42.2-4+b2 libcgraph6_2.42.2-4+b2 libcholmod3_1:5.8.1+dfsg-2 libclang-cpp11_1:11.0.1-2+rpi1 libclang1-11_1:11.0.1-2+rpi1 libcolamd2_1:5.8.1+dfsg-2 libcom-err2_1.45.6-1 libcommons-logging-java_1.2-2 libcommons-parent-java_43-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-7+rpi1 libctf0_2.35.1-7+rpi1 libcups2_2.3.3op1-7 libcurl3-gnutls_7.74.0-1 libcurl4_7.74.0-1 libcxsparse3_1:5.8.1+dfsg-2 libdatrie1_0.2.12-3+b5 libdav1d4_0.7.1-3+rpi1 libdb5.3_5.3.28+dfsg1-0.6 libdbus-1-3_1.12.20-1+b3 libde265-0_1.0.8-1+rpi1 libdebconfclient0_0.256 libdebhelper-perl_13.3.1 libdeflate0_1.7-1 libdouble-conversion3_3.1.5-6.1 libdpkg-perl_1.20.7.1+rpi1 libdrm-amdgpu1_2.4.103-2+rpi1 libdrm-common_2.4.103-2+rpi1 libdrm-nouveau2_2.4.103-2+rpi1 libdrm-radeon1_2.4.103-2+rpi1 libdrm2_2.4.103-2+rpi1 libedit2_3.1-20191231-2 libegl-dev_1.3.2-1 libegl-mesa0_20.3.3-1+rpi1 libegl1_1.3.2-1 libeigen3-dev_3.3.9-1 libelf1_0.182-3 libevdev2_1.10.1+dfsg-1+rpi1 libexpat1_2.2.10-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1.1 libffi7_3.3-5 libfftw3-double3_3.3.8-2 libfile-stripnondeterminism-perl_1.10.0-1 libfontbox-java_1:1.8.16-2 libfontconfig1_2.13.1-4.2 libfontenc1_1:1.1.4-1 libfreetype6_2.10.4+dfsg-1 libfribidi0_1.0.8-2 libgbm1_20.3.3-1+rpi1 libgcc-10-dev_10.2.1-6+rpi1 libgcc-s1_10.2.1-6+rpi1 libgcrypt20_1.8.7-2 libgd3_2.3.0-2 libgdbm-compat4_1.19-2 libgdbm6_1.19-2 libgfortran5_10.2.1-6+rpi1 libgl-dev_1.3.2-1 libgl1_1.3.2-1 libgl1-mesa-dri_20.3.3-1+rpi1 libglapi-mesa_20.3.3-1+rpi1 libgles-dev_1.3.2-1 libgles1_1.3.2-1 libgles2_1.3.2-1 libglib2.0-0_2.66.4-1 libglpk-dev_5.0-1 libglpk40_5.0-1 libglvnd0_1.3.2-1 libglx-dev_1.3.2-1 libglx-mesa0_20.3.3-1+rpi1 libglx0_1.3.2-1 libgmp-dev_2:6.2.1+dfsg-1 libgmp10_2:6.2.1+dfsg-1 libgmpxx4ldbl_2:6.2.1+dfsg-1 libgnutls30_3.7.0-5 libgomp1_10.2.1-6+rpi1 libgpg-error0_1.38-2 libgraphblas3_1:5.8.1+dfsg-2 libgraphite2-3_1.3.14-1 libgs9_9.53.3~dfsg-6 libgs9-common_9.53.3~dfsg-6 libgssapi-krb5-2_1.18.3-4 libgts-0.7-5_0.7.6+darcs121130-4 libgudev-1.0-0_234-1 libgvc6_2.42.2-4+b2 libgvpr2_2.42.2-4+b2 libharfbuzz0b_2.7.4-1 libhdf5-103-1_1.10.6+repack-2 libhdf5-cpp-103-1_1.10.6+repack-2 libhdf5-dev_1.10.6+repack-2 libhdf5-fortran-102_1.10.6+repack-2 libhdf5-hl-100_1.10.6+repack-2 libhdf5-hl-cpp-100_1.10.6+repack-2 libhdf5-hl-fortran-100_1.10.6+repack-2 libheif1_1.10.0-2 libhogweed6_3.6-2 libice6_2:1.0.10-1 libicu-dev_67.1-6 libicu67_67.1-6 libidn11_1.33-3 libidn2-0_2.3.0-5 libijs-0.35_0.35-15 libinput-bin_1.16.4-3 libinput10_1.16.4-3 libisl23_0.23-1 libjbig0_2.1-3.1+b2 libjbig2dec0_0.19-1 libjpeg-dev_1:2.0.5-2 libjpeg62-turbo_1:2.0.5-2 libjpeg62-turbo-dev_1:2.0.5-2 libjs-jquery_3.5.1+dfsg+~3.5.5-7 libjsoncpp24_1.9.4-4 libk5crypto3_1.18.3-4 libkeyutils1_1.6.1-2 libklu1_1:5.8.1+dfsg-2 libkpathsea6_2020.20200327.54578-6 libkrb5-3_1.18.3-4 libkrb5support0_1.18.3-4 libksba8_1.5.0-3 liblab-gamut1_2.42.2-4+b2 liblapack-dev_3.9.0-3 liblapack3_3.9.0-3 liblcms2-2_2.12~rc1-2 libldap-2.4-2_2.4.56+dfsg-1+rpi1+b1 libldap-common_2.4.56+dfsg-1+rpi1 libldl2_1:5.8.1+dfsg-2 libllvm11_1:11.0.1-2+rpi1 liblqr-1-0_0.4.2-2.1 libltdl7_2.4.6-15 liblz4-1_1.9.3-1+rpi1 liblzma5_5.2.5-1.0 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmagickcore-6.q16-6_8:6.9.11.24+dfsg-1+b2 libmagickwand-6.q16-6_8:6.9.11.24+dfsg-1+b2 libmd4c0_0.4.7-1 libmetis5_5.1.0.dfsg-7 libmime-charset-perl_1.012.2-1 libmongoose2_1:5.8.1+dfsg-2 libmount1_2.36.1-6 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmtdev1_1.1.6-1 libncurses6_6.2+20201114-2 libncursesw6_6.2+20201114-2 libnettle8_3.6-2 libnghttp2-14_1.42.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libopenjp2-7_2.3.1-1 libp11-kit0_0.23.22-1 libpam-modules_1.4.0-2 libpam-modules-bin_1.4.0-2 libpam-runtime_1.4.0-2 libpam0g_1.4.0-2 libpango-1.0-0_1.46.2-3 libpangocairo-1.0-0_1.46.2-3 libpangoft2-1.0-0_1.46.2-3 libpaper-utils_1.1.28 libpaper1_1.1.28 libpathplan4_2.42.2-4+b2 libpcre2-16-0_10.36-2 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libpdfbox-java_1:1.8.16-2 libperl5.32_5.32.0-6 libpipeline1_1.5.3-1 libpixman-1-0_0.40.0-1 libpng16-16_1.6.37-3 libprocps8_2:3.3.16-5 libpsl5_0.21.0-1.1 libptexenc1_2020.20200327.54578-6 libpthread-stubs0-dev_0.4-1 libpython3-stdlib_3.9.1-1 libpython3.9-minimal_3.9.1-2+rpi1 libpython3.9-stdlib_3.9.1-2+rpi1 libqt5concurrent5_5.15.2+dfsg-2+rpi1 libqt5core5a_5.15.2+dfsg-2+rpi1 libqt5dbus5_5.15.2+dfsg-2+rpi1 libqt5gui5_5.15.2+dfsg-2+rpi1 libqt5network5_5.15.2+dfsg-2+rpi1 libqt5opengl5_5.15.2+dfsg-2+rpi1 libqt5opengl5-dev_5.15.2+dfsg-2+rpi1 libqt5printsupport5_5.15.2+dfsg-2+rpi1 libqt5sql5_5.15.2+dfsg-2+rpi1 libqt5svg5_5.15.2-2 libqt5svg5-dev_5.15.2-2 libqt5test5_5.15.2+dfsg-2+rpi1 libqt5widgets5_5.15.2+dfsg-2+rpi1 libqt5xml5_5.15.2+dfsg-2+rpi1 librbio2_1:5.8.1+dfsg-2 libreadline8_8.1-1 librhash0_1.4.1-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.5.1-1+rpi1 libselinux1_3.1-2+b1 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsensors-config_1:3.6.0-5 libsensors5_1:3.6.0-5 libsepol1_3.1-1 libsigsegv2_2.12-3 libsliplu1_1:5.8.1+dfsg-2 libsm6_2:1.2.3-1 libsmartcols1_2.36.1-6 libsombok3_2.4.0-2 libspqr2_1:5.8.1+dfsg-2 libsqlite3-0_3.34.1-1 libsqlite3-dev_3.34.1-1 libss2_1.45.6-1 libssh2-1_1.9.0-2 libssl1.1_1.1.1i-2 libstdc++-10-dev_10.2.1-6+rpi1 libstdc++6_10.2.1-6+rpi1 libsub-override-perl_0.09-2 libsuitesparse-dev_1:5.8.1+dfsg-2 libsuitesparseconfig5_1:5.8.1+dfsg-2 libsvm-dev_3.24+ds-6 libsvm3_3.24+ds-6 libsynctex2_2020.20200327.54578-6 libsystemd0_247.2-5+rpi1 libsz2_1.0.4-1 libtasn1-6_4.16.0-2 libteckit0_2.5.10+ds1-3 libtexlua53_2020.20200327.54578-6 libtexluajit2_2020.20200327.54578-6 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.2.0-1 libtinfo6_6.2+20201114-2 libtinyxml2-8_8.0.0+dfsg-2 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 libtirpc3_1.3.1-1 libtool_2.4.6-15 libubsan1_10.2.1-6+rpi1 libuchardet0_0.0.7-1 libudev1_247.2-5+rpi1 libumfpack5_1:5.8.1+dfsg-2 libunicode-linebreak-perl_0.0.20190101-1+b2 libunistring2_0.9.10-4 libuuid1_2.36.1-6 libuv1_1.40.0-1 libvulkan-dev_1.2.162.0-1 libvulkan1_1.2.162.0-1 libwacom-common_1.7-1 libwacom2_1.7-1 libwayland-client0_1.18.0-2~exp1.1 libwayland-server0_1.18.0-2~exp1.1 libwebp6_0.6.1-2 libwebpdemux2_0.6.1-2 libwebpmux3_0.6.1-2 libwildmagic-common_5.17+cleaned1-5 libwildmagic-dev_5.17+cleaned1-5 libwildmagic5_5.17+cleaned1-5 libx11-6_2:1.7.0-2 libx11-data_2:1.7.0-2 libx11-dev_2:1.7.0-2 libx11-xcb1_2:1.7.0-2 libx265-192_3.4-2 libxapian30_1.4.18-1 libxau-dev_1:1.0.8-1+b2 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1.1 libxcb-dri2-0_1.14-2.1 libxcb-dri3-0_1.14-2.1 libxcb-glx0_1.14-2.1 libxcb-icccm4_0.4.1-1.1 libxcb-image0_0.4.0-1+b3 libxcb-keysyms1_0.4.0-1+b2 libxcb-present0_1.14-2.1 libxcb-randr0_1.14-2.1 libxcb-render-util0_0.3.9-1+b1 libxcb-render0_1.14-2.1 libxcb-shape0_1.14-2.1 libxcb-shm0_1.14-2.1 libxcb-sync1_1.14-2.1 libxcb-util1_0.4.0-1 libxcb-xfixes0_1.14-2.1 libxcb-xinerama0_1.14-2.1 libxcb-xinput0_1.14-2.1 libxcb-xkb1_1.14-2.1 libxcb1_1.14-2.1 libxcb1-dev_1.14-2.1 libxdamage1_1:1.1.5-2 libxdmcp-dev_1:1.1.2-3 libxdmcp6_1:1.1.2-3 libxerces-c-dev_3.2.3+debian-3 libxerces-c3.2_3.2.3+debian-3 libxext-dev_2:1.3.3-1.1 libxext6_2:1.3.3-1.1 libxfixes3_1:5.0.3-2 libxi6_2:1.7.10-1 libxkbcommon-x11-0_1.0.3-2 libxkbcommon0_1.0.3-2 libxml2_2.9.10+dfsg-6.3 libxmu6_2:1.1.2-2+b3 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxshmfence1_1.3-1 libxt6_1:1.2.0-1 libxxf86vm1_1:1.1.4-1+b2 libxxhash0_0.8.0-2+rpi1 libz3-4_4.8.9-1 libzstd1_1.4.8+dfsg-1 libzzip-0-13_0.13.62-3.2 linux-libc-dev_5.10.4-1+rpi1 lmodern_2.004.5-6.1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-5 mailcap_3.68 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 media-types_4.0.0 mime-support_3.66 mount_2.36.1-6 ncurses-base_6.2+20201114-2 ncurses-bin_6.2+20201114-2 netbase_6.2 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.0-6 perl-base_5.32.0-6 perl-modules-5.32_5.32.0-6 pinentry-curses_1.1.0-4 pkg-config_0.29.2-1 po-debconf_1.0.21+nmu1 poppler-data_0.4.10-1 preview-latex-style_12.2-1 procps_2:3.3.16-5 python3_3.9.1-1 python3-minimal_3.9.1-1 python3-pkg-resources_51.3.3-1 python3-pygments_2.7.1+dfsg-1 python3.9_3.9.1-2+rpi1 python3.9-minimal_3.9.1-2+rpi1 qt5-qmake_5.15.2+dfsg-2+rpi1 qt5-qmake-bin_5.15.2+dfsg-2+rpi1 qtbase5-dev_5.15.2+dfsg-2+rpi1 qtbase5-dev-tools_5.15.2+dfsg-2+rpi1 qtchooser_66-2 raspbian-archive-keyring_20120528.2 readline-common_8.1-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-openms-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.14 seqan-dev_1.4.2+dfsg-4 shared-mime-info_2.0-1 sysvinit-utils_2.96-5 t1utils_1.41-4 tar_1.32+dfsg-1+rpi1 tex-common_6.15 tex-gyre_20180621-3.1 texlive-base_2020.20210113-1 texlive-binaries_2020.20200327.54578-6 texlive-extra-utils_2020.20210113-1 texlive-font-utils_2020.20210113-1 texlive-fonts-extra_2020.20210113-1 texlive-fonts-recommended_2020.20210113-1 texlive-latex-base_2020.20210113-1 texlive-latex-extra_2020.20210113-1 texlive-latex-recommended_2020.20210113-1 texlive-luatex_2020.20210113-1 texlive-pictures_2020.20210113-1 texlive-plain-generic_2020.20210113-1 tzdata_2020f-1 ucf_3.0043 util-linux_2.36.1-6 x11-common_1:7.7+21 x11proto-core-dev_2020.1-1 x11proto-dev_2020.1-1 x11proto-xext-dev_2020.1-1 xdg-utils_1.1.3-2 xfonts-encodings_1:1.0.4-2.1 xfonts-utils_1:7.7+6 xkb-data_2.29-2 xorg-sgml-doctools_1:1.11-1.1 xtrans-dev_1.4.0-1 xz-utils_5.2.5-1.0 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.q6jXNq12/trustedkeys.kbx': General error
gpgv: Signature made Wed Jul 8 00:14:00 2020 UTC
gpgv: using RSA key B053304E17D6D419DD9B465141AB484D7694CF42
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./openms_2.5.0+cleaned1-5.dsc
dpkg-source: info: extracting openms in /<<BUILDDIR>>/openms-2.5.0+cleaned1
dpkg-source: info: unpacking openms_2.5.0+cleaned1.orig.tar.gz
dpkg-source: info: unpacking openms_2.5.0+cleaned1-5.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying sonameAndNameLinkSkipCmakeBuildSystem.patch
dpkg-source: info: applying installDirsSettingsCmakeBuildSystem.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-6a5d87a8-b6be-48ae-9cd8-1622c340f968
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package openms
dpkg-buildpackage: info: source version 2.5.0+cleaned1-5
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --buildsystem=cmake --no-parallel
dh_testdir -O--buildsystem=cmake -O--no-parallel
dh_auto_clean -O--buildsystem=cmake -O--no-parallel
dh_autoreconf_clean -O--buildsystem=cmake -O--no-parallel
debian/rules override_dh_clean
make[1]: Entering directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1'
entering the override_dh_clean target
# Remove the generated xpm icon files:
rm -f debian/TOPPAS.xpm
rm -f debian/TOPPView.xpm
# Remove the generated topp.1 man page:
rm -f debian/topp.1
dh_clean
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/libopenms2.5.0.substvars debian/libopenms-dev.substvars debian/topp.substvars debian/openms-common.substvars debian/openms-doc.substvars debian/openms.substvars debian/files
rm -fr -- debian/libopenms2.5.0/ debian/tmp/ debian/libopenms-dev/ debian/topp/ debian/openms-common/ debian/openms-doc/ debian/openms/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
make[1]: Leaving directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1'
debian/rules build-arch
dh build-arch --buildsystem=cmake --no-parallel
dh_testdir -a -O--buildsystem=cmake -O--no-parallel
dh_update_autotools_config -a -O--buildsystem=cmake -O--no-parallel
dh_autoreconf -a -O--buildsystem=cmake -O--no-parallel
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1'
dh_auto_configure -- \
-DDEBIAN_BUILD=ON \
-DHAS_XSERVER=OFF \
-DCMAKE_FIND_LIBRARY_SUFFIXES=".so" \
-DCMAKE_SKIP_RPATH=ON \
-DCMAKE_INSTALL_PREFIX="/usr" \
-DOPENMS_CONTRIB_LIBS="/usr/lib;/usr/lib/arm-linux-gnueabihf" \
-DCMAKE_BUILD_TYPE=release \
-DBOOST_USE_STATIC=OFF \
-DENABLE_STYLE_TESTING=OFF \
-DENABLE_TOPP_TESTING=OFF \
-DENABLE_CLASS_TESTING=OFF \
-DENABLE_PIPELINE_TESTING=OFF \
-DENABLE_TUTORIALS=ON
install -d obj-arm-linux-gnueabihf
cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DDEBIAN_BUILD=ON -DHAS_XSERVER=OFF -DCMAKE_FIND_LIBRARY_SUFFIXES=.so -DCMAKE_SKIP_RPATH=ON -DCMAKE_INSTALL_PREFIX=/usr -DOPENMS_CONTRIB_LIBS=/usr/lib\;/usr/lib/arm-linux-gnueabihf -DCMAKE_BUILD_TYPE=release -DBOOST_USE_STATIC=OFF -DENABLE_STYLE_TESTING=OFF -DENABLE_TOPP_TESTING=OFF -DENABLE_CLASS_TESTING=OFF -DENABLE_PIPELINE_TESTING=OFF -DENABLE_TUTORIALS=ON ..
-- The C compiler identification is GNU 10.2.1
-- The CXX compiler identification is GNU 10.2.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Building OpenMS 2.5.0
-- - Repository revision GIT-NOTFOUND
-- - Repository branch GIT-NOTFOUND
-- - Repository last change date GIT-NOTFOUND
-- [CMake is tracking Git commits and branching ('-D GIT_TRACKING=On')]
-- OpenMP support requested: ON
-- Found OpenMP_C: -fopenmp (found version "4.5")
-- Found OpenMP_CXX: -fopenmp (found version "4.5")
-- Found OpenMP: TRUE (found version "4.5")
-- Architecture: 32 bit
-- Performing Test WITH_FPIC
-- Performing Test WITH_FPIC - Success
-- Compiler checks for conversion: OFF
-- Collection of usage statistics and update notifications enabled.
-- If you don't want this information to be transmitted to our update sever, you can:
-- - Switch the build variable ENABLE_UPDATE_CHECK to OFF to remove the functionality at build time.
-- - Set the environment variable OPENMS_DISABLE_UPDATE_CHECK to disable the functionality at runtime.
-- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.48.0")
-- Adding library OpenSwathAlgo
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
-- Adding library OpenSwathAlgo - SUCCESS
-- Found XercesC: /usr/lib/arm-linux-gnueabihf/libxerces-c.so (found version "3.2.3")
CMake Warning at /usr/share/cmake-3.18/Modules/FindBoost.cmake:1187 (message):
New Boost version may have incorrect or missing dependencies and imported
targets
Call Stack (most recent call first):
/usr/share/cmake-3.18/Modules/FindBoost.cmake:1311 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.18/Modules/FindBoost.cmake:1919 (_Boost_MISSING_DEPENDENCIES)
cmake/build_system_macros.cmake:90 (find_package)
src/openms/cmake_findExternalLibs.cmake:60 (find_boost)
src/openms/CMakeLists.txt:70 (include)
CMake Warning at /usr/share/cmake-3.18/Modules/FindBoost.cmake:1187 (message):
New Boost version may have incorrect or missing dependencies and imported
targets
Call Stack (most recent call first):
/usr/share/cmake-3.18/Modules/FindBoost.cmake:1311 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.18/Modules/FindBoost.cmake:1919 (_Boost_MISSING_DEPENDENCIES)
cmake/build_system_macros.cmake:90 (find_package)
src/openms/cmake_findExternalLibs.cmake:60 (find_boost)
src/openms/CMakeLists.txt:70 (include)
CMake Warning at /usr/share/cmake-3.18/Modules/FindBoost.cmake:1187 (message):
New Boost version may have incorrect or missing dependencies and imported
targets
Call Stack (most recent call first):
/usr/share/cmake-3.18/Modules/FindBoost.cmake:1311 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.18/Modules/FindBoost.cmake:1919 (_Boost_MISSING_DEPENDENCIES)
cmake/build_system_macros.cmake:90 (find_package)
src/openms/cmake_findExternalLibs.cmake:60 (find_boost)
src/openms/CMakeLists.txt:70 (include)
CMake Warning at /usr/share/cmake-3.18/Modules/FindBoost.cmake:1187 (message):
New Boost version may have incorrect or missing dependencies and imported
targets
Call Stack (most recent call first):
/usr/share/cmake-3.18/Modules/FindBoost.cmake:1311 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-3.18/Modules/FindBoost.cmake:1919 (_Boost_MISSING_DEPENDENCIES)
cmake/build_system_macros.cmake:90 (find_package)
src/openms/cmake_findExternalLibs.cmake:60 (find_boost)
src/openms/CMakeLists.txt:70 (include)
-- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.48.0") found components: iostreams date_time math_c99 regex
-- Found Boost version 1.74.0
-- Found SEQAN: /usr/include (found suitable version "1.4.2", minimum required is "1.4.0")
-- Found LIBSVM: /usr/lib/arm-linux-gnueabihf/libsvm.so (found suitable version "3.2.4", minimum required is "2.91")
-- Found COIN: /usr/include
-- Found GLPK: /usr/lib/arm-linux-gnueabihf/libglpk.so
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.11")
-- Found BZip2: /usr/lib/arm-linux-gnueabihf/libbz2.so (found version "1.0.8")
-- Looking for BZ2_bzCompressInit in /usr/lib/arm-linux-gnueabihf/libbz2.so
-- Looking for BZ2_bzCompressInit in /usr/lib/arm-linux-gnueabihf/libbz2.so - found
-- Found Eigen3: /usr/include/eigen3 (Required is at least version "3.3.4")
-- Found WM5: /usr/include/libwildmagic
CMake Warning (dev) at /usr/share/cmake-3.18/Modules/FindPackageHandleStandardArgs.cmake:273 (message):
The package name passed to `find_package_handle_standard_args` (SQLite)
does not match the name of the calling package (SQLITE). This can lead to
problems in calling code that expects `find_package` result variables
(e.g., `_FOUND`) to follow a certain pattern.
Call Stack (most recent call first):
cmake/modules/FindSQLITE.cmake:201 (find_package_handle_standard_args)
src/openms/cmake_findExternalLibs.cmake:134 (find_package)
src/openms/CMakeLists.txt:70 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Found SQLite: /usr/include (found version "3.34.1")
-- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so;/usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.6") found components: C CXX HL
-- Found Qt 5.15.2
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Info: CF_OPENMS_DATA_PATH:
-- Info: CF_OPENMS_DOC_PATH:
-- Check if the system is big endian
-- Searching 16 bit integer
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Searching 16 bit integer - Using unsigned short
-- Check if the system is big endian - little endian
-- Check size of unsigned char
-- Check size of unsigned char - done
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Check size of unsigned int
-- Check size of unsigned int - done
-- Check size of unsigned long
-- Check size of unsigned long - done
-- Check size of unsigned long long
-- Check size of unsigned long long - done
-- Check size of short
-- Check size of short - done
-- Check size of int
-- Check size of int - done
-- Check size of long
-- Check size of long - done
-- Check size of long long
-- Check size of long long - done
-- Check size of int32_t
-- Check size of int32_t - done
-- Check size of int64_t
-- Check size of int64_t - done
-- Check size of uint8_t
-- Check size of uint8_t - done
-- Check size of uint32_t
-- Check size of uint32_t - done
-- Check size of uint64_t
-- Check size of uint64_t - done
-- Looking for C++ include unistd.h
-- Looking for C++ include unistd.h - found
-- Looking for C++ include process.h
-- Looking for C++ include process.h - not found
-- Looking for C++ include time.h
-- Looking for C++ include time.h - found
-- Looking for C++ include sys/types.h
-- Looking for C++ include sys/types.h - found
-- Looking for C++ include sys/times.h
-- Looking for C++ include sys/times.h - found
-- Looking for C++ include sys/time.h
-- Looking for C++ include sys/time.h - found
-- Looking for C++ include stdint.h
-- Looking for C++ include stdint.h - found
-- Looking for kill
-- Looking for kill - found
-- Looking for sysconf
-- Looking for sysconf - found
-- Adding library OpenMS
-- Adding library OpenMS - SUCCESS
-- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.48.0")
-- Adding library SuperHirn
-- Adding library SuperHirn - SUCCESS
-- Adding library OpenMS_GUI
-- Adding library OpenMS_GUI - SUCCESS
-- No resource file (/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.rc) found for INIFileEditor. No icon will be embedded.
-- No resource file (/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.rc) found for TOPPAS. No icon will be embedded.
-- No resource file (/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.rc) found for TOPPView. No icon will be embedded.
-- Documentation is built (-D ENABLE_DOCS=On).
-- Found Doxygen: /usr/bin/doxygen (found version "1.9.1") found components: doxygen dot
-- Enabled tutorials (-D ENABLE_TUTORIALS=On).
--
-- -----------------------------------------------------------------
--
-- You have successfully configured OpenMS.
--
-- For a full list of make targets execute:
-- 'make targets'
--
-- -----------------------------------------------------------------
--
-- Configuring done
-- Generating done
-- Build files have been written to: /<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf
# Prepare the xpm-formatted pixmaps for the Debian menu system.
# Setting imagemagick to Build-Depends, for use of convert.
convert src/openms_gui/source/VISUAL/ICONS/TOPPAS.png -resize 32x32 debian/TOPPAS.xpm
convert src/openms_gui/source/VISUAL/ICONS/TOPPView.png -resize 32x32 debian/TOPPView.xpm
make[1]: Leaving directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1'
rm -f debian/libopenms-dev.debhelper.log debian/libopenms2.5.0.debhelper.log debian/topp.debhelper.log
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1'
# Build the libs and executable binaries
# Build the documentation, which needs a running XWindow server. We
# thus use the doc_minimal target.
#
# ATTENTION, as of 20200514, the pdfLatex compilation fails with error
# ! LaTeX Error: Command `\Bbbk' already defined.
# This is why we commented out the doc_tutorials target below.
# See also the override_dh_auto_configure target above, that disables
# that specific doc_tutorials target.
VERBOSE=1 \
dh_auto_build -- \
OpenMS GUI TOPP UTILS
cd obj-arm-linux-gnueabihf && make -j1 "INSTALL=install --strip-program=true" OpenMS GUI TOPP UTILS VERBOSE=1
make[2]: Entering directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<BUILDDIR>>/openms-2.5.0+cleaned1 -B/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
make -f CMakeFiles/Makefile2 OpenMS
make[3]: Entering directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<BUILDDIR>>/openms-2.5.0+cleaned1 -B/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/CMakeFiles 54
make -f CMakeFiles/Makefile2 src/openms/CMakeFiles/OpenMS.dir/all
make[4]: Entering directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf'
make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend
make[5]: Entering directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/openms-2.5.0+cleaned1 /<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo /<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf /<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo /<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake --color=
Dependee "/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake" is newer than depender "/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend.internal".
Dependee "/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend.internal".
Scanning dependencies of target OpenSwathAlgo
make[5]: Leaving directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf'
make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build
make[5]: Entering directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf'
[ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o
cd /<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/include -I/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/include -I/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/openms-2.5.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o -c /<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp
In file included from /usr/include/c++/10/vector:72,
from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
from /usr/include/boost/math/special_functions/fpclassify.hpp:19,
from /<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:38,
from /<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp:35:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
from /usr/include/boost/math/special_functions/fpclassify.hpp:19,
from /<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:38,
from /<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp:35:
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void OpenSwath::MRMScoring::calcLibraryScore(OpenSwath::IMRMFeature*, const std::vector<OpenSwath::LightTransition>&, double&, double&, double&, double&, double&, double&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function 'double OpenSwath::MRMScoring::calcMIScore()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function 'double OpenSwath::MRMScoring::calcMIPrecursorScore()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function 'double OpenSwath::MRMScoring::calcMIPrecursorContrastScore()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function 'double OpenSwath::MRMScoring::calcMIPrecursorCombinedScore()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function 'double OpenSwath::MRMScoring::calcXcorrShapeScore()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function 'double OpenSwath::MRMScoring::calcXcorrPrecursorShapeScore()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function 'double OpenSwath::MRMScoring::calcXcorrPrecursorCombinedShapeScore()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function 'double OpenSwath::MRMScoring::calcXcorrPrecursorContrastShapeScore()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function 'double OpenSwath::MRMScoring::calcXcorrContrastShapeScore()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o
cd /<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/include -I/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf/src/openswathalgo/include -I/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/openms-2.5.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -c /<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp
In file included from /<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp:42:
/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c: In function 'void* checkedCalloc(size_t, size_t)':
/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c:29:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
29 | fprintf(stderr, "Error: %s\nAttempted to allocate %lu length of size %lu\n", strerror(errno), vectorLength, sizeOfType);
| ~~^ ~~~~~~~~~~~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c:29:80: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
29 | fprintf(stderr, "Error: %s\nAttempted to allocate %lu length of size %lu\n", strerror(errno), vectorLength, sizeOfType);
| ~~^ ~~~~~~~~~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp: In function 'std::vector<unsigned int> OpenSwath::Scoring::computeRank(const std::vector<double>&)':
/<<BUILDDIR>>/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp:268:12: error: 'sort' is not a member of 'std'; did you mean 'sqrt'?
268 | std::sort(v_sort.begin(), v_sort.end());
| ^~~~
| sqrt
make[5]: *** [src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make:98: src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o] Error 1
make[5]: Leaving directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf'
make[4]: *** [CMakeFiles/Makefile2:1696: src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/all] Error 2
make[4]: Leaving directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf'
make[3]: *** [CMakeFiles/Makefile2:1731: src/openms/CMakeFiles/OpenMS.dir/rule] Error 2
make[3]: Leaving directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf'
make[2]: *** [Makefile:587: OpenMS] Error 2
make[2]: Leaving directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1/obj-arm-linux-gnueabihf'
dh_auto_build: error: cd obj-arm-linux-gnueabihf && make -j1 "INSTALL=install --strip-program=true" OpenMS GUI TOPP UTILS VERBOSE=1 returned exit code 2
make[1]: *** [debian/rules:94: override_dh_auto_build] Error 25
make[1]: Leaving directory '/<<BUILDDIR>>/openms-2.5.0+cleaned1'
make: *** [debian/rules:43: build-arch] Error 2
dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2021-01-27T17:11:22Z
Finished
--------
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 0
Build-Time: 159
Distribution: bullseye-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 3079
Job: openms_2.5.0+cleaned1-5
Machine Architecture: armhf
Package: openms
Package-Time: 3397
Source-Version: 2.5.0+cleaned1-5
Space: 0
Status: failed
Version: 2.5.0+cleaned1-5
--------------------------------------------------------------------------------
Finished at 2021-01-27T17:11:22Z
Build needed 00:00:00, 0k disc space