Build log for openms (1.11.1-5+b1) on armhf

openms → 1.11.1-5+b1 → armhf → 2015-10-17 13:38:22

sbuild (Debian sbuild) 0.65.2 (24 Mar 2015) on bm-wb-03

╔══════════════════════════════════════════════════════════════════════════════╗
║ openms 1.11.1-5+b1 (armhf)                                 17 Oct 2015 09:34 ║
╚══════════════════════════════════════════════════════════════════════════════╝

Package: openms
Version: 1.11.1-5+b1
Source Version: 1.11.1-5
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'build/openms-RZHL2r/openms-1.11.1' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/openms-RZHL2r' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-81ea3d63-f537-4f9c-928d-1a926fb16e0f' with '«CHROOT»'

┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot                                                                │
└──────────────────────────────────────────────────────────────────────────────┘

Get:1 http://172.17.0.1 stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1 stretch-staging/main Sources [8363 kB]
Get:3 http://172.17.0.1 stretch-staging/main armhf Packages [10.3 MB]
Ign http://172.17.0.1 stretch-staging/main Translation-en
Fetched 18.6 MB in 38s (483 kB/s)
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files                                                           │
└──────────────────────────────────────────────────────────────────────────────┘


Check APT
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Checking available source versions...

Download source files with APT
──────────────────────────────

Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'openms' packaging is maintained in the 'Git' version control system at:
git://anonscm.debian.org/debichem/packages/openms.git
Need to get 112 MB of source archives.
Get:1 http://172.17.0.1/private/ stretch-staging/main openms 1.11.1-5 (dsc) [2824 B]
Get:2 http://172.17.0.1/private/ stretch-staging/main openms 1.11.1-5 (tar) [112 MB]
Get:3 http://172.17.0.1/private/ stretch-staging/main openms 1.11.1-5 (diff) [76.2 kB]
Fetched 112 MB in 28s (3957 kB/s)
Download complete and in download only mode

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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/«BUILDDIR»/resolver-O6w0k9/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Ign file: ./ InRelease
Get:1 file: ./ Release.gpg [299 B]
Get:2 file: ./ Release [2119 B]
Ign file: ./ Translation-en
Reading package lists...
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver)                         │
└──────────────────────────────────────────────────────────────────────────────┘

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 1 newly installed, 0 to remove and 14 not upgraded.
Need to get 0 B/764 B of archives.
After this operation, 0 B of additional disk space will be used.
Selecting previously unselected package sbuild-build-depends-core-dummy.
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(Reading database ... 12922 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 7.0.50~), dpkg-dev (>= 1.16.1~), cmake (>= 2.6.3), libxerces-c-dev (>= 3.1.1), libgsl0-dev (>= 1.15+dfsg), libboost-dev (>= 1.54.0), libboost-iostreams-dev (>= 1.54.0), libboost-date-time-dev (>= 1.54.0), libboost-math-dev (>= 1.54.0), seqan-dev (>= 1.4.1), libsvm-dev (>= 3.12), libglpk-dev (>= 4.52.1), zlib1g-dev (>= 1.2.7), libbz2-dev (>= 1.0.6), cppcheck (>= 1.54), libqt4-dev (>= 4.8.2), libqt4-opengl-dev (>= 4.8.2), libqtwebkit-dev (>= 2.2.1), coinor-libcoinutils-dev (>= 2.6.4), imagemagick, doxygen (>= 1.8.1.2), graphviz, texlive-extra-utils, texlive-latex-extra, latex-xcolor, texlive-font-utils, ghostscript, texlive-fonts-recommended
Filtered Build-Depends: libc6-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 7.0.50~), dpkg-dev (>= 1.16.1~), cmake (>= 2.6.3), libxerces-c-dev (>= 3.1.1), libgsl0-dev (>= 1.15+dfsg), libboost-dev (>= 1.54.0), libboost-iostreams-dev (>= 1.54.0), libboost-date-time-dev (>= 1.54.0), libboost-math-dev (>= 1.54.0), seqan-dev (>= 1.4.1), libsvm-dev (>= 3.12), libglpk-dev (>= 4.52.1), zlib1g-dev (>= 1.2.7), libbz2-dev (>= 1.0.6), cppcheck (>= 1.54), libqt4-dev (>= 4.8.2), libqt4-opengl-dev (>= 4.8.2), libqtwebkit-dev (>= 2.2.1), coinor-libcoinutils-dev (>= 2.6.4), imagemagick, doxygen (>= 1.8.1.2), graphviz, texlive-extra-utils, texlive-latex-extra, latex-xcolor, texlive-font-utils, ghostscript, texlive-fonts-recommended
dpkg-deb: building package 'sbuild-build-depends-openms-dummy' in '/«BUILDDIR»/resolver-qMAVu3/apt_archive/sbuild-build-depends-openms-dummy.deb'.
OK
Ign file: ./ InRelease
Get:1 file: ./ Release.gpg [299 B]
Get:2 file: ./ Release [2119 B]
Ign file: ./ Translation-en
Reading package lists...
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Install openms build dependencies (apt-based resolver)                       │
└──────────────────────────────────────────────────────────────────────────────┘

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
  bsdmainutils cmake cmake-data coinor-libcoinutils-dev coinor-libcoinutils3v5
  cpp-5 cppcheck debhelper dh-strip-nondeterminism doxygen file fontconfig
  fontconfig-config fonts-dejavu-core g++-5 gcc-5 gcc-5-base gettext
  gettext-base ghostscript graphviz groff-base gsfonts hicolor-icon-theme
  icu-devtools imagemagick imagemagick-6.q16 imagemagick-common
  intltool-debian iso-codes libamd2.3.1 libarchive-zip-perl libarchive13
  libasan2 libatomic1 libaudio2 libavahi-client3 libavahi-common-data
  libavahi-common3 libblas-common libblas-dev libblas3 libboost-date-time-dev
  libboost-date-time1.58-dev libboost-date-time1.58.0 libboost-dev
  libboost-iostreams-dev libboost-iostreams1.58-dev libboost-iostreams1.58.0
  libboost-math-dev libboost-math1.58-dev libboost-math1.58.0
  libboost-regex1.58-dev libboost-regex1.58.0 libboost-serialization1.58-dev
  libboost-serialization1.58.0 libboost1.58-dev libbsd0 libbtf1.2.0 libbz2-dev
  libcairo2 libcamd2.3.1 libcc1-0 libccolamd2.8.0 libcdt5 libcgraph6
  libcholmod2.1.2 libclang1-3.5 libcolamd2.8.0 libcroco3 libcsparse3.1.2
  libcups2 libcupsfilters1 libcupsimage2 libcurl3 libcxsparse3.1.2 libdatrie1
  libdrm-amdgpu1 libdrm-dev libdrm-exynos1 libdrm-freedreno1 libdrm-nouveau2
  libdrm-omap1 libdrm-radeon1 libdrm-tegra0 libedit2 libexpat1 libffi6
  libfftw3-double3 libfile-stripnondeterminism-perl libfontconfig1
  libfreetype6 libgcc-5-dev libgcc1 libgd3 libgfortran3 libgl1-mesa-dev
  libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglpk-dev libglpk36
  libglu1-mesa libglu1-mesa-dev libgmp-dev libgmpxx4ldbl libgnutls-deb0-28
  libgomp1 libgraphite2-3 libgs9 libgs9-common libgsl0-dev libgsl0ldbl
  libgssapi-krb5-2 libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgvc6
  libgvpr2 libharfbuzz-icu0 libharfbuzz0b libhogweed4 libice6 libicu-dev
  libicu55 libidn11 libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo libjpeg8
  libjsoncpp0v5 libk5crypto3 libkeyutils1 libklu1.2.1 libkpathsea6 libkrb5-3
  libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2
  libldl2.1.0 libllvm3.5v5 liblqr-1-0 libltdl7 liblzo2-2 libmagic1
  libmagickcore-6.q16-2 libmagickwand-6.q16-2 libmng1 libnettle6 libnghttp2-14
  libobjc-5-dev libobjc4 libopenjpeg5 liborc-0.4-0 libp11-kit0 libpango-1.0-0
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4
  libpipeline1 libpixman-1-0 libpoppler46 libpotrace0 libptexenc1
  libpthread-stubs0-dev libpython-stdlib libpython2.7-minimal
  libpython2.7-stdlib libqt4-dbus libqt4-declarative libqt4-designer
  libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-opengl
  libqt4-opengl-dev libqt4-qt3support libqt4-script libqt4-scripttools
  libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4
  libqtdbus4 libqtgui4 libqtwebkit-dev libqtwebkit4 librtmp1 libsasl2-2
  libsasl2-modules-db libsm6 libspqr1.3.1 libsqlite3-0 libssh2-1 libssl1.0.0
  libstdc++-5-dev libstdc++6 libsuitesparse-dev libsvm-dev libsvm3 libsynctex1
  libtasn1-6 libtexlua52 libtexluajit2 libthai-data libthai0 libtiff5
  libtinyxml2-2 libtrio2 libubsan0 libumfpack5.6.2 libunistring0 libvpx2
  libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libxapian22v5
  libxau-dev libxau6 libxaw7 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0
  libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev libxcb-present-dev
  libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render0
  libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev libxcb-shm0
  libxcb-sync-dev libxcb-sync1 libxcb-xfixes0 libxcb-xfixes0-dev libxcb1
  libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxdot4
  libxerces-c-dev libxerces-c3.1 libxext-dev libxext6 libxfixes-dev libxfixes3
  libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxshmfence-dev libxshmfence1
  libxt6 libxxf86vm-dev libxxf86vm1 libzzip-0-13 man-db mesa-common-dev
  mime-support po-debconf poppler-data preview-latex-style python
  python-minimal python-pygments python2.7 python2.7-minimal qdbus
  qt4-linguist-tools qt4-qmake qtchooser qtcore4-l10n seqan-dev t1utils
  tex-common texlive-base texlive-binaries texlive-extra-utils
  texlive-font-utils texlive-fonts-recommended texlive-latex-base
  texlive-latex-extra texlive-latex-recommended texlive-pictures ucf
  x11-common x11proto-core-dev x11proto-damage-dev x11proto-dri2-dev
  x11proto-fixes-dev x11proto-gl-dev x11proto-input-dev x11proto-kb-dev
  x11proto-xext-dev x11proto-xf86vidmode-dev xdg-utils xorg-sgml-doctools
  xtrans-dev zlib1g-dev
Suggested packages:
  wamerican wordlist whois vacation codeblocks eclipse ninja-build
  gcc-5-locales dh-make doxygen-latex doxygen-doc doxygen-gui gcc-5-doc
  libstdc++6-5-dbg libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg
  libasan2-dbg liblsan0-dbg libtsan0-dbg libubsan0-dbg libcilkrts5-dbg
  libmpx0-dbg libquadmath-dbg gettext-doc autopoint libasprintf-dev
  libgettextpo-dev ghostscript-x graphviz-doc groff imagemagick-doc autotrace
  cups-bsd lpr lprng enscript ffmpeg gimp gnuplot grads hp2xx html2ps
  libwmf-bin mplayer povray radiance sane-utils texlive-base-bin transfig
  ufraw-batch isoquery lrzip nas libboost-doc libboost1.58-doc
  libboost-atomic1.58-dev libboost-chrono1.58-dev libboost-context1.58-dev
  libboost-coroutine1.58-dev libboost-exception1.58-dev
  libboost-filesystem1.58-dev libboost-graph1.58-dev
  libboost-graph-parallel1.58-dev libboost-locale1.58-dev libboost-log1.58-dev
  libboost-mpi1.58-dev libboost-mpi-python1.58-dev
  libboost-program-options1.58-dev libboost-python1.58-dev
  libboost-random1.58-dev libboost-signals1.58-dev libboost-system1.58-dev
  libboost-test1.58-dev libboost-thread1.58-dev libboost-timer1.58-dev
  libboost-wave1.58-dev libboost1.58-tools-dev libmpfrc++-dev libntl-dev
  cups-common libfftw3-bin libfftw3-dev libgd-tools libiodbc2-dev
  libmysqlclient-dev gmp-doc libgmp10-doc libmpfr-dev gnutls-bin gsl-ref-psdoc
  gsl-doc-pdf gsl-doc-info gsl-ref-html krb5-doc krb5-user
  libvisual-0.4-plugins gstreamer1.0-tools icu-doc liblcms2-utils
  libqt4-declarative-folderlistmodel libqt4-declarative-gestures
  libqt4-declarative-particles libqt4-declarative-shaders qt4-qmlviewer
  firebird-dev libpq-dev libsqlite0-dev libsqlite3-dev qt4-dev-tools qt4-doc
  unixodbc-dev libicu52 qt4-qtconfig libstdc++-5-doc xapian-tools libxcb-doc
  libxerces-c-doc libxext-doc less www-browser libmail-box-perl poppler-utils
  fonts-japanese-mincho fonts-ipafont-mincho fonts-japanese-gothic
  fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum
  python-doc python-tk ttf-bitstream-vera python2.7-doc binfmt-support gv
  postscript-viewer perl-tk xpdf-reader pdf-viewer xindy dvipng latexmk
  purifyeps latexdiff fragmaster lacheck chktex dvidvi psutils
  libfile-which-perl libspreadsheet-parseexcel-perl texlive-pstricks
  libtcltk-ruby dot2tex gvfs-bin
Recommended packages:
  curl wget lynx-cur fonts-liberation libmagickcore-6.q16-2-extra netpbm
  bzip2-doc ca-certificates libgl1-mesa-dri libglib2.0-data shared-mime-info
  xdg-user-dirs fonts-droid gstreamer1.0-plugins-base krb5-locales
  libqt4-sql-mysql libqt4-sql-odbc libqt4-sql-psql libqt4-sql-sqlite
  libqt4-sql-sqlite2 libsasl2-modules libx11-doc xml-core
  libmail-sendmail-perl python-chardet python-pkg-resources lmodern ruby wish
  libfile-homedir-perl libyaml-tiny-perl ps2eps texlive-fonts-recommended-doc
  tipa tex-gyre texlive-latex-base-doc texlive-latex-extra-doc prosper
  texlive-latex-recommended-doc texlive-pictures-doc prerex
  libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
  x11-xserver-utils
The following NEW packages will be installed:
  bsdmainutils cmake cmake-data coinor-libcoinutils-dev coinor-libcoinutils3v5
  cppcheck debhelper dh-strip-nondeterminism doxygen file fontconfig
  fontconfig-config fonts-dejavu-core gettext gettext-base ghostscript
  graphviz groff-base gsfonts hicolor-icon-theme icu-devtools imagemagick
  imagemagick-6.q16 imagemagick-common intltool-debian iso-codes libamd2.3.1
  libarchive-zip-perl libarchive13 libaudio2 libavahi-client3
  libavahi-common-data libavahi-common3 libblas-common libblas-dev libblas3
  libboost-date-time-dev libboost-date-time1.58-dev libboost-date-time1.58.0
  libboost-dev libboost-iostreams-dev libboost-iostreams1.58-dev
  libboost-iostreams1.58.0 libboost-math-dev libboost-math1.58-dev
  libboost-math1.58.0 libboost-regex1.58-dev libboost-regex1.58.0
  libboost-serialization1.58-dev libboost-serialization1.58.0 libboost1.58-dev
  libbsd0 libbtf1.2.0 libbz2-dev libcairo2 libcamd2.3.1 libccolamd2.8.0
  libcdt5 libcgraph6 libcholmod2.1.2 libclang1-3.5 libcolamd2.8.0 libcroco3
  libcsparse3.1.2 libcups2 libcupsfilters1 libcupsimage2 libcurl3
  libcxsparse3.1.2 libdatrie1 libdrm-amdgpu1 libdrm-dev libdrm-exynos1
  libdrm-freedreno1 libdrm-nouveau2 libdrm-omap1 libdrm-radeon1 libdrm-tegra0
  libedit2 libexpat1 libffi6 libfftw3-double3 libfile-stripnondeterminism-perl
  libfontconfig1 libfreetype6 libgd3 libgfortran3 libgl1-mesa-dev
  libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglpk-dev libglpk36
  libglu1-mesa libglu1-mesa-dev libgmp-dev libgmpxx4ldbl libgnutls-deb0-28
  libgraphite2-3 libgs9 libgs9-common libgsl0-dev libgsl0ldbl libgssapi-krb5-2
  libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgvc6 libgvpr2
  libharfbuzz-icu0 libharfbuzz0b libhogweed4 libice6 libicu-dev libicu55
  libidn11 libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo libjpeg8
  libjsoncpp0v5 libk5crypto3 libkeyutils1 libklu1.2.1 libkpathsea6 libkrb5-3
  libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2
  libldl2.1.0 libllvm3.5v5 liblqr-1-0 libltdl7 liblzo2-2 libmagic1
  libmagickcore-6.q16-2 libmagickwand-6.q16-2 libmng1 libnettle6 libnghttp2-14
  libobjc-5-dev libobjc4 libopenjpeg5 liborc-0.4-0 libp11-kit0 libpango-1.0-0
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4
  libpipeline1 libpixman-1-0 libpoppler46 libpotrace0 libptexenc1
  libpthread-stubs0-dev libpython-stdlib libpython2.7-minimal
  libpython2.7-stdlib libqt4-dbus libqt4-declarative libqt4-designer
  libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-opengl
  libqt4-opengl-dev libqt4-qt3support libqt4-script libqt4-scripttools
  libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4
  libqtdbus4 libqtgui4 libqtwebkit-dev libqtwebkit4 librtmp1 libsasl2-2
  libsasl2-modules-db libsm6 libspqr1.3.1 libsqlite3-0 libssh2-1 libssl1.0.0
  libsuitesparse-dev libsvm-dev libsvm3 libsynctex1 libtasn1-6 libtexlua52
  libtexluajit2 libthai-data libthai0 libtiff5 libtinyxml2-2 libtrio2
  libumfpack5.6.2 libunistring0 libvpx2 libx11-6 libx11-data libx11-dev
  libx11-xcb-dev libx11-xcb1 libxapian22v5 libxau-dev libxau6 libxaw7
  libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0
  libxcb-glx0-dev libxcb-present-dev libxcb-present0 libxcb-randr0
  libxcb-randr0-dev libxcb-render0 libxcb-render0-dev libxcb-shape0
  libxcb-shape0-dev libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-xfixes0
  libxcb-xfixes0-dev libxcb1 libxcb1-dev libxdamage-dev libxdamage1
  libxdmcp-dev libxdmcp6 libxdot4 libxerces-c-dev libxerces-c3.1 libxext-dev
  libxext6 libxfixes-dev libxfixes3 libxi6 libxml2 libxmu6 libxpm4 libxrender1
  libxshmfence-dev libxshmfence1 libxt6 libxxf86vm-dev libxxf86vm1
  libzzip-0-13 man-db mesa-common-dev mime-support po-debconf poppler-data
  preview-latex-style python python-minimal python-pygments python2.7
  python2.7-minimal qdbus qt4-linguist-tools qt4-qmake qtchooser qtcore4-l10n
  sbuild-build-depends-openms-dummy seqan-dev t1utils tex-common texlive-base
  texlive-binaries texlive-extra-utils texlive-font-utils
  texlive-fonts-recommended texlive-latex-base texlive-latex-extra
  texlive-latex-recommended texlive-pictures ucf x11-common x11proto-core-dev
  x11proto-damage-dev x11proto-dri2-dev x11proto-fixes-dev x11proto-gl-dev
  x11proto-input-dev x11proto-kb-dev x11proto-xext-dev
  x11proto-xf86vidmode-dev xdg-utils xorg-sgml-doctools xtrans-dev zlib1g-dev
The following packages will be upgraded:
  cpp-5 g++-5 gcc-5 gcc-5-base libasan2 libatomic1 libcc1-0 libgcc-5-dev
  libgcc1 libgomp1 libstdc++-5-dev libstdc++6 libubsan0
13 upgraded, 303 newly installed, 0 to remove and 1 not upgraded.
Need to get 282 MB/282 MB of archives.
After this operation, 864 MB of additional disk space will be used.
Get:1 http://172.17.0.1/private/ stretch-staging/main libgomp1 armhf 5.2.1-22+rpi1 [47.3 kB]
Get:2 http://172.17.0.1/private/ stretch-staging/main libatomic1 armhf 5.2.1-22+rpi1 [6592 B]
Get:3 http://172.17.0.1/private/ stretch-staging/main gcc-5-base armhf 5.2.1-22+rpi1 [167 kB]
Get:4 http://172.17.0.1/private/ stretch-staging/main libgcc1 armhf 1:5.2.1-22+rpi1 [38.5 kB]
Get:5 http://172.17.0.1/private/ stretch-staging/main libasan2 armhf 5.2.1-22+rpi1 [227 kB]
Get:6 http://172.17.0.1/private/ stretch-staging/main libubsan0 armhf 5.2.1-22+rpi1 [84.2 kB]
Get:7 http://172.17.0.1/private/ stretch-staging/main cpp-5 armhf 5.2.1-22+rpi1 [22.9 MB]
Get:8 http://172.17.0.1/private/ stretch-staging/main libcc1-0 armhf 5.2.1-22+rpi1 [24.7 kB]
Get:9 http://172.17.0.1/private/ stretch-staging/main g++-5 armhf 5.2.1-22+rpi1 [32.0 MB]
Get:10 http://172.17.0.1/private/ stretch-staging/main gcc-5 armhf 5.2.1-22+rpi1 [22.9 MB]
Get:11 http://172.17.0.1/private/ stretch-staging/main libgcc-5-dev armhf 5.2.1-22+rpi1 [450 kB]
Get:12 http://172.17.0.1/private/ stretch-staging/main libstdc++-5-dev armhf 5.2.1-22+rpi1 [1428 kB]
Get:13 http://172.17.0.1/private/ stretch-staging/main libstdc++6 armhf 5.2.1-22+rpi1 [328 kB]
Get:14 http://172.17.0.1/private/ stretch-staging/main groff-base armhf 1.22.3-1 [1085 kB]
Get:15 http://172.17.0.1/private/ stretch-staging/main bsdmainutils armhf 9.0.6 [177 kB]
Get:16 http://172.17.0.1/private/ stretch-staging/main libpipeline1 armhf 1.4.1-1 [23.9 kB]
Get:17 http://172.17.0.1/private/ stretch-staging/main man-db armhf 2.7.4-1 [974 kB]
Get:18 http://172.17.0.1/private/ stretch-staging/main libbsd0 armhf 0.7.0-2 [63.7 kB]
Get:19 http://172.17.0.1/private/ stretch-staging/main libedit2 armhf 3.1-20150325-1 [70.7 kB]
Get:20 http://172.17.0.1/private/ stretch-staging/main libpython2.7-minimal armhf 2.7.10-5 [380 kB]
Get:21 http://172.17.0.1/private/ stretch-staging/main python2.7-minimal armhf 2.7.10-5 [1095 kB]
Get:22 http://172.17.0.1/private/ stretch-staging/main python-minimal armhf 2.7.9-1 [40.1 kB]
Get:23 http://172.17.0.1/private/ stretch-staging/main mime-support all 3.59 [36.4 kB]
Get:24 http://172.17.0.1/private/ stretch-staging/main libexpat1 armhf 2.1.0-7 [59.8 kB]
Get:25 http://172.17.0.1/private/ stretch-staging/main libffi6 armhf 3.2.1-3 [18.5 kB]
Get:26 http://172.17.0.1/private/ stretch-staging/main libsqlite3-0 armhf 3.8.11.1-1 [391 kB]
Get:27 http://172.17.0.1/private/ stretch-staging/main libssl1.0.0 armhf 1.0.2d-1 [882 kB]
Get:28 http://172.17.0.1/private/ stretch-staging/main libpython2.7-stdlib armhf 2.7.10-5 [1813 kB]
Get:29 http://172.17.0.1/private/ stretch-staging/main python2.7 armhf 2.7.10-5 [265 kB]
Get:30 http://172.17.0.1/private/ stretch-staging/main libpython-stdlib armhf 2.7.9-1 [19.6 kB]
Get:31 http://172.17.0.1/private/ stretch-staging/main python armhf 2.7.9-1 [151 kB]
Get:32 http://172.17.0.1/private/ stretch-staging/main cmake-data all 3.3.2-1 [1082 kB]
Get:33 http://172.17.0.1/private/ stretch-staging/main liblzo2-2 armhf 2.08-1.2 [47.6 kB]
Get:34 http://172.17.0.1/private/ stretch-staging/main libnettle6 armhf 3.1.1-4 [200 kB]
Get:35 http://172.17.0.1/private/ stretch-staging/main libicu55 armhf 55.1-5 [7378 kB]
Get:36 http://172.17.0.1/private/ stretch-staging/main libxml2 armhf 2.9.2+zdfsg1-4 [797 kB]
Get:37 http://172.17.0.1/private/ stretch-staging/main libarchive13 armhf 3.1.2-11+b1 [230 kB]
Get:38 http://172.17.0.1/private/ stretch-staging/main libkeyutils1 armhf 1.5.9-8 [11.5 kB]
Get:39 http://172.17.0.1/private/ stretch-staging/main libkrb5support0 armhf 1.13.2+dfsg-2 [55.9 kB]
Get:40 http://172.17.0.1/private/ stretch-staging/main libk5crypto3 armhf 1.13.2+dfsg-2 [109 kB]
Get:41 http://172.17.0.1/private/ stretch-staging/main libkrb5-3 armhf 1.13.2+dfsg-2 [260 kB]
Get:42 http://172.17.0.1/private/ stretch-staging/main libgssapi-krb5-2 armhf 1.13.2+dfsg-2 [130 kB]
Get:43 http://172.17.0.1/private/ stretch-staging/main libidn11 armhf 1.32-3 [110 kB]
Get:44 http://172.17.0.1/private/ stretch-staging/main libhogweed4 armhf 3.1.1-4 [126 kB]
Get:45 http://172.17.0.1/private/ stretch-staging/main libp11-kit0 armhf 0.23.1-3 [94.2 kB]
Get:46 http://172.17.0.1/private/ stretch-staging/main libtasn1-6 armhf 4.7-2 [44.3 kB]
Get:47 http://172.17.0.1/private/ stretch-staging/main libgnutls-deb0-28 armhf 3.3.18-1 [645 kB]
Get:48 http://172.17.0.1/private/ stretch-staging/main libsasl2-modules-db armhf 2.1.26.dfsg1-14 [65.5 kB]
Get:49 http://172.17.0.1/private/ stretch-staging/main libsasl2-2 armhf 2.1.26.dfsg1-14 [96.8 kB]
Get:50 http://172.17.0.1/private/ stretch-staging/main libldap-2.4-2 armhf 2.4.42+dfsg-2+rpi1 [197 kB]
Get:51 http://172.17.0.1/private/ stretch-staging/main libnghttp2-14 armhf 1.3.2-0.1 [65.6 kB]
Get:52 http://172.17.0.1/private/ stretch-staging/main librtmp1 armhf 2.4+20150115.gita107cef-1+b1 [54.5 kB]
Get:53 http://172.17.0.1/private/ stretch-staging/main libssh2-1 armhf 1.5.0-2 [122 kB]
Get:54 http://172.17.0.1/private/ stretch-staging/main libcurl3 armhf 7.45.0-1 [242 kB]
Get:55 http://172.17.0.1/private/ stretch-staging/main libjsoncpp0v5 armhf 0.10.5-1 [66.2 kB]
Get:56 http://172.17.0.1/private/ stretch-staging/main cmake armhf 3.3.2-1 [2128 kB]
Get:57 http://172.17.0.1/private/ stretch-staging/main libfreetype6 armhf 2.6-2 [397 kB]
Get:58 http://172.17.0.1/private/ stretch-staging/main ucf all 3.0030 [69.7 kB]
Get:59 http://172.17.0.1/private/ stretch-staging/main fonts-dejavu-core all 2.35-1 [1064 kB]
Get:60 http://172.17.0.1/private/ stretch-staging/main fontconfig-config all 2.11.0-6.3 [273 kB]
Get:61 http://172.17.0.1/private/ stretch-staging/main libfontconfig1 armhf 2.11.0-6.3 [311 kB]
Get:62 http://172.17.0.1/private/ stretch-staging/main fontconfig armhf 2.11.0-6.3 [402 kB]
Get:63 http://172.17.0.1/private/ stretch-staging/main imagemagick-common all 8:6.8.9.9-6 [149 kB]
Get:64 http://172.17.0.1/private/ stretch-staging/main libamd2.3.1 armhf 1:4.2.1-3 [22.6 kB]
Get:65 http://172.17.0.1/private/ stretch-staging/main libxau6 armhf 1:1.0.8-1 [19.9 kB]
Get:66 http://172.17.0.1/private/ stretch-staging/main x11-common all 1:7.7+9 [287 kB]
Get:67 http://172.17.0.1/private/ stretch-staging/main libice6 armhf 2:1.0.9-1+b1 [51.9 kB]
Get:68 http://172.17.0.1/private/ stretch-staging/main libsm6 armhf 2:1.2.2-1+b1 [31.2 kB]
Get:69 http://172.17.0.1/private/ stretch-staging/main libxdmcp6 armhf 1:1.1.2-1 [25.0 kB]
Get:70 http://172.17.0.1/private/ stretch-staging/main libxcb1 armhf 1.10-3+b1 [40.6 kB]
Get:71 http://172.17.0.1/private/ stretch-staging/main libx11-data all 2:1.6.3-1 [128 kB]
Get:72 http://172.17.0.1/private/ stretch-staging/main libx11-6 armhf 2:1.6.3-1 [678 kB]
Get:73 http://172.17.0.1/private/ stretch-staging/main libxt6 armhf 1:1.1.4-1+b1 [154 kB]
Get:74 http://172.17.0.1/private/ stretch-staging/main libaudio2 armhf 1.9.4-3 [73.0 kB]
Get:75 http://172.17.0.1/private/ stretch-staging/main libavahi-common-data armhf 0.6.31-5 [98.8 kB]
Get:76 http://172.17.0.1/private/ stretch-staging/main libavahi-common3 armhf 0.6.31-5 [48.0 kB]
Get:77 http://172.17.0.1/private/ stretch-staging/main libavahi-client3 armhf 0.6.31-5 [50.6 kB]
Get:78 http://172.17.0.1/private/ stretch-staging/main libbtf1.2.0 armhf 1:4.2.1-3 [12.1 kB]
Get:79 http://172.17.0.1/private/ stretch-staging/main libcamd2.3.1 armhf 1:4.2.1-3 [20.4 kB]
Get:80 http://172.17.0.1/private/ stretch-staging/main libccolamd2.8.0 armhf 1:4.2.1-3 [21.5 kB]
Get:81 http://172.17.0.1/private/ stretch-staging/main libgfortran3 armhf 5.2.1-22+rpi1 [154 kB]
Get:82 http://172.17.0.1/private/ stretch-staging/main libblas-common armhf 1.2.20110419-10 [8494 B]
Get:83 http://172.17.0.1/private/ stretch-staging/main libblas3 armhf 1.2.20110419-10 [120 kB]
Get:84 http://172.17.0.1/private/ stretch-staging/main libcolamd2.8.0 armhf 1:4.2.1-3 [17.8 kB]
Get:85 http://172.17.0.1/private/ stretch-staging/main liblapack3 armhf 3.5.0-4 [1316 kB]
Get:86 http://172.17.0.1/private/ stretch-staging/main libcholmod2.1.2 armhf 1:4.2.1-3 [364 kB]
Get:87 http://172.17.0.1/private/ stretch-staging/main libglib2.0-0 armhf 2.46.0-2 [2376 kB]
Get:88 http://172.17.0.1/private/ stretch-staging/main libcroco3 armhf 0.6.8-3 [121 kB]
Get:89 http://172.17.0.1/private/ stretch-staging/main libcsparse3.1.2 armhf 1:4.2.1-3 [30.1 kB]
Get:90 http://172.17.0.1/private/ stretch-staging/main libcxsparse3.1.2 armhf 1:4.2.1-3 [48.8 kB]
Get:91 http://172.17.0.1/private/ stretch-staging/main libfftw3-double3 armhf 3.3.4-2+rpi1 [434 kB]
Get:92 http://172.17.0.1/private/ stretch-staging/main libjbig0 armhf 2.1-3.1 [27.5 kB]
Get:93 http://172.17.0.1/private/ stretch-staging/main libjpeg8 armhf 8d1-2 [108 kB]
Get:94 http://172.17.0.1/private/ stretch-staging/main libklu1.2.1 armhf 1:4.2.1-3 [81.5 kB]
Get:95 http://172.17.0.1/private/ stretch-staging/main liblcms2-2 armhf 2.6-3 [113 kB]
Get:96 http://172.17.0.1/private/ stretch-staging/main libldl2.1.0 armhf 1:4.2.1-3 [12.0 kB]
Get:97 http://172.17.0.1/private/ stretch-staging/main liblqr-1-0 armhf 0.4.2-2 [20.9 kB]
Get:98 http://172.17.0.1/private/ stretch-staging/main libltdl7 armhf 2.4.2-1.11 [42.5 kB]
Get:99 http://172.17.0.1/private/ stretch-staging/main libjpeg62-turbo armhf 1:1.4.1-2 [103 kB]
Get:100 http://172.17.0.1/private/ stretch-staging/main libtiff5 armhf 4.0.5-1 [200 kB]
Get:101 http://172.17.0.1/private/ stretch-staging/main libxext6 armhf 2:1.3.3-1 [48.1 kB]
Get:102 http://172.17.0.1/private/ stretch-staging/main libmagickcore-6.q16-2 armhf 8:6.8.9.9-6 [1516 kB]
Get:103 http://172.17.0.1/private/ stretch-staging/main libmagickwand-6.q16-2 armhf 8:6.8.9.9-6 [378 kB]
Get:104 http://172.17.0.1/private/ stretch-staging/main libmng1 armhf 1.0.10+dfsg-3.1 [164 kB]
Get:105 http://172.17.0.1/private/ stretch-staging/main libpaper1 armhf 1.1.24+nmu4 [21.4 kB]
Get:106 http://172.17.0.1/private/ stretch-staging/main libspqr1.3.1 armhf 1:4.2.1-3 [73.6 kB]
Get:107 http://172.17.0.1/private/ stretch-staging/main libumfpack5.6.2 armhf 1:4.2.1-3 [314 kB]
Get:108 http://172.17.0.1/private/ stretch-staging/main libunistring0 armhf 0.9.3-5.2 [253 kB]
Get:109 http://172.17.0.1/private/ stretch-staging/main libx11-xcb1 armhf 2:1.6.3-1 [176 kB]
Get:110 http://172.17.0.1/private/ stretch-staging/main libxi6 armhf 2:1.7.4-1+b2 [74.2 kB]
Get:111 http://172.17.0.1/private/ stretch-staging/main libxmu6 armhf 2:1.1.2-1 [50.8 kB]
Get:112 http://172.17.0.1/private/ stretch-staging/main libxxf86vm1 armhf 1:1.1.4-1 [20.2 kB]
Get:113 http://172.17.0.1/private/ stretch-staging/main libzzip-0-13 armhf 0.13.62-3 [51.3 kB]
Get:114 http://172.17.0.1/private/ stretch-staging/main poppler-data all 0.4.7-3 [1470 kB]
Get:115 http://172.17.0.1/private/ stretch-staging/main libtrio2 armhf 1.16+dfsg1-3 [39.0 kB]
Get:116 http://172.17.0.1/private/ stretch-staging/main libboost-iostreams1.58.0 armhf 1.58.0+dfsg-3+b1 [47.8 kB]
Get:117 http://172.17.0.1/private/ stretch-staging/main libxapian22v5 armhf 1.2.21-1.2 [857 kB]
Get:118 http://172.17.0.1/private/ stretch-staging/main libmagic1 armhf 1:5.25-2 [250 kB]
Get:119 http://172.17.0.1/private/ stretch-staging/main file armhf 1:5.25-2 [61.2 kB]
Get:120 http://172.17.0.1/private/ stretch-staging/main gettext-base armhf 0.19.6-1 [119 kB]
Get:121 http://172.17.0.1/private/ stretch-staging/main libtinyxml2-2 armhf 2.2.0-1.1 [21.6 kB]
Get:122 http://172.17.0.1/private/ stretch-staging/main python-pygments all 2.0.1+dfsg-1.1 [481 kB]
Get:123 http://172.17.0.1/private/ stretch-staging/main cppcheck armhf 1.70-2 [630 kB]
Get:124 http://172.17.0.1/private/ stretch-staging/main gettext armhf 0.19.6-1 [1393 kB]
Get:125 http://172.17.0.1/private/ stretch-staging/main intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:126 http://172.17.0.1/private/ stretch-staging/main po-debconf all 1.0.18 [248 kB]
Get:127 http://172.17.0.1/private/ stretch-staging/main libarchive-zip-perl all 1.53-1 [97.3 kB]
Get:128 http://172.17.0.1/private/ stretch-staging/main libfile-stripnondeterminism-perl all 0.012-1 [10.6 kB]
Get:129 http://172.17.0.1/private/ stretch-staging/main dh-strip-nondeterminism all 0.012-1 [7282 B]
Get:130 http://172.17.0.1/private/ stretch-staging/main debhelper all 9.20151005 [817 kB]
Get:131 http://172.17.0.1/private/ stretch-staging/main libllvm3.5v5 armhf 1:3.5.2-2 [6502 kB]
Get:132 http://172.17.0.1/private/ stretch-staging/main libobjc4 armhf 5.2.1-22+rpi1 [90.2 kB]
Get:133 http://172.17.0.1/private/ stretch-staging/main libobjc-5-dev armhf 5.2.1-22+rpi1 [335 kB]
Get:134 http://172.17.0.1/private/ stretch-staging/main libclang1-3.5 armhf 1:3.5.2-2 [2820 kB]
Get:135 http://172.17.0.1/private/ stretch-staging/main doxygen armhf 1.8.9.1-5 [2582 kB]
Get:136 http://172.17.0.1/private/ stretch-staging/main libcups2 armhf 2.1.0-4 [264 kB]
Get:137 http://172.17.0.1/private/ stretch-staging/main libcupsfilters1 armhf 1.0.76-1 [104 kB]
Get:138 http://172.17.0.1/private/ stretch-staging/main libcupsimage2 armhf 2.1.0-4 [116 kB]
Get:139 http://172.17.0.1/private/ stretch-staging/main libijs-0.35 armhf 0.35-11 [16.1 kB]
Get:140 http://172.17.0.1/private/ stretch-staging/main libjbig2dec0 armhf 0.12+20150918-1 [50.7 kB]
Get:141 http://172.17.0.1/private/ stretch-staging/main libgs9-common all 9.16~dfsg-2 [2983 kB]
Get:142 http://172.17.0.1/private/ stretch-staging/main libgs9 armhf 9.16~dfsg-2 [1699 kB]
Get:143 http://172.17.0.1/private/ stretch-staging/main gsfonts all 1:8.11+urwcyr1.0.7~pre44-4.2 [3364 kB]
Get:144 http://172.17.0.1/private/ stretch-staging/main ghostscript armhf 9.16~dfsg-2 [92.2 kB]
Get:145 http://172.17.0.1/private/ stretch-staging/main libcdt5 armhf 2.38.0-10 [60.3 kB]
Get:146 http://172.17.0.1/private/ stretch-staging/main libcgraph6 armhf 2.38.0-10 [78.6 kB]
Get:147 http://172.17.0.1/private/ stretch-staging/main libvpx2 armhf 1.4.0-4+rpi1 [409 kB]
Get:148 http://172.17.0.1/private/ stretch-staging/main libxpm4 armhf 1:3.5.11-1+b1 [42.4 kB]
Get:149 http://172.17.0.1/private/ stretch-staging/main libgd3 armhf 2.1.1-4 [125 kB]
Get:150 http://172.17.0.1/private/ stretch-staging/main libpixman-1-0 armhf 0.33.2-2 [444 kB]
Get:151 http://172.17.0.1/private/ stretch-staging/main libxcb-render0 armhf 1.10-3+b1 [16.9 kB]
Get:152 http://172.17.0.1/private/ stretch-staging/main libxcb-shm0 armhf 1.10-3+b1 [11.4 kB]
Get:153 http://172.17.0.1/private/ stretch-staging/main libxrender1 armhf 1:0.9.8-1+b1 [28.4 kB]
Get:154 http://172.17.0.1/private/ stretch-staging/main libcairo2 armhf 1.14.2-2 [672 kB]
Get:155 http://172.17.0.1/private/ stretch-staging/main libthai-data all 0.1.22-2 [161 kB]
Get:156 http://172.17.0.1/private/ stretch-staging/main libdatrie1 armhf 0.2.9-3 [31.3 kB]
Get:157 http://172.17.0.1/private/ stretch-staging/main libthai0 armhf 0.1.22-2 [44.8 kB]
Get:158 http://172.17.0.1/private/ stretch-staging/main libpango-1.0-0 armhf 1.38.0-3 [291 kB]
Get:159 http://172.17.0.1/private/ stretch-staging/main libgraphite2-3 armhf 1.3.3-1 [61.1 kB]
Get:160 http://172.17.0.1/private/ stretch-staging/main libharfbuzz0b armhf 1.0.1-1+b1 [501 kB]
Get:161 http://172.17.0.1/private/ stretch-staging/main libpangoft2-1.0-0 armhf 1.38.0-3 [228 kB]
Get:162 http://172.17.0.1/private/ stretch-staging/main libpangocairo-1.0-0 armhf 1.38.0-3 [217 kB]
Get:163 http://172.17.0.1/private/ stretch-staging/main libpathplan4 armhf 2.38.0-10 [63.4 kB]
Get:164 http://172.17.0.1/private/ stretch-staging/main libxdot4 armhf 2.38.0-10 [57.6 kB]
Get:165 http://172.17.0.1/private/ stretch-staging/main libgvc6 armhf 2.38.0-10 [534 kB]
Get:166 http://172.17.0.1/private/ stretch-staging/main libgvpr2 armhf 2.38.0-10 [191 kB]
Get:167 http://172.17.0.1/private/ stretch-staging/main libxaw7 armhf 2:1.0.13-1 [164 kB]
Get:168 http://172.17.0.1/private/ stretch-staging/main graphviz armhf 2.38.0-10 [650 kB]
Get:169 http://172.17.0.1/private/ stretch-staging/main hicolor-icon-theme all 0.13-1 [8600 B]
Get:170 http://172.17.0.1/private/ stretch-staging/main icu-devtools armhf 55.1-5 [162 kB]
Get:171 http://172.17.0.1/private/ stretch-staging/main imagemagick-6.q16 armhf 8:6.8.9.9-6 [511 kB]
Get:172 http://172.17.0.1/private/ stretch-staging/main imagemagick armhf 8:6.8.9.9-6 [155 kB]
Get:173 http://172.17.0.1/private/ stretch-staging/main iso-codes all 3.62-1 [2317 kB]
Get:174 http://172.17.0.1/private/ stretch-staging/main libblas-dev armhf 1.2.20110419-10 [117 kB]
Get:175 http://172.17.0.1/private/ stretch-staging/main libboost1.58-dev armhf 1.58.0+dfsg-3+b1 [6235 kB]
Get:176 http://172.17.0.1/private/ stretch-staging/main libboost-date-time1.58.0 armhf 1.58.0+dfsg-3+b1 [40.2 kB]
Get:177 http://172.17.0.1/private/ stretch-staging/main libboost-serialization1.58.0 armhf 1.58.0+dfsg-3+b1 [118 kB]
Get:178 http://172.17.0.1/private/ stretch-staging/main libboost-serialization1.58-dev armhf 1.58.0+dfsg-3+b1 [170 kB]
Get:179 http://172.17.0.1/private/ stretch-staging/main libboost-date-time1.58-dev armhf 1.58.0+dfsg-3+b1 [49.9 kB]
Get:180 http://172.17.0.1/private/ stretch-staging/main libboost-date-time-dev armhf 1.58.0.1 [3116 B]
Get:181 http://172.17.0.1/private/ stretch-staging/main libboost-dev armhf 1.58.0.1 [3472 B]
Get:182 http://172.17.0.1/private/ stretch-staging/main libboost-regex1.58.0 armhf 1.58.0+dfsg-3+b1 [226 kB]
Get:183 http://172.17.0.1/private/ stretch-staging/main libicu-dev armhf 55.1-5 [8339 kB]
Get:184 http://172.17.0.1/private/ stretch-staging/main libboost-regex1.58-dev armhf 1.58.0+dfsg-3+b1 [312 kB]
Get:185 http://172.17.0.1/private/ stretch-staging/main libboost-iostreams1.58-dev armhf 1.58.0+dfsg-3+b1 [58.1 kB]
Get:186 http://172.17.0.1/private/ stretch-staging/main libboost-iostreams-dev armhf 1.58.0.1 [3112 B]
Get:187 http://172.17.0.1/private/ stretch-staging/main libboost-math1.58.0 armhf 1.58.0+dfsg-3+b1 [135 kB]
Get:188 http://172.17.0.1/private/ stretch-staging/main libboost-math1.58-dev armhf 1.58.0+dfsg-3+b1 [428 kB]
Get:189 http://172.17.0.1/private/ stretch-staging/main libboost-math-dev armhf 1.58.0.1 [3316 B]
Get:190 http://172.17.0.1/private/ stretch-staging/main libbz2-dev armhf 1.0.6-8 [27.8 kB]
Get:191 http://172.17.0.1/private/ stretch-staging/main libdrm-amdgpu1 armhf 2.4.64-1 [22.6 kB]
Get:192 http://172.17.0.1/private/ stretch-staging/main libdrm-radeon1 armhf 2.4.64-1 [26.9 kB]
Get:193 http://172.17.0.1/private/ stretch-staging/main libdrm-nouveau2 armhf 2.4.64-1 [21.5 kB]
Get:194 http://172.17.0.1/private/ stretch-staging/main libdrm-omap1 armhf 2.4.64-1 [14.5 kB]
Get:195 http://172.17.0.1/private/ stretch-staging/main libdrm-freedreno1 armhf 2.4.64-1 [21.8 kB]
Get:196 http://172.17.0.1/private/ stretch-staging/main libdrm-exynos1 armhf 2.4.64-1 [16.5 kB]
Get:197 http://172.17.0.1/private/ stretch-staging/main libdrm-tegra0 armhf 2.4.64-1 [13.9 kB]
Get:198 http://172.17.0.1/private/ stretch-staging/main libdrm-dev armhf 2.4.64-1 [161 kB]
Get:199 http://172.17.0.1/private/ stretch-staging/main xorg-sgml-doctools all 1:1.11-1 [21.9 kB]
Get:200 http://172.17.0.1/private/ stretch-staging/main x11proto-core-dev all 7.0.27-1 [729 kB]
Get:201 http://172.17.0.1/private/ stretch-staging/main libxau-dev armhf 1:1.0.8-1 [23.0 kB]
Get:202 http://172.17.0.1/private/ stretch-staging/main libxdmcp-dev armhf 1:1.1.2-1 [40.3 kB]
Get:203 http://172.17.0.1/private/ stretch-staging/main x11proto-input-dev all 2.3.1-1 [157 kB]
Get:204 http://172.17.0.1/private/ stretch-staging/main x11proto-kb-dev all 1.0.6-2 [269 kB]
Get:205 http://172.17.0.1/private/ stretch-staging/main xtrans-dev all 1.3.5-1 [100 kB]
Get:206 http://172.17.0.1/private/ stretch-staging/main libpthread-stubs0-dev armhf 0.3-4 [4042 B]
Get:207 http://172.17.0.1/private/ stretch-staging/main libxcb1-dev armhf 1.10-3+b1 [79.5 kB]
Get:208 http://172.17.0.1/private/ stretch-staging/main libx11-dev armhf 2:1.6.3-1 [749 kB]
Get:209 http://172.17.0.1/private/ stretch-staging/main mesa-common-dev armhf 10.6.8-1 [464 kB]
Get:210 http://172.17.0.1/private/ stretch-staging/main libglapi-mesa armhf 10.6.8-1 [70.0 kB]
Get:211 http://172.17.0.1/private/ stretch-staging/main libxcb-dri2-0 armhf 1.10-3+b1 [12.5 kB]
Get:212 http://172.17.0.1/private/ stretch-staging/main libxcb-dri3-0 armhf 1.10-3+b1 [10.9 kB]
Get:213 http://172.17.0.1/private/ stretch-staging/main libxcb-glx0 armhf 1.10-3+b1 [25.4 kB]
Get:214 http://172.17.0.1/private/ stretch-staging/main libxcb-present0 armhf 1.10-3+b1 [11.0 kB]
Get:215 http://172.17.0.1/private/ stretch-staging/main libxcb-sync1 armhf 1.10-3+b1 [13.8 kB]
Get:216 http://172.17.0.1/private/ stretch-staging/main libxfixes3 armhf 1:5.0.1-2+b2 [19.9 kB]
Get:217 http://172.17.0.1/private/ stretch-staging/main libxdamage1 armhf 1:1.1.4-2+b1 [14.1 kB]
Get:218 http://172.17.0.1/private/ stretch-staging/main libxshmfence1 armhf 1.2-1 [7642 B]
Get:219 http://172.17.0.1/private/ stretch-staging/main libgl1-mesa-glx armhf 10.6.8-1 [165 kB]
Get:220 http://172.17.0.1/private/ stretch-staging/main libx11-xcb-dev armhf 2:1.6.3-1 [178 kB]
Get:221 http://172.17.0.1/private/ stretch-staging/main libxcb-dri3-dev armhf 1.10-3+b1 [11.8 kB]
Get:222 http://172.17.0.1/private/ stretch-staging/main libxcb-randr0 armhf 1.10-3+b1 [19.7 kB]
Get:223 http://172.17.0.1/private/ stretch-staging/main libxcb-render0-dev armhf 1.10-3+b1 [22.3 kB]
Get:224 http://172.17.0.1/private/ stretch-staging/main libxcb-randr0-dev armhf 1.10-3+b1 [26.4 kB]
Get:225 http://172.17.0.1/private/ stretch-staging/main libxcb-xfixes0 armhf 1.10-3+b1 [14.6 kB]
Get:226 http://172.17.0.1/private/ stretch-staging/main libxcb-shape0 armhf 1.10-3+b1 [11.5 kB]
Get:227 http://172.17.0.1/private/ stretch-staging/main libxcb-shape0-dev armhf 1.10-3+b1 [13.0 kB]
Get:228 http://172.17.0.1/private/ stretch-staging/main libxcb-xfixes0-dev armhf 1.10-3+b1 [17.9 kB]
Get:229 http://172.17.0.1/private/ stretch-staging/main libxcb-sync-dev armhf 1.10-3+b1 [16.4 kB]
Get:230 http://172.17.0.1/private/ stretch-staging/main libxcb-present-dev armhf 1.10-3+b1 [12.7 kB]
Get:231 http://172.17.0.1/private/ stretch-staging/main libxshmfence-dev armhf 1.2-1 [7152 B]
Get:232 http://172.17.0.1/private/ stretch-staging/main libxcb-dri2-0-dev armhf 1.10-3+b1 [14.8 kB]
Get:233 http://172.17.0.1/private/ stretch-staging/main libxcb-glx0-dev armhf 1.10-3+b1 [36.6 kB]
Get:234 http://172.17.0.1/private/ stretch-staging/main x11proto-xext-dev all 7.3.0-1 [212 kB]
Get:235 http://172.17.0.1/private/ stretch-staging/main x11proto-fixes-dev all 1:5.0-2 [19.2 kB]
Get:236 http://172.17.0.1/private/ stretch-staging/main libxfixes-dev armhf 1:5.0.1-2+b2 [21.9 kB]
Get:237 http://172.17.0.1/private/ stretch-staging/main x11proto-damage-dev all 1:1.2.1-2 [11.8 kB]
Get:238 http://172.17.0.1/private/ stretch-staging/main libxdamage-dev armhf 1:1.1.4-2+b1 [13.9 kB]
Get:239 http://172.17.0.1/private/ stretch-staging/main libxext-dev armhf 2:1.3.3-1 [102 kB]
Get:240 http://172.17.0.1/private/ stretch-staging/main x11proto-xf86vidmode-dev all 2.3.1-2 [6114 B]
Get:241 http://172.17.0.1/private/ stretch-staging/main libxxf86vm-dev armhf 1:1.1.4-1 [24.8 kB]
Get:242 http://172.17.0.1/private/ stretch-staging/main x11proto-dri2-dev all 2.8-2 [18.2 kB]
Get:243 http://172.17.0.1/private/ stretch-staging/main x11proto-gl-dev all 1.4.17-1 [28.0 kB]
Get:244 http://172.17.0.1/private/ stretch-staging/main libgl1-mesa-dev armhf 10.6.8-1 [38.6 kB]
Get:245 http://172.17.0.1/private/ stretch-staging/main libglpk36 armhf 4.56-1 [358 kB]
Get:246 http://172.17.0.1/private/ stretch-staging/main libgmpxx4ldbl armhf 2:6.0.0+dfsg-7+rpi1 [21.6 kB]
Get:247 http://172.17.0.1/private/ stretch-staging/main libgmp-dev armhf 2:6.0.0+dfsg-7+rpi1 [553 kB]
Get:248 http://172.17.0.1/private/ stretch-staging/main zlib1g-dev armhf 1:1.2.8.dfsg-2+b1 [197 kB]
Get:249 http://172.17.0.1/private/ stretch-staging/main liblapack-dev armhf 3.5.0-4 [1364 kB]
Get:250 http://172.17.0.1/private/ stretch-staging/main libsuitesparse-dev armhf 1:4.2.1-3 [1259 kB]
Get:251 http://172.17.0.1/private/ stretch-staging/main libglpk-dev armhf 4.56-1 [389 kB]
Get:252 http://172.17.0.1/private/ stretch-staging/main libglu1-mesa armhf 9.0.0-2.1 [130 kB]
Get:253 http://172.17.0.1/private/ stretch-staging/main libglu1-mesa-dev armhf 9.0.0-2.1 [169 kB]
Get:254 http://172.17.0.1/private/ stretch-staging/main libgsl0ldbl armhf 1.16+dfsg-4 [664 kB]
Get:255 http://172.17.0.1/private/ stretch-staging/main libgsl0-dev armhf 1.16+dfsg-4 [770 kB]
Get:256 http://172.17.0.1/private/ stretch-staging/main libgstreamer1.0-0 armhf 1.6.0-1 [1729 kB]
Get:257 http://172.17.0.1/private/ stretch-staging/main liborc-0.4-0 armhf 1:0.4.24-1 [119 kB]
Get:258 http://172.17.0.1/private/ stretch-staging/main libgstreamer-plugins-base1.0-0 armhf 1.6.0-1 [1405 kB]
Get:259 http://172.17.0.1/private/ stretch-staging/main libharfbuzz-icu0 armhf 1.0.1-1+b1 [390 kB]
Get:260 http://172.17.0.1/private/ stretch-staging/main libkpathsea6 armhf 2015.20150524.37493-6 [148 kB]
Get:261 http://172.17.0.1/private/ stretch-staging/main libpaper-utils armhf 1.1.24+nmu4 [17.2 kB]
Get:262 http://172.17.0.1/private/ stretch-staging/main libopenjpeg5 armhf 1:1.5.2-3.1 [93.6 kB]
Get:263 http://172.17.0.1/private/ stretch-staging/main libpoppler46 armhf 0.26.5-4 [1084 kB]
Get:264 http://172.17.0.1/private/ stretch-staging/main libpotrace0 armhf 1.12-1 [22.9 kB]
Get:265 http://172.17.0.1/private/ stretch-staging/main libptexenc1 armhf 2015.20150524.37493-6 [53.3 kB]
Get:266 http://172.17.0.1/private/ stretch-staging/main qtcore4-l10n all 4:4.8.7+dfsg-3+rpi1 [661 kB]
Get:267 http://172.17.0.1/private/ stretch-staging/main libqtcore4 armhf 4:4.8.7+dfsg-3+rpi1 [1348 kB]
Get:268 http://172.17.0.1/private/ stretch-staging/main libqt4-xml armhf 4:4.8.7+dfsg-3+rpi1 [124 kB]
Get:269 http://172.17.0.1/private/ stretch-staging/main libqtdbus4 armhf 4:4.8.7+dfsg-3+rpi1 [192 kB]
Get:270 http://172.17.0.1/private/ stretch-staging/main qtchooser armhf 52-gae5eeef-2 [20.6 kB]
Get:271 http://172.17.0.1/private/ stretch-staging/main qdbus armhf 4:4.8.7+dfsg-3+rpi1 [71.3 kB]
Get:272 http://172.17.0.1/private/ stretch-staging/main libqt4-dbus armhf 4:4.8.7+dfsg-3+rpi1 [51.7 kB]
Get:273 http://172.17.0.1/private/ stretch-staging/main libqt4-network armhf 4:4.8.7+dfsg-3+rpi1 [498 kB]
Get:274 http://172.17.0.1/private/ stretch-staging/main libqt4-script armhf 4:4.8.7+dfsg-3+rpi1 [680 kB]
Get:275 http://172.17.0.1/private/ stretch-staging/main libqt4-sql armhf 4:4.8.7+dfsg-3+rpi1 [127 kB]
Get:276 http://172.17.0.1/private/ stretch-staging/main libqt4-xmlpatterns armhf 4:4.8.7+dfsg-3+rpi1 [874 kB]
Get:277 http://172.17.0.1/private/ stretch-staging/main libqtgui4 armhf 4:4.8.7+dfsg-3+rpi1 [3425 kB]
Get:278 http://172.17.0.1/private/ stretch-staging/main libqt4-declarative armhf 4:4.8.7+dfsg-3+rpi1 [895 kB]
Get:279 http://172.17.0.1/private/ stretch-staging/main libqt4-designer armhf 4:4.8.7+dfsg-3+rpi1 [3355 kB]
Get:280 http://172.17.0.1/private/ stretch-staging/main libqt4-qt3support armhf 4:4.8.7+dfsg-3+rpi1 [900 kB]
Get:281 http://172.17.0.1/private/ stretch-staging/main libqt4-dev-bin armhf 4:4.8.7+dfsg-3+rpi1 [1432 kB]
Get:282 http://172.17.0.1/private/ stretch-staging/main libqt4-help armhf 4:4.8.7+dfsg-3+rpi1 [218 kB]
Get:283 http://172.17.0.1/private/ stretch-staging/main libqt4-scripttools armhf 4:4.8.7+dfsg-3+rpi1 [228 kB]
Get:284 http://172.17.0.1/private/ stretch-staging/main libqt4-svg armhf 4:4.8.7+dfsg-3+rpi1 [156 kB]
Get:285 http://172.17.0.1/private/ stretch-staging/main libqt4-test armhf 4:4.8.7+dfsg-3+rpi1 [96.4 kB]
Get:286 http://172.17.0.1/private/ stretch-staging/main qt4-linguist-tools armhf 4:4.8.7+dfsg-3+rpi1 [753 kB]
Get:287 http://172.17.0.1/private/ stretch-staging/main qt4-qmake armhf 4:4.8.7+dfsg-3+rpi1 [1137 kB]
Get:288 http://172.17.0.1/private/ stretch-staging/main libqt4-dev armhf 4:4.8.7+dfsg-3+rpi1 [881 kB]
Get:289 http://172.17.0.1/private/ stretch-staging/main libqt4-opengl armhf 4:4.8.7+dfsg-3+rpi1 [290 kB]
Get:290 http://172.17.0.1/private/ stretch-staging/main libqt4-opengl-dev armhf 4:4.8.7+dfsg-3+rpi1 [68.1 kB]
Get:291 http://172.17.0.1/private/ stretch-staging/main libqtwebkit4 armhf 2.3.4.dfsg-5 [6956 kB]
Get:292 http://172.17.0.1/private/ stretch-staging/main libqtwebkit-dev armhf 2.3.4.dfsg-5 [114 kB]
Get:293 http://172.17.0.1/private/ stretch-staging/main libsvm3 armhf 3.12-1.1 [34.9 kB]
Get:294 http://172.17.0.1/private/ stretch-staging/main libsvm-dev armhf 3.12-1.1 [37.7 kB]
Get:295 http://172.17.0.1/private/ stretch-staging/main libsynctex1 armhf 2015.20150524.37493-6 [55.9 kB]
Get:296 http://172.17.0.1/private/ stretch-staging/main libtexlua52 armhf 2015.20150524.37493-6 [84.2 kB]
Get:297 http://172.17.0.1/private/ stretch-staging/main libtexluajit2 armhf 2015.20150524.37493-6 [185 kB]
Get:298 http://172.17.0.1/private/ stretch-staging/main libxerces-c3.1 armhf 3.1.1-5.1+b1 [701 kB]
Get:299 http://172.17.0.1/private/ stretch-staging/main libxerces-c-dev armhf 3.1.1-5.1+b1 [1500 kB]
Get:300 http://172.17.0.1/private/ stretch-staging/main tex-common all 6.03 [563 kB]
Get:301 http://172.17.0.1/private/ stretch-staging/main preview-latex-style all 11.87-3+deb8u1 [318 kB]
Get:302 http://172.17.0.1/private/ stretch-staging/main seqan-dev all 1.4.1+dfsg-2 [2616 kB]
Get:303 http://172.17.0.1/private/ stretch-staging/main t1utils armhf 1.38-4 [50.1 kB]
Get:304 http://172.17.0.1/private/ stretch-staging/main xdg-utils all 1.1.1-1 [71.1 kB]
Get:305 http://172.17.0.1/private/ stretch-staging/main texlive-binaries armhf 2015.20150524.37493-6 [6798 kB]
Get:306 http://172.17.0.1/private/ stretch-staging/main texlive-base all 2015.20150917-1 [17.9 MB]
Get:307 http://172.17.0.1/private/ stretch-staging/main texlive-latex-base all 2015.20150917-1 [1021 kB]
Get:308 http://172.17.0.1/private/ stretch-staging/main texlive-extra-utils all 2015.20150917-1 [11.8 MB]
Get:309 http://172.17.0.1/private/ stretch-staging/main texlive-font-utils all 2015.20150917-1 [1729 kB]
Get:310 http://172.17.0.1/private/ stretch-staging/main texlive-fonts-recommended all 2015.20150917-1 [5685 kB]
Get:311 http://172.17.0.1/private/ stretch-staging/main texlive-latex-recommended all 2015.20150917-1 [8365 kB]
Get:312 http://172.17.0.1/private/ stretch-staging/main texlive-pictures all 2015.20150917-1 [3146 kB]
Get:313 http://172.17.0.1/private/ stretch-staging/main texlive-latex-extra all 2015.20150917-1 [9758 kB]
Get:314 http://172.17.0.1/private/ stretch-staging/main coinor-libcoinutils3v5 armhf 2.9.15-3.1 [379 kB]
Get:315 http://172.17.0.1/private/ stretch-staging/main coinor-libcoinutils-dev armhf 2.9.15-3.1 [700 kB]
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Setting up libtiff5:armhf (4.0.5-1) ...
Setting up libxext6:armhf (2:1.3.3-1) ...
Setting up libmagickcore-6.q16-2:armhf (8:6.8.9.9-6) ...
Setting up libmagickwand-6.q16-2:armhf (8:6.8.9.9-6) ...
Setting up libmng1:armhf (1.0.10+dfsg-3.1) ...
Setting up libpaper1:armhf (1.1.24+nmu4) ...

Creating config file /etc/papersize with new version
Setting up libspqr1.3.1:armhf (1:4.2.1-3) ...
Setting up libumfpack5.6.2:armhf (1:4.2.1-3) ...
Setting up libunistring0:armhf (0.9.3-5.2) ...
Setting up libx11-xcb1:armhf (2:1.6.3-1) ...
Setting up libxi6:armhf (2:1.7.4-1+b2) ...
Setting up libxmu6:armhf (2:1.1.2-1) ...
Setting up libxxf86vm1:armhf (1:1.1.4-1) ...
Setting up libzzip-0-13:armhf (0.13.62-3) ...
Setting up poppler-data (0.4.7-3) ...
Setting up libtrio2:armhf (1.16+dfsg1-3) ...
Setting up libboost-iostreams1.58.0:armhf (1.58.0+dfsg-3+b1) ...
Setting up libxapian22v5 (1.2.21-1.2) ...
Setting up libmagic1:armhf (1:5.25-2) ...
Setting up file (1:5.25-2) ...
Setting up gettext-base (0.19.6-1) ...
Setting up libtinyxml2-2:armhf (2.2.0-1.1) ...
Setting up python-pygments (2.0.1+dfsg-1.1) ...
Setting up cppcheck (1.70-2) ...
Setting up gettext (0.19.6-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.18) ...
Setting up libarchive-zip-perl (1.53-1) ...
Setting up libfile-stripnondeterminism-perl (0.012-1) ...
Setting up libllvm3.5v5:armhf (1:3.5.2-2) ...
Setting up libobjc4:armhf (5.2.1-22+rpi1) ...
Setting up libobjc-5-dev:armhf (5.2.1-22+rpi1) ...
Setting up libclang1-3.5:armhf (1:3.5.2-2) ...
Setting up doxygen (1.8.9.1-5) ...
Setting up libcups2:armhf (2.1.0-4) ...
Setting up libijs-0.35:armhf (0.35-11) ...
Setting up libjbig2dec0 (0.12+20150918-1) ...
Setting up libgs9-common (9.16~dfsg-2) ...
Setting up gsfonts (1:8.11+urwcyr1.0.7~pre44-4.2) ...
Setting up libcdt5 (2.38.0-10) ...
Setting up libcgraph6 (2.38.0-10) ...
Setting up libvpx2:armhf (1.4.0-4+rpi1) ...
Setting up libxpm4:armhf (1:3.5.11-1+b1) ...
Setting up libgd3:armhf (2.1.1-4) ...
Setting up libpixman-1-0:armhf (0.33.2-2) ...
Setting up libxcb-render0:armhf (1.10-3+b1) ...
Setting up libxcb-shm0:armhf (1.10-3+b1) ...
Setting up libxrender1:armhf (1:0.9.8-1+b1) ...
Setting up libcairo2:armhf (1.14.2-2) ...
Setting up libthai-data (0.1.22-2) ...
Setting up libdatrie1:armhf (0.2.9-3) ...
Setting up libthai0:armhf (0.1.22-2) ...
Setting up libpango-1.0-0:armhf (1.38.0-3) ...
Setting up libgraphite2-3:armhf (1.3.3-1) ...
Setting up libharfbuzz0b:armhf (1.0.1-1+b1) ...
Setting up libpangoft2-1.0-0:armhf (1.38.0-3) ...
Setting up libpangocairo-1.0-0:armhf (1.38.0-3) ...
Setting up libpathplan4 (2.38.0-10) ...
Setting up libxdot4 (2.38.0-10) ...
Setting up libgvc6 (2.38.0-10) ...
Setting up libgvpr2 (2.38.0-10) ...
Setting up libxaw7:armhf (2:1.0.13-1) ...
Setting up graphviz (2.38.0-10) ...
Setting up hicolor-icon-theme (0.13-1) ...
Setting up icu-devtools (55.1-5) ...
Setting up imagemagick-6.q16 (8:6.8.9.9-6) ...
Setting up imagemagick (8:6.8.9.9-6) ...
update-alternatives: using /usr/bin/compare-im6 to provide /usr/bin/compare (compare) in auto mode
update-alternatives: using /usr/bin/animate-im6 to provide /usr/bin/animate (animate) in auto mode
update-alternatives: using /usr/bin/convert-im6 to provide /usr/bin/convert (convert) in auto mode
update-alternatives: using /usr/bin/composite-im6 to provide /usr/bin/composite (composite) in auto mode
update-alternatives: using /usr/bin/conjure-im6 to provide /usr/bin/conjure (conjure) in auto mode
update-alternatives: using /usr/bin/import-im6 to provide /usr/bin/import (import) in auto mode
update-alternatives: using /usr/bin/identify-im6 to provide /usr/bin/identify (identify) in auto mode
update-alternatives: using /usr/bin/stream-im6 to provide /usr/bin/stream (stream) in auto mode
update-alternatives: using /usr/bin/display-im6 to provide /usr/bin/display (display) in auto mode
update-alternatives: using /usr/bin/montage-im6 to provide /usr/bin/montage (montage) in auto mode
update-alternatives: using /usr/bin/mogrify-im6 to provide /usr/bin/mogrify (mogrify) in auto mode
Setting up iso-codes (3.62-1) ...
Setting up libblas-dev (1.2.20110419-10) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
Setting up libboost1.58-dev:armhf (1.58.0+dfsg-3+b1) ...
Setting up libboost-date-time1.58.0:armhf (1.58.0+dfsg-3+b1) ...
Setting up libboost-serialization1.58.0:armhf (1.58.0+dfsg-3+b1) ...
Setting up libboost-serialization1.58-dev:armhf (1.58.0+dfsg-3+b1) ...
Setting up libboost-date-time1.58-dev:armhf (1.58.0+dfsg-3+b1) ...
Setting up libboost-date-time-dev:armhf (1.58.0.1) ...
Setting up libboost-dev:armhf (1.58.0.1) ...
Setting up libboost-regex1.58.0:armhf (1.58.0+dfsg-3+b1) ...
Setting up libicu-dev:armhf (55.1-5) ...
Setting up libboost-regex1.58-dev:armhf (1.58.0+dfsg-3+b1) ...
Setting up libboost-iostreams1.58-dev:armhf (1.58.0+dfsg-3+b1) ...
Setting up libboost-iostreams-dev:armhf (1.58.0.1) ...
Setting up libboost-math1.58.0:armhf (1.58.0+dfsg-3+b1) ...
Setting up libboost-math1.58-dev:armhf (1.58.0+dfsg-3+b1) ...
Setting up libboost-math-dev:armhf (1.58.0.1) ...
Setting up libbz2-dev:armhf (1.0.6-8) ...
Setting up libdrm-amdgpu1:armhf (2.4.64-1) ...
Setting up libdrm-radeon1:armhf (2.4.64-1) ...
Setting up libdrm-nouveau2:armhf (2.4.64-1) ...
Setting up libdrm-omap1:armhf (2.4.64-1) ...
Setting up libdrm-freedreno1:armhf (2.4.64-1) ...
Setting up libdrm-exynos1:armhf (2.4.64-1) ...
Setting up libdrm-tegra0:armhf (2.4.64-1) ...
Setting up libdrm-dev:armhf (2.4.64-1) ...
Setting up xorg-sgml-doctools (1:1.11-1) ...
Setting up x11proto-core-dev (7.0.27-1) ...
Setting up libxau-dev:armhf (1:1.0.8-1) ...
Setting up libxdmcp-dev:armhf (1:1.1.2-1) ...
Setting up x11proto-input-dev (2.3.1-1) ...
Setting up x11proto-kb-dev (1.0.6-2) ...
Setting up xtrans-dev (1.3.5-1) ...
Setting up libpthread-stubs0-dev:armhf (0.3-4) ...
Setting up libxcb1-dev:armhf (1.10-3+b1) ...
Setting up libx11-dev:armhf (2:1.6.3-1) ...
Setting up mesa-common-dev:armhf (10.6.8-1) ...
Setting up libglapi-mesa:armhf (10.6.8-1) ...
Setting up libxcb-dri2-0:armhf (1.10-3+b1) ...
Setting up libxcb-dri3-0:armhf (1.10-3+b1) ...
Setting up libxcb-glx0:armhf (1.10-3+b1) ...
Setting up libxcb-present0:armhf (1.10-3+b1) ...
Setting up libxcb-sync1:armhf (1.10-3+b1) ...
Setting up libxfixes3:armhf (1:5.0.1-2+b2) ...
Setting up libxdamage1:armhf (1:1.1.4-2+b1) ...
Setting up libxshmfence1:armhf (1.2-1) ...
Setting up libgl1-mesa-glx:armhf (10.6.8-1) ...
Setting up libx11-xcb-dev:armhf (2:1.6.3-1) ...
Setting up libxcb-dri3-dev:armhf (1.10-3+b1) ...
Setting up libxcb-randr0:armhf (1.10-3+b1) ...
Setting up libxcb-render0-dev:armhf (1.10-3+b1) ...
Setting up libxcb-randr0-dev:armhf (1.10-3+b1) ...
Setting up libxcb-xfixes0:armhf (1.10-3+b1) ...
Setting up libxcb-shape0:armhf (1.10-3+b1) ...
Setting up libxcb-shape0-dev:armhf (1.10-3+b1) ...
Setting up libxcb-xfixes0-dev:armhf (1.10-3+b1) ...
Setting up libxcb-sync-dev:armhf (1.10-3+b1) ...
Setting up libxcb-present-dev:armhf (1.10-3+b1) ...
Setting up libxshmfence-dev:armhf (1.2-1) ...
Setting up libxcb-dri2-0-dev:armhf (1.10-3+b1) ...
Setting up libxcb-glx0-dev:armhf (1.10-3+b1) ...
Setting up x11proto-xext-dev (7.3.0-1) ...
Setting up x11proto-fixes-dev (1:5.0-2) ...
Setting up libxfixes-dev:armhf (1:5.0.1-2+b2) ...
Setting up x11proto-damage-dev (1:1.2.1-2) ...
Setting up libxdamage-dev:armhf (1:1.1.4-2+b1) ...
Setting up libxext-dev:armhf (2:1.3.3-1) ...
Setting up x11proto-xf86vidmode-dev (2.3.1-2) ...
Setting up libxxf86vm-dev:armhf (1:1.1.4-1) ...
Setting up x11proto-dri2-dev (2.8-2) ...
Setting up x11proto-gl-dev (1.4.17-1) ...
Setting up libgl1-mesa-dev:armhf (10.6.8-1) ...
Setting up libglpk36:armhf (4.56-1) ...
Setting up libgmpxx4ldbl:armhf (2:6.0.0+dfsg-7+rpi1) ...
Setting up libgmp-dev:armhf (2:6.0.0+dfsg-7+rpi1) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-2+b1) ...
Setting up liblapack-dev (3.5.0-4) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
Setting up libsuitesparse-dev:armhf (1:4.2.1-3) ...
Setting up libglpk-dev (4.56-1) ...
Setting up libglu1-mesa:armhf (9.0.0-2.1) ...
Setting up libglu1-mesa-dev:armhf (9.0.0-2.1) ...
Setting up libgsl0ldbl:armhf (1.16+dfsg-4) ...
Setting up libgsl0-dev (1.16+dfsg-4) ...
Setting up libgstreamer1.0-0:armhf (1.6.0-1) ...
Setcap worked! gst-ptp-helper is not suid!
Setting up liborc-0.4-0:armhf (1:0.4.24-1) ...
Setting up libgstreamer-plugins-base1.0-0:armhf (1.6.0-1) ...
Setting up libharfbuzz-icu0:armhf (1.0.1-1+b1) ...
Setting up libkpathsea6 (2015.20150524.37493-6) ...
Setting up libpaper-utils (1.1.24+nmu4) ...
Setting up libopenjpeg5:armhf (1:1.5.2-3.1) ...
Setting up libpoppler46:armhf (0.26.5-4) ...
Setting up libpotrace0 (1.12-1) ...
Setting up libptexenc1 (2015.20150524.37493-6) ...
Setting up qtcore4-l10n (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqtcore4:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-xml:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqtdbus4:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up qtchooser (52-gae5eeef-2) ...
Setting up qdbus (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-dbus:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-network:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-script:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-sql:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-xmlpatterns:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqtgui4:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-declarative:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-designer:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-qt3support:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-dev-bin (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-help:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-scripttools:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-svg:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-test:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up qt4-linguist-tools (4:4.8.7+dfsg-3+rpi1) ...
Setting up qt4-qmake (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-dev (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-opengl:armhf (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqt4-opengl-dev (4:4.8.7+dfsg-3+rpi1) ...
Setting up libqtwebkit4:armhf (2.3.4.dfsg-5) ...
Setting up libqtwebkit-dev (2.3.4.dfsg-5) ...
Setting up libsvm3 (3.12-1.1) ...
Setting up libsvm-dev (3.12-1.1) ...
Setting up libsynctex1 (2015.20150524.37493-6) ...
Setting up libtexlua52 (2015.20150524.37493-6) ...
Setting up libtexluajit2 (2015.20150524.37493-6) ...
Setting up libxerces-c3.1:armhf (3.1.1-5.1+b1) ...
Setting up libxerces-c-dev (3.1.1-5.1+b1) ...
Setting up tex-common (6.03) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up preview-latex-style (11.87-3+deb8u1) ...
update-language: texlive-base not installed and configured, doing nothing!
Regenerating '/var/lib/texmf/fmtutil.cnf-DEBIAN'... done.
Regenerating '/var/lib/texmf/fmtutil.cnf-TEXLIVEDIST'... done.
update-fmtutil has updated the following file(s):
	/var/lib/texmf/fmtutil.cnf-DEBIAN
	/var/lib/texmf/fmtutil.cnf-TEXLIVEDIST
If you want to activate the changes in the above file(s),
you should run fmtutil-sys or fmtutil.
Setting up seqan-dev (1.4.1+dfsg-2) ...
Setting up t1utils (1.38-4) ...
Setting up xdg-utils (1.1.1-1) ...
Setting up coinor-libcoinutils3v5 (2.9.15-3.1) ...
Setting up coinor-libcoinutils-dev (2.9.15-3.1) ...
Setting up debhelper (9.20151005) ...
Setting up libcupsfilters1:armhf (1.0.76-1) ...
Setting up libcupsimage2:armhf (2.1.0-4) ...
Setting up libgs9 (9.16~dfsg-2) ...
Setting up ghostscript (9.16~dfsg-2) ...
Setting up texlive-binaries (2015.20150524.37493-6) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up dh-strip-nondeterminism (0.012-1) ...
Processing triggers for tex-common (6.03) ...
update-language: texlive-base not installed and configured, doing nothing!
texlive-base is not ready, skipping fmtutil-sys --all call
Setting up texlive-base (2015.20150917-1) ...
/usr/bin/tl-paper: setting paper size for dvips to a4.
/usr/bin/tl-paper: setting paper size for dvipdfmx to a4.
/usr/bin/tl-paper: setting paper size for xdvi to a4.
/usr/bin/tl-paper: setting paper size for pdftex to a4.
Processing triggers for tex-common (6.03) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
Setting up texlive-font-utils (2015.20150917-1) ...
Setting up texlive-fonts-recommended (2015.20150917-1) ...
Setting up texlive-latex-base (2015.20150917-1) ...
Processing triggers for tex-common (6.03) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
Setting up texlive-latex-recommended (2015.20150917-1) ...
Setting up texlive-pictures (2015.20150917-1) ...
Setting up texlive-extra-utils (2015.20150917-1) ...
Processing triggers for tex-common (6.03) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up texlive-latex-extra (2015.20150917-1) ...
Processing triggers for tex-common (6.03) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up sbuild-build-depends-openms-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.19-22) ...
Processing triggers for systemd (227-2) ...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment                                                            │
└──────────────────────────────────────────────────────────────────────────────┘

Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.25.1-3 dpkg-dev_1.18.3 g++-4.9_4.9.3-4 g++-5_5.2.1-22+rpi1 gcc-4.9_4.9.3-4 gcc-5_5.2.1-22+rpi1 libc6-dev_2.19-22 libstdc++-4.9-dev_4.9.3-4 libstdc++-5-dev_5.2.1-22+rpi1 libstdc++6_5.2.1-22+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: acl_2.2.52-2 adduser_3.113+nmu3 apt_1.0.10.2 base-files_9.4+rpi1 base-passwd_3.5.38 bash_4.3-14 binutils_2.25.1-3 bsdmainutils_9.0.6 bsdutils_1:2.27-3 build-essential_11.7 bzip2_1.0.6-8 cmake_3.3.2-1 cmake-data_3.3.2-1 coinor-libcoinutils-dev_2.9.15-3.1 coinor-libcoinutils3v5_2.9.15-3.1 coreutils_8.23-4 cpio_2.11+dfsg-4.1 cpp_4:5.2.1-4+rpi2 cpp-4.9_4.9.3-4 cpp-5_5.2.1-22+rpi1 cppcheck_1.70-2 dash_0.5.7-4 debconf_1.5.57 debfoster_2.7-2 debhelper_9.20151005 debianutils_4.5.1 dh-strip-nondeterminism_0.012-1 diffutils_1:3.3-2 dmsetup_2:1.02.104-1 doxygen_1.8.9.1-5 dpkg_1.18.3 dpkg-dev_1.18.3 e2fslibs_1.42.13-1 e2fsprogs_1.42.13-1 fakeroot_1.20.2-1 file_1:5.25-2 findutils_4.4.2-9 fontconfig_2.11.0-6.3 fontconfig-config_2.11.0-6.3 fonts-dejavu-core_2.35-1 g++_4:5.2.1-4+rpi2 g++-4.9_4.9.3-4 g++-5_5.2.1-22+rpi1 gcc_4:5.2.1-4+rpi2 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-1 gcc-4.9_4.9.3-4 gcc-4.9-base_4.9.3-4 gcc-5_5.2.1-22+rpi1 gcc-5-base_5.2.1-22+rpi1 gettext_0.19.6-1 gettext-base_0.19.6-1 ghostscript_9.16~dfsg-2 gnupg_1.4.19-5 gpgv_1.4.19-5 graphviz_2.38.0-10 grep_2.21-2 groff-base_1.22.3-1 gsfonts_1:8.11+urwcyr1.0.7~pre44-4.2 gzip_1.6-4 hicolor-icon-theme_0.13-1 hostname_3.16 icu-devtools_55.1-5 imagemagick_8:6.8.9.9-6 imagemagick-6.q16_8:6.8.9.9-6 imagemagick-common_8:6.8.9.9-6 init_1.23 init-system-helpers_1.23 initramfs-tools_0.120 initscripts_2.88dsf-59.2 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.4 iso-codes_3.62-1 klibc-utils_2.0.4-2+rpi1 kmod_21-1 libacl1_2.2.52-2 libamd2.3.1_1:4.2.1-3 libapparmor1_2.10-2 libapt-pkg4.12_1.0.9.10 libapt-pkg4.16_1.0.10.2 libarchive-zip-perl_1.53-1 libarchive13_3.1.2-11+b1 libasan1_4.9.3-4 libasan2_5.2.1-22+rpi1 libatomic1_5.2.1-22+rpi1 libattr1_1:2.4.47-2 libaudio2_1.9.4-3 libaudit-common_1:2.4.4-4 libaudit1_1:2.4.4-4 libavahi-client3_0.6.31-5 libavahi-common-data_0.6.31-5 libavahi-common3_0.6.31-5 libblas-common_1.2.20110419-10 libblas-dev_1.2.20110419-10 libblas3_1.2.20110419-10 libblkid1_2.27-3 libboost-date-time-dev_1.58.0.1 libboost-date-time1.58-dev_1.58.0+dfsg-3+b1 libboost-date-time1.58.0_1.58.0+dfsg-3+b1 libboost-dev_1.58.0.1 libboost-iostreams-dev_1.58.0.1 libboost-iostreams1.58-dev_1.58.0+dfsg-3+b1 libboost-iostreams1.58.0_1.58.0+dfsg-3+b1 libboost-math-dev_1.58.0.1 libboost-math1.58-dev_1.58.0+dfsg-3+b1 libboost-math1.58.0_1.58.0+dfsg-3+b1 libboost-regex1.58-dev_1.58.0+dfsg-3+b1 libboost-regex1.58.0_1.58.0+dfsg-3+b1 libboost-serialization1.58-dev_1.58.0+dfsg-3+b1 libboost-serialization1.58.0_1.58.0+dfsg-3+b1 libboost1.58-dev_1.58.0+dfsg-3+b1 libbsd0_0.7.0-2 libbtf1.2.0_1:4.2.1-3 libbz2-1.0_1.0.6-8 libbz2-dev_1.0.6-8 libc-bin_2.19-22 libc-dev-bin_2.19-22 libc6_2.19-22 libc6-dev_2.19-22 libcairo2_1.14.2-2 libcamd2.3.1_1:4.2.1-3 libcap2_1:2.24-12 libcap2-bin_1:2.24-12 libcc1-0_5.2.1-22+rpi1 libccolamd2.8.0_1:4.2.1-3 libcdt5_2.38.0-10 libcgraph6_2.38.0-10 libcholmod2.1.2_1:4.2.1-3 libclang1-3.5_1:3.5.2-2 libcloog-isl4_0.18.3-1 libcolamd2.8.0_1:4.2.1-3 libcomerr2_1.42.13-1 libcroco3_0.6.8-3 libcryptsetup4_2:1.6.6-5 libcsparse3.1.2_1:4.2.1-3 libcups2_2.1.0-4 libcupsfilters1_1.0.76-1 libcupsimage2_2.1.0-4 libcurl3_7.45.0-1 libcxsparse3.1.2_1:4.2.1-3 libdatrie1_0.2.9-3 libdb5.3_5.3.28-11 libdbus-1-3_1.10.0-3 libdebconfclient0_0.195 libdevmapper1.02.1_2:1.02.104-1 libdpkg-perl_1.18.3 libdrm-amdgpu1_2.4.64-1 libdrm-dev_2.4.64-1 libdrm-exynos1_2.4.64-1 libdrm-freedreno1_2.4.64-1 libdrm-nouveau2_2.4.64-1 libdrm-omap1_2.4.64-1 libdrm-radeon1_2.4.64-1 libdrm-tegra0_2.4.64-1 libdrm2_2.4.64-1 libedit2_3.1-20150325-1 libexpat1_2.1.0-7 libfakeroot_1.20.2-1 libfdisk1_2.27-3 libffi6_3.2.1-3 libfftw3-double3_3.3.4-2+rpi1 libfile-stripnondeterminism-perl_0.012-1 libfontconfig1_2.11.0-6.3 libfreetype6_2.6-2 libgc1c2_1:7.4.2-7 libgcc-4.9-dev_4.9.3-4 libgcc-5-dev_5.2.1-22+rpi1 libgcc1_1:5.2.1-22+rpi1 libgcrypt20_1.6.3-2 libgd3_2.1.1-4 libgdbm3_1.8.3-13.1 libgfortran3_5.2.1-22+rpi1 libgl1-mesa-dev_10.6.8-1 libgl1-mesa-glx_10.6.8-1 libglapi-mesa_10.6.8-1 libglib2.0-0_2.46.0-2 libglpk-dev_4.56-1 libglpk36_4.56-1 libglu1-mesa_9.0.0-2.1 libglu1-mesa-dev_9.0.0-2.1 libgmp-dev_2:6.0.0+dfsg-7+rpi1 libgmp10_2:6.0.0+dfsg-7+rpi1 libgmpxx4ldbl_2:6.0.0+dfsg-7+rpi1 libgnutls-deb0-28_3.3.18-1 libgomp1_5.2.1-22+rpi1 libgpg-error0_1.20-1 libgraphite2-3_1.3.3-1 libgs9_9.16~dfsg-2 libgs9-common_9.16~dfsg-2 libgsl0-dev_1.16+dfsg-4 libgsl0ldbl_1.16+dfsg-4 libgssapi-krb5-2_1.13.2+dfsg-2 libgstreamer-plugins-base1.0-0_1.6.0-1 libgstreamer1.0-0_1.6.0-1 libgvc6_2.38.0-10 libgvpr2_2.38.0-10 libharfbuzz-icu0_1.0.1-1+b1 libharfbuzz0b_1.0.1-1+b1 libhogweed4_3.1.1-4 libice6_2:1.0.9-1+b1 libicu-dev_55.1-5 libicu55_55.1-5 libidn11_1.32-3 libijs-0.35_0.35-11 libisl13_0.14-2 libjbig0_2.1-3.1 libjbig2dec0_0.12+20150918-1 libjpeg62-turbo_1:1.4.1-2 libjpeg8_8d1-2 libjsoncpp0v5_0.10.5-1 libk5crypto3_1.13.2+dfsg-2 libkeyutils1_1.5.9-8 libklibc_2.0.4-2+rpi1 libklu1.2.1_1:4.2.1-3 libkmod2_21-1 libkpathsea6_2015.20150524.37493-6 libkrb5-3_1.13.2+dfsg-2 libkrb5support0_1.13.2+dfsg-2 liblapack-dev_3.5.0-4 liblapack3_3.5.0-4 liblcms2-2_2.6-3 libldap-2.4-2_2.4.42+dfsg-2+rpi1 libldl2.1.0_1:4.2.1-3 libllvm3.5v5_1:3.5.2-2 liblocale-gettext-perl_1.07-1 liblqr-1-0_0.4.2-2 libltdl7_2.4.2-1.11 liblzma5_5.1.1alpha+20120614-2.1 liblzo2-2_2.08-1.2 libmagic1_1:5.25-2 libmagickcore-6.q16-2_8:6.8.9.9-6 libmagickwand-6.q16-2_8:6.8.9.9-6 libmng1_1.0.10+dfsg-3.1 libmount1_2.27-3 libmpc3_1.0.3-1 libmpfr4_3.1.3-1 libncurses5_6.0+20150810-1 libncursesw5_6.0+20150810-1 libnettle6_3.1.1-4 libnghttp2-14_1.3.2-0.1 libnih-dbus1_1.0.3-4.3 libnih1_1.0.3-4.3 libobjc-5-dev_5.2.1-22+rpi1 libobjc4_5.2.1-22+rpi1 libopenjpeg5_1:1.5.2-3.1 liborc-0.4-0_1:0.4.24-1 libp11-kit0_0.23.1-3 libpam-modules_1.1.8-3.1 libpam-modules-bin_1.1.8-3.1 libpam-runtime_1.1.8-3.1 libpam0g_1.1.8-3.1 libpango-1.0-0_1.38.0-3 libpangocairo-1.0-0_1.38.0-3 libpangoft2-1.0-0_1.38.0-3 libpaper-utils_1.1.24+nmu4 libpaper1_1.1.24+nmu4 libpathplan4_2.38.0-10 libpcre3_2:8.35-7.2 libpipeline1_1.4.1-1 libpixman-1-0_0.33.2-2 libpng12-0_1.2.50-2+b2 libpoppler46_0.26.5-4 libpotrace0_1.12-1 libprocps3_2:3.3.9-9 libprocps4_2:3.3.10-2 libptexenc1_2015.20150524.37493-6 libpthread-stubs0-dev_0.3-4 libpython-stdlib_2.7.9-1 libpython2.7-minimal_2.7.10-5 libpython2.7-stdlib_2.7.10-5 libqt4-dbus_4:4.8.7+dfsg-3+rpi1 libqt4-declarative_4:4.8.7+dfsg-3+rpi1 libqt4-designer_4:4.8.7+dfsg-3+rpi1 libqt4-dev_4:4.8.7+dfsg-3+rpi1 libqt4-dev-bin_4:4.8.7+dfsg-3+rpi1 libqt4-help_4:4.8.7+dfsg-3+rpi1 libqt4-network_4:4.8.7+dfsg-3+rpi1 libqt4-opengl_4:4.8.7+dfsg-3+rpi1 libqt4-opengl-dev_4:4.8.7+dfsg-3+rpi1 libqt4-qt3support_4:4.8.7+dfsg-3+rpi1 libqt4-script_4:4.8.7+dfsg-3+rpi1 libqt4-scripttools_4:4.8.7+dfsg-3+rpi1 libqt4-sql_4:4.8.7+dfsg-3+rpi1 libqt4-svg_4:4.8.7+dfsg-3+rpi1 libqt4-test_4:4.8.7+dfsg-3+rpi1 libqt4-xml_4:4.8.7+dfsg-3+rpi1 libqt4-xmlpatterns_4:4.8.7+dfsg-3+rpi1 libqtcore4_4:4.8.7+dfsg-3+rpi1 libqtdbus4_4:4.8.7+dfsg-3+rpi1 libqtgui4_4:4.8.7+dfsg-3+rpi1 libqtwebkit-dev_2.3.4.dfsg-5 libqtwebkit4_2.3.4.dfsg-5 libreadline6_6.3-8+b3 librtmp1_2.4+20150115.gita107cef-1+b1 libsasl2-2_2.1.26.dfsg1-14 libsasl2-modules-db_2.1.26.dfsg1-14 libseccomp2_2.2.3-2 libselinux1_2.3-2 libsemanage-common_2.3-1 libsemanage1_2.3-1 libsepol1_2.3-2 libslang2_2.3.0-2+b1 libsm6_2:1.2.2-1+b1 libsmartcols1_2.27-3 libspqr1.3.1_1:4.2.1-3 libsqlite3-0_3.8.11.1-1 libss2_1.42.13-1 libssh2-1_1.5.0-2 libssl1.0.0_1.0.2d-1 libstdc++-4.9-dev_4.9.3-4 libstdc++-5-dev_5.2.1-22+rpi1 libstdc++6_5.2.1-22+rpi1 libsuitesparse-dev_1:4.2.1-3 libsvm-dev_3.12-1.1 libsvm3_3.12-1.1 libsynctex1_2015.20150524.37493-6 libsystemd0_227-2 libtasn1-6_4.7-2 libtexlua52_2015.20150524.37493-6 libtexluajit2_2015.20150524.37493-6 libtext-charwidth-perl_0.04-7+b4 libtext-iconv-perl_1.7-5+b5 libtext-wrapi18n-perl_0.06-7.1 libthai-data_0.1.22-2 libthai0_0.1.22-2 libtiff5_4.0.5-1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20150810-1 libtinyxml2-2_2.2.0-1.1 libtrio2_1.16+dfsg1-3 libubsan0_5.2.1-22+rpi1 libudev1_227-2 libumfpack5.6.2_1:4.2.1-3 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-27 libustr-1.0-1_1.0.4-5 libuuid1_2.27-3 libvpx2_1.4.0-4+rpi1 libx11-6_2:1.6.3-1 libx11-data_2:1.6.3-1 libx11-dev_2:1.6.3-1 libx11-xcb-dev_2:1.6.3-1 libx11-xcb1_2:1.6.3-1 libxapian22v5_1.2.21-1.2 libxau-dev_1:1.0.8-1 libxau6_1:1.0.8-1 libxaw7_2:1.0.13-1 libxcb-dri2-0_1.10-3+b1 libxcb-dri2-0-dev_1.10-3+b1 libxcb-dri3-0_1.10-3+b1 libxcb-dri3-dev_1.10-3+b1 libxcb-glx0_1.10-3+b1 libxcb-glx0-dev_1.10-3+b1 libxcb-present-dev_1.10-3+b1 libxcb-present0_1.10-3+b1 libxcb-randr0_1.10-3+b1 libxcb-randr0-dev_1.10-3+b1 libxcb-render0_1.10-3+b1 libxcb-render0-dev_1.10-3+b1 libxcb-shape0_1.10-3+b1 libxcb-shape0-dev_1.10-3+b1 libxcb-shm0_1.10-3+b1 libxcb-sync-dev_1.10-3+b1 libxcb-sync1_1.10-3+b1 libxcb-xfixes0_1.10-3+b1 libxcb-xfixes0-dev_1.10-3+b1 libxcb1_1.10-3+b1 libxcb1-dev_1.10-3+b1 libxdamage-dev_1:1.1.4-2+b1 libxdamage1_1:1.1.4-2+b1 libxdmcp-dev_1:1.1.2-1 libxdmcp6_1:1.1.2-1 libxdot4_2.38.0-10 libxerces-c-dev_3.1.1-5.1+b1 libxerces-c3.1_3.1.1-5.1+b1 libxext-dev_2:1.3.3-1 libxext6_2:1.3.3-1 libxfixes-dev_1:5.0.1-2+b2 libxfixes3_1:5.0.1-2+b2 libxi6_2:1.7.4-1+b2 libxml2_2.9.2+zdfsg1-4 libxmu6_2:1.1.2-1 libxpm4_1:3.5.11-1+b1 libxrender1_1:0.9.8-1+b1 libxshmfence-dev_1.2-1 libxshmfence1_1.2-1 libxt6_1:1.1.4-1+b1 libxxf86vm-dev_1:1.1.4-1 libxxf86vm1_1:1.1.4-1 libzzip-0-13_0.13.62-3 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3 lsb-base_4.1+Debian13+rpi1+nmu1 make_4.0-8.2 makedev_2.3.1-93 man-db_2.7.4-1 mawk_1.3.3-17 mesa-common-dev_10.6.8-1 mime-support_3.59 mount_2.27-3 multiarch-support_2.19-22 nano_2.4.2-1 ncurses-base_6.0+20150810-1 ncurses-bin_6.0+20150810-1 passwd_1:4.2-3 patch_2.7.5-1 perl_5.20.2-6 perl-base_5.20.2-6 perl-modules_5.20.2-6 po-debconf_1.0.18 poppler-data_0.4.7-3 preview-latex-style_11.87-3+deb8u1 procps_2:3.3.10-2 python_2.7.9-1 python-minimal_2.7.9-1 python-pygments_2.0.1+dfsg-1.1 python2.7_2.7.10-5 python2.7-minimal_2.7.10-5 qdbus_4:4.8.7+dfsg-3+rpi1 qt4-linguist-tools_4:4.8.7+dfsg-3+rpi1 qt4-qmake_4:4.8.7+dfsg-3+rpi1 qtchooser_52-gae5eeef-2 qtcore4-l10n_4:4.8.7+dfsg-3+rpi1 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-openms-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 seqan-dev_1.4.1+dfsg-2 startpar_0.59-3 systemd_227-2 systemd-sysv_227-2 sysv-rc_2.88dsf-59.2 sysvinit-utils_2.88dsf-59.2 t1utils_1.38-4 tar_1.28-1 tex-common_6.03 texlive-base_2015.20150917-1 texlive-binaries_2015.20150524.37493-6 texlive-extra-utils_2015.20150917-1 texlive-font-utils_2015.20150917-1 texlive-fonts-recommended_2015.20150917-1 texlive-latex-base_2015.20150917-1 texlive-latex-extra_2015.20150917-1 texlive-latex-recommended_2015.20150917-1 texlive-pictures_2015.20150917-1 tzdata_2015g-1 ucf_3.0030 udev_227-2 util-linux_2.27-3 x11-common_1:7.7+9 x11proto-core-dev_7.0.27-1 x11proto-damage-dev_1:1.2.1-2 x11proto-dri2-dev_2.8-2 x11proto-fixes-dev_1:5.0-2 x11proto-gl-dev_1.4.17-1 x11proto-input-dev_2.3.1-1 x11proto-kb-dev_1.0.6-2 x11proto-xext-dev_7.3.0-1 x11proto-xf86vidmode-dev_2.3.1-2 xdg-utils_1.1.1-1 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1 zlib1g-dev_1:1.2.8.dfsg-2+b1

┌──────────────────────────────────────────────────────────────────────────────┐
│ Build                                                                        │
└──────────────────────────────────────────────────────────────────────────────┘


Unpack source
─────────────

gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Mon Aug 18 14:48:56 2014 UTC using RSA key ID 7694CF42
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./openms_1.11.1-5.dsc
dpkg-source: info: extracting openms in openms-1.11.1
dpkg-source: info: unpacking openms_1.11.1.orig.tar.bz2
dpkg-source: info: unpacking openms_1.11.1-5.debian.tar.xz
dpkg-source: info: applying doc-path-for-debian.patch
dpkg-source: info: applying debian-specific-build-config.patch
dpkg-source: info: applying user-manual-latex-code-fix-doxygen-problem

Check disc space
────────────────

Sufficient free space for build

Hack binNMU version
───────────────────

Created changelog entry for binNMU version 1.11.1-5+b1

User Environment
────────────────

DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-81ea3d63-f537-4f9c-928d-1a926fb16e0f
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
─────────────────

dpkg-buildpackage: source package openms
dpkg-buildpackage: source version 1.11.1-5+b1
dpkg-buildpackage: source distribution stretch-staging
 dpkg-source --before-build openms-1.11.1
dpkg-buildpackage: host architecture armhf
 fakeroot debian/rules clean
"---------------------------------------"
NUMJOBS: 
MAKEFLAGS: 
DEB_BUILD_OPTIONS: parallel=4
"---------------------------------------"
dh_testdir
dh_testroot
dh_clean
	rm -f debian/libopenms1.11.substvars
	rm -f debian/libopenms1.11.*.debhelper
	rm -rf debian/libopenms1.11/
	rm -f debian/libopenms-dev.substvars
	rm -f debian/libopenms-dev.*.debhelper
	rm -rf debian/libopenms-dev/
	rm -f debian/topp.substvars
	rm -f debian/topp.*.debhelper
	rm -rf debian/topp/
	rm -f debian/openms-common.substvars
	rm -f debian/openms-common.*.debhelper
	rm -rf debian/openms-common/
	rm -f debian/openms-doc.substvars
	rm -f debian/openms-doc.*.debhelper
	rm -rf debian/openms-doc/
	rm -f debian/openms.substvars
	rm -f debian/openms.*.debhelper
	rm -rf debian/openms/
	rm -rf debian/.debhelper/
	rm -f debian/*.debhelper.log
	rm -f debian/files
	find .  \( \( \
		\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS \) -prune -o -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} + \) -o \
		\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
	rm -f *-stamp
rm -rf /«PKGBUILDDIR»/debian/build
rm -f debian/TOPPAS.xpm
rm -f debian/TOPPView.xpm
rm -f debian/topp.1
 debian/rules build-arch
"---------------------------------------"
NUMJOBS: 
MAKEFLAGS: 
DEB_BUILD_OPTIONS: parallel=4
"---------------------------------------"
dh_testdir
dh_prep -a
	rm -f debian/libopenms1.11.substvars
	rm -f debian/libopenms1.11.*.debhelper
	rm -rf debian/libopenms1.11/
	rm -f debian/libopenms-dev.substvars
	rm -f debian/libopenms-dev.*.debhelper
	rm -rf debian/libopenms-dev/
	rm -f debian/topp.substvars
	rm -f debian/topp.*.debhelper
	rm -rf debian/topp/
mkdir -p /«PKGBUILDDIR»/debian/build
DEB_BUILD_GNU_TYPE: arm-linux-gnueabihf
DEB_HOST_MULTIARCH: arm-linux-gnueabihf
cd /«PKGBUILDDIR»/debian/build && \
 /usr/bin/cmake -DCMAKE_FIND_LIBRARY_SUFFIXES=".so" \
 -DCONTRIB_LIB_DIR="/usr/lib;/usr/lib/arm-linux-gnueabihf;/lib/arm-linux-gnueabihf;/usr/lib/arm-linux-gnueabihf;/lib/arm-linux-gnueabihf" \
 -DCF_OPENMS_DATA_PATH=/usr/share/openms-common/OpenMS/ \
 -DCF_OPENMS_DOC_PATH=/usr/share/doc/openms-doc/ \
 -DCMAKE_BUILD_TYPE=release \
 -DDEBIAN_BUILD=ON -DBOOST_USE_STATIC=OFF ../.. 
-- The C compiler identification is GNU 5.2.1
-- The CXX compiler identification is GNU 5.2.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Architecture: 32 bit
-- Performing Test WITH_FPIC
-- Performing Test WITH_FPIC - Success
-- Compiler checks for conversion: OFF
-- [GCC only] STL debug mode: OFF
-- NVIDIA CUDA: OFF
-- Intel TBB: OFF
-- Try OpenMP C flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Try OpenMP CXX flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Found OpenMP: -fopenmp  
-- OPENMP: ON
-- CMake find root path: /«PKGBUILDDIR»/contrib;/opt/local;/usr/local
-- Contrib search directories:  /«PKGBUILDDIR»/contrib;/opt/local;/usr/local
-- Contrib library directories: /usr/lib;/usr/lib/arm-linux-gnueabihf;/lib/arm-linux-gnueabihf;/usr/lib/arm-linux-gnueabihf;/lib/arm-linux-gnueabihf;/«PKGBUILDDIR»/contrib/lib/;/opt/local/lib/;/usr/local/lib/
-- Contrib include directories: /«PKGBUILDDIR»/contrib/include/;/opt/local/include/;/usr/local/include/
CMake Warning (dev) at cmake/OpenMSBuildSystem_macros.cmake:10 (if):
  Policy CMP0054 is not set: Only interpret if() arguments as variables or
  keywords when unquoted.  Run "cmake --help-policy CMP0054" for policy
  details.  Use the cmake_policy command to set the policy and suppress this
  warning.

  Quoted variables like "CONTRIB_XERCESC_OPT" will no longer be dereferenced
  when the policy is set to NEW.  Since the policy is not set the OLD
  behavior will be used.
Call Stack (most recent call first):
  cmake/OpenMSBuildSystem_externalLibs.cmake:58 (OPENMS_CHECKLIB)
  CMakeLists.txt:252 (include)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found xerces_c library (Release) at: /usr/lib/arm-linux-gnueabihf/libxerces-c.so
CMake Warning (dev) at cmake/OpenMSBuildSystem_macros.cmake:18 (if):
  Policy CMP0054 is not set: Only interpret if() arguments as variables or
  keywords when unquoted.  Run "cmake --help-policy CMP0054" for policy
  details.  Use the cmake_policy command to set the policy and suppress this
  warning.

  Quoted variables like "CONTRIB_XERCESC_DBG" will no longer be dereferenced
  when the policy is set to NEW.  Since the policy is not set the OLD
  behavior will be used.
Call Stack (most recent call first):
  cmake/OpenMSBuildSystem_externalLibs.cmake:58 (OPENMS_CHECKLIB)
  CMakeLists.txt:252 (include)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found xerces_c library (Debug) at: /usr/lib/arm-linux-gnueabihf/libxerces-c.so
-- Found GSL: /usr/include/gsl  
-- Found GSL version 1.16
-- Boost version: 1.58.0
-- Found the following Boost libraries:
--   iostreams
--   date_time
--   math_c99
--   regex
-- Found Boost version 1.58.0
-- Found SEQAN version 1.4.1
-- Looking for math.h
-- Looking for math.h - found
-- Found LibSVM: /usr/lib/libsvm.so  
-- Found LibSVM version 3.1.2
-- Found GLPK: /usr/lib/arm-linux-gnueabihf/libglpk.so  
-- Found GLPK version 4.56
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.8") 
-- Found zlib version 1.2.8
-- Found BZip2: /usr/lib/arm-linux-gnueabihf/libbz2.so (found version "1.0.6") 
-- Looking for BZ2_bzCompressInit in /usr/lib/arm-linux-gnueabihf/libbz2.so
-- Looking for BZ2_bzCompressInit in /usr/lib/arm-linux-gnueabihf/libbz2.so - found
-- Found bzip2 version 1.0.6
-- Not trying to find Phonon explicitly... If you run into trouble with Qt Phonon, try to enable it in build system
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - found
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - not found
-- Found Qt4: /usr/bin/qmake (found suitable version "4.8.7", minimum required is "4.5.0") 
-- Info: The programm svnversion could not be found. SVN-revision information will not be available! Add the location of svnversion(.exe) to your PATH environment variable if you require SVN-revision.
-- SVN revision information enabled. Use 'ENABLE_SVN=OFF' to disable!
-- Info: CF_OPENMS_DATA_PATH: /usr/share/openms-common/OpenMS/
-- Info: CF_OPENMS_DOC_PATH: /usr/share/doc/openms-doc/
-- Check if the system is big endian
-- Searching 16 bit integer
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Using unsigned short
-- Check if the system is big endian - little endian
-- Check size of unsigned char
-- Check size of unsigned char - done
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Check size of unsigned int
-- Check size of unsigned int - done
-- Check size of unsigned long
-- Check size of unsigned long - done
-- Check size of unsigned long long
-- Check size of unsigned long long - done
-- Check size of short
-- Check size of short - done
-- Check size of int
-- Check size of int - done
-- Check size of long
-- Check size of long - done
-- Check size of long long
-- Check size of long long - done
-- Check size of int32_t
-- Check size of int32_t - done
-- Check size of int64_t
-- Check size of int64_t - done
-- Check size of uint8_t
-- Check size of uint8_t - done
-- Check size of uint64_t
-- Check size of uint64_t - done
-- Looking for C++ include unistd.h
-- Looking for C++ include unistd.h - found
-- Looking for C++ include process.h
-- Looking for C++ include process.h - not found
-- Looking for C++ include time.h
-- Looking for C++ include time.h - found
-- Looking for C++ include sys/types.h
-- Looking for C++ include sys/types.h - found
-- Looking for C++ include sys/times.h
-- Looking for C++ include sys/times.h - found
-- Looking for C++ include sys/time.h
-- Looking for C++ include sys/time.h - found
-- Looking for C++ include stdint.h
-- Looking for C++ include stdint.h - found
-- Looking for kill
-- Looking for kill - found
-- Looking for sysconf
-- Looking for sysconf - found
-- Searching for MS2 search engines ...
--   - OMSSA not found
--   - X!Tandem not found
--   - Myrimatch not found
-- Found Doxygen: /usr/bin/doxygen (found version "1.8.9.1") 
-- No resource file (/«PKGBUILDDIR»/source/VISUAL/APPLICATIONS/GUITOOLS/IDEvaluatorGUI.rc) found for IDEvaluatorGUI. No icon will be embedded.
-- No resource file (/«PKGBUILDDIR»/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.rc) found for INIFileEditor. No icon will be embedded.
-- No resource file (/«PKGBUILDDIR»/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.rc) found for TOPPAS. No icon will be embedded.
-- No resource file (/«PKGBUILDDIR»/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.rc) found for TOPPView. No icon will be embedded.
-- Official Debian packaging recognized
-- CMAKE_SKIP_RPATH: TRUE
-- 
-- -----------------------------------------------------------------
-- 
-- You have successfully configured OpenMS and TOPP.
-- 
-- For a full list of make targets execute:
-- 'make targets'
-- 
-- -----------------------------------------------------------------
-- 
CMake Warning at CMakeLists.txt:644 (export):
  Cannot create package registry file:

    /sbuild-nonexistent/.cmake/packages/OpenMS/bcbda3266a88727fd83352275e636dfd

  No such file or directory



-- Configuring done
-- Generating done
-- Build files have been written to: /«PKGBUILDDIR»/debian/build
VERBOSE=1 /usr/bin/make -C /«PKGBUILDDIR»/debian/build \
OpenMS TOPP UTILS GUI test_build Tutorials_build 
make[1]: Entering directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/cmake -H/«PKGBUILDDIR» -B/«PKGBUILDDIR»/debian/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/make -f CMakeFiles/Makefile2 OpenMS
make[2]: Entering directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/cmake -H/«PKGBUILDDIR» -B/«PKGBUILDDIR»/debian/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /«PKGBUILDDIR»/debian/build/CMakeFiles 25
/usr/bin/make -f CMakeFiles/Makefile2 CMakeFiles/OpenMS.dir/all
make[3]: Entering directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/make -f source/TEST/CMakeFiles/svn_revision_update_forTests.dir/build.make source/TEST/CMakeFiles/svn_revision_update_forTests.dir/depend
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
cd /«PKGBUILDDIR»/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«PKGBUILDDIR» /«PKGBUILDDIR»/source/TEST /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build/source/TEST /«PKGBUILDDIR»/debian/build/source/TEST/CMakeFiles/svn_revision_update_forTests.dir/DependInfo.cmake --color=
Dependee "/«PKGBUILDDIR»/debian/build/source/TEST/CMakeFiles/svn_revision_update_forTests.dir/DependInfo.cmake" is newer than depender "/«PKGBUILDDIR»/debian/build/source/TEST/CMakeFiles/svn_revision_update_forTests.dir/depend.internal".
Dependee "/«PKGBUILDDIR»/debian/build/source/TEST/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/«PKGBUILDDIR»/debian/build/source/TEST/CMakeFiles/svn_revision_update_forTests.dir/depend.internal".
Scanning dependencies of target svn_revision_update_forTests
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/make -f source/TEST/CMakeFiles/svn_revision_update_forTests.dir/build.make source/TEST/CMakeFiles/svn_revision_update_forTests.dir/build
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
cd /«PKGBUILDDIR»/debian/build/source/TEST && /usr/bin/cmake -DSOURCE_DIR=/«PKGBUILDDIR»/source/TEST -DSVN_REVISION_FILE=/«PKGBUILDDIR»/debian/build/include/OpenMS/openms_svn_revision.h -DOPENMS_HAS_SVNVERSION=OFF -DSVNVERSION_EXECUTABLE=SVNVERSION_EXECUTABLE-NOTFOUND -P /«PKGBUILDDIR»/source/TEST/../../cmake/svnversion.cmake
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
[  0%] Built target svn_revision_update_forTests
/usr/bin/make -f CMakeFiles/svn_revision_update.dir/build.make CMakeFiles/svn_revision_update.dir/depend
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
cd /«PKGBUILDDIR»/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«PKGBUILDDIR» /«PKGBUILDDIR» /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build/CMakeFiles/svn_revision_update.dir/DependInfo.cmake --color=
Dependee "/«PKGBUILDDIR»/debian/build/CMakeFiles/svn_revision_update.dir/DependInfo.cmake" is newer than depender "/«PKGBUILDDIR»/debian/build/CMakeFiles/svn_revision_update.dir/depend.internal".
Dependee "/«PKGBUILDDIR»/debian/build/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/«PKGBUILDDIR»/debian/build/CMakeFiles/svn_revision_update.dir/depend.internal".
Scanning dependencies of target svn_revision_update
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/make -f CMakeFiles/svn_revision_update.dir/build.make CMakeFiles/svn_revision_update.dir/build
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/cmake -DSOURCE_DIR=/«PKGBUILDDIR» -DSVN_REVISION_FILE=/«PKGBUILDDIR»/debian/build/include/OpenMS/openms_svn_revision.h -DOPENMS_HAS_SVNVERSION=OFF -DSVNVERSION_EXECUTABLE=SVNVERSION_EXECUTABLE-NOTFOUND -DENABLE_SVN=ON -P /«PKGBUILDDIR»/cmake/svnversion.cmake
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
[  0%] Built target svn_revision_update
/usr/bin/make -f CMakeFiles/OpenSwathAlgo.dir/build.make CMakeFiles/OpenSwathAlgo.dir/depend
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
cd /«PKGBUILDDIR»/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«PKGBUILDDIR» /«PKGBUILDDIR» /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake --color=
Dependee "/«PKGBUILDDIR»/debian/build/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake" is newer than depender "/«PKGBUILDDIR»/debian/build/CMakeFiles/OpenSwathAlgo.dir/depend.internal".
Dependee "/«PKGBUILDDIR»/debian/build/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/«PKGBUILDDIR»/debian/build/CMakeFiles/OpenSwathAlgo.dir/depend.internal".
Scanning dependencies of target OpenSwathAlgo
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/make -f CMakeFiles/OpenSwathAlgo.dir/build.make CMakeFiles/OpenSwathAlgo.dir/build
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
[  0%] Building CXX object CMakeFiles/OpenSwathAlgo.dir/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/Scoring.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/Scoring.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/Scoring.C
[  0%] Building CXX object CMakeFiles/OpenSwathAlgo.dir/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/MRMScoring.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/MRMScoring.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/MRMScoring.C
[  0%] Building CXX object CMakeFiles/OpenSwathAlgo.dir/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/StatsHelpers.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/StatsHelpers.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/StatsHelpers.C
[  0%] Building CXX object CMakeFiles/OpenSwathAlgo.dir/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.C
[  0%] Building CXX object CMakeFiles/OpenSwathAlgo.dir/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.C.o
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[  4%] Building CXX object CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.C.o
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[ 12%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.C.o
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[ 12%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.C.o
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[ 12%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.C.o
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[ 12%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.C.o
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[ 12%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.C.o
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[ 12%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.C.o
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[ 12%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.C.o
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[ 16%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.C.o
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[ 16%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.C.o
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[ 16%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DoubleList.C.o
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[ 16%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.C.o
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[ 16%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/SparseVector.C.o
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[ 16%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.C.o
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[ 16%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/SuffixArray.C.o
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[ 16%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.C.o
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[ 16%] Building CXX object CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.C.o
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[ 20%] Building CXX object CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.C.o
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/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.C.o -c /«PKGBUILDDIR»/source/METADATA/SampleTreatment.C
[ 24%] Building CXX object CMakeFiles/OpenMS.dir/source/METADATA/Software.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/METADATA/Software.C.o -c /«PKGBUILDDIR»/source/METADATA/Software.C
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[ 24%] Building CXX object CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.C.o
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[ 24%] Building CXX object CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.C.o
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[ 24%] Building CXX object CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.C.o
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[ 28%] Building CXX object CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.C.o
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/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.C.o -c /«PKGBUILDDIR»/source/CHEMISTRY/AASequence.C
[ 28%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/EdwardsLippertIterator.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EdwardsLippertIterator.C.o -c /«PKGBUILDDIR»/source/CHEMISTRY/EdwardsLippertIterator.C
/«PKGBUILDDIR»/source/CHEMISTRY/EdwardsLippertIterator.C: In copy constructor 'OpenMS::EdwardsLippertIterator::EdwardsLippertIterator(const OpenMS::EdwardsLippertIterator&)':
/«PKGBUILDDIR»/source/CHEMISTRY/EdwardsLippertIterator.C:134:34: warning: iteration 255u invokes undefined behavior [-Waggressive-loop-optimizations]
       masse_[i] = source.masse_[i];
                                  ^
/«PKGBUILDDIR»/source/CHEMISTRY/EdwardsLippertIterator.C:132:24: note: containing loop
     for (Size i = 0; i < 256; i++)
                        ^
[ 28%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/EdwardsLippertIteratorTryptic.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EdwardsLippertIteratorTryptic.C.o -c /«PKGBUILDDIR»/source/CHEMISTRY/EdwardsLippertIteratorTryptic.C
[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.C.o -c /«PKGBUILDDIR»/source/CHEMISTRY/Element.C
[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.C.o -c /«PKGBUILDDIR»/source/CHEMISTRY/ElementDB.C
[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.C.o -c /«PKGBUILDDIR»/source/CHEMISTRY/EmpiricalFormula.C
[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.C.o -c /«PKGBUILDDIR»/source/CHEMISTRY/EnzymaticDigestion.C
[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/IsotopeDistribution.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/IsotopeDistribution.C.o -c /«PKGBUILDDIR»/source/CHEMISTRY/IsotopeDistribution.C
[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.C.o -c /«PKGBUILDDIR»/source/CHEMISTRY/ModificationDefinition.C
[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.C.o -c /«PKGBUILDDIR»/source/CHEMISTRY/ModificationDefinitionsSet.C
[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.C.o -c /«PKGBUILDDIR»/source/CHEMISTRY/ModificationsDB.C
[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifierRep.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifierRep.C.o -c /«PKGBUILDDIR»/source/CHEMISTRY/ModifierRep.C
[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/PepIterator.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/PepIterator.C.o -c /«PKGBUILDDIR»/source/CHEMISTRY/PepIterator.C
[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.C.o
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.C.o
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.C.o
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.C.o
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.C.o
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.C.o
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.C.o
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/TrypticIterator.C.o
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.C.o
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.C.o
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.C.o
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.C.o
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[ 36%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.C.o
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[ 36%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.C.o -c /«PKGBUILDDIR»/source/FORMAT/HANDLERS/MzIdentMLHandler.C
[ 36%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.C.o
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[ 36%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.C.o -c /«PKGBUILDDIR»/source/FORMAT/HANDLERS/MzMLHandler.C
[ 36%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.C.o
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[ 36%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.C.o
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[ 36%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.C.o -c /«PKGBUILDDIR»/source/FORMAT/HANDLERS/ParamXMLHandler.C
[ 36%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.C.o -c /«PKGBUILDDIR»/source/FORMAT/HANDLERS/ToolDescriptionHandler.C
[ 36%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.C.o -c /«PKGBUILDDIR»/source/FORMAT/HANDLERS/TraMLHandler.C
[ 36%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.C.o
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[ 36%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.C.o -c /«PKGBUILDDIR»/source/FORMAT/HANDLERS/XMLHandler.C
[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XTandemInfileXMLHandler.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XTandemInfileXMLHandler.C.o -c /«PKGBUILDDIR»/source/FORMAT/HANDLERS/XTandemInfileXMLHandler.C
[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.C.o
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[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.C.o
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[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.C.o
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[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.C.o
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[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.C.o
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[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.C.o
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[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/Base64.C.o
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[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.C.o
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[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.C.o
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[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.C.o
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[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.C.o
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[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.C.o
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[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.C.o
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[ 40%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.C.o
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[ 44%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/FastaIterator.C.o
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[ 44%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/FastaIteratorIntern.C.o
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[ 44%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.C.o
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[ 44%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.C.o
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[ 44%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.C.o
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[ 44%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.C.o
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[ 44%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.C.o
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[ 44%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.C.o
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[ 44%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.C.o
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[ 48%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.C.o -c /«PKGBUILDDIR»/source/FORMAT/ToolDescriptionFile.C
[ 48%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.C.o -c /«PKGBUILDDIR»/source/FORMAT/TransformationXMLFile.C
[ 48%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.C.o -c /«PKGBUILDDIR»/source/FORMAT/UnimodXMLFile.C
[ 48%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.C.o -c /«PKGBUILDDIR»/source/FORMAT/XMassFile.C
[ 48%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.C.o -c /«PKGBUILDDIR»/source/FORMAT/XMLFile.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.C.o -c /«PKGBUILDDIR»/source/FORMAT/XTandemInfile.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.C.o -c /«PKGBUILDDIR»/source/FORMAT/XTandemXMLFile.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.C.o -c /«PKGBUILDDIR»/source/FORMAT/MzIdentMLFile.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.C.o -c /«PKGBUILDDIR»/source/FORMAT/MzQuantMLFile.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.C.o -c /«PKGBUILDDIR»/source/FORMAT/QcMLFile.C
/«PKGBUILDDIR»/source/FORMAT/QcMLFile.C:1248:61: warning: trigraph ??/ ignored, use -trigraphs to enable [-Wtrigraphs]
     os <<  "\t<cv uri=\"http://www.???.cvs.sourceforge.net/???/qc-cv.obo\" id=\"qc_cv_ref\" fullName=\"MS-QC\" version=\"x.y.z\"/>\n";
                                                             ^
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.C.o -c /«PKGBUILDDIR»/source/FORMAT/TraMLFile.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqChannelExtractor.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqChannelExtractor.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/ItraqChannelExtractor.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/ItraqConstants.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqQuantifier.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqQuantifier.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/ItraqQuantifier.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/ProteinInference.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/ProteinResolver.C
/«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/ProteinResolver.C: In member function 'void OpenMS::ProteinResolver::resolveID(std::vector<OpenMS::PeptideIdentification>&)':
/«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/ProteinResolver.C:120:10: warning: variable 'found_peptides' set but not used [-Wunused-but-set-variable]
     Size found_peptides;
          ^
/«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/ProteinResolver.C: In member function 'void OpenMS::ProteinResolver::resolveConsensus(OpenMS::ConsensusMap&)':
/«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/ProteinResolver.C:162:10: warning: variable 'found_peptides' set but not used [-Wunused-but-set-variable]
     Size found_peptides;
          ^
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.C.o
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[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.C
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.C.o
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[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.C.o
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[ 56%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.C
[ 56%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C
/«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C: In member function 'virtual void OpenMS::PoseClusteringAffineSuperimposer::run(const OpenMS::ConsensusMap&, const OpenMS::ConsensusMap&, OpenMS::TransformationDescription&)':
/«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C:713:16: warning: variable 'rt_low_low' set but not used [-Wunused-but-set-variable]
     DoubleReal rt_low_low;
                ^
/«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C:715:16: warning: variable 'rt_low_high' set but not used [-Wunused-but-set-variable]
     DoubleReal rt_low_high;
                ^
/«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C:716:16: warning: variable 'rt_high_low' set but not used [-Wunused-but-set-variable]
     DoubleReal rt_high_low;
                ^
/«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C:718:16: warning: variable 'rt_high_high' set but not used [-Wunused-but-set-variable]
     DoubleReal rt_high_high;
                ^
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.C
/«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.C: In member function 'virtual void OpenMS::PoseClusteringShiftSuperimposer::run(const OpenMS::ConsensusMap&, const OpenMS::ConsensusMap&, OpenMS::TransformationDescription&)':
/«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.C:344:16: warning: variable 'shift_low' set but not used [-Wunused-but-set-variable]
     DoubleReal shift_low;
                ^
/«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.C:346:16: warning: variable 'shift_high' set but not used [-Wunused-but-set-variable]
     DoubleReal shift_high;
                ^
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/QTClusterFinder.C
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/SimplePairFinder.C
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/StablePairFinder.C
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/TransformationDescription.C
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/MAPMATCHING/TransformationModel.C
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/DECHARGING/FeatureDeconvolution.C
/«PKGBUILDDIR»/source/ANALYSIS/DECHARGING/FeatureDeconvolution.C: In member function 'void OpenMS::FeatureDeconvolution::compute(const FeatureMapType&, OpenMS::FeatureDeconvolution::FeatureMapType&, OpenMS::ConsensusMap&, OpenMS::ConsensusMap&)':
/«PKGBUILDDIR»/source/ANALYSIS/DECHARGING/FeatureDeconvolution.C:708:39: warning: typedef 'MapCI' locally defined but not used [-Wunused-local-typedefs]
     typedef CliqueMap::const_iterator MapCI;
                                       ^
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/DECHARGING/ILPDCWrapper.C
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/ID/AccurateMassSearchEngine.C
In file included from /«PKGBUILDDIR»/source/ANALYSIS/ID/AccurateMassSearchEngine.C:35:0:
/«PKGBUILDDIR»/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h: In copy constructor 'OpenMS::AccurateMassSearchResult::AccurateMassSearchResult(const OpenMS::AccurateMassSearchResult&)':
/«PKGBUILDDIR»/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:152:14: warning: 'OpenMS::AccurateMassSearchResult::source_feature_index_' will be initialized after [-Wreorder]
         Size source_feature_index_;
              ^
/«PKGBUILDDIR»/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:151:14: warning:   'OpenMS::Size OpenMS::AccurateMassSearchResult::matching_index_' [-Wreorder]
         Size matching_index_;
              ^
/«PKGBUILDDIR»/source/ANALYSIS/ID/AccurateMassSearchEngine.C:84:1: warning:   when initialized here [-Wreorder]
 AccurateMassSearchResult::AccurateMassSearchResult(const AccurateMassSearchResult& source) :
 ^
/«PKGBUILDDIR»/source/ANALYSIS/ID/AccurateMassSearchEngine.C: At global scope:
/«PKGBUILDDIR»/source/ANALYSIS/ID/AccurateMassSearchEngine.C:1179:65: warning: unused parameter 'addstr' [-Wunused-parameter]
 void AccurateMassSearchEngine::parseAdductString_(const String& addstr, std::vector<String>& components)
                                                                 ^
/«PKGBUILDDIR»/source/ANALYSIS/ID/AccurateMassSearchEngine.C:1179:94: warning: unused parameter 'components' [-Wunused-parameter]
 void AccurateMassSearchEngine::parseAdductString_(const String& addstr, std::vector<String>& components)
                                                                                              ^
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.C.o
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[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusID.C.o
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[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.C.o
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[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.C.o
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[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.C.o
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[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.C.o
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[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.C.o
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[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PILISIdentification.C.o
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[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PILISModel.C.o
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[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PILISModelGenerator.C.o
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[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PILISNeutralLossModel.C.o
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[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PILISScoring.C.o
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[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PILISCrossValidation.C.o
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[ 64%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.C.o
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[ 64%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.C.o
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[ 64%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.C.o
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[ 64%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.C.o
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[ 64%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.C.o
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[ 64%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.C.o
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[ 64%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.C.o
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[ 64%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.C.o
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[ 64%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.C.o -c /«PKGBUILDDIR»/source/FILTERING/TRANSFORMERS/ComplementFilter.C
[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.C.o
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[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.C.o -c /«PKGBUILDDIR»/source/FILTERING/TRANSFORMERS/SqrtMower.C
[ 68%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.C.o
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[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.C.o
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[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.C.o -c /«PKGBUILDDIR»/source/FILTERING/TRANSFORMERS/WindowMower.C
[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.C.o
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[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.C.o -c /«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/DataFilters.C
[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.C.o -c /«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.C
[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.C.o -c /«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.C
/«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.C: In member function 'OpenMS::DoubleReal OpenMS::FeatureFindingMetabo::scoreRT_(const OpenMS::MassTrace&, const OpenMS::MassTrace&)':
/«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.C:652:16: warning: variable 'rt_range' set but not used [-Wunused-but-set-variable]
     DoubleReal rt_range(0.0), overlap(0.0);
                ^
[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.C.o -c /«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.C
[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.C.o -c /«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/MassTraceDetection.C
/«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/MassTraceDetection.C:187:122: warning: unused parameter 'lower_sd_bound' [-Wunused-parameter]
 void computeWeightedSDEstimate(std::list<PeakType> tmp, const DoubleReal & mean_t, DoubleReal & sd_t, const DoubleReal & lower_sd_bound)
                                                                                                                          ^
/«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/MassTraceDetection.C: In member function 'void OpenMS::MassTraceDetection::run(const OpenMS::MSExperiment<OpenMS::Peak1D>&, std::vector<OpenMS::MassTrace>&)':
/«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/MassTraceDetection.C:376:32: warning: unused variable 'left_mz' [-Wunused-variable]
                     DoubleReal left_mz(work_exp[trace_down_idx - 1][left_next_idx].getMZ());
                                ^
/«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/MassTraceDetection.C:377:32: warning: unused variable 'right_mz' [-Wunused-variable]
                     DoubleReal right_mz(work_exp[trace_down_idx - 1][right_next_idx].getMZ());
                                ^
/«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/MassTraceDetection.C:346:20: warning: unused variable 'ftl_mean' [-Wunused-variable]
         DoubleReal ftl_mean(centroid_mz), ftl_sd((centroid_mz / 1000000) * mass_error_ppm_);
                    ^
/«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/MassTraceDetection.C:289:10: warning: unused variable 'min_flank_scans' [-Wunused-variable]
     Size min_flank_scans(3);
          ^
[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SILACFilter.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SILACFilter.C.o -c /«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/SILACFilter.C
[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SILACFiltering.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SILACFiltering.C.o -c /«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/SILACFiltering.C
[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SILACAnalyzer.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SILACAnalyzer.C.o -c /«PKGBUILDDIR»/source/FILTERING/DATAREDUCTION/SILACAnalyzer.C
[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.C.o -c /«PKGBUILDDIR»/source/FILTERING/CALIBRATION/InternalCalibration.C
[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.C.o -c /«PKGBUILDDIR»/source/FILTERING/CALIBRATION/TOFCalibration.C
[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.C.o -c /«PKGBUILDDIR»/source/FILTERING/SMOOTHING/GaussFilter.C
[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.C.o -c /«PKGBUILDDIR»/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.C
[ 72%] Building CXX object CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.C.o
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[ 80%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LmaGaussModel.C.o
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[ 80%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LmaIsotopeFitter1D.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LmaIsotopeFitter1D.C.o -c /«PKGBUILDDIR»/source/TRANSFORMATIONS/FEATUREFINDER/LmaIsotopeFitter1D.C
/«PKGBUILDDIR»/source/TRANSFORMATIONS/FEATUREFINDER/LmaIsotopeFitter1D.C: In member function 'void OpenMS::LmaIsotopeFitter1D::setInitialParameters_()':
/«PKGBUILDDIR»/source/TRANSFORMATIONS/FEATUREFINDER/LmaIsotopeFitter1D.C:192:37: warning: typedef 'ContainerType' locally defined but not used [-Wunused-local-typedefs]
     typedef std::vector<DoubleReal> ContainerType;
                                     ^
[ 80%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LmaIsotopeModel.C.o
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[ 80%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.C.o
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[ 80%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.C.o
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[ 80%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.C.o
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[ 80%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.C.o
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[ 80%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SimpleExtender.C.o
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[ 80%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SimpleSeeder.C.o
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[ 80%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.C.o
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[ 80%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.C.o
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[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.C.o
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[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.C.o
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[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.C.o
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[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.C.o
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[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.C.o
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[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.C.o
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[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.C.o
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[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.C.o
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[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.C.o
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[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.C.o -c /«PKGBUILDDIR»/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.C
[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.C.o -c /«PKGBUILDDIR»/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.C
[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.C.o -c /«PKGBUILDDIR»/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.C
[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.C.o -c /«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.C
[ 84%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.C.o -c /«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.C
[ 88%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.C.o -c /«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.C
/«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.C: In member function 'bool OpenMS::OptimizePeakDeconvolution::optimize(std::vector<OpenMS::PeakShape>&, OpenMS::OptimizePeakDeconvolution::Data&)':
/«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.C:402:10: warning: variable 'num_peaks' set but not used [-Wunused-but-set-variable]
     Size num_peaks;
          ^
[ 88%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.C.o -c /«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.C
[ 88%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.C.o -c /«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.C
[ 88%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.C.o -c /«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.C
[ 88%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.C.o -c /«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.C
[ 88%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.C.o -c /«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.C
[ 88%] Building CXX object CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.C.o -c /«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.C
/«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.C: In static member function 'static OpenMS::Int OpenMS::TwoDOptimization::jacobian2D_(const gsl_vector*, void*, gsl_matrix*)':
/«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.C:257:16: warning: variable 'computed_signal' set but not used [-Wunused-but-set-variable]
     DoubleReal computed_signal, current_position, experimental_signal, last_position, step;
                ^
/«PKGBUILDDIR»/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.C:257:51: warning: variable 'experimental_signal' set but not used [-Wunused-but-set-variable]
     DoubleReal computed_signal, current_position, experimental_signal, last_position, step;
                                                   ^
[ 88%] Building CXX object CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.C.o
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[ 92%] Building CXX object CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.C.o -c /«PKGBUILDDIR»/source/SIMULATION/EGHModel.C
[ 92%] Building CXX object CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.C.o -c /«PKGBUILDDIR»/source/SIMULATION/EGHFitter1D.C
[ 92%] Building CXX object CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.C.o -c /«PKGBUILDDIR»/source/SIMULATION/IonizationSimulation.C
[ 92%] Building CXX object CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.C.o -c /«PKGBUILDDIR»/source/SIMULATION/MSSim.C
[ 92%] Building CXX object CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.C.o -c /«PKGBUILDDIR»/source/SIMULATION/RTSimulation.C
[ 92%] Building CXX object CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.C.o -c /«PKGBUILDDIR»/source/SIMULATION/RawMSSignalSimulation.C
/«PKGBUILDDIR»/source/SIMULATION/RawMSSignalSimulation.C: In member function 'void OpenMS::RawMSSignalSimulation::samplePeptideModel2D_(const OpenMS::ProductModel<2u>&, OpenMS::SimCoordinateType, OpenMS::SimCoordinateType, OpenMS::SimCoordinateType, OpenMS::SimCoordinateType, OpenMS::MSSimExperiment&, OpenMS::MSSimExperiment&, OpenMS::Feature&)':
/«PKGBUILDDIR»/source/SIMULATION/RawMSSignalSimulation.C:691:9: warning: variable 'end_scan' set but not used [-Wunused-but-set-variable]
     Int end_scan  = std::numeric_limits<Int>::min();
         ^
[ 92%] Building CXX object CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.C.o -c /«PKGBUILDDIR»/source/SIMULATION/RawTandemMSSignalSimulation.C
[ 92%] Building CXX object CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.C.o -c /«PKGBUILDDIR»/source/SIMULATION/LABELING/BaseLabeler.C
[ 92%] Building CXX object CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.C.o -c /«PKGBUILDDIR»/source/SIMULATION/LABELING/ITRAQLabeler.C
[ 92%] Building CXX object CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.C.o -c /«PKGBUILDDIR»/source/SIMULATION/LABELING/LabelFreeLabeler.C
[ 92%] Building CXX object CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.C.o -c /«PKGBUILDDIR»/source/SIMULATION/LABELING/O18Labeler.C
[ 92%] Building CXX object CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVReader.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/OPENSWATH/DIAHelper.C
/«PKGBUILDDIR»/source/ANALYSIS/OPENSWATH/DIAHelper.C: In function 'void OpenMS::DIAHelpers::getAveragineIsotopeDistribution(double, std::vector<std::pair<double, double> >&, double, int, double)':
/«PKGBUILDDIR»/source/ANALYSIS/OPENSWATH/DIAHelper.C:104:81: warning: typedef 'IsotopePattern' locally defined but not used [-Wunused-local-typedefs]
       typedef OpenMS::FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern IsotopePattern;
                                                                                 ^
[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.C.o
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/«PKGBUILDDIR»/source/ANALYSIS/OPENSWATH/DIAScoring.C: In member function 'OpenMS::DoubleReal OpenMS::DIAScoring::scoreIsotopePattern_(double, const std::vector<double>&, int)':
/«PKGBUILDDIR»/source/ANALYSIS/OPENSWATH/DIAScoring.C:285:79: warning: typedef 'IsotopePattern' locally defined but not used [-Wunused-local-typedefs]
     typedef OpenMS::FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern IsotopePattern;
                                                                               ^
[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.C.o -c /«PKGBUILDDIR»/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.C
[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.C.o
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[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.C.o -c /«PKGBUILDDIR»/source/APPLICATIONS/TOPPBase.C
/«PKGBUILDDIR»/source/APPLICATIONS/TOPPBase.C: In member function 'OpenMS::ParameterInformation OpenMS::TOPPBase::paramEntryToParameterInformation_(const OpenMS::Param::ParamEntry&, const OpenMS::String&, const OpenMS::String&) const':
/«PKGBUILDDIR»/source/APPLICATIONS/TOPPBase.C:817:104: warning: 'type' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ParameterInformation param(name, type, argument, entry.value, entry.description, required, advanced);
                                                                                                        ^
[ 96%] Building CXX object CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.C.o
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[100%] Building CXX object CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.C.o -c /«PKGBUILDDIR»/source/APPLICATIONS/ConsoleUtils.C
/«PKGBUILDDIR»/source/APPLICATIONS/ConsoleUtils.C: In member function 'int OpenMS::ConsoleUtils::readConsoleSize_()':
/«PKGBUILDDIR»/source/APPLICATIONS/ConsoleUtils.C:104:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
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                                        ^
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/usr/bin/cmake -E echo "You should now build the TOPP tools and tests."
You should now build the TOPP tools and tests.
/usr/bin/cmake -E echo "Then you should test your installation by executing the tests."
Then you should test your installation by executing the tests.
/usr/bin/cmake -E echo ""

/usr/bin/cmake -E echo "Make sure to add the OpenMS and contrib lib/ path"
Make sure to add the OpenMS and contrib lib/ path
/usr/bin/cmake -E echo "to your LD_LIBRARY_PATH environment variable."
to your LD_LIBRARY_PATH environment variable.
/usr/bin/cmake -E echo "Otherwise the tests and TOPP tools will not work."
Otherwise the tests and TOPP tools will not work.
/usr/bin/cmake -E echo ""

/usr/bin/cmake -E echo "For a full list of targets execute:"
For a full list of targets execute:
/usr/bin/cmake -E echo "make targets"
make targets
/usr/bin/cmake -E echo ""

/usr/bin/cmake -E echo ==========================================================================
==========================================================================
/usr/bin/cmake -E echo ""

make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
[100%] Built target OpenMS
make[3]: Leaving directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/cmake -E cmake_progress_start /«PKGBUILDDIR»/debian/build/CMakeFiles 0
make[2]: Leaving directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/make -f CMakeFiles/Makefile2 TOPP
make[2]: Entering directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/cmake -H/«PKGBUILDDIR» -B/«PKGBUILDDIR»/debian/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /«PKGBUILDDIR»/debian/build/CMakeFiles 48
/usr/bin/make -f CMakeFiles/Makefile2 CMakeFiles/TOPP.dir/all
make[3]: Entering directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/make -f source/TEST/CMakeFiles/svn_revision_update_forTests.dir/build.make source/TEST/CMakeFiles/svn_revision_update_forTests.dir/depend
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
cd /«PKGBUILDDIR»/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«PKGBUILDDIR» /«PKGBUILDDIR»/source/TEST /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build/source/TEST /«PKGBUILDDIR»/debian/build/source/TEST/CMakeFiles/svn_revision_update_forTests.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/make -f source/TEST/CMakeFiles/svn_revision_update_forTests.dir/build.make source/TEST/CMakeFiles/svn_revision_update_forTests.dir/build
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
cd /«PKGBUILDDIR»/debian/build/source/TEST && /usr/bin/cmake -DSOURCE_DIR=/«PKGBUILDDIR»/source/TEST -DSVN_REVISION_FILE=/«PKGBUILDDIR»/debian/build/include/OpenMS/openms_svn_revision.h -DOPENMS_HAS_SVNVERSION=OFF -DSVNVERSION_EXECUTABLE=SVNVERSION_EXECUTABLE-NOTFOUND -P /«PKGBUILDDIR»/source/TEST/../../cmake/svnversion.cmake
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
[  0%] Built target svn_revision_update_forTests
/usr/bin/make -f CMakeFiles/svn_revision_update.dir/build.make CMakeFiles/svn_revision_update.dir/depend
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
cd /«PKGBUILDDIR»/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«PKGBUILDDIR» /«PKGBUILDDIR» /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build/CMakeFiles/svn_revision_update.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/make -f CMakeFiles/svn_revision_update.dir/build.make CMakeFiles/svn_revision_update.dir/build
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/cmake -DSOURCE_DIR=/«PKGBUILDDIR» -DSVN_REVISION_FILE=/«PKGBUILDDIR»/debian/build/include/OpenMS/openms_svn_revision.h -DOPENMS_HAS_SVNVERSION=OFF -DSVNVERSION_EXECUTABLE=SVNVERSION_EXECUTABLE-NOTFOUND -DENABLE_SVN=ON -P /«PKGBUILDDIR»/cmake/svnversion.cmake
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
[  0%] Built target svn_revision_update
/usr/bin/make -f CMakeFiles/OpenSwathAlgo.dir/build.make CMakeFiles/OpenSwathAlgo.dir/depend
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
cd /«PKGBUILDDIR»/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«PKGBUILDDIR» /«PKGBUILDDIR» /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/make -f CMakeFiles/OpenSwathAlgo.dir/build.make CMakeFiles/OpenSwathAlgo.dir/build
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
make[4]: Nothing to be done for 'CMakeFiles/OpenSwathAlgo.dir/build'.
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
[  2%] Built target OpenSwathAlgo
/usr/bin/make -f CMakeFiles/OpenMS.dir/build.make CMakeFiles/OpenMS.dir/depend
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
cd /«PKGBUILDDIR»/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«PKGBUILDDIR» /«PKGBUILDDIR» /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build/CMakeFiles/OpenMS.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/make -f CMakeFiles/OpenMS.dir/build.make CMakeFiles/OpenMS.dir/build
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
make[4]: Nothing to be done for 'CMakeFiles/OpenMS.dir/build'.
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
[ 52%] Built target OpenMS
/usr/bin/make -f CMakeFiles/XTandemAdapter.dir/build.make CMakeFiles/XTandemAdapter.dir/depend
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
cd /«PKGBUILDDIR»/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«PKGBUILDDIR» /«PKGBUILDDIR» /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build /«PKGBUILDDIR»/debian/build/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake --color=
Dependee "/«PKGBUILDDIR»/debian/build/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake" is newer than depender "/«PKGBUILDDIR»/debian/build/CMakeFiles/XTandemAdapter.dir/depend.internal".
Dependee "/«PKGBUILDDIR»/debian/build/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/«PKGBUILDDIR»/debian/build/CMakeFiles/XTandemAdapter.dir/depend.internal".
Scanning dependencies of target XTandemAdapter
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
/usr/bin/make -f CMakeFiles/XTandemAdapter.dir/build.make CMakeFiles/XTandemAdapter.dir/build
make[4]: Entering directory '/«PKGBUILDDIR»/debian/build'
[ 52%] Building CXX object CMakeFiles/XTandemAdapter.dir/source/APPLICATIONS/TOPP/XTandemAdapter.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -I/usr/include/gsl -I/usr/include/libsvm -I/«PKGBUILDDIR»/include -I/«PKGBUILDDIR»/debian/build/include -I/«PKGBUILDDIR»/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/XTandemAdapter.dir/source/APPLICATIONS/TOPP/XTandemAdapter.C.o -c /«PKGBUILDDIR»/source/APPLICATIONS/TOPP/XTandemAdapter.C
[ 52%] Linking CXX executable bin/XTandemAdapter
/usr/bin/cmake -E cmake_link_script CMakeFiles/XTandemAdapter.dir/link.txt --verbose=1
/usr/bin/c++   -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG   -Wl,-z,relro -fopenmp CMakeFiles/XTandemAdapter.dir/source/APPLICATIONS/TOPP/XTandemAdapter.C.o  -o bin/XTandemAdapter -rdynamic lib/libOpenMS.so.1.11.1 -lQtOpenGL -lQtSvg -lQtWebKit -lQtTest -lQtXml -lQtSql -lQtNetwork lib/libOpenSwathAlgo.so.1.11.1 -lgsl -lgslcblas -lsvm -lm -lxerces-c -lboost_iostreams -lboost_date_time -lboost_math_c99 -lboost_regex -lbz2 -lz -lglpk 
/usr/bin/ld: CMakeFiles/XTandemAdapter.dir/source/APPLICATIONS/TOPP/XTandemAdapter.C.o: undefined reference to symbol '_ZNK4QDir6mkpathERK7QString'
//usr/lib/arm-linux-gnueabihf/libQtCore.so.4: error adding symbols: DSO missing from command line
collect2: error: ld returned 1 exit status
make[4]: *** [bin/XTandemAdapter] Error 1
make[3]: *** [CMakeFiles/XTandemAdapter.dir/all] Error 2
CMakeFiles/XTandemAdapter.dir/build.make:114: recipe for target 'bin/XTandemAdapter' failed
make[4]: Leaving directory '/«PKGBUILDDIR»/debian/build'
CMakeFiles/Makefile2:6864: recipe for target 'CMakeFiles/XTandemAdapter.dir/all' failed
make[3]: Leaving directory '/«PKGBUILDDIR»/debian/build'
make[2]: *** [CMakeFiles/TOPP.dir/rule] Error 2
CMakeFiles/Makefile2:6537: recipe for target 'CMakeFiles/TOPP.dir/rule' failed
make[2]: Leaving directory '/«PKGBUILDDIR»/debian/build'
make[1]: *** [TOPP] Error 2
Makefile:2409: recipe for target 'TOPP' failed
make[1]: Leaving directory '/«PKGBUILDDIR»/debian/build'
make: *** [build-arch-stamp] Error 2
dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2
debian/rules:76: recipe for target 'build-arch-stamp' failed
────────────────────────────────────────────────────────────────────────────────
Build finished at 20151017-1337

Finished
────────

E: Build failure (dpkg-buildpackage died)

┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use

┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

Build Architecture: armhf
Build-Space: 1106436
Build-Time: 12731
Distribution: stretch-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 1600
Job: openms_1.11.1-5
Machine Architecture: armhf
Package: openms
Package-Time: 14563
Source-Version: 1.11.1-5
Space: 1106436
Status: attempted
Version: 1.11.1-5+b1
────────────────────────────────────────────────────────────────────────────────
Finished at 20151017-1337
Build needed 04:02:43, 1106436k disc space
Raspbian Package Auto-Building

Build log for openms (1.11.1-5+b1) on armhf
