ngs-sdk →
2.10.9-1 →
armhf → 2021-01-23 06:24:00
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd
+==============================================================================+
| ngs-sdk 2.10.9-1 (armhf) Sat, 23 Jan 2021 06:03:41 +0000 |
+==============================================================================+
Package: ngs-sdk
Version: 2.10.9-1
Source Version: 2.10.9-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-a34803bc-84bf-4ba7-a633-a1a5faa211b8' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [12.1 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [13.1 MB]
Fetched 25.2 MB in 28s (913 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'ngs-sdk' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/ngs-sdk.git
Please use:
git clone https://salsa.debian.org/med-team/ngs-sdk.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1114 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main ngs-sdk 2.10.9-1 (dsc) [2299 B]
Get:2 http://172.17.0.1/private bullseye-staging/main ngs-sdk 2.10.9-1 (tar) [1100 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main ngs-sdk 2.10.9-1 (diff) [11.8 kB]
Fetched 1114 kB in 1s (1656 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/ngs-sdk-dJdg6j/ngs-sdk-2.10.9' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/ngs-sdk-dJdg6j' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-WVkjow/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-WVkjow/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-WVkjow/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-WVkjow/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-WVkjow/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-WVkjow/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-WVkjow/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-WVkjow/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2902 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils krb5-locales libnss-nis libnss-nisplus netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 78 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-WVkjow/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (23.6 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12505 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), d-shlibs, markdown, python3-all, python3-distutils, dh-python, javahelper, maven-repo-helper, default-jdk
Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, markdown, python3-all, python3-distutils, dh-python, javahelper, maven-repo-helper, default-jdk
dpkg-deb: building package 'sbuild-build-depends-ngs-sdk-dummy' in '/<<BUILDDIR>>/resolver-WVkjow/apt_archive/sbuild-build-depends-ngs-sdk-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-ngs-sdk-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-WVkjow/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-WVkjow/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-WVkjow/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-WVkjow/apt_archive ./ Sources [563 B]
Get:5 copy:/<<BUILDDIR>>/resolver-WVkjow/apt_archive ./ Packages [636 B]
Fetched 2532 B in 1s (3177 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install ngs-sdk build dependencies (apt-based resolver)
-------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libnss-nis libnss-nisplus
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev ca-certificates
ca-certificates-java d-shlibs dctrl-tools debhelper default-jdk
default-jdk-headless default-jre default-jre-headless devscripts
dh-autoreconf dh-python dh-strip-nondeterminism dwz file fontconfig-config
fonts-dejavu-core gettext gettext-base groff-base intltool-debian
java-common javahelper libarchive-zip-perl libasound2 libasound2-data
libavahi-client3 libavahi-common-data libavahi-common3
libb-hooks-op-check-perl libbrotli1 libbsd0 libclass-method-modifiers-perl
libcups2 libdbus-1-3 libdebhelper-perl libdevel-callchecker-perl
libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2
libdynaloader-functions-perl libedit2 libelf1 libencode-locale-perl
libexpat1 libfile-dirlist-perl libfile-homedir-perl libfile-listing-perl
libfile-stripnondeterminism-perl libfile-touch-perl libfile-which-perl
libfontconfig1 libfreetype6 libgif7 libgl1 libgl1-mesa-dri libglapi-mesa
libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgnutls30 libgraphite2-3
libharfbuzz0b libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl
libhttp-cookies-perl libhttp-date-perl libhttp-message-perl
libhttp-negotiate-perl libicu67 libimport-into-perl libio-html-perl
libio-pty-perl libio-socket-ssl-perl libipc-run-perl libjpeg62-turbo
liblcms2-2 libllvm11 liblwp-mediatypes-perl liblwp-protocol-https-perl
libmagic-mgc libmagic1 libmodule-runtime-perl libmoo-perl libnet-http-perl
libnet-ssleay-perl libnspr4 libnss3 libparams-classify-perl libpcsclite1
libpipeline1 libpng16-16 libpython3-stdlib libpython3.9-minimal
libpython3.9-stdlib librole-tiny-perl libsensors-config libsensors5
libsigsegv2 libstrictures-perl libsub-override-perl libsub-quote-perl
libtimedate-perl libtinfo5 libtool libtry-tiny-perl libuchardet0 liburi-perl
libvulkan1 libwww-perl libwww-robotrules-perl libx11-6 libx11-data
libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0
libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6
libxext6 libxfixes3 libxi6 libxml2 libxrender1 libxshmfence1 libxtst6
libxxf86vm1 libz3-4 m4 mailcap man-db markdown maven-repo-helper media-types
mime-support openjdk-11-jdk openjdk-11-jdk-headless openjdk-11-jre
openjdk-11-jre-headless openssl patchutils perl-openssl-defaults po-debconf
python3 python3-all python3-distutils python3-lib2to3 python3-minimal
python3.9 python3.9-minimal ucf wdiff x11-common
Suggested packages:
autoconf-archive gnu-standards autoconf-doc debtags dh-make adequate at
autopkgtest bls-standalone bsd-mailx | mailx check-all-the-things
cvs-buildpackage devscripts-el diffoscope disorderfs dose-extra duck
faketime gnuplot how-can-i-help libauthen-sasl-perl libdbd-pg-perl
libfile-desktopentry-perl libnet-smtps-perl libterm-size-perl
libyaml-syck-perl mmdebstrap mozilla-devscripts mutt piuparts
postgresql-client quilt ratt reprotest ssh-client svn-buildpackage w3m
gettext-doc libasprintf-dev libgettextpo-dev groff libasound2-plugins
alsa-utils cups-common gnutls-bin libdata-dump-perl liblcms2-utils
libcrypt-ssleay-perl libscalar-number-perl pcscd lm-sensors
libbareword-filehandles-perl libindirect-perl libmultidimensional-perl
libtool-doc gfortran | fortran95-compiler gcj-jdk libauthen-ntlm-perl m4-doc
apparmor less www-browser maven-debian-helper openjdk-11-demo
openjdk-11-source visualvm libnss-mdns fonts-dejavu-extra
fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei
| fonts-wqy-zenhei fonts-indic libmail-box-perl python3-doc python3-tk
python3-venv python3.9-venv python3.9-doc binfmt-support wdiff-doc
Recommended packages:
dput | dupload libdistro-info-perl libgit-wrapper-perl libgitlab-api-v4-perl
liblist-compare-perl libstring-shellquote-perl licensecheck lintian
pristine-tar python3-apt python3-debian python3-magic python3-requests
python3-unidiff python3-xdg strace unzip wget | curl debian-keyring equivs
libsoap-lite-perl curl | wget | lynx alsa-ucm-conf alsa-topology-conf dbus
libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs
libhtml-format-perl libclone-perl libclass-xsaccessor-perl
libnamespace-clean-perl libsub-name-perl libltdl-dev mesa-vulkan-drivers
| vulkan-icd libdata-dump-perl libhtml-form-perl libhttp-daemon-perl
libmailtools-perl libxt-dev libatk-wrapper-java-jni fonts-dejavu-extra
libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev ca-certificates
ca-certificates-java d-shlibs dctrl-tools debhelper default-jdk
default-jdk-headless default-jre default-jre-headless devscripts
dh-autoreconf dh-python dh-strip-nondeterminism dwz file fontconfig-config
fonts-dejavu-core gettext gettext-base groff-base intltool-debian
java-common javahelper libarchive-zip-perl libasound2 libasound2-data
libavahi-client3 libavahi-common-data libavahi-common3
libb-hooks-op-check-perl libbrotli1 libbsd0 libclass-method-modifiers-perl
libcups2 libdbus-1-3 libdebhelper-perl libdevel-callchecker-perl
libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2
libdynaloader-functions-perl libedit2 libelf1 libencode-locale-perl
libexpat1 libfile-dirlist-perl libfile-homedir-perl libfile-listing-perl
libfile-stripnondeterminism-perl libfile-touch-perl libfile-which-perl
libfontconfig1 libfreetype6 libgif7 libgl1 libgl1-mesa-dri libglapi-mesa
libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libharfbuzz0b
libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl
libhttp-cookies-perl libhttp-date-perl libhttp-message-perl
libhttp-negotiate-perl libicu67 libimport-into-perl libio-html-perl
libio-pty-perl libio-socket-ssl-perl libipc-run-perl libjpeg62-turbo
liblcms2-2 libllvm11 liblwp-mediatypes-perl liblwp-protocol-https-perl
libmagic-mgc libmagic1 libmodule-runtime-perl libmoo-perl libnet-http-perl
libnet-ssleay-perl libnspr4 libnss3 libparams-classify-perl libpcsclite1
libpipeline1 libpng16-16 libpython3-stdlib libpython3.9-minimal
libpython3.9-stdlib librole-tiny-perl libsensors-config libsensors5
libsigsegv2 libstrictures-perl libsub-override-perl libsub-quote-perl
libtimedate-perl libtinfo5 libtool libtry-tiny-perl libuchardet0 liburi-perl
libvulkan1 libwww-perl libwww-robotrules-perl libx11-6 libx11-data
libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0
libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6
libxext6 libxfixes3 libxi6 libxml2 libxrender1 libxshmfence1 libxtst6
libxxf86vm1 libz3-4 m4 mailcap man-db markdown maven-repo-helper media-types
mime-support openjdk-11-jdk openjdk-11-jdk-headless openjdk-11-jre
openjdk-11-jre-headless openssl patchutils perl-openssl-defaults po-debconf
python3 python3-all python3-distutils python3-lib2to3 python3-minimal
python3.9 python3.9-minimal sbuild-build-depends-ngs-sdk-dummy ucf wdiff
x11-common
The following packages will be upgraded:
libgnutls30
1 upgraded, 167 newly installed, 0 to remove and 77 not upgraded.
Need to get 281 MB of archives.
After this operation, 578 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-WVkjow/apt_archive ./ sbuild-build-depends-ngs-sdk-dummy 0.invalid.0 [920 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-minimal armhf 3.9.1-2+rpi1 [790 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.10-1 [73.3 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf python3.9-minimal armhf 3.9.1-2+rpi1 [1623 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.9.1-1 [37.8 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf media-types all 4.0.0 [30.3 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf mailcap all 3.68 [31.6 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.66 [10.9 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-stdlib armhf 3.9.1-2+rpi1 [1658 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf python3.9 armhf 3.9.1-2+rpi1 [464 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.9.1-1 [21.0 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.9.1-1 [64.1 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libgnutls30 armhf 3.7.0-5 [1275 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.21-3 [170 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-3 [32.4 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-14 [313 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.3-2 [814 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.21-3 [509 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1i-2 [813 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20200601 [158 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf java-common all 0.72 [14.5 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common-data armhf 0.8-3+b2 [127 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common3 armhf 0.8-3+b2 [55.3 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libdbus-1-3 armhf 1.12.20-1+b3 [192 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libavahi-client3 armhf 0.8-3+b2 [58.0 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libcups2 armhf 2.3.3op1-7 [311 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf liblcms2-2 armhf 2.12~rc1-2 [121 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:2.0.5-2 [120 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.9-2+b1 [261 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-3 [276 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.4+dfsg-1 [353 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-4.2 [281 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-4.2 [328 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libnspr4 armhf 2:4.29-1 [89.9 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libnss3 armhf 2:3.60-1 [1086 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libasound2-data all 1.2.4-1.1 [38.2 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libasound2 armhf 1.2.4-1.1 [303 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.4-1 [1182 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.7-1 [1366 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libpcsclite1 armhf 1.9.0-1 [56.7 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2.1 [136 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.7.0-2 [310 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.7.0-2 [706 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1.1 [47.8 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libxi6 armhf 2:1.7.10-1 [77.9 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+21 [252 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libxtst6 armhf 2:1.2.3-1 [26.3 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf openjdk-11-jre-headless armhf 11.0.10+8-1 [32.8 MB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf default-jre-headless armhf 2:1.11-72+b4 [11.2 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates-java all 20190909 [15.7 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf d-shlibs all 0.98 [17.9 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-15 [513 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.3.1 [188 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.10.0-1 [25.6 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.10.0-1 [15.3 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.182-3 [162 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13+20201015-2 [162 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-6 [8289 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.3 [580 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.21-3 [1214 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.3.1 [1010 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libglvnd0 armhf 1.3.2-1 [55.2 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libdrm-common all 2.4.103-2+rpi1 [14.9 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libdrm2 armhf 2.4.103-2+rpi1 [37.7 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libglapi-mesa armhf 20.3.2-1+rpi1 [80.3 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libx11-xcb1 armhf 2:1.7.0-2 [203 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri2-0 armhf 1.14-2.1 [103 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri3-0 armhf 1.14-2.1 [102 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libxcb-glx0 armhf 1.14-2.1 [117 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libxcb-present0 armhf 1.14-2.1 [101 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.14-2.1 [101 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libxcb-sync1 armhf 1.14-2.1 [104 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libxcb-xfixes0 armhf 1.14-2.1 [105 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libxdamage1 armhf 1:1.1.5-2 [15.2 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libxfixes3 armhf 1:5.0.3-2 [20.7 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.1 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libdrm-amdgpu1 armhf 2.4.103-2+rpi1 [27.3 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libdrm-nouveau2 armhf 2.4.103-2+rpi1 [24.9 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libdrm-radeon1 armhf 2.4.103-2+rpi1 [29.1 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libedit2 armhf 3.1-20191231-2 [80.2 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libz3-4 armhf 4.8.9-1 [5548 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libllvm11 armhf 1:11.0.0-5+rpi1 [15.6 MB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libsensors-config all 1:3.6.0-5 [32.2 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libsensors5 armhf 1:3.6.0-5 [49.5 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libvulkan1 armhf 1.2.162.0-1 [82.5 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libgl1-mesa-dri armhf 20.3.2-1+rpi1 [5882 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libglx-mesa0 armhf 20.3.2-1+rpi1 [171 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libglx0 armhf 1.3.2-1 [25.8 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libgl1 armhf 1.3.2-1 [106 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libgif7 armhf 5.1.9-1 [42.5 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf openjdk-11-jre armhf 11.0.10+8-1 [30.7 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf default-jre armhf 2:1.11-72+b4 [1044 B]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf openjdk-11-jdk-headless armhf 11.0.10+8-1 [174 MB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf default-jdk-headless armhf 2:1.11-72+b4 [1100 B]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf openjdk-11-jdk armhf 11.0.10+8-1 [6940 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf default-jdk armhf 2:1.11-72+b4 [1056 B]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libfile-dirlist-perl all 0.05-2 [7444 B]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libfile-homedir-perl all 1.006-1 [43.8 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libfile-touch-perl all 0.11-1 [9254 B]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libio-pty-perl armhf 1:1.15-2 [36.1 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libipc-run-perl all 20200505.0-1 [102 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf libclass-method-modifiers-perl all 2.13-1 [19.2 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libb-hooks-op-check-perl armhf 0.22-1+b4 [11.0 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libdynaloader-functions-perl all 0.003-1.1 [12.7 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libdevel-callchecker-perl armhf 0.008-1+b2 [15.7 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libparams-classify-perl armhf 0.015-1+b3 [24.6 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libmodule-runtime-perl all 0.016-1 [19.4 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libimport-into-perl all 1.002005-1 [11.6 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf librole-tiny-perl all 2.001004-1 [20.8 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libstrictures-perl all 2.000006-1 [18.6 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf libsub-quote-perl all 2.006006-1 [21.0 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libmoo-perl all 2.004004-1 [59.9 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libencode-locale-perl all 1.05-1.1 [13.2 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf libtimedate-perl all 2.3300-1 [39.2 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf libhttp-date-perl all 6.05-1 [10.4 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libfile-listing-perl all 6.14-1 [12.4 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libhtml-tagset-perl all 3.20-4 [13.0 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf liburi-perl all 5.06-1 [90.3 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf libhtml-parser-perl armhf 3.75-1+b1 [102 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf libhtml-tree-perl all 5.07-2 [213 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf libio-html-perl all 1.001-1.1 [18.6 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf liblwp-mediatypes-perl all 6.04-1 [19.9 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf libhttp-message-perl all 6.27-1 [79.5 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf libhttp-cookies-perl all 6.10-1 [19.6 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf libhttp-negotiate-perl all 6.01-1 [12.8 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf perl-openssl-defaults armhf 5 [7360 B]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf libnet-ssleay-perl armhf 1.88-3+b1 [300 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf libio-socket-ssl-perl all 2.068-1 [215 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf libnet-http-perl all 6.20-1 [25.1 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf liblwp-protocol-https-perl all 6.10-1 [12.2 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf libtry-tiny-perl all 0.30-1 [23.3 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf libwww-perl all 6.52-1 [192 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf patchutils armhf 0.4.2-1 [68.7 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.2+20201114-2 [324 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf wdiff armhf 1.2.2-2 [120 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf devscripts armhf 2.20.5 [1084 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.9.1-2 [77.2 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.9.1-2 [143 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 4.20201102 [99.3 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf javahelper all 0.77 [97.0 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf markdown all 1.0.1-10.1 [17.5 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf maven-repo-helper all 1.9.4 [142 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf python3-all armhf 3.9.1-1 [1056 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 281 MB in 1min 57s (2403 kB/s)
Selecting previously unselected package libuchardet0:armhf.
(Reading database ... 12505 files and directories currently installed.)
Preparing to unpack .../0-libuchardet0_0.0.7-1_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../1-groff-base_1.22.4-5_armhf.deb ...
Unpacking groff-base (1.22.4-5) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../2-libpipeline1_1.5.3-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.3-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../3-man-db_2.9.3-2_armhf.deb ...
Unpacking man-db (2.9.3-2) ...
Selecting previously unselected package libpython3.9-minimal:armhf.
Preparing to unpack .../4-libpython3.9-minimal_3.9.1-2+rpi1_armhf.deb ...
Unpacking libpython3.9-minimal:armhf (3.9.1-2+rpi1) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../5-libexpat1_2.2.10-1_armhf.deb ...
Unpacking libexpat1:armhf (2.2.10-1) ...
Selecting previously unselected package python3.9-minimal.
Preparing to unpack .../6-python3.9-minimal_3.9.1-2+rpi1_armhf.deb ...
Unpacking python3.9-minimal (3.9.1-2+rpi1) ...
Setting up libpython3.9-minimal:armhf (3.9.1-2+rpi1) ...
Setting up libexpat1:armhf (2.2.10-1) ...
Setting up python3.9-minimal (3.9.1-2+rpi1) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 13325 files and directories currently installed.)
Preparing to unpack .../0-python3-minimal_3.9.1-1_armhf.deb ...
Unpacking python3-minimal (3.9.1-1) ...
Selecting previously unselected package media-types.
Preparing to unpack .../1-media-types_4.0.0_all.deb ...
Unpacking media-types (4.0.0) ...
Selecting previously unselected package mailcap.
Preparing to unpack .../2-mailcap_3.68_all.deb ...
Unpacking mailcap (3.68) ...
Selecting previously unselected package mime-support.
Preparing to unpack .../3-mime-support_3.66_all.deb ...
Unpacking mime-support (3.66) ...
Selecting previously unselected package libpython3.9-stdlib:armhf.
Preparing to unpack .../4-libpython3.9-stdlib_3.9.1-2+rpi1_armhf.deb ...
Unpacking libpython3.9-stdlib:armhf (3.9.1-2+rpi1) ...
Selecting previously unselected package python3.9.
Preparing to unpack .../5-python3.9_3.9.1-2+rpi1_armhf.deb ...
Unpacking python3.9 (3.9.1-2+rpi1) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../6-libpython3-stdlib_3.9.1-1_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.9.1-1) ...
Setting up python3-minimal (3.9.1-1) ...
Selecting previously unselected package python3.
(Reading database ... 13738 files and directories currently installed.)
Preparing to unpack .../python3_3.9.1-1_armhf.deb ...
Unpacking python3 (3.9.1-1) ...
Preparing to unpack .../libgnutls30_3.7.0-5_armhf.deb ...
Unpacking libgnutls30:armhf (3.7.0-5) over (3.6.15-4) ...
Setting up libgnutls30:armhf (3.7.0-5) ...
Selecting previously unselected package libmagic-mgc.
(Reading database ... 13772 files and directories currently installed.)
Preparing to unpack .../000-libmagic-mgc_1%3a5.39-3_armhf.deb ...
Unpacking libmagic-mgc (1:5.39-3) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../001-libmagic1_1%3a5.39-3_armhf.deb ...
Unpacking libmagic1:armhf (1:5.39-3) ...
Selecting previously unselected package file.
Preparing to unpack .../002-file_1%3a5.39-3_armhf.deb ...
Unpacking file (1:5.39-3) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../003-gettext-base_0.21-3_armhf.deb ...
Unpacking gettext-base (0.21-3) ...
Selecting previously unselected package ucf.
Preparing to unpack .../004-ucf_3.0043_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0043) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../005-libsigsegv2_2.12-3_armhf.deb ...
Unpacking libsigsegv2:armhf (2.12-3) ...
Selecting previously unselected package m4.
Preparing to unpack .../006-m4_1.4.18-5_armhf.deb ...
Unpacking m4 (1.4.18-5) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../007-autoconf_2.69-14_all.deb ...
Unpacking autoconf (2.69-14) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../008-autotools-dev_20180224.1+nmu1_all.deb ...
Unpacking autotools-dev (20180224.1+nmu1) ...
Selecting previously unselected package automake.
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Unpacking automake (1:1.16.3-2) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../010-autopoint_0.21-3_all.deb ...
Unpacking autopoint (0.21-3) ...
Selecting previously unselected package openssl.
Preparing to unpack .../011-openssl_1.1.1i-2_armhf.deb ...
Unpacking openssl (1.1.1i-2) ...
Selecting previously unselected package ca-certificates.
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Unpacking ca-certificates (20200601) ...
Selecting previously unselected package java-common.
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Unpacking java-common (0.72) ...
Selecting previously unselected package libavahi-common-data:armhf.
Preparing to unpack .../014-libavahi-common-data_0.8-3+b2_armhf.deb ...
Unpacking libavahi-common-data:armhf (0.8-3+b2) ...
Selecting previously unselected package libavahi-common3:armhf.
Preparing to unpack .../015-libavahi-common3_0.8-3+b2_armhf.deb ...
Unpacking libavahi-common3:armhf (0.8-3+b2) ...
Selecting previously unselected package libdbus-1-3:armhf.
Preparing to unpack .../016-libdbus-1-3_1.12.20-1+b3_armhf.deb ...
Unpacking libdbus-1-3:armhf (1.12.20-1+b3) ...
Selecting previously unselected package libavahi-client3:armhf.
Preparing to unpack .../017-libavahi-client3_0.8-3+b2_armhf.deb ...
Unpacking libavahi-client3:armhf (0.8-3+b2) ...
Selecting previously unselected package libcups2:armhf.
Preparing to unpack .../018-libcups2_2.3.3op1-7_armhf.deb ...
Unpacking libcups2:armhf (2.3.3op1-7) ...
Selecting previously unselected package liblcms2-2:armhf.
Preparing to unpack .../019-liblcms2-2_2.12~rc1-2_armhf.deb ...
Unpacking liblcms2-2:armhf (2.12~rc1-2) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../020-libjpeg62-turbo_1%3a2.0.5-2_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:2.0.5-2) ...
Selecting previously unselected package libbrotli1:armhf.
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Unpacking libbrotli1:armhf (1.0.9-2+b1) ...
Selecting previously unselected package libpng16-16:armhf.
Preparing to unpack .../022-libpng16-16_1.6.37-3_armhf.deb ...
Unpacking libpng16-16:armhf (1.6.37-3) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../023-libfreetype6_2.10.4+dfsg-1_armhf.deb ...
Unpacking libfreetype6:armhf (2.10.4+dfsg-1) ...
Selecting previously unselected package fonts-dejavu-core.
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Unpacking fonts-dejavu-core (2.37-2) ...
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Unpacking fontconfig-config (2.13.1-4.2) ...
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Unpacking libfontconfig1:armhf (2.13.1-4.2) ...
Selecting previously unselected package libnspr4:armhf.
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Unpacking libnspr4:armhf (2:4.29-1) ...
Selecting previously unselected package libnss3:armhf.
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Unpacking libnss3:armhf (2:3.60-1) ...
Selecting previously unselected package libasound2-data.
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Unpacking libasound2-data (1.2.4-1.1) ...
Selecting previously unselected package libasound2:armhf.
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Unpacking libasound2:armhf (1.2.4-1.1) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../031-libglib2.0-0_2.66.4-1_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.66.4-1) ...
Selecting previously unselected package libgraphite2-3:armhf.
Preparing to unpack .../032-libgraphite2-3_1.3.14-1_armhf.deb ...
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Setting up libgraphite2-3:armhf (1.3.14-1) ...
Setting up liblcms2-2:armhf (2.12~rc1-2) ...
Setting up libfile-which-perl (1.23-1) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up java-common (0.72) ...
Setting up libicu67:armhf (67.1-6) ...
Setting up libdynaloader-functions-perl (0.003-1.1) ...
Setting up libclass-method-modifiers-perl (2.13-1) ...
Setting up libio-pty-perl (1:1.15-2) ...
Setting up libmagic-mgc (1:5.39-3) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.66.4-1) ...
No schema files found: doing nothing.
Setting up libglvnd0:armhf (1.3.2-1) ...
Setting up libhtml-tagset-perl (3.20-4) ...
Setting up libdebhelper-perl (13.3.1) ...
Setting up libbrotli1:armhf (1.0.9-2+b1) ...
Setting up liblwp-mediatypes-perl (6.04-1) ...
Setting up x11-common (1:7.7+21) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: WARNING: No init system and policy-rc.d missing! Defaulting to block.
Setting up libtry-tiny-perl (0.30-1) ...
Setting up libsensors-config (1:3.6.0-5) ...
Setting up libmagic1:armhf (1:5.39-3) ...
Setting up perl-openssl-defaults:armhf (5) ...
Setting up gettext-base (0.21-3) ...
Setting up libencode-locale-perl (1.05-1.1) ...
Setting up file (1:5.39-3) ...
Setting up libasound2-data (1.2.4-1.1) ...
Setting up patchutils (0.4.2-1) ...
Setting up autotools-dev (20180224.1+nmu1) ...
Setting up libz3-4:armhf (4.8.9-1) ...
Setting up libjpeg62-turbo:armhf (1:2.0.5-2) ...
Setting up libx11-data (2:1.7.0-2) ...
Setting up libnspr4:armhf (2:4.29-1) ...
Setting up libavahi-common-data:armhf (0.8-3+b2) ...
Setting up libdbus-1-3:armhf (1.12.20-1+b3) ...
Setting up libsigsegv2:armhf (2.12-3) ...
Setting up libpng16-16:armhf (1.6.37-3) ...
Setting up libio-html-perl (1.001-1.1) ...
Setting up autopoint (0.21-3) ...
Setting up libb-hooks-op-check-perl (0.22-1+b4) ...
Setting up fonts-dejavu-core (2.37-2) ...
Setting up d-shlibs (0.98) ...
Setting up libipc-run-perl (20200505.0-1) ...
Setting up libpcsclite1:armhf (1.9.0-1) ...
Setting up ucf (3.0043) ...
Setting up libsensors5:armhf (1:3.6.0-5) ...
Setting up libglapi-mesa:armhf (20.3.2-1+rpi1) ...
Setting up libvulkan1:armhf (1.2.162.0-1) ...
Setting up libtimedate-perl (2.3300-1) ...
Setting up libgif7:armhf (5.1.9-1) ...
Setting up libxshmfence1:armhf (1.3-1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libasound2:armhf (1.2.4-1.1) ...
Setting up librole-tiny-perl (2.001004-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libstrictures-perl (2.000006-1) ...
Setting up libsub-quote-perl (2.006006-1) ...
Setting up libfile-dirlist-perl (0.05-2) ...
Setting up libfile-homedir-perl (1.006-1) ...
Setting up openssl (1.1.1i-2) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libtinfo5:armhf (6.2+20201114-2) ...
Setting up libdrm-common (2.4.103-2+rpi1) ...
Setting up mailcap (3.68) ...
Setting up libelf1:armhf (0.182-3) ...
Setting up libxml2:armhf (2.9.10+dfsg-6.3) ...
Setting up liburi-perl (5.06-1) ...
Setting up libfile-touch-perl (0.11-1) ...
Setting up dctrl-tools (2.24-3) ...
Setting up markdown (1.0.1-10.1) ...
Setting up libpython3.9-stdlib:armhf (3.9.1-2+rpi1) ...
Setting up libpython3-stdlib:armhf (3.9.1-1) ...
Setting up libnet-ssleay-perl (1.88-3+b1) ...
Setting up libfile-stripnondeterminism-perl (1.10.0-1) ...
Setting up wdiff (1.2.2-2) ...
Setting up libhttp-date-perl (6.05-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libxcb1:armhf (1.14-2.1) ...
Setting up gettext (0.21-3) ...
Setting up libxcb-xfixes0:armhf (1.14-2.1) ...
Setting up libfile-listing-perl (6.14-1) ...
Setting up mime-support (3.66) ...
Setting up libtool (2.4.6-15) ...
Setting up fontconfig-config (2.13.1-4.2) ...
Setting up libxcb-glx0:armhf (1.14-2.1) ...
Setting up libedit2:armhf (3.1-20191231-2) ...
Setting up libavahi-common3:armhf (0.8-3+b2) ...
Setting up libnet-http-perl (6.20-1) ...
Setting up m4 (1.4.18-5) ...
Setting up libnss3:armhf (2:3.60-1) ...
Setting up libxcb-shm0:armhf (1.14-2.1) ...
Setting up libdevel-callchecker-perl (0.008-1+b2) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libxcb-present0:armhf (1.14-2.1) ...
Setting up ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
126 added, 0 removed; done.
Setting up libllvm11:armhf (1:11.0.0-5+rpi1) ...
Setting up libfreetype6:armhf (2.10.4+dfsg-1) ...
Setting up libxcb-sync1:armhf (1.14-2.1) ...
Setting up autoconf (2.69-14) ...
Setting up libxcb-dri2-0:armhf (1.14-2.1) ...
Setting up dh-strip-nondeterminism (1.10.0-1) ...
Setting up libwww-robotrules-perl (6.02-1) ...
Setting up libdrm2:armhf (2.4.103-2+rpi1) ...
Setting up dwz (0.13+20201015-2) ...
Setting up groff-base (1.22.4-5) ...
Setting up libhtml-parser-perl (3.75-1+b1) ...
Setting up libx11-6:armhf (2:1.7.0-2) ...
Setting up libharfbuzz0b:armhf (2.6.7-1) ...
Setting up libfontconfig1:armhf (2.13.1-4.2) ...
Setting up libavahi-client3:armhf (0.8-3+b2) ...
Setting up libio-socket-ssl-perl (2.068-1) ...
Setting up python3.9 (3.9.1-2+rpi1) ...
Setting up libhttp-message-perl (6.27-1) ...
Setting up libdrm-amdgpu1:armhf (2.4.103-2+rpi1) ...
Setting up automake (1:1.16.3-2) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libxcb-dri3-0:armhf (1.14-2.1) ...
Setting up libx11-xcb1:armhf (2:1.7.0-2) ...
Setting up libhttp-negotiate-perl (6.01-1) ...
Setting up libdrm-nouveau2:armhf (2.4.103-2+rpi1) ...
Setting up libxdamage1:armhf (1:1.1.5-2) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libhttp-cookies-perl (6.10-1) ...
Setting up libdrm-radeon1:armhf (2.4.103-2+rpi1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libhtml-tree-perl (5.07-2) ...
Setting up libparams-classify-perl (0.015-1+b3) ...
Setting up libgl1-mesa-dri:armhf (20.3.2-1+rpi1) ...
Setting up libxext6:armhf (2:1.3.3-1.1) ...
Setting up python3 (3.9.1-1) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up libmodule-runtime-perl (0.016-1) ...
Setting up libxfixes3:armhf (1:5.0.3-2) ...
Setting up libcups2:armhf (2.3.3op1-7) ...
Setting up python3-lib2to3 (3.9.1-2) ...
Setting up python3-distutils (3.9.1-2) ...
Setting up dh-python (4.20201102) ...
Setting up libglx-mesa0:armhf (20.3.2-1+rpi1) ...
Setting up libxi6:armhf (2:1.7.10-1) ...
Setting up libglx0:armhf (1.3.2-1) ...
Setting up libimport-into-perl (1.002005-1) ...
Setting up libxtst6:armhf (2:1.2.3-1) ...
Setting up libmoo-perl (2.004004-1) ...
Setting up python3-all (3.9.1-1) ...
Setting up libgl1:armhf (1.3.2-1) ...
Setting up ca-certificates-java (20190909) ...
head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory
Adding debian:ACCVRAIZ1.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Certigna.pem
Adding debian:Certigna_Root_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Chambers_of_Commerce_Root_-_2008.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:Cybertrust_Global_Root.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DST_Root_CA_X3.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:E-Tugra_Certification_Authority.pem
Adding debian:EC-ACC.pem
Adding debian:EE_Certification_Centre_Root_CA.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:Entrust_Root_Certification_Authority_-_G4.pem
Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
Adding debian:GTS_Root_R1.pem
Adding debian:GTS_Root_R2.pem
Adding debian:GTS_Root_R3.pem
Adding debian:GTS_Root_R4.pem
Adding debian:GeoTrust_Universal_CA_2.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R2.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:GlobalSign_Root_CA_-_R6.pem
Adding debian:Global_Chambersign_Root_-_2008.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:Hongkong_Post_Root_CA_1.pem
Adding debian:Hongkong_Post_Root_CA_3.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:LuxTrust_Global_Root_2.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:Network_Solutions_Certificate_Authority.pem
Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
Adding debian:QuoVadis_Root_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Sonera_Class_2_Root_CA.pem
Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:Taiwan_GRCA.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:TrustCor_ECA-1.pem
Adding debian:TrustCor_RootCert_CA-1.pem
Adding debian:TrustCor_RootCert_CA-2.pem
Adding debian:Trustis_FPS_Root_CA.pem
Adding debian:UCA_Extended_Validation_Root.pem
Adding debian:UCA_Global_G2_Root.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:emSign_ECC_Root_CA_-_C3.pem
Adding debian:emSign_ECC_Root_CA_-_G3.pem
Adding debian:emSign_Root_CA_-_C1.pem
Adding debian:emSign_Root_CA_-_G1.pem
done.
Setting up liblwp-protocol-https-perl (6.10-1) ...
Setting up default-jre-headless (2:1.11-72+b4) ...
Setting up libwww-perl (6.52-1) ...
Setting up maven-repo-helper (1.9.4) ...
Setting up dh-autoreconf (19) ...
Setting up devscripts (2.20.5) ...
Setting up debhelper (13.3.1) ...
Setting up javahelper (0.77) ...
Processing triggers for libc-bin (2.31-5+rpi1) ...
Processing triggers for ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
done.
Setting up openjdk-11-jre-headless:armhf (11.0.10+8-1) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up openjdk-11-jre:armhf (11.0.10+8-1) ...
Setting up openjdk-11-jdk-headless:armhf (11.0.10+8-1) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
Setting up default-jre (2:1.11-72+b4) ...
Setting up default-jdk-headless (2:1.11-72+b4) ...
Setting up openjdk-11-jdk:armhf (11.0.10+8-1) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
Setting up default-jdk (2:1.11-72+b4) ...
Setting up sbuild-build-depends-ngs-sdk-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.35.1-5+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.1-1+rpi1 gcc-10_10.2.1-1+rpi1 libc6-dev_2.31-5+rpi1 libstdc++-10-dev_10.2.1-1+rpi1 libstdc++6_10.2.1-1+rpi1 linux-libc-dev_5.9.6-1+rpi1+b1
Package versions: adduser_3.118 apt_2.1.12 autoconf_2.69-14 automake_1:1.16.3-2 autopoint_0.21-3 autotools-dev_20180224.1+nmu1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1-1 binutils_2.35.1-5+rpi1 binutils-arm-linux-gnueabihf_2.35.1-5+rpi1 binutils-common_2.35.1-5+rpi1 bsdextrautils_2.36.1-2 bsdutils_1:2.36.1-2 build-essential_12.8 bzip2_1.0.8-4 ca-certificates_20200601 ca-certificates-java_20190909 coreutils_8.32-4 cpp_4:10.2.0-1+rpi1 cpp-10_10.2.1-1+rpi1 d-shlibs_0.98 dash_0.5.11+git20200708+dd9ef66-5 dctrl-tools_2.24-3 debconf_1.5.74 debhelper_13.3.1 debianutils_4.11.2 default-jdk_2:1.11-72+b4 default-jdk-headless_2:1.11-72+b4 default-jre_2:1.11-72+b4 default-jre-headless_2:1.11-72+b4 devscripts_2.20.5 dh-autoreconf_19 dh-python_4.20201102 dh-strip-nondeterminism_1.10.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13+20201015-2 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.7.0+git20201010-2 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-2 g++_4:10.2.0-1+rpi1 g++-10_10.2.1-1+rpi1 gcc_4:10.2.0-1+rpi1 gcc-10_10.2.1-1+rpi1 gcc-10-base_10.2.1-1+rpi1 gcc-6-base_6.5.0-1+rpi3 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-5+rpi1 gettext_0.21-3 gettext-base_0.21-3 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 java-common_0.72 javahelper_0.77 krb5-locales_1.18.3-4 libacl1_2.2.53-8 libapt-pkg6.0_2.1.12 libarchive-zip-perl_1.68-1 libasan6_10.2.1-1+rpi1 libasound2_1.2.4-1.1 libasound2-data_1.2.4-1.1 libassuan0_2.5.3-7.1 libatomic1_10.2.1-1+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1+b1 libavahi-client3_0.8-3+b2 libavahi-common-data_0.8-3+b2 libavahi-common3_0.8-3+b2 libb-hooks-op-check-perl_0.22-1+b4 libbinutils_2.35.1-5+rpi1 libblkid1_2.36.1-2 libbrotli1_1.0.9-2+b1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-4 libc-bin_2.31-5+rpi1 libc-dev-bin_2.31-5+rpi1 libc6_2.31-5+rpi1 libc6-dev_2.31-5+rpi1 libcap-ng0_0.7.9-2.2+b1 libcc1-0_10.2.1-1+rpi1 libclass-method-modifiers-perl_2.13-1 libcom-err2_1.45.6-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-5+rpi1 libctf0_2.35.1-5+rpi1 libcups2_2.3.3op1-7 libdb5.3_5.3.28+dfsg1-0.6 libdbus-1-3_1.12.20-1+b3 libdebconfclient0_0.255+b1 libdebhelper-perl_13.3.1 libdevel-callchecker-perl_0.008-1+b2 libdpkg-perl_1.20.5+rpi1 libdrm-amdgpu1_2.4.103-2+rpi1 libdrm-common_2.4.103-2+rpi1 libdrm-nouveau2_2.4.103-2+rpi1 libdrm-radeon1_2.4.103-2+rpi1 libdrm2_2.4.103-2+rpi1 libdynaloader-functions-perl_0.003-1.1 libedit2_3.1-20191231-2 libelf1_0.182-3 libencode-locale-perl_1.05-1.1 libexpat1_2.2.10-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1.1 libffi7_3.3-5 libfile-dirlist-perl_0.05-2 libfile-homedir-perl_1.006-1 libfile-listing-perl_6.14-1 libfile-stripnondeterminism-perl_1.10.0-1 libfile-touch-perl_0.11-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-4.2 libfreetype6_2.10.4+dfsg-1 libgcc-10-dev_10.2.1-1+rpi1 libgcc-s1_10.2.1-1+rpi1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libgif7_5.1.9-1 libgl1_1.3.2-1 libgl1-mesa-dri_20.3.2-1+rpi1 libglapi-mesa_20.3.2-1+rpi1 libglib2.0-0_2.66.4-1 libglvnd0_1.3.2-1 libglx-mesa0_20.3.2-1+rpi1 libglx0_1.3.2-1 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.7.0-5 libgomp1_10.2.1-1+rpi1 libgpg-error0_1.38-2 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.18.3-4 libharfbuzz0b_2.6.7-1 libhogweed6_3.6-2 libhtml-parser-perl_3.75-1+b1 libhtml-tagset-perl_3.20-4 libhtml-tree-perl_5.07-2 libhttp-cookies-perl_6.10-1 libhttp-date-perl_6.05-1 libhttp-message-perl_6.27-1 libhttp-negotiate-perl_6.01-1 libicu67_67.1-6 libidn2-0_2.3.0-4 libimport-into-perl_1.002005-1 libio-html-perl_1.001-1.1 libio-pty-perl_1:1.15-2 libio-socket-ssl-perl_2.068-1 libipc-run-perl_20200505.0-1 libisl23_0.23-1 libjpeg62-turbo_1:2.0.5-2 libk5crypto3_1.18.3-4 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-4 libkrb5support0_1.18.3-4 libksba8_1.5.0-2 liblcms2-2_2.12~rc1-2 libldap-2.4-2_2.4.56+dfsg-1+rpi1+b1 libldap-common_2.4.56+dfsg-1+rpi1 libllvm11_1:11.0.0-5+rpi1 liblwp-mediatypes-perl_6.04-1 liblwp-protocol-https-perl_6.10-1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmodule-runtime-perl_0.016-1 libmoo-perl_2.004004-1 libmount1_2.36.1-2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncursesw6_6.2+20201114-1 libnet-http-perl_6.20-1 libnet-ssleay-perl_1.88-3+b1 libnettle8_3.6-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnspr4_2:4.29-1 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libnss3_2:3.60-1 libp11-kit0_0.23.21-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libparams-classify-perl_0.015-1+b3 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libpcsclite1_1.9.0-1 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libpng16-16_1.6.37-3 libpython3-stdlib_3.9.1-1 libpython3.9-minimal_3.9.1-2+rpi1 libpython3.9-stdlib_3.9.1-2+rpi1 libreadline8_8.1-1 librole-tiny-perl_2.001004-1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.5.0-3+rpi1 libselinux1_3.1-2+b1 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsensors-config_1:3.6.0-5 libsensors5_1:3.6.0-5 libsepol1_3.1-1 libsigsegv2_2.12-3 libsmartcols1_2.36.1-2 libsqlite3-0_3.34.0-1 libss2_1.45.6-1 libssl1.1_1.1.1h-1 libstdc++-10-dev_10.2.1-1+rpi1 libstdc++6_10.2.1-1+rpi1 libstrictures-perl_2.000006-1 libsub-override-perl_0.09-2 libsub-quote-perl_2.006006-1 libsystemd0_246.6-4+rpi1 libtasn1-6_4.16.0-2 libtimedate-perl_2.3300-1 libtinfo5_6.2+20201114-2 libtinfo6_6.2+20201114-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-15 libtry-tiny-perl_0.30-1 libubsan1_10.2.1-1+rpi1 libuchardet0_0.0.7-1 libudev1_246.6-4+rpi1 libunistring2_0.9.10-4 liburi-perl_5.06-1 libuuid1_2.36.1-2 libvulkan1_1.2.162.0-1 libwww-perl_6.52-1 libwww-robotrules-perl_6.02-1 libx11-6_2:1.7.0-2 libx11-data_2:1.7.0-2 libx11-xcb1_2:1.7.0-2 libxau6_1:1.0.8-1+b2 libxcb-dri2-0_1.14-2.1 libxcb-dri3-0_1.14-2.1 libxcb-glx0_1.14-2.1 libxcb-present0_1.14-2.1 libxcb-shm0_1.14-2.1 libxcb-sync1_1.14-2.1 libxcb-xfixes0_1.14-2.1 libxcb1_1.14-2.1 libxdamage1_1:1.1.5-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1.1 libxfixes3_1:5.0.3-2 libxi6_2:1.7.10-1 libxml2_2.9.10+dfsg-6.3 libxrender1_1:0.9.10-1 libxshmfence1_1.3-1 libxtst6_2:1.2.3-1 libxxf86vm1_1:1.1.4-1+b2 libz3-4_4.8.9-1 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.9.6-1+rpi1+b1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-5 mailcap_3.68 make_4.3-4 man-db_2.9.3-2 markdown_1.0.1-10.1 maven-repo-helper_1.9.4 mawk_1.3.4.20200120-2 media-types_4.0.0 mime-support_3.66 mount_2.36.1-2 ncurses-base_6.2+20201114-1 ncurses-bin_6.2+20201114-1 netbase_6.2 openjdk-11-jdk_11.0.10+8-1 openjdk-11-jdk-headless_11.0.10+8-1 openjdk-11-jre_11.0.10+8-1 openjdk-11-jre-headless_11.0.10+8-1 openssl_1.1.1i-2 passwd_1:4.8.1-1 patch_2.7.6-6 patchutils_0.4.2-1 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.32_5.32.0-6 perl-openssl-defaults_5 pinentry-curses_1.1.0-4 po-debconf_1.0.21+nmu1 python3_3.9.1-1 python3-all_3.9.1-1 python3-distutils_3.9.1-2 python3-lib2to3_3.9.1-2 python3-minimal_3.9.1-1 python3.9_3.9.1-2+rpi1 python3.9-minimal_3.9.1-2+rpi1 raspbian-archive-keyring_20120528.2 readline-common_8.1-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-ngs-sdk-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.32+dfsg-1+rpi1 tzdata_2020d-1 ucf_3.0043 util-linux_2.36.1-2 wdiff_1.2.2-2 x11-common_1:7.7+21 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.ad74K3KD/trustedkeys.kbx': General error
gpgv: Signature made Sun Jan 17 18:13:46 2021 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./ngs-sdk_2.10.9-1.dsc
dpkg-source: info: extracting ngs-sdk in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking ngs-sdk_2.10.9.orig.tar.gz
dpkg-source: info: unpacking ngs-sdk_2.10.9-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying fix_jni.patch
dpkg-source: info: applying do_not_exclude_certain_architectures_explicitly.patch
dpkg-source: info: applying fallback-on-generic-atomic32.patch
dpkg-source: info: applying enable-ppc64el.patch
dpkg-source: info: applying more_archs
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-a34803bc-84bf-4ba7-a633-a1a5faa211b8
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package ngs-sdk
dpkg-buildpackage: info: source version 2.10.9-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --with python3,javahelper,jh_maven_repo_helper
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
if [ -e ngs-sdk/Makefile.config.linux.arm ] ; then \
# dh_auto_clean --sourcedirectory=ngs-sdk ; \
dh_auto_clean ; \
fi
rm -rf ngs-java/arm-linux-gnueabihf
rm -rf ngs-bam/arm-linux-gnueabihf
rm -f ngs-bam/Makefile.config
rm -f ngs-bam/Makefile.config.install.linux.x86_64.prl
rm -f ngs-bam/Makefile.config.linux.x86_64
rm -f ngs-bam/reconfigure
rm -rf ngs-sdk/ngs/unix/generic
rm -rf ngs-sdk/arm-linux-gnueabihf
rm -rf ngs-python/build
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
jh_clean
mh_clean
dh_clean
debian/rules binary-arch
dh binary-arch --with python3,javahelper,jh_maven_repo_helper
dh_update_autotools_config -a
dh_autoreconf -a
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir ngs-sdk/ngs/unix/generic && cp debian/atomic32.h ngs-sdk/ngs/unix/generic/
# # that's no standard configure script lacking support of default options \
./configure --build=arm-linux-gnueabihf --prefix=/usr -- --source=1.7
CONFIGURING ngs-sdk
Configuring NGS-SDK package
checking system type... Linux
checking OS distributor...
checking machine architecture... armv7l
configure: warning: possibly unsupported architecture armv7l on 'Linux'
checking for supported architecture... armv7l (32
bits) is supported
checking for supported OS... Linux (linux) is supported
checking for supported tool chain... gcc tool chain is supported
checking for g++... yes
checking for Python 3... /usr/bin/python3
checking whether gcc accepts -Wno-array-bounds... yes
checking whether g++ accepts -static-libstdc++... no
configure: creating 'ld.linux.exe_cmd.sh'
configure: creating 'Makefile.config.linux.armv7l'
configure: creating 'Makefile.config'
configure: creating 'reconfigure'
build type: release
build prefix: /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk
build output path: /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel
includedir: /usr/include
bindir: /usr/bin
libdir: /usr/lib
sharedir: /usr/share
CC = gcc -c
CPP = g++
configured with: "'--build=arm-linux-gnueabihf' '--prefix=/usr' '--' '--source=1.7'"
CONFIGURING ngs-java
Configuring NGS-JAVA package
checking system type... Linux
checking OS distributor...
checking machine architecture... armv7l
configure: warning: possibly unsupported architecture armv7l on 'Linux'
checking for supported architecture... armv7l (32
bits) is supported
checking for supported OS... Linux (linux) is supported
checking for supported tool chain... jdk tool chain is supported
checking for javac... yes
checking for Python 3... /usr/bin/python3
configure: creating 'Makefile.config.linux.armv7l'
configure: creating 'Makefile.config'
configure: creating 'reconfigure'
build type: release
build prefix: /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java
build output path: /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java
includedir: /usr/include
bindir: /usr/bin
libdir: /usr/lib
sharedir: /usr/share
javadir: /usr/jar
configured with: "'--build=arm-linux-gnueabihf' '--prefix=/usr' '--' '--source=1.7'"
CONFIGURING ngs-python
Configuring NGS-PYTHON package
checking system type... Linux
checking OS distributor...
checking machine architecture... armv7l
configure: warning: possibly unsupported architecture armv7l on 'Linux'
checking for supported architecture... armv7l (32
bits) is supported
checking for supported OS... Linux (linux) is supported
checking for supported tool chain... gcc tool chain is supported
checking for g++... yes
checking for Python 3... /usr/bin/python3
checking whether gcc accepts -Wno-array-bounds... yes
checking whether g++ accepts -static-libstdc++... no
checking for ngs-sdk package...
configure: optional ngs-sdk package not found: skipped.
checking for ncbi-vdb package...
configure: optional ncbi-vdb package not found: skipped.
configure: creating 'ld.linux.exe_cmd.sh'
configure: creating 'Makefile.config.linux.armv7l'
configure: creating 'Makefile.config'
configure: creating 'reconfigure'
build type: release
build prefix: /<<PKGBUILDDIR>>/ngs-python/arm-linux-gnueabihf/ngs-python
build output path: /<<PKGBUILDDIR>>/ngs-python/arm-linux-gnueabihf/ngs-python/linux/gcc/armv7l/rel
includedir: /usr/include
bindir: /usr/bin
libdir: /usr/lib
sharedir: /usr/share
pythondir: /usr
CC = gcc -c
CPP = g++
configured with: "'--build=arm-linux-gnueabihf' '--prefix=/usr' '--' '--source=1.7'"
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
jh_linkjars -a
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
#dh_auto_build --sourcedirectory=ngs-sdk
echo "DEBPKGNAME: EBPKGNAME"
DEBPKGNAME: EBPKGNAME
dh_auto_build --sourcedirectory=ngs-sdk
cd ngs-sdk && make -j4
make[2]: Entering directory '/<<PKGBUILDDIR>>/ngs-sdk'
make[3]: Entering directory '/<<PKGBUILDDIR>>/ngs-sdk/language'
make[3]: Entering directory '/<<PKGBUILDDIR>>/ngs-sdk/dispatch'
make[4]: Entering directory '/<<PKGBUILDDIR>>/ngs-sdk/language/c++'
make[3]: Entering directory '/<<PKGBUILDDIR>>/ngs-sdk/adapter'
make[4]: Entering directory '/<<PKGBUILDDIR>>/ngs-sdk/language/java'
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/ReadCollection.pic.o ReadCollection.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ReadCollectionItf.pic.o ReadCollectionItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ReadCollectionItf.pic.o ReadCollectionItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReadCollectionItf.pic.o jni_ReadCollectionItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/PileupItf.pic.o PileupItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/ReferenceSequence.pic.o ReferenceSequence.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReferenceIteratorItf.pic.o jni_ReferenceIteratorItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/PileupEventItf.pic.o PileupEventItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ReferenceItf.pic.o ReferenceItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/ReferenceIterator.pic.o ReferenceIterator.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReferenceItf.pic.o jni_ReferenceItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ReferenceItf.pic.o ReferenceItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/Reference.pic.o Reference.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ReferenceSequenceItf.pic.o ReferenceSequenceItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReferenceSequenceItf.pic.o jni_ReferenceSequenceItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/AlignmentItf.pic.o AlignmentItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ReferenceSequenceItf.pic.o ReferenceSequenceItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/PileupIterator.pic.o PileupIterator.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_PileupIteratorItf.pic.o jni_PileupIteratorItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/Pileup.pic.o Pileup.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ReadGroupItf.pic.o ReadGroupItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/PileupItf.pic.o PileupItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_PileupItf.pic.o jni_PileupItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ReadItf.pic.o ReadItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/PileupEventIterator.pic.o PileupEventIterator.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/PileupEventItf.pic.o PileupEventItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/FragmentItf.pic.o FragmentItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/PileupEvent.pic.o PileupEvent.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_PileupEventIteratorItf.pic.o jni_PileupEventIteratorItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/StatisticsItf.pic.o StatisticsItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/AlignmentItf.pic.o AlignmentItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/AlignmentIterator.pic.o AlignmentIterator.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/StringItf.pic.o StringItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_PileupEventItf.pic.o jni_PileupEventItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/Refcount.pic.o Refcount.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/Alignment.pic.o Alignment.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_AlignmentIteratorItf.pic.o jni_AlignmentIteratorItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ErrorMsg.pic.o ErrorMsg.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/ReadGroupIterator.pic.o ReadGroupIterator.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ReadGroupItf.pic.o ReadGroupItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_AlignmentItf.pic.o jni_AlignmentItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ErrBlock.pic.o ErrBlock.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/adapter -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ReadItf.pic.o ReadItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/ReadGroup.pic.o ReadGroup.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
ar rc /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-adapt-c++.a.2.10.9 /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ReadCollectionItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/PileupItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/PileupEventItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ReferenceItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ReferenceSequenceItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/AlignmentItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ReadGroupItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ReadItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/FragmentItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/StatisticsItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/StringItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/Refcount.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ErrorMsg.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/adapter/ErrBlock.pic.o
rm -f /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-adapt-c++.a.2
ln -s libngs-adapt-c++.a.2.10.9 /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-adapt-c++.a.2
rm -f /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-adapt-c++.a
ln -s libngs-adapt-c++.a.2 /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-adapt-c++.a
rm -f /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-adapt-c++-static.a
ln -s libngs-adapt-c++.a /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-adapt-c++-static.a
make[3]: Leaving directory '/<<PKGBUILDDIR>>/ngs-sdk/adapter'
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReadGroupIteratorItf.pic.o jni_ReadGroupIteratorItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/ReadIterator.pic.o ReadIterator.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
make[4]: Entering directory '/<<PKGBUILDDIR>>/ngs-sdk/language/python'
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/FragmentItf.pic.o FragmentItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_AlignmentItf.pic.o py_AlignmentItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReadGroupItf.pic.o jni_ReadGroupItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReadIteratorItf.pic.o jni_ReadIteratorItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/Read.pic.o Read.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/StatisticsItf.pic.o StatisticsItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReadItf.pic.o jni_ReadItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_AlignmentIteratorItf.pic.o py_AlignmentIteratorItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/FragmentIterator.pic.o FragmentIterator.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/PackageItf.pic.o PackageItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_FragmentItf.pic.o py_FragmentItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/Fragment.pic.o Fragment.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/StringItf.pic.o StringItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_FragmentItf.pic.o jni_FragmentItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_FragmentIteratorItf.pic.o py_FragmentIteratorItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/Statistics.pic.o Statistics.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/Refcount.pic.o Refcount.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_StatisticsItf.pic.o jni_StatisticsItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_PackageItf.pic.o py_PackageItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/VTable.pic.o VTable.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/StringRef.pic.o StringRef.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/c++ -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_Package.pic.o jni_Package.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_PileupEventItf.pic.o py_PileupEventItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ErrBlock.pic.o ErrBlock.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
ar rc /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib/libngs-bind-c++.a /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/ReadCollection.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/ReferenceSequence.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/ReferenceIterator.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/Reference.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/PileupIterator.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/Pileup.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/PileupEventIterator.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/PileupEvent.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/AlignmentIterator.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/Alignment.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/ReadGroupIterator.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/ReadGroup.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/ReadIterator.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/Read.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/FragmentIterator.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/Fragment.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/Statistics.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/c++/StringRef.pic.o
make[4]: Leaving directory '/<<PKGBUILDDIR>>/ngs-sdk/language/c++'
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ErrorMsg.pic.o ErrorMsg.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/dispatch -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_String.pic.o jni_String.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_Refcount.pic.o jni_Refcount.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_PileupEventIteratorItf.pic.o py_PileupEventIteratorItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
ar rc /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib/libngs-disp.a /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ReadCollectionItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ReferenceItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ReferenceSequenceItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/PileupItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/PileupEventItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/AlignmentItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ReadGroupItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ReadItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/FragmentItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/StatisticsItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/PackageItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/StringItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/Refcount.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/VTable.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ErrBlock.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/dispatch/ErrorMsg.pic.o
make[3]: Leaving directory '/<<PKGBUILDDIR>>/ngs-sdk/dispatch'
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_PileupItf.pic.o py_PileupItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ErrorMsg.pic.o jni_ErrorMsg.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/java -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_PileupIteratorItf.pic.o py_PileupIteratorItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
ar rc /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib/libngs-bind-java.a /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReadCollectionItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReferenceIteratorItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReferenceItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReferenceSequenceItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_PileupIteratorItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_PileupItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_PileupEventIteratorItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_PileupEventItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_AlignmentIteratorItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_AlignmentItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReadGroupIteratorItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReadGroupItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReadIteratorItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ReadItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_FragmentItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_StatisticsItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_Package.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_String.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_Refcount.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/java/jni_ErrorMsg.pic.o
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReadCollectionItf.pic.o py_ReadCollectionItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
make[4]: Leaving directory '/<<PKGBUILDDIR>>/ngs-sdk/language/java'
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReadGroupItf.pic.o py_ReadGroupItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReadGroupIteratorItf.pic.o py_ReadGroupIteratorItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReadItf.pic.o py_ReadItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReadIteratorItf.pic.o py_ReadIteratorItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReferenceItf.pic.o py_ReferenceItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReferenceIteratorItf.pic.o py_ReferenceIteratorItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReferenceSequenceItf.pic.o py_ReferenceSequenceItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_StatisticsItf.pic.o py_StatisticsItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_Refcount.pic.o py_Refcount.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_StringItf.pic.o py_StringItf.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/language/python -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
ar rc /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib/libngs-bind-python.a /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_AlignmentItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_AlignmentIteratorItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_FragmentItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_FragmentIteratorItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_PackageItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_PileupEventItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_PileupEventIteratorItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_PileupItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_PileupIteratorItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReadCollectionItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReadGroupItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReadGroupIteratorItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReadItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReadIteratorItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReferenceItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReferenceIteratorItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_ReferenceSequenceItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_StatisticsItf.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_Refcount.pic.o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/language/python/py_StringItf.pic.o
make[4]: Leaving directory '/<<PKGBUILDDIR>>/ngs-sdk/language/python'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/ngs-sdk/language'
make[3]: Entering directory '/<<PKGBUILDDIR>>/ngs-sdk'
rm -rf /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-c++
rm -rf /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-disp
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-c++
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-disp
( cd /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-c++; ar x /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib/libngs-bind-c++.a; ar t /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib/libngs-bind-c++.a | sed -e '/__\.SYMDEF/d' -e 's/^\(..*\)$/\/build\/ngs-sdk-dJdg6j\/ngs-sdk-2.10.9\/ngs-sdk\/arm-linux-gnueabihf\/ngs-sdk\/linux\/gcc\/armv7l\/rel\/obj\/ngs-bind-c++\/\1/' > /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-c++/manifest )
( cd /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-disp; ar x /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib/libngs-disp.a; ar t /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib/libngs-disp.a | sed -e '/__\.SYMDEF/d' -e 's/^\(..*\)$/\/build\/ngs-sdk-dJdg6j\/ngs-sdk-2.10.9\/ngs-sdk\/arm-linux-gnueabihf\/ngs-sdk\/linux\/gcc\/armv7l\/rel\/obj\/ngs-disp\/\1/' > /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-disp/manifest )
rm -rf /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-java
rm -rf /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-python
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-java
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-python
( cd /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-python; ar x /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib/libngs-bind-python.a; ar t /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib/libngs-bind-python.a | sed -e '/__\.SYMDEF/d' -e 's/^\(..*\)$/\/build\/ngs-sdk-dJdg6j\/ngs-sdk-2.10.9\/ngs-sdk\/arm-linux-gnueabihf\/ngs-sdk\/linux\/gcc\/armv7l\/rel\/obj\/ngs-bind-python\/\1/' > /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-python/manifest )
( cd /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-java; ar x /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib/libngs-bind-java.a; ar t /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib/libngs-bind-java.a | sed -e '/__\.SYMDEF/d' -e 's/^\(..*\)$/\/build\/ngs-sdk-dJdg6j\/ngs-sdk-2.10.9\/ngs-sdk\/arm-linux-gnueabihf\/ngs-sdk\/linux\/gcc\/armv7l\/rel\/obj\/ngs-bind-java\/\1/' > /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-java/manifest )
( ar rc /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-c++.a.2.10.9 `cat /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-c++/manifest /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-disp/manifest` )
g++ -DNDEBUG -O3 -shared -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-sdk.so.2.10.9 -Wl,-soname=libngs-sdk.so.2 `cat /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-java/manifest /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/ngs-bind-python/manifest` -L/<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib -lngs-disp
rm -f /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-c++.a.2
ln -s libngs-c++.a.2.10.9 /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-c++.a.2
rm -f /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-c++.a
ln -s libngs-c++.a.2 /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-c++.a
rm -f /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-c++-static.a
ln -s libngs-c++.a /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-c++-static.a
rm -f /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-sdk.so.2
ln -s libngs-sdk.so.2.10.9 /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-sdk.so.2
rm -f /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-sdk.so
ln -s libngs-sdk.so.2 /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-sdk.so
make[3]: Leaving directory '/<<PKGBUILDDIR>>/ngs-sdk'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/ngs-sdk'
# Remove ngs-bam generation, expects ngs-sdk and cannot find a way
# to specify it
#cd ngs-bam && LD_LIBRARY_PATH=../ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/*/rel/lib ./configure --build=arm-linux-gnueabihf --prefix=/usr --with-ngs-sdk-prefix=../ngs-sdk
#dh_auto_build --sourcedirectory=ngs-bam
dh_auto_build --sourcedirectory=ngs-java -- JAVAC="javac -source 1.7 -target 1.7"
cd ngs-java && make -j4 "JAVAC=javac -source 1.7 -target 1.7"
make[2]: Entering directory '/<<PKGBUILDDIR>>/ngs-java'
make[3]: Entering directory '/<<PKGBUILDDIR>>/ngs-java'
mkdir -p /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar
mkdir -p /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls
javac -source 1.7 -target 1.7 /<<PKGBUILDDIR>>/ngs-java//ngs/ErrorMsg.java /<<PKGBUILDDIR>>/ngs-java//ngs/Statistics.java /<<PKGBUILDDIR>>/ngs-java//ngs/Fragment.java /<<PKGBUILDDIR>>/ngs-java//ngs/FragmentIterator.java /<<PKGBUILDDIR>>/ngs-java//ngs/Read.java /<<PKGBUILDDIR>>/ngs-java//ngs/ReadIterator.java /<<PKGBUILDDIR>>/ngs-java//ngs/ReadGroup.java /<<PKGBUILDDIR>>/ngs-java//ngs/ReadGroupIterator.java /<<PKGBUILDDIR>>/ngs-java//ngs/Alignment.java /<<PKGBUILDDIR>>/ngs-java//ngs/AlignmentIterator.java /<<PKGBUILDDIR>>/ngs-java//ngs/PileupEvent.java /<<PKGBUILDDIR>>/ngs-java//ngs/PileupEventIterator.java /<<PKGBUILDDIR>>/ngs-java//ngs/Pileup.java /<<PKGBUILDDIR>>/ngs-java//ngs/PileupIterator.java /<<PKGBUILDDIR>>/ngs-java//ngs/Reference.java /<<PKGBUILDDIR>>/ngs-java//ngs/ReferenceIterator.java /<<PKGBUILDDIR>>/ngs-java//ngs/ReadCollection.java /<<PKGBUILDDIR>>/ngs-java//ngs/Package.java -d /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls -classpath /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls -sourcepath /<<PKGBUILDDIR>>/ngs-java/:/<<PKGBUILDDIR>>/ngs-java//itf:/<<PKGBUILDDIR>>/ngs-java/gov/nih/nlm/ncbi/ngs && touch /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls/ngs-java-api
( cd /<<PKGBUILDDIR>>/ngs-java/; jar cf /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/ngs-src.jar `find gov ngs -name "*.java"`; chmod -x,o-w,g+w /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/ngs-src.jar ) || ( rm -f /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/ngs-src.jar && false )
Generating javadocs...
javac -source 1.7 -target 1.7 /<<PKGBUILDDIR>>/ngs-java/examples/examples/AlignTest.java /<<PKGBUILDDIR>>/ngs-java/examples/examples/AlignSliceTest.java /<<PKGBUILDDIR>>/ngs-java/examples/examples/FragTest.java /<<PKGBUILDDIR>>/ngs-java/examples/examples/PileupTest.java /<<PKGBUILDDIR>>/ngs-java/examples/examples/RefTest.java /<<PKGBUILDDIR>>/ngs-java/examples/examples/ReadGroupTest.java -d /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls -classpath /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls -sourcepath /<<PKGBUILDDIR>>/ngs-java/:/<<PKGBUILDDIR>>/ngs-java//itf:/<<PKGBUILDDIR>>/ngs-java/gov/nih/nlm/ncbi/ngs && touch /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls/ngs-examples
warning: [options] bootstrap class path not set in conjunction with -source 7
warning: [options] bootstrap class path not set in conjunction with -source 7
1 warning
javac -source 1.7 -target 1.7 /<<PKGBUILDDIR>>/ngs-java//ngs/itf/Refcount.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/StatisticsItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/FragmentItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/FragmentIteratorItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/ReadItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/ReadIteratorItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/ReadGroupItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/ReadGroupIteratorItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/AlignmentItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/AlignmentIteratorItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/PileupEventItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/PileupEventIteratorItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/PileupItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/PileupIteratorItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/ReferenceItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/ReferenceIteratorItf.java /<<PKGBUILDDIR>>/ngs-java//ngs/itf/ReadCollectionItf.java -d /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls -classpath /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls -sourcepath /<<PKGBUILDDIR>>/ngs-java/:/<<PKGBUILDDIR>>/ngs-java//itf:/<<PKGBUILDDIR>>/ngs-java/gov/nih/nlm/ncbi/ngs && touch /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls/ngs-java-itf
warning: [options] bootstrap class path not set in conjunction with -source 7
Creating destination directory: "/<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/javadoc/"
Note: /<<PKGBUILDDIR>>/ngs-java/ngs/itf/Refcount.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
1 warning
javac -source 1.7 -target 1.7 /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/DownloadManager.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/FileCreator.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/HttpManager.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/LibDependencies.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/LibManager.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/LibPathIterator.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/LibVersionChecker.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/LMProperties.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/Logger.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/Manager.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/NGS.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/Version.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/error/LibraryLoadError.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/error/LibraryNotFoundError.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/error/LibraryIncompatibleVersionError.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/error/cause/ConnectionProblemCause.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/error/cause/DownloadDisabledCause.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/error/cause/InvalidLibraryCause.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/error/cause/JvmErrorCause.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/error/cause/LibraryLoadCause.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/error/cause/OutdatedJarCause.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/error/cause/PrereleaseReqLibCause.java /<<PKGBUILDDIR>>/ngs-java//gov/nih/nlm/ncbi/ngs/error/cause/UnsupportedArchCause.java -d /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls -classpath /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls -sourcepath /<<PKGBUILDDIR>>/ngs-java/:/<<PKGBUILDDIR>>/ngs-java//itf:/<<PKGBUILDDIR>>/ngs-java/gov/nih/nlm/ncbi/ngs && touch /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls/ngs-java-ncbi
Note: /<<PKGBUILDDIR>>/ngs-java/ngs/itf/Refcount.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
1 warning
( cd /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls; jar cf /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/ngs-examples.jar `find examples -name "*.class"`; chmod -x,o-w,g+w /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/ngs-examples.jar ) || ( rm -f /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/ngs-examples.jar && false )
warning: [options] bootstrap class path not set in conjunction with -source 7
( cd /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/javadoc ; jar cf /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/ngs-doc.jar `find . -type f`; chmod -x,o-w,g+w /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/ngs-doc.jar ) || ( rm -f /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/ngs-doc.jar && false )
1 warning
( cd /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/cls; jar cf /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/ngs-java.jar `find . -name "*.class"`; chmod -x,o-w,g+w /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/ngs-java.jar ) || ( rm -f /<<PKGBUILDDIR>>/ngs-java/arm-linux-gnueabihf/ngs-java/jar/ngs-java.jar && false )
make[3]: Leaving directory '/<<PKGBUILDDIR>>/ngs-java'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/ngs-java'
markdown README.md > README.html
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make -C ngs-sdk/test
make[2]: Entering directory '/<<PKGBUILDDIR>>/ngs-sdk/test'
make[3]: Entering directory '/<<PKGBUILDDIR>>/ngs-sdk/test/test_engine'
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/test/test_engine
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/test/test_engine/test_engine.pic.o test_engine.cpp -fPIC -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/test/test_engine -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -DNDEBUG -O3 --shared -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libtest_engine.so /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/test/test_engine/test_engine.pic.o -L/<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib -L/<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib -lngs-adapt-c++ -lngs-bind-c++ -lngs-disp
make[3]: Leaving directory '/<<PKGBUILDDIR>>/ngs-sdk/test/test_engine'
make[3]: Entering directory '/<<PKGBUILDDIR>>/ngs-sdk/test/ngs-test'
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/bin
mkdir -p /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/test/ngs-test
g++ -c -std=c++11 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/test/ngs-test/main.o main.cpp -DNDEBUG -O3 -I. -I/<<PKGBUILDDIR>>/ngs-sdk/test/ngs-test -I/<<PKGBUILDDIR>>/ngs-sdk -I/<<PKGBUILDDIR>>/ngs-sdk/ngs/unix/generic -MD
g++ -DNDEBUG -O3 -o /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/bin/test-ngs /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/obj/test/ngs-test/main.o -L/<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib -L/<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/ilib -ltest_engine -lngs-bind-c++ -lngs-disp
make[3]: Leaving directory '/<<PKGBUILDDIR>>/ngs-sdk/test/ngs-test'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/ngs-sdk/test'
# Tests of Java binding disabled because need external lib ncbi-vdb,
# not available in Debian at this time
#CLASSPATH=../arm-linux-gnueabihf/ngs-java/jar/ngs-java.jar LD_LIBRARY_PATH=ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/*/rel/lib: make -C ngs-java/examples
#CLASSPATH=../arm-linux-gnueabihf/ngs-java/jar/ngs-java.jar LD_LIBRARY_PATH=../../ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/*/rel/lib: make -C ngs-java/examples run_all
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_prep -a
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
d-shlibmove --commit \
--multiarch \
--devunversioned \
--exclude-a \
--exclude-la \
--movedev "ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/*/rel/lib/*.a*" usr/lib/arm-linux-gnueabihf \
--movedev "ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/*/rel/ilib/*.a" usr/lib/arm-linux-gnueabihf \
--movedev ngs-sdk/ngs usr/include \
ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/*/rel/lib/libngs-sdk.so
Library package automatic movement utility
set -e
install -d -m 755 debian/libngs-sdk-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/libngs-sdk2/usr/lib/arm-linux-gnueabihf
mv ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-sdk.so debian/libngs-sdk-dev/usr/lib/arm-linux-gnueabihf
mv /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-sdk.so.2 debian/libngs-sdk2/usr/lib/arm-linux-gnueabihf
mv /<<PKGBUILDDIR>>/ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/armv7l/rel/lib/libngs-sdk.so.2.10.9 debian/libngs-sdk2/usr/lib/arm-linux-gnueabihf
PKGDEV=libngs-sdk-dev
PKGSHL=libngs-sdk2
install -d -m 755 debian/libngs-sdk-dev/usr/lib/arm-linux-gnueabihf
mv ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/*/rel/lib/*.a* debian/libngs-sdk-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/libngs-sdk-dev/usr/lib/arm-linux-gnueabihf
mv ngs-sdk/arm-linux-gnueabihf/ngs-sdk/linux/gcc/*/rel/ilib/*.a debian/libngs-sdk-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/libngs-sdk-dev/usr/include
mv ngs-sdk/ngs debian/libngs-sdk-dev/usr/include
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install -ppython3-ngs
set -e && for i in 3.9; do \
cd ngs-python ; \
python$i ./setup.py install --install-layout=deb --root ../debian/python3-ngs; \
cd .. ; \
done
/usr/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'include_package_data'
warnings.warn(msg)
running install
running build
running build_py
creating build
creating build/lib
creating build/lib/ngs
copying ngs/Alignment.py -> build/lib/ngs
copying ngs/AlignmentIterator.py -> build/lib/ngs
copying ngs/ErrorMsg.py -> build/lib/ngs
copying ngs/Fragment.py -> build/lib/ngs
copying ngs/FragmentIterator.py -> build/lib/ngs
copying ngs/LibChecker.py -> build/lib/ngs
copying ngs/LibManager.py -> build/lib/ngs
copying ngs/Package.py -> build/lib/ngs
copying ngs/Pileup.py -> build/lib/ngs
copying ngs/PileupEvent.py -> build/lib/ngs
copying ngs/PileupEventIterator.py -> build/lib/ngs
copying ngs/PileupIterator.py -> build/lib/ngs
copying ngs/Read.py -> build/lib/ngs
copying ngs/ReadCollection.py -> build/lib/ngs
copying ngs/ReadGroup.py -> build/lib/ngs
copying ngs/ReadGroupIterator.py -> build/lib/ngs
copying ngs/ReadIterator.py -> build/lib/ngs
copying ngs/Refcount.py -> build/lib/ngs
copying ngs/Reference.py -> build/lib/ngs
copying ngs/ReferenceIterator.py -> build/lib/ngs
copying ngs/ReferenceSequence.py -> build/lib/ngs
copying ngs/Statistics.py -> build/lib/ngs
copying ngs/String.py -> build/lib/ngs
copying ngs/__init__.py -> build/lib/ngs
running install_lib
creating ../debian/python3-ngs
creating ../debian/python3-ngs/usr
creating ../debian/python3-ngs/usr/lib
creating ../debian/python3-ngs/usr/lib/python3
creating ../debian/python3-ngs/usr/lib/python3/dist-packages
creating ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/Alignment.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/AlignmentIterator.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/ErrorMsg.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/Fragment.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/FragmentIterator.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/LibChecker.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/LibManager.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/Package.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/Pileup.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/PileupEvent.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/PileupEventIterator.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/PileupIterator.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/Read.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/ReadCollection.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/ReadGroup.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/ReadGroupIterator.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/ReadIterator.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/Refcount.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/Reference.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/ReferenceIterator.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/ReferenceSequence.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/Statistics.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/String.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
copying build/lib/ngs/__init__.py -> ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/Alignment.py to Alignment.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/AlignmentIterator.py to AlignmentIterator.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/ErrorMsg.py to ErrorMsg.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/Fragment.py to Fragment.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/FragmentIterator.py to FragmentIterator.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/LibChecker.py to LibChecker.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/LibManager.py to LibManager.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/Package.py to Package.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/Pileup.py to Pileup.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/PileupEvent.py to PileupEvent.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/PileupEventIterator.py to PileupEventIterator.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/PileupIterator.py to PileupIterator.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/Read.py to Read.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/ReadCollection.py to ReadCollection.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/ReadGroup.py to ReadGroup.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/ReadGroupIterator.py to ReadGroupIterator.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/ReadIterator.py to ReadIterator.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/Refcount.py to Refcount.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/Reference.py to Reference.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/ReferenceIterator.py to ReferenceIterator.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/ReferenceSequence.py to ReferenceSequence.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/Statistics.py to Statistics.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/String.py to String.cpython-39.pyc
byte-compiling ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs/__init__.py to __init__.cpython-39.pyc
running install_egg_info
Writing ../debian/python3-ngs/usr/lib/python3/dist-packages/ngs-1.0.egg-info
find debian -name "*.pyc" -delete
find debian -type d -name __pycache__ | xargs rm -rf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
jh_installjavadoc -a
dh_installdocs -a
dh_installchangelogs -a
dh_python3 -a
dh_perl -a
dh_link -a
jh_installlibs -a
jh_classpath -a
jh_manifest -a
jh_depends -a
mh_installpoms -a
mh_linkjars --skip-clean-poms -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_dwz -a -a
dwz: debian/libngs-sdk2/usr/lib/arm-linux-gnueabihf/libngs-sdk.so.2.10.9: .debug_info section not present
dh_strip -a -a
dh_makeshlibs -a -a
dh_shlibdeps -a -a
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libngs-sdk2/usr/lib/arm-linux-gnueabihf/libngs-sdk.so.2.10.9 found in none of the libraries
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'python3-ngs' in '../python3-ngs_2.10.9-1_armhf.deb'.
dpkg-deb: building package 'libngs-sdk2' in '../libngs-sdk2_2.10.9-1_armhf.deb'.
dpkg-deb: building package 'libngs-sdk-dev' in '../libngs-sdk-dev_2.10.9-1_armhf.deb'.
dpkg-deb: building package 'libngs-sdk2-dbgsym' in '../libngs-sdk2-dbgsym_2.10.9-1_armhf.deb'.
dpkg-deb: building package 'libngs-java' in '../libngs-java_2.10.9-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../ngs-sdk_2.10.9-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2021-01-23T06:23:47Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
ngs-sdk_2.10.9-1_armhf.changes:
-------------------------------
Format: 1.8
Date: Sun, 17 Jan 2021 18:52:56 +0100
Source: ngs-sdk
Binary: libngs-java libngs-sdk-dev libngs-sdk2 libngs-sdk2-dbgsym python3-ngs
Architecture: armhf
Version: 2.10.9-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
libngs-java - Next Generation Sequencing language Bindings (Java bindings)
libngs-sdk-dev - Next Generation Sequencing language Bindings (development)
libngs-sdk2 - Next Generation Sequencing language Bindings
python3-ngs - Next Generation Sequencing language Bindings (Python3 bindings)
Changes:
ngs-sdk (2.10.9-1) unstable; urgency=medium
.
* New upstream version
* Standards-Version: 4.5.1 (routine-update)
* debhelper-compat 13 (routine-update)
* watch file standard 4 (routine-update)
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Files:
c3c17b9a6cd54b10af10f2b578a17a39 80364 java optional libngs-java_2.10.9-1_armhf.deb
010de3aa38ab6b75dbe784f352a20370 91120 libdevel optional libngs-sdk-dev_2.10.9-1_armhf.deb
df37482e604fddf91ed971f77cc06d26 10696 debug optional libngs-sdk2-dbgsym_2.10.9-1_armhf.deb
f3cbf54246c624be3e3c77feb555be04 45128 libs optional libngs-sdk2_2.10.9-1_armhf.deb
c857eec4e7ddca71cb4e3ab5575404d0 10939 science optional ngs-sdk_2.10.9-1_armhf.buildinfo
67e7b67cca3e40995ba1522ce2fe8882 19916 python optional python3-ngs_2.10.9-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libngs-java_2.10.9-1_armhf.deb
------------------------------
new Debian package, version 2.0.
size 80364 bytes: control archive=1104 bytes.
1034 bytes, 25 lines control
506 bytes, 6 lines md5sums
Package: libngs-java
Source: ngs-sdk
Version: 2.10.9-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 110
Depends: libngs-sdk-dev (= 2.10.9-1)
Section: java
Priority: optional
Multi-Arch: same
Homepage: https://github.com/ncbi/ngs
Description: Next Generation Sequencing language Bindings (Java bindings)
NGS is a new, domain-specific API for accessing reads, alignments and
pileups produced from Next Generation Sequencing. The API itself is
independent from any particular back-end implementation, and supports
use of multiple back-ends simultaneously. It also provides a library for
building new back-end "engines". The engine for accessing SRA data is
contained within the sister repository ncbi-vdb.
.
The API is currently expressed in C++, Java and Python languages. The
design makes it possible to maintain a high degree of similarity between
the code in one language and code in another - especially between C++
and Java.
.
Java bindings.
drwxr-xr-x root/root 0 2021-01-17 17:52 ./
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/doc/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/doc/libngs-java/
-rw-r--r-- root/root 1818 2021-01-17 17:52 ./usr/share/doc/libngs-java/changelog.Debian.gz
-rw-r--r-- root/root 2219 2020-12-16 17:49 ./usr/share/doc/libngs-java/changelog.gz
-rw-r--r-- root/root 3377 2021-01-17 17:52 ./usr/share/doc/libngs-java/copyright
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/java/
-rw-r--r-- root/root 82143 2021-01-17 17:52 ./usr/share/java/ngs-java-2.10.9.jar
lrwxrwxrwx root/root 0 2021-01-17 17:52 ./usr/share/java/ngs-java.jar -> ngs-java-2.10.9.jar
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/maven-repo/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/maven-repo/gov/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/maven-repo/gov/nih/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/maven-repo/gov/nih/nlm/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/maven-repo/gov/nih/nlm/ncbi/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/maven-repo/gov/nih/nlm/ncbi/ngs-java/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/maven-repo/gov/nih/nlm/ncbi/ngs-java/1.2.4/
lrwxrwxrwx root/root 0 2021-01-17 17:52 ./usr/share/maven-repo/gov/nih/nlm/ncbi/ngs-java/1.2.4/ngs-java-1.2.4.jar -> ../../../../../../../java/ngs-java.jar
-rw-r--r-- root/root 683 2021-01-17 17:52 ./usr/share/maven-repo/gov/nih/nlm/ncbi/ngs-java/1.2.4/ngs-java-1.2.4.pom
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/maven-repo/gov/nih/nlm/ncbi/ngs-java/debian/
lrwxrwxrwx root/root 0 2021-01-17 17:52 ./usr/share/maven-repo/gov/nih/nlm/ncbi/ngs-java/debian/ngs-java-debian.jar -> ../../../../../../../java/ngs-java.jar
-rw-r--r-- root/root 684 2021-01-17 17:52 ./usr/share/maven-repo/gov/nih/nlm/ncbi/ngs-java/debian/ngs-java-debian.pom
libngs-sdk-dev_2.10.9-1_armhf.deb
---------------------------------
new Debian package, version 2.0.
size 91120 bytes: control archive=3348 bytes.
1055 bytes, 25 lines control
6993 bytes, 99 lines md5sums
Package: libngs-sdk-dev
Source: ngs-sdk
Version: 2.10.9-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1176
Depends: libngs-sdk2 (= 2.10.9-1)
Section: libdevel
Priority: optional
Multi-Arch: same
Homepage: https://github.com/ncbi/ngs
Description: Next Generation Sequencing language Bindings (development)
NGS is a new, domain-specific API for accessing reads, alignments and
pileups produced from Next Generation Sequencing. The API itself is
independent from any particular back-end implementation, and supports
use of multiple back-ends simultaneously. It also provides a library for
building new back-end "engines". The engine for accessing SRA data is
contained within the sister repository ncbi-vdb.
.
The API is currently expressed in C++, Java and Python languages. The
design makes it possible to maintain a high degree of similarity between
the code in one language and code in another - especially between C++
and Java.
.
This is the development package.
drwxr-xr-x root/root 0 2021-01-17 17:52 ./
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/include/
drwxr-xr-x root/root 0 2020-12-16 17:49 ./usr/include/ngs/
-rw-r--r-- root/root 9154 2020-12-16 17:49 ./usr/include/ngs/Alignment.hpp
-rw-r--r-- root/root 2746 2020-12-16 17:49 ./usr/include/ngs/AlignmentIterator.hpp
-rw-r--r-- root/root 1398 2020-12-16 17:49 ./usr/include/ngs/ErrorMsg.hpp
-rw-r--r-- root/root 3945 2020-12-16 17:49 ./usr/include/ngs/Fragment.hpp
-rw-r--r-- root/root 2645 2020-12-16 17:49 ./usr/include/ngs/FragmentIterator.hpp
-rw-r--r-- root/root 2149 2020-12-16 17:49 ./usr/include/ngs/Package.hpp
-rw-r--r-- root/root 3181 2020-12-16 17:49 ./usr/include/ngs/Pileup.hpp
-rw-r--r-- root/root 8631 2020-12-16 17:49 ./usr/include/ngs/PileupEvent.hpp
-rw-r--r-- root/root 3028 2020-12-16 17:49 ./usr/include/ngs/PileupEventIterator.hpp
-rw-r--r-- root/root 2697 2020-12-16 17:49 ./usr/include/ngs/PileupIterator.hpp
-rw-r--r-- root/root 4363 2020-12-16 17:49 ./usr/include/ngs/Read.hpp
-rw-r--r-- root/root 7394 2020-12-16 17:49 ./usr/include/ngs/ReadCollection.hpp
-rw-r--r-- root/root 2742 2020-12-16 17:49 ./usr/include/ngs/ReadGroup.hpp
-rw-r--r-- root/root 2751 2020-12-16 17:49 ./usr/include/ngs/ReadGroupIterator.hpp
-rw-r--r-- root/root 2606 2020-12-16 17:49 ./usr/include/ngs/ReadIterator.hpp
-rw-r--r-- root/root 8877 2020-12-16 17:49 ./usr/include/ngs/Reference.hpp
-rw-r--r-- root/root 2735 2020-12-16 17:49 ./usr/include/ngs/ReferenceIterator.hpp
-rw-r--r-- root/root 3896 2020-12-16 17:49 ./usr/include/ngs/ReferenceSequence.hpp
-rw-r--r-- root/root 3743 2020-12-16 17:49 ./usr/include/ngs/Statistics.hpp
-rw-r--r-- root/root 3624 2020-12-16 17:49 ./usr/include/ngs/StringRef.hpp
drwxr-xr-x root/root 0 2020-12-16 17:49 ./usr/include/ngs/adapter/
-rw-r--r-- root/root 6854 2020-12-16 17:49 ./usr/include/ngs/adapter/AlignmentItf.hpp
-rw-r--r-- root/root 2743 2020-12-16 17:49 ./usr/include/ngs/adapter/ErrorMsg.hpp
-rw-r--r-- root/root 2784 2020-12-16 17:49 ./usr/include/ngs/adapter/FragmentItf.hpp
-rw-r--r-- root/root 4228 2020-12-16 17:49 ./usr/include/ngs/adapter/PileupEventItf.hpp
-rw-r--r-- root/root 3325 2020-12-16 17:49 ./usr/include/ngs/adapter/PileupItf.hpp
-rw-r--r-- root/root 5656 2020-12-16 17:49 ./usr/include/ngs/adapter/ReadCollectionItf.hpp
-rw-r--r-- root/root 2452 2020-12-16 17:49 ./usr/include/ngs/adapter/ReadGroupItf.hpp
-rw-r--r-- root/root 3833 2020-12-16 17:49 ./usr/include/ngs/adapter/ReadItf.hpp
-rw-r--r-- root/root 3943 2020-12-16 17:49 ./usr/include/ngs/adapter/Refcount.hpp
-rw-r--r-- root/root 5973 2020-12-16 17:49 ./usr/include/ngs/adapter/ReferenceItf.hpp
-rw-r--r-- root/root 3044 2020-12-16 17:49 ./usr/include/ngs/adapter/ReferenceSequenceItf.hpp
-rw-r--r-- root/root 3100 2020-12-16 17:49 ./usr/include/ngs/adapter/StatisticsItf.hpp
-rw-r--r-- root/root 2814 2020-12-16 17:49 ./usr/include/ngs/adapter/StringItf.hpp
-rw-r--r-- root/root 1829 2020-12-16 17:49 ./usr/include/ngs/adapter/defs.h
drwxr-xr-x root/root 0 2020-12-16 17:49 ./usr/include/ngs/inl/
-rw-r--r-- root/root 5619 2020-12-16 17:49 ./usr/include/ngs/inl/Alignment.hpp
-rw-r--r-- root/root 1977 2020-12-16 17:49 ./usr/include/ngs/inl/AlignmentIterator.hpp
-rw-r--r-- root/root 3090 2020-12-16 17:49 ./usr/include/ngs/inl/Fragment.hpp
-rw-r--r-- root/root 1785 2020-12-16 17:49 ./usr/include/ngs/inl/FragmentIterator.hpp
-rw-r--r-- root/root 1732 2020-12-16 17:49 ./usr/include/ngs/inl/Package.hpp
-rw-r--r-- root/root 2327 2020-12-16 17:49 ./usr/include/ngs/inl/Pileup.hpp
-rw-r--r-- root/root 3535 2020-12-16 17:49 ./usr/include/ngs/inl/PileupEvent.hpp
-rw-r--r-- root/root 1961 2020-12-16 17:49 ./usr/include/ngs/inl/PileupEventIterator.hpp
-rw-r--r-- root/root 1923 2020-12-16 17:49 ./usr/include/ngs/inl/PileupIterator.hpp
-rw-r--r-- root/root 3701 2020-12-16 17:49 ./usr/include/ngs/inl/Read.hpp
-rw-r--r-- root/root 5495 2020-12-16 17:49 ./usr/include/ngs/inl/ReadCollection.hpp
-rw-r--r-- root/root 1910 2020-12-16 17:49 ./usr/include/ngs/inl/ReadGroup.hpp
-rw-r--r-- root/root 1787 2020-12-16 17:49 ./usr/include/ngs/inl/ReadGroupIterator.hpp
-rw-r--r-- root/root 1825 2020-12-16 17:49 ./usr/include/ngs/inl/ReadIterator.hpp
-rw-r--r-- root/root 6401 2020-12-16 17:49 ./usr/include/ngs/inl/Reference.hpp
-rw-r--r-- root/root 1795 2020-12-16 17:49 ./usr/include/ngs/inl/ReferenceIterator.hpp
-rw-r--r-- root/root 2950 2020-12-16 17:49 ./usr/include/ngs/inl/ReferenceSequence.hpp
-rw-r--r-- root/root 2690 2020-12-16 17:49 ./usr/include/ngs/inl/Statistics.hpp
-rw-r--r-- root/root 2179 2020-12-16 17:49 ./usr/include/ngs/inl/StringRef.hpp
drwxr-xr-x root/root 0 2020-12-16 17:49 ./usr/include/ngs/itf/
-rw-r--r-- root/root 4369 2020-12-16 17:49 ./usr/include/ngs/itf/AlignmentItf.h
-rw-r--r-- root/root 3915 2020-12-16 17:49 ./usr/include/ngs/itf/AlignmentItf.hpp
-rw-r--r-- root/root 1735 2020-12-16 17:49 ./usr/include/ngs/itf/ErrBlock.h
-rw-r--r-- root/root 2052 2020-12-16 17:49 ./usr/include/ngs/itf/ErrBlock.hpp
-rw-r--r-- root/root 2703 2020-12-16 17:49 ./usr/include/ngs/itf/ErrorMsg.hpp
-rw-r--r-- root/root 2404 2020-12-16 17:49 ./usr/include/ngs/itf/FragmentItf.h
-rw-r--r-- root/root 2702 2020-12-16 17:49 ./usr/include/ngs/itf/FragmentItf.hpp
-rw-r--r-- root/root 1806 2020-12-16 17:49 ./usr/include/ngs/itf/PackageItf.hpp
-rw-r--r-- root/root 3234 2020-12-16 17:49 ./usr/include/ngs/itf/PileupEventItf.h
-rw-r--r-- root/root 2959 2020-12-16 17:49 ./usr/include/ngs/itf/PileupEventItf.hpp
-rw-r--r-- root/root 2387 2020-12-16 17:49 ./usr/include/ngs/itf/PileupItf.h
-rw-r--r-- root/root 2175 2020-12-16 17:49 ./usr/include/ngs/itf/PileupItf.hpp
-rw-r--r-- root/root 4159 2020-12-16 17:49 ./usr/include/ngs/itf/ReadCollectionItf.h
-rw-r--r-- root/root 3531 2020-12-16 17:49 ./usr/include/ngs/itf/ReadCollectionItf.hpp
-rw-r--r-- root/root 2190 2020-12-16 17:49 ./usr/include/ngs/itf/ReadGroupItf.h
-rw-r--r-- root/root 2292 2020-12-16 17:49 ./usr/include/ngs/itf/ReadGroupItf.hpp
-rw-r--r-- root/root 2634 2020-12-16 17:49 ./usr/include/ngs/itf/ReadItf.h
-rw-r--r-- root/root 2910 2020-12-16 17:49 ./usr/include/ngs/itf/ReadItf.hpp
-rw-r--r-- root/root 1930 2020-12-16 17:49 ./usr/include/ngs/itf/Refcount.h
-rw-r--r-- root/root 3440 2020-12-16 17:49 ./usr/include/ngs/itf/Refcount.hpp
-rw-r--r-- root/root 4991 2020-12-16 17:49 ./usr/include/ngs/itf/ReferenceItf.h
-rw-r--r-- root/root 4259 2020-12-16 17:49 ./usr/include/ngs/itf/ReferenceItf.hpp
-rw-r--r-- root/root 2584 2020-12-16 17:49 ./usr/include/ngs/itf/ReferenceSequenceItf.h
-rw-r--r-- root/root 2549 2020-12-16 17:49 ./usr/include/ngs/itf/ReferenceSequenceItf.hpp
-rw-r--r-- root/root 2458 2020-12-16 17:49 ./usr/include/ngs/itf/StatisticsItf.h
-rw-r--r-- root/root 2372 2020-12-16 17:49 ./usr/include/ngs/itf/StatisticsItf.hpp
-rw-r--r-- root/root 2012 2020-12-16 17:49 ./usr/include/ngs/itf/StringItf.h
-rw-r--r-- root/root 2047 2020-12-16 17:49 ./usr/include/ngs/itf/StringItf.hpp
-rw-r--r-- root/root 2614 2020-12-16 17:49 ./usr/include/ngs/itf/VTable.h
-rw-r--r-- root/root 3595 2020-12-16 17:49 ./usr/include/ngs/itf/VTable.hpp
-rw-r--r-- root/root 2387 2020-12-16 17:49 ./usr/include/ngs/itf/defs.h
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/include/ngs/unix/
drwxr-xr-x root/root 0 2020-12-16 17:49 ./usr/include/ngs/unix/fat86/
-rw-r--r-- root/root 1457 2020-12-16 17:49 ./usr/include/ngs/unix/fat86/atomic32.h
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/include/ngs/unix/generic/
-rw-r--r-- root/root 2603 2021-01-17 17:52 ./usr/include/ngs/unix/generic/atomic32.h
drwxr-xr-x root/root 0 2020-12-16 17:49 ./usr/include/ngs/unix/i386/
-rw-r--r-- root/root 8379 2020-12-16 17:49 ./usr/include/ngs/unix/i386/atomic32.h
drwxr-xr-x root/root 0 2020-12-16 17:49 ./usr/include/ngs/unix/x86_64/
-rw-r--r-- root/root 8378 2020-12-16 17:49 ./usr/include/ngs/unix/x86_64/atomic32.h
drwxr-xr-x root/root 0 2020-12-16 17:49 ./usr/include/ngs/win/
-rw-r--r-- root/root 2623 2020-12-16 17:49 ./usr/include/ngs/win/atomic32.h
-rw-r--r-- root/root 1508 2020-12-16 17:49 ./usr/include/ngs/win/stdbool.h
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/lib/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-adapt-c++-static.a -> libngs-adapt-c++.a
lrwxrwxrwx root/root 0 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-adapt-c++.a -> libngs-adapt-c++.a.2
lrwxrwxrwx root/root 0 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-adapt-c++.a.2 -> libngs-adapt-c++.a.2.10.9
-rw-r--r-- root/root 109828 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-adapt-c++.a.2.10.9
-rw-r--r-- root/root 54620 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-bind-c++.a
-rw-r--r-- root/root 158328 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-bind-java.a
-rw-r--r-- root/root 143084 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-bind-python.a
lrwxrwxrwx root/root 0 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-c++-static.a -> libngs-c++.a
lrwxrwxrwx root/root 0 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-c++.a -> libngs-c++.a.2
lrwxrwxrwx root/root 0 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-c++.a.2 -> libngs-c++.a.2.10.9
-rw-r--r-- root/root 207046 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-c++.a.2.10.9
-rw-r--r-- root/root 148080 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-disp.a
lrwxrwxrwx root/root 0 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-sdk.so -> libngs-sdk.so.2
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/doc/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/doc/libngs-sdk-dev/
-rw-r--r-- root/root 1818 2021-01-17 17:52 ./usr/share/doc/libngs-sdk-dev/changelog.Debian.gz
-rw-r--r-- root/root 2219 2020-12-16 17:49 ./usr/share/doc/libngs-sdk-dev/changelog.gz
-rw-r--r-- root/root 3377 2021-01-17 17:52 ./usr/share/doc/libngs-sdk-dev/copyright
libngs-sdk2-dbgsym_2.10.9-1_armhf.deb
-------------------------------------
new Debian package, version 2.0.
size 10696 bytes: control archive=552 bytes.
400 bytes, 13 lines control
106 bytes, 1 lines md5sums
Package: libngs-sdk2-dbgsym
Source: ngs-sdk
Version: 2.10.9-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 58
Depends: libngs-sdk2 (= 2.10.9-1)
Section: debug
Priority: optional
Multi-Arch: same
Description: debug symbols for libngs-sdk2
Build-Ids: f4487783afd3225161bf66d1dbd15e27263836f7
drwxr-xr-x root/root 0 2021-01-17 17:52 ./
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/lib/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/lib/debug/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/lib/debug/.build-id/f4/
-rw-r--r-- root/root 48328 2021-01-17 17:52 ./usr/lib/debug/.build-id/f4/487783afd3225161bf66d1dbd15e27263836f7.debug
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/share/doc/
lrwxrwxrwx root/root 0 2021-01-17 17:52 ./usr/share/doc/libngs-sdk2-dbgsym -> libngs-sdk2
libngs-sdk2_2.10.9-1_armhf.deb
------------------------------
new Debian package, version 2.0.
size 45128 bytes: control archive=1176 bytes.
1027 bytes, 23 lines control
378 bytes, 5 lines md5sums
37 bytes, 1 lines shlibs
67 bytes, 2 lines triggers
Package: libngs-sdk2
Source: ngs-sdk
Version: 2.10.9-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 240
Depends: libc6 (>= 2.4), libgcc-s1 (>= 3.5), libstdc++6 (>= 5.2)
Section: libs
Priority: optional
Multi-Arch: same
Homepage: https://github.com/ncbi/ngs
Description: Next Generation Sequencing language Bindings
NGS is a new, domain-specific API for accessing reads, alignments and
pileups produced from Next Generation Sequencing. The API itself is
independent from any particular back-end implementation, and supports
use of multiple back-ends simultaneously. It also provides a library for
building new back-end "engines". The engine for accessing SRA data is
contained within the sister repository ncbi-vdb.
.
The API is currently expressed in C++, Java and Python languages. The
design makes it possible to maintain a high degree of similarity between
the code in one language and code in another - especially between C++
and Java.
drwxr-xr-x root/root 0 2021-01-17 17:52 ./
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/lib/
drwxr-xr-x root/root 0 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-sdk.so.2 -> libngs-sdk.so.2.10.9
-rw-r--r-- root/root 223340 2021-01-17 17:52 ./usr/lib/arm-linux-gnueabihf/libngs-sdk.so.2.10.9
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python3-ngs_2.10.9-1_armhf.deb
------------------------------
new Debian package, version 2.0.
size 19916 bytes: control archive=1972 bytes.
1038 bytes, 24 lines control
2298 bytes, 28 lines md5sums
247 bytes, 12 lines * postinst #!/bin/sh
396 bytes, 12 lines * prerm #!/bin/sh
Package: python3-ngs
Source: ngs-sdk
Version: 2.10.9-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 139
Depends: python3:any, libngs-sdk-dev (= 2.10.9-1)
Section: python
Priority: optional
Homepage: https://github.com/ncbi/ngs
Description: Next Generation Sequencing language Bindings (Python3 bindings)
NGS is a new, domain-specific API for accessing reads, alignments and
pileups produced from Next Generation Sequencing. The API itself is
independent from any particular back-end implementation, and supports
use of multiple back-ends simultaneously. It also provides a library for
building new back-end "engines". The engine for accessing SRA data is
contained within the sister repository ncbi-vdb.
.
The API is currently expressed in C++, Java and Python languages. The
design makes it possible to maintain a high degree of similarity between
the code in one language and code in another - especially between C++
and Java.
.
Python3 bindings.
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-rw-r--r-- root/root 2995 2020-12-16 17:49 ./usr/lib/python3/dist-packages/ngs/LibChecker.py
-rw-r--r-- root/root 22852 2020-12-16 17:49 ./usr/lib/python3/dist-packages/ngs/LibManager.py
-rw-r--r-- root/root 1906 2020-12-16 17:49 ./usr/lib/python3/dist-packages/ngs/Package.py
-rw-r--r-- root/root 2437 2020-12-16 17:49 ./usr/lib/python3/dist-packages/ngs/Pileup.py
-rw-r--r-- root/root 5949 2020-12-16 17:49 ./usr/lib/python3/dist-packages/ngs/PileupEvent.py
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-rw-r--r-- root/root 4235 2020-12-16 17:49 ./usr/lib/python3/dist-packages/ngs/Read.py
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-rw-r--r-- root/root 4653 2020-12-16 17:49 ./usr/lib/python3/dist-packages/ngs/Statistics.py
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+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 16580
Build-Time: 276
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 878
Job: ngs-sdk_2.10.9-1
Machine Architecture: armhf
Package: ngs-sdk
Package-Time: 1206
Source-Version: 2.10.9-1
Space: 16580
Status: successful
Version: 2.10.9-1
--------------------------------------------------------------------------------
Finished at 2021-01-23T06:23:47Z
Build needed 00:20:06, 16580k disc space