nco →
4.6.7-2+b1 →
armhf → 2017-08-17 19:44:32
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| nco 4.6.7-2+b1 (armhf) Thu, 17 Aug 2017 19:32:13 +0000 |
+==============================================================================+
Package: nco
Version: 4.6.7-2+b1
Source Version: 4.6.7-2
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-20be0920-c754-47c2-984a-a29cb27c5d6d' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.1 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.0 MB]
Fetched 22.1 MB in 8s (2685 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'nco' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/pkg-grass/nco.git
Please use:
git clone https://anonscm.debian.org/git/pkg-grass/nco.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 4799 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main nco 4.6.7-2 (dsc) [2094 B]
Get:2 http://172.17.0.1/private buster-staging/main nco 4.6.7-2 (tar) [4785 kB]
Get:3 http://172.17.0.1/private buster-staging/main nco 4.6.7-2 (diff) [12.3 kB]
Fetched 4799 kB in 0s (6264 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/nco-QSM01H/nco-4.6.7' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/nco-QSM01H' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-tS6gp4/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-tS6gp4/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-tS6gp4/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-tS6gp4/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-tS6gp4/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-tS6gp4/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-tS6gp4/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-tS6gp4/apt_archive ./ Packages [432 B]
Fetched 2108 B in 0s (6199 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 35 not upgraded.
Need to get 776 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-tS6gp4/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [776 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 776 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 14837 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 9), dh-autoreconf, gcc-6, g++-6, autotools-dev, bison, flex, antlr, libantlr-dev, gsl-bin, libgsl-dev, netcdf-bin, libnetcdf-dev, libudunits2-dev, libdap-dev, texinfo
Filtered Build-Depends: debhelper (>= 9), dh-autoreconf, gcc-6, g++-6, autotools-dev, bison, flex, antlr, libantlr-dev, gsl-bin, libgsl-dev, netcdf-bin, libnetcdf-dev, libudunits2-dev, libdap-dev, texinfo
dpkg-deb: building package 'sbuild-build-depends-nco-dummy' in '/<<BUILDDIR>>/resolver-tS6gp4/apt_archive/sbuild-build-depends-nco-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-nco-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-tS6gp4/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-tS6gp4/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-tS6gp4/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-tS6gp4/apt_archive ./ Sources [565 B]
Get:5 copy:/<<BUILDDIR>>/resolver-tS6gp4/apt_archive ./ Packages [649 B]
Fetched 2547 B in 0s (7245 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install nco build dependencies (apt-based resolver)
---------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
antlr autoconf automake autopoint autotools-dev bison bsdmainutils
ca-certificates-java debhelper default-jre-headless dh-autoreconf
dh-strip-nondeterminism file flex fontconfig-config fonts-dejavu-core
gettext gettext-base groff-base gsl-bin hdf5-helpers icu-devtools
intltool-debian java-common libaec-dev libaec0 libantlr-dev libantlr-java
libarchive-zip-perl libavahi-client3 libavahi-common-data libavahi-common3
libbison-dev libbsd0 libcroco3 libcups2 libcurl3-gnutls libcurl4-gnutls-dev
libdap-dev libdap25 libdapclient6v5 libdapserver7v5 libexpat1
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran3
libglib2.0-0 libgsl-dev libgsl23 libgslcblas0 libgssapi-krb5-2 libhdf5-100
libhdf5-cpp-100 libhdf5-dev libicu-dev libicu57 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
liblcms2-2 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libnetcdf-dev
libnetcdf11 libnghttp2-14 libnspr4 libnss3 libpcsclite1 libpipeline1 libpsl5
librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh2-1 libsz2
libtext-unidecode-perl libtimedate-perl libtool libudunits2-0
libudunits2-dev libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6
libxi6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl
libxml-sax-perl libxml2 libxml2-dev libxrender1 libxtst6 m4 man-db
netcdf-bin openjdk-8-jre-headless pkg-config po-debconf tex-common texinfo
ucf uuid-dev x11-common zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist
whois vacation dh-make default-jre gettext-doc libasprintf-dev
libgettextpo-dev groff cups-common libcurl4-doc libcurl3-dbg libgnutls28-dev
libidn11-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev
gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html krb5-doc krb5-user
libhdf5-doc icu-doc liblcms2-utils netcdf-doc pcscd libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc less www-browser libnss-mdns
fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho
fonts-wqy-microhei fonts-wqy-zenhei fonts-indic libmail-box-perl
texlive-base texlive-latex-base texlive-generic-recommended
texinfo-doc-nonfree texlive-fonts-recommended
Recommended packages:
libfl-dev curl | wget | lynx-cur libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs krb5-locales publicsuffix libsasl2-modules
libltdl-dev libxml-sax-expat-perl xml-core libmail-sendmail-perl
The following NEW packages will be installed:
antlr autoconf automake autopoint autotools-dev bison bsdmainutils
ca-certificates-java debhelper default-jre-headless dh-autoreconf
dh-strip-nondeterminism file flex fontconfig-config fonts-dejavu-core
gettext gettext-base groff-base gsl-bin hdf5-helpers icu-devtools
intltool-debian java-common libaec-dev libaec0 libantlr-dev libantlr-java
libarchive-zip-perl libavahi-client3 libavahi-common-data libavahi-common3
libbison-dev libbsd0 libcroco3 libcups2 libcurl3-gnutls libcurl4-gnutls-dev
libdap-dev libdap25 libdapclient6v5 libdapserver7v5 libexpat1
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran3
libglib2.0-0 libgsl-dev libgsl23 libgslcblas0 libgssapi-krb5-2 libhdf5-100
libhdf5-cpp-100 libhdf5-dev libicu-dev libicu57 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
liblcms2-2 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libnetcdf-dev
libnetcdf11 libnghttp2-14 libnspr4 libnss3 libpcsclite1 libpipeline1 libpsl5
librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh2-1 libsz2
libtext-unidecode-perl libtimedate-perl libtool libudunits2-0
libudunits2-dev libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6
libxi6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl
libxml-sax-perl libxml2 libxml2-dev libxrender1 libxtst6 m4 man-db
netcdf-bin openjdk-8-jre-headless pkg-config po-debconf
sbuild-build-depends-nco-dummy tex-common texinfo ucf uuid-dev x11-common
zlib1g-dev
0 upgraded, 116 newly installed, 0 to remove and 35 not upgraded.
Need to get 81.2 MB of archives.
After this operation, 297 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-tS6gp4/apt_archive ./ sbuild-build-depends-nco-dummy 0.invalid.0 [860 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.8.6-1 [95.7 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 9.0.12+nmu1 [178 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.4.2-1 [24.2 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.7.6.1-2 [1014 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.11-1 [29.3 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf flex armhf 2.6.1-1.3 [414 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libxau6 armhf 1:1.0.8-1 [19.9 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.12-1 [129 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.4-3 [290 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.4-3 [683 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libxext6 armhf 2:1.3.3-1 [48.1 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf java-common all 0.59 [13.6 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf default-jre-headless armhf 2:1.8-59 [10.0 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libnspr4 armhf 2:4.16-1 [95.5 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libnss3 armhf 2:3.31-1 [944 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf ca-certificates-java all 20170531+nmu1 [14.7 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libavahi-common-data armhf 0.6.32-2 [118 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libavahi-common3 armhf 0.6.32-2 [48.6 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libavahi-client3 armhf 0.6.32-2 [51.3 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf libkeyutils1 armhf 1.5.9-9 [11.9 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libkrb5support0 armhf 1.15.1-2 [58.4 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libk5crypto3 armhf 1.15.1-2 [115 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libkrb5-3 armhf 1.15.1-2 [265 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libgssapi-krb5-2 armhf 1.15.1-2 [132 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libcups2 armhf 2.2.4-3 [278 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf liblcms2-2 armhf 2.8-4 [118 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo armhf 1:1.5.1-2 [109 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf libexpat1 armhf 2.2.3-1 [67.1 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.8-0.2 [393 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0036 [70.2 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.12.3-0.2 [304 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.12.3-0.2 [349 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libpcsclite1 armhf 1.8.22-1 [54.7 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libxi6 armhf 2:1.7.9-1 [77.8 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf x11-common all 1:7.7+19 [251 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libxtst6 armhf 2:1.2.3-1 [26.3 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf openjdk-8-jre-headless armhf 8u141-b15-3 [25.4 MB]
Get:44 http://172.17.0.1/private buster-staging/main armhf tex-common all 6.07 [566 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.31-1 [223 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.31-1 [105 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.31-1 [63.5 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-2+b1 [117 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libsasl2-modules-db armhf 2.1.27~101-g0780600+dfsg-3 [66.9 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libsasl2-2 armhf 2.1.27~101-g0780600+dfsg-3 [98.1 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libldap-common all 2.4.45+dfsg-1 [87.0 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libldap-2.4-2 armhf 2.4.45+dfsg-1 [197 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libicu57 armhf 57.1-6 [7427 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-3 [601 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libantlr-java all 2.7.7+dfsg-7 [433 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf antlr all 2.7.7+dfsg-7 [13.1 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20161112.1 [73.4 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-2 [736 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-2 [433 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libbison-dev armhf 2:3.0.4.dfsg-1 [433 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf bison armhf 2:3.0.4.dfsg-1 [744 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 14 [15.9 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.59-1 [95.5 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.038-1 [17.6 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.038-1 [11.1 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.53.4-3 [2628 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-1 [132 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-2+b1 [1220 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf debhelper all 10.7.2 [975 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libgslcblas0 armhf 2.4+dfsg-6 [75.1 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libgsl23 armhf 2.4+dfsg-6 [681 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf gsl-bin armhf 2.4+dfsg-6 [28.9 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf hdf5-helpers armhf 1.10.0-patch1+docs-3 [35.9 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf icu-devtools armhf 57.1-6 [156 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libaec0 armhf 0.3.2-2 [19.3 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libantlr-dev armhf 2.7.7+dfsg-7 [177 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.24.0-1 [70.4 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.18.0-2 [42.3 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-1 [54.2 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-1 [126 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libcurl3-gnutls armhf 7.52.1-5 [259 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libcurl4-gnutls-dev armhf 7.52.1-5 [325 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libdap25 armhf 3.19.0-1 [476 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf libdapserver7v5 armhf 3.19.0-1 [122 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf libdapclient6v5 armhf 3.19.0-1 [184 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf libicu-dev armhf 57.1-6 [15.8 MB]
Get:92 http://172.17.0.1/private buster-staging/main armhf libxml2-dev armhf 2.9.4+dfsg1-3 [668 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf uuid-dev armhf 2.29.2-2+rpi1 [83.4 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf pkg-config armhf 0.29-4 [59.2 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf libdap-dev armhf 3.19.0-1 [773 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libgfortran3 armhf 6.4.0-1+rpi1 [166 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf libgsl-dev armhf 2.4+dfsg-6 [863 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libsz2 armhf 0.3.2-2 [6080 B]
Get:99 http://172.17.0.1/private buster-staging/main armhf libhdf5-100 armhf 1.10.0-patch1+docs-3 [1203 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf libhdf5-cpp-100 armhf 1.10.0-patch1+docs-3 [118 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.8.dfsg-5 [198 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.1-2 [181 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf libjpeg-dev all 1:1.5.1-2 [56.1 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf libaec-dev armhf 0.3.2-2 [17.3 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf libhdf5-dev armhf 1.10.0-patch1+docs-3 [2093 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf libnetcdf11 armhf 1:4.4.1.1-2 [294 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libnetcdf-dev armhf 1:4.4.1.1-2 [77.3 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf libtext-unidecode-perl all 1.30-1 [103 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf libudunits2-0 armhf 2.2.25-1 [69.8 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf libudunits2-dev armhf 2.2.25-1 [358 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf libxml-namespacesupport-perl all 1.11-1 [14.8 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf libxml-sax-base-perl all 1.07-1 [23.1 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf libxml-sax-perl all 0.99+dfsg-2 [68.3 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf libxml-libxml-perl armhf 2.0128+dfsg-3 [319 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf netcdf-bin armhf 1:4.4.1.1-2 [221 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf texinfo armhf 6.4.90.dfsg.1-1+b1 [1329 kB]
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Setting up libantlr-dev (2.7.7+dfsg-7) ...
Setting up libantlr-java (2.7.7+dfsg-7) ...
Setting up libaec0:armhf (0.3.2-2) ...
Setting up libexpat1:armhf (2.2.3-1) ...
Setting up libjpeg62-turbo:armhf (1:1.5.1-2) ...
Setting up libarchive-zip-perl (1.59-1) ...
Setting up libnghttp2-14:armhf (1.24.0-1) ...
Setting up libxml-namespacesupport-perl (1.11-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up liblcms2-2:armhf (2.8-4) ...
Setting up libpcsclite1:armhf (1.8.22-1) ...
Setting up libsigsegv2:armhf (2.11-1) ...
Setting up libldap-common (2.4.45+dfsg-1) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up libpsl5:armhf (0.18.0-2) ...
Setting up libgfortran3:armhf (6.4.0-1+rpi1) ...
Setting up groff-base (1.22.3-9) ...
Setting up libglib2.0-0:armhf (2.53.4-3) ...
No schema files found: doing nothing.
Setting up libtext-unidecode-perl (1.30-1) ...
Setting up libsasl2-modules-db:armhf (2.1.27~101-g0780600+dfsg-3) ...
Setting up java-common (0.59) ...
Setting up libsasl2-2:armhf (2.1.27~101-g0780600+dfsg-3) ...
Setting up uuid-dev:armhf (2.29.2-2+rpi1) ...
Setting up gettext-base (0.19.8.1-2+b1) ...
Setting up libpipeline1:armhf (1.4.2-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-1) ...
Setting up m4 (1.4.18-1) ...
Setting up libicu57:armhf (57.1-6) ...
Setting up libbsd0:armhf (0.8.6-1) ...
Setting up libnspr4:armhf (2:4.16-1) ...
Setting up ucf (3.0036) ...
Setting up libxml2:armhf (2.9.4+dfsg1-3) ...
Setting up libfreetype6:armhf (2.8-0.2) ...
Setting up libmagic-mgc (1:5.31-1) ...
Setting up libmagic1:armhf (1:5.31-1) ...
Setting up libcroco3:armhf (0.6.12-1) ...
Setting up libxml-sax-base-perl (1.07-1) ...
Setting up pkg-config (0.29-4) ...
Setting up libssh2-1:armhf (1.8.0-1) ...
Processing triggers for libc-bin (2.24-12) ...
Setting up autotools-dev (20161112.1) ...
Setting up libldap-2.4-2:armhf (2.4.45+dfsg-1) ...
Processing triggers for systemd (233-10) ...
Setting up libbison-dev:armhf (2:3.0.4.dfsg-1) ...
Setting up icu-devtools (57.1-6) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.1-2) ...
Setting up bison (2:3.0.4.dfsg-1) ...
update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libkeyutils1:armhf (1.5.9-9) ...
Setting up bsdmainutils (9.0.12+nmu1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libgslcblas0:armhf (2.4+dfsg-6) ...
Processing triggers for ca-certificates (20161130+nmu1) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Setting up hdf5-helpers (1.10.0-patch1+docs-3) ...
Setting up libx11-data (2:1.6.4-3) ...
Setting up libxau6:armhf (1:1.0.8-1) ...
Setting up autopoint (0.19.8.1-2) ...
Setting up libavahi-common-data:armhf (0.6.32-2) ...
Setting up libsz2:armhf (0.3.2-2) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-5) ...
Setting up libudunits2-0:armhf (2.2.25-1) ...
Setting up libfile-stripnondeterminism-perl (0.038-1) ...
Setting up libxml-sax-perl (0.99+dfsg-2) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up libdap25:armhf (3.19.0-1) ...
Setting up fontconfig-config (2.12.3-0.2) ...
Setting up tex-common (6.07) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up libhdf5-100:armhf (1.10.0-patch1+docs-3) ...
Setting up libgsl23:armhf (2.4+dfsg-6) ...
Setting up gettext (0.19.8.1-2+b1) ...
Setting up flex (2.6.1-1.3) ...
Setting up libgsl-dev (2.4+dfsg-6) ...
Setting up libaec-dev:armhf (0.3.2-2) ...
Setting up libnss3:armhf (2:3.31-1) ...
Setting up autoconf (2.69-10) ...
Setting up libicu-dev (57.1-6) ...
Setting up file (1:5.31-1) ...
Setting up libkrb5support0:armhf (1.15.1-2) ...
Setting up libxml2-dev:armhf (2.9.4+dfsg1-3) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up libjpeg-dev (1:1.5.1-2) ...
Setting up libdapserver7v5:armhf (3.19.0-1) ...
Setting up automake (1:1.15.1-2) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up libudunits2-dev (2.2.25-1) ...
Setting up man-db (2.7.6.1-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libavahi-common3:armhf (0.6.32-2) ...
Setting up libxml-libxml-perl (2.0128+dfsg-3) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up libxcb1:armhf (1.12-1) ...
Setting up gsl-bin (2.4+dfsg-6) ...
Setting up libtool (2.4.6-2) ...
Setting up libfontconfig1:armhf (2.12.3-0.2) ...
Setting up libk5crypto3:armhf (1.15.1-2) ...
Setting up libhdf5-cpp-100:armhf (1.10.0-patch1+docs-3) ...
Setting up po-debconf (1.0.20) ...
Setting up libx11-6:armhf (2:1.6.4-3) ...
Setting up libhdf5-dev (1.10.0-patch1+docs-3) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libavahi-client3:armhf (0.6.32-2) ...
Setting up libkrb5-3:armhf (1.15.1-2) ...
Setting up texinfo (6.4.90.dfsg.1-1+b1) ...
Setting up libxext6:armhf (2:1.3.3-1) ...
Setting up libgssapi-krb5-2:armhf (1.15.1-2) ...
Setting up libcups2:armhf (2.2.4-3) ...
Setting up libxi6:armhf (2:1.7.9-1) ...
Setting up libcurl3-gnutls:armhf (7.52.1-5) ...
Setting up libxtst6:armhf (2:1.2.3-1) ...
Setting up libdapclient6v5:armhf (3.19.0-1) ...
Setting up libcurl4-gnutls-dev:armhf (7.52.1-5) ...
Setting up libnetcdf11 (1:4.4.1.1-2) ...
Setting up libdap-dev:armhf (3.19.0-1) ...
Setting up libnetcdf-dev (1:4.4.1.1-2) ...
Setting up netcdf-bin (1:4.4.1.1-2) ...
Setting up ca-certificates-java (20170531+nmu1) ...
Adding debian:ACCVRAIZ1.pem
Adding debian:ACEDICOM_Root.pem
Adding debian:AC_Raíz_Certicámara_S.A..pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AddTrust_External_Root.pem
Adding debian:AddTrust_Low-Value_Services_Root.pem
Adding debian:AddTrust_Public_Services_Root.pem
Adding debian:AddTrust_Qualified_Certificates_Root.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:ApplicationCA_-_Japanese_Government.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_CA_1.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig_Root_R1.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:CNNIC_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Camerfirma_Chambers_of_Commerce_Root.pem
Adding debian:Camerfirma_Global_Chambersign_Root.pem
Adding debian:Certigna.pem
Adding debian:Certinomis_-_Autorité_Racine.pem
Adding debian:Certinomis_-_Root_CA.pem
Adding debian:Certplus_Class_2_Primary_CA.pem
Adding debian:Certplus_Root_CA_G1.pem
Adding debian:Certplus_Root_CA_G2.pem
Adding debian:Certum_Root_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Chambers_of_Commerce_Root_-_2008.pem
Adding debian:China_Internet_Network_Information_Center_EV_Certificates_Root.pem
Adding debian:ComSign_CA.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:Comodo_Secure_Services_root.pem
Adding debian:Comodo_Trusted_Services_root.pem
Adding debian:Cybertrust_Global_Root.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DST_ACES_CA_X6.pem
Adding debian:DST_Root_CA_X3.pem
Adding debian:Deutsche_Telekom_Root_CA_2.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:E-Tugra_Certification_Authority.pem
Adding debian:EBG_Elektronik_Sertifika_Hizmet_Sağlayıcısı.pem
Adding debian:EC-ACC.pem
Adding debian:EE_Certification_Centre_Root_CA.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:Equifax_Secure_CA.pem
Adding debian:Equifax_Secure_Global_eBusiness_CA.pem
Adding debian:Equifax_Secure_eBusiness_CA_1.pem
Adding debian:GeoTrust_Global_CA.pem
Adding debian:GeoTrust_Global_CA_2.pem
Adding debian:GeoTrust_Primary_Certification_Authority.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem
Adding debian:GeoTrust_Universal_CA.pem
Adding debian:GeoTrust_Universal_CA_2.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R2.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:Global_Chambersign_Root_-_2008.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:Hongkong_Post_Root_CA_1.pem
Adding debian:IGC_A.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:Juur-SK.pem
Adding debian:Microsec_e-Szigno_Root_CA.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:Network_Solutions_Certificate_Authority.pem
Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:OpenTrust_Root_CA_G1.pem
Adding debian:OpenTrust_Root_CA_G2.pem
Adding debian:OpenTrust_Root_CA_G3.pem
Adding debian:PSCProcert.pem
Adding debian:QuoVadis_Root_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:RSA_Security_2048_v3.pem
Adding debian:Root_CA_Generalitat_Valenciana.pem
Adding debian:S-TRUST_Authentication_and_Encryption_Root_CA_2005_PN.pem
Adding debian:S-TRUST_Universal_Root_CA.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_EV_RootCA1.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Sonera_Class_2_Root_CA.pem
Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Platinum_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:Swisscom_Root_CA_1.pem
Adding debian:Swisscom_Root_CA_2.pem
Adding debian:Swisscom_Root_EV_CA_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TC_TrustCenter_Class_3_CA_II.pem
Adding debian:TURKTRUST_Certificate_Services_Provider_Root_2007.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:Taiwan_GRCA.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:Trustis_FPS_Root_CA.pem
Adding debian:TÜBİTAK_UEKAE_Kök_Sertifika_Hizmet_Sağlayıcısı_-_Sürüm_3.pem
Adding debian:TÜRKTRUST_Elektronik_Sertifika_Hizmet_Sağlayıcısı_H5.pem
Adding debian:TÜRKTRUST_Elektronik_Sertifika_Hizmet_Sağlayıcısı_H6.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:UTN_USERFirst_Email_Root_CA.pem
Adding debian:UTN_USERFirst_Hardware_Root_CA.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem
Adding debian:VeriSign_Universal_Root_Certification_Authority.pem
Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority.pem
Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G2.pem
Adding debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Visa_eCommerce_Root.pem
Adding debian:WellsSecure_Public_Root_Certificate_Authority.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:thawte_Primary_Root_CA.pem
Adding debian:thawte_Primary_Root_CA_-_G2.pem
Adding debian:thawte_Primary_Root_CA_-_G3.pem
done.
Setting up dh-strip-nondeterminism (0.038-1) ...
Setting up debhelper (10.7.2) ...
Setting up dh-autoreconf (14) ...
Processing triggers for ca-certificates (20161130+nmu1) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
done.
Setting up openjdk-8-jre-headless:armhf (8u141-b15-3) ...
update-alternatives: using /usr/lib/jvm/java-8-openjdk-armhf/jre/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode
update-alternatives: using /usr/lib/jvm/java-8-openjdk-armhf/jre/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-8-openjdk-armhf/jre/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-8-openjdk-armhf/jre/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode
update-alternatives: using /usr/lib/jvm/java-8-openjdk-armhf/jre/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-8-openjdk-armhf/jre/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-8-openjdk-armhf/jre/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-8-openjdk-armhf/jre/bin/orbd to provide /usr/bin/orbd (orbd) in auto mode
update-alternatives: using /usr/lib/jvm/java-8-openjdk-armhf/jre/bin/servertool to provide /usr/bin/servertool (servertool) in auto mode
update-alternatives: using /usr/lib/jvm/java-8-openjdk-armhf/jre/bin/tnameserv to provide /usr/bin/tnameserv (tnameserv) in auto mode
update-alternatives: using /usr/lib/jvm/java-8-openjdk-armhf/jre/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up antlr (2.7.7+dfsg-7) ...
Setting up default-jre-headless (2:1.8-59) ...
Setting up sbuild-build-depends-nco-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.24-12) ...
Processing triggers for systemd (233-10) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.4.0-79-generic armhf (armv8l)
Toolchain package versions: binutils_2.28-6 dpkg-dev_1.18.24 g++-6_6.4.0-1+rpi1 gcc-6_6.4.0-1+rpi1 libc6-dev_2.24-12 libstdc++-6-dev_6.4.0-1+rpi1 libstdc++6_7.1.0-9+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.115 antlr_2.7.7+dfsg-7 apt_1.5~beta1+b3 autoconf_2.69-10 automake_1:1.15.1-2 autopoint_0.19.8.1-2 autotools-dev_20161112.1 base-files_10+rpi1 base-passwd_3.5.43 bash_4.4-5 binutils_2.28-6 bison_2:3.0.4.dfsg-1 bsdmainutils_9.0.12+nmu1 bsdutils_1:2.29.2-2+rpi1 build-essential_12.3 bzip2_1.0.6-8.1 ca-certificates_20161130+nmu1 ca-certificates-java_20170531+nmu1 coreutils_8.26-3 cpio_2.11+dfsg-6 cpp_4:6.3.0-4d1 cpp-6_6.4.0-1+rpi1 dash_0.5.8-2.5 debconf_1.5.63 debhelper_10.7.2 debianutils_4.8.1.1 default-jre-headless_2:1.8-59 dh-autoreconf_14 dh-strip-nondeterminism_0.038-1 diffutils_1:3.5-3 dmsetup_2:1.02.137-2 dpkg_1.18.24 dpkg-dev_1.18.24 e2fslibs_1.43.4-2 e2fsprogs_1.43.4-2 fakeroot_1.21-3.1 file_1:5.31-1 findutils_4.6.0+git+20170606-3 flex_2.6.1-1.3 fontconfig-config_2.12.3-0.2 fonts-dejavu-core_2.37-1 g++_4:6.3.0-4d1 g++-6_6.4.0-1+rpi1 gcc_4:6.3.0-4d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5-base_5.4.1-4 gcc-6_6.4.0-1+rpi1 gcc-6-base_6.4.0-1+rpi1 gcc-7-base_7.1.0-9+rpi1 gettext_0.19.8.1-2+b1 gettext-base_0.19.8.1-2+b1 gnupg_2.1.18-8 gnupg-agent_2.1.18-8 gpgv_2.1.18-8 grep_3.1-2 groff-base_1.22.3-9 gsl-bin_2.4+dfsg-6 gzip_1.6-5 hdf5-helpers_1.10.0-patch1+docs-3 hostname_3.18 icu-devtools_57.1-6 init-system-helpers_1.49 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 java-common_0.59 klibc-utils_2.0.4-9+rpi1 kmod_24-1 libacl1_2.2.52-3 libaec-dev_0.3.2-2 libaec0_0.3.2-2 libantlr-dev_2.7.7+dfsg-7 libantlr-java_2.7.7+dfsg-7 libapparmor1_2.11.0-6 libapt-pkg5.0_1.5~beta1+b3 libarchive-zip-perl_1.59-1 libasan3_6.4.0-1+rpi1 libassuan0_2.4.3-2 libatomic1_7.1.0-9+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.7.7-1 libaudit1_1:2.7.7-1 libavahi-client3_0.6.32-2 libavahi-common-data_0.6.32-2 libavahi-common3_0.6.32-2 libbison-dev_2:3.0.4.dfsg-1 libblkid1_2.29.2-2+rpi1 libbsd0_0.8.6-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.24-12 libc-dev-bin_2.24-12 libc6_2.24-12 libc6-dev_2.24-12 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcc1-0_7.1.0-9+rpi1 libcomerr2_1.43.4-2 libcroco3_0.6.12-1 libcryptsetup4_2:1.7.3-4 libcups2_2.2.4-3 libcurl3-gnutls_7.52.1-5 libcurl4-gnutls-dev_7.52.1-5 libdap-dev_3.19.0-1 libdap25_3.19.0-1 libdapclient6v5_3.19.0-1 libdapserver7v5_3.19.0-1 libdb5.3_5.3.28-12 libdbus-1-3_1.10.20-1 libdebconfclient0_0.229 libdevmapper1.02.1_2:1.02.137-2 libdpkg-perl_1.18.24 libdrm2_2.4.81-2+rpi1 libexpat1_2.2.3-1 libfakeroot_1.21-3.1 libfdisk1_2.29.2-2+rpi1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.038-1 libfontconfig1_2.12.3-0.2 libfreetype6_2.8-0.2 libgcc-6-dev_6.4.0-1+rpi1 libgcc1_1:7.1.0-9+rpi1 libgcrypt20_1.7.8-2 libgdbm3_1.8.3-14 libgfortran3_6.4.0-1+rpi1 libglib2.0-0_2.53.4-3 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.14-2 libgomp1_7.1.0-9+rpi1 libgpg-error0_1.27-3 libgsl-dev_2.4+dfsg-6 libgsl23_2.4+dfsg-6 libgslcblas0_2.4+dfsg-6 libgssapi-krb5-2_1.15.1-2 libhdf5-100_1.10.0-patch1+docs-3 libhdf5-cpp-100_1.10.0-patch1+docs-3 libhdf5-dev_1.10.0-patch1+docs-3 libhogweed4_3.3-1 libicu-dev_57.1-6 libicu57_57.1-6 libidn11_1.33-1 libidn2-0_2.0.2-1 libip4tc0_1.6.1-2 libisl15_0.18-1 libjpeg-dev_1:1.5.1-2 libjpeg62-turbo_1:1.5.1-2 libjpeg62-turbo-dev_1:1.5.1-2 libk5crypto3_1.15.1-2 libkeyutils1_1.5.9-9 libklibc_2.0.4-9+rpi1 libkmod2_24-1 libkrb5-3_1.15.1-2 libkrb5support0_1.15.1-2 libksba8_1.3.5-2 liblcms2-2_2.8-4 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.31-1 libmagic1_1:5.31-1 libmount1_2.29.2-2+rpi1 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libncurses5_6.0+20170715-2 libncursesw5_6.0+20170715-2 libnetcdf-dev_1:4.4.1.1-2 libnetcdf11_1:4.4.1.1-2 libnettle6_3.3-1 libnghttp2-14_1.24.0-1 libnih-dbus1_1.0.3-8 libnih1_1.0.3-8 libnpth0_1.5-2 libnspr4_2:4.16-1 libnss3_2:3.31-1 libp11-kit0_0.23.7-3 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpcre3_2:8.39-3 libpcsclite1_1.8.22-1 libperl5.24_5.24.1-7 libperl5.26_5.26.0-4 libpipeline1_1.4.2-1 libplymouth4_0.9.2-4 libpng16-16_1.6.30-2 libprocps6_2:3.3.12-3 libpsl5_0.18.0-2 libreadline5_5.2+dfsg-3 libreadline7_7.0-3 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3 libseccomp2_2.3.1-2.1 libselinux1_2.6-3 libsemanage-common_2.6-2 libsemanage1_2.6-2 libsepol1_2.6-2 libsigsegv2_2.11-1 libsmartcols1_2.29.2-2+rpi1 libsqlite3-0_3.19.3-3 libss2_1.43.4-2 libssh2-1_1.8.0-1 libssl1.1_1.1.0f-3 libstdc++-6-dev_6.4.0-1+rpi1 libstdc++6_7.1.0-9+rpi1 libsystemd0_233-10 libsz2_0.3.2-2 libtasn1-6_4.12-2 libtext-unidecode-perl_1.30-1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20170715-2 libtool_2.4.6-2 libubsan0_7.1.0-9+rpi1 libudev1_233-10 libudunits2-0_2.2.25-1 libudunits2-dev_2.2.25-1 libunistring2_0.9.7-2 libustr-1.0-1_1.0.4-6 libuuid1_2.29.2-2+rpi1 libx11-6_2:1.6.4-3 libx11-data_2:1.6.4-3 libxau6_1:1.0.8-1 libxcb1_1.12-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1 libxi6_2:1.7.9-1 libxml-libxml-perl_2.0128+dfsg-3 libxml-namespacesupport-perl_1.11-1 libxml-sax-base-perl_1.07-1 libxml-sax-perl_0.99+dfsg-2 libxml2_2.9.4+dfsg1-3 libxml2-dev_2.9.4+dfsg1-3 libxrender1_1:0.9.10-1 libxtst6_2:1.2.3-1 linux-base_4.5 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.4-4.1 lsb-base_9.20161125+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.7.6.1-2 mawk_1.3.3-17 mount_2.29.2-2+rpi1 mountall_2.54 multiarch-support_2.24-12 ncurses-base_6.0+20170715-2 ncurses-bin_6.0+20170715-2 netcdf-bin_1:4.4.1.1-2 openjdk-8-jre-headless_8u141-b15-3 openssl_1.1.0f-3 passwd_1:4.4-4.1 patch_2.7.5-1 perl_5.26.0-4 perl-base_5.26.0-4 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.0-4 pinentry-curses_1.0.0-2 pkg-config_0.29-4 plymouth_0.9.2-4 po-debconf_1.0.20 procps_2:3.3.12-3 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-nco-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.9+nmu1 systemd_233-10 sysvinit-utils_2.88dsf-59.9 tar_1.29b-2 tex-common_6.07 texinfo_6.4.90.dfsg.1-1+b1 tzdata_2017b-2 ucf_3.0036 udev_233-10 util-linux_2.29.2-2+rpi1 uuid-dev_2.29.2-2+rpi1 x11-common_1:7.7+19 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5 zlib1g-dev_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Sat Aug 5 11:45:18 2017 UTC
gpgv: using RSA key 8182DE417056408D614650D16750F10AE88D4AF1
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./nco_4.6.7-2.dsc
dpkg-source: info: extracting nco in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking nco_4.6.7.orig.tar.gz
dpkg-source: info: unpacking nco_4.6.7-2.debian.tar.xz
Check disk space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 4.6.7-2+b1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-20be0920-c754-47c2-984a-a29cb27c5d6d
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package nco
dpkg-buildpackage: info: source version 4.6.7-2+b1
dpkg-buildpackage: info: source distribution buster-staging
dpkg-source --before-build nco-4.6.7
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --with autoreconf \
--buildsystem autoconf \
--parallel
dh_testdir -O--buildsystem=autoconf -O--parallel
dh_auto_clean -O--buildsystem=autoconf -O--parallel
dh_autoreconf_clean -O--buildsystem=autoconf -O--parallel
debian/rules override_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_clean data/big.nc \
data/in_1.nc \
data/in_2.nc \
data/nco_bm.stderr \
debian/rules.old \
doc/nco.info \
doc/nco.info-1 \
doc/nco.info-2 \
doc/nco.info-3
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules build-arch
dh build-arch --with autoreconf \
--buildsystem autoconf \
--parallel
dh_testdir -a -O--buildsystem=autoconf -O--parallel
dh_update_autotools_config -a -O--buildsystem=autoconf -O--parallel
dh_autoreconf -a -O--buildsystem=autoconf -O--parallel
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'autobld'.
libtoolize: copying file 'autobld/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:170: installing 'autobld/compile'
configure.ac:156: installing 'autobld/missing'
src/nco++/Makefile.am: installing 'autobld/depcomp'
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- \
--libdir=/usr/lib/nco \
--disable-nco_cplusplus \
--disable-static \
--disable-udunits \
--enable-dap \
--enable-gsl \
--enable-ncap2 \
--enable-netcdf4 \
--enable-udunits2
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --disable-maintainer-mode --disable-dependency-tracking --libdir=/usr/lib/nco --disable-nco_cplusplus --disable-static --disable-udunits --enable-dap --enable-gsl --enable-ncap2 --enable-netcdf4 --enable-udunits2
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking target system type... arm-unknown-linux-gnueabihf
./configure: line 3028: git: command not found
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc-6
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc-6 accepts -g... yes
checking for gcc-6 option to accept ISO C89... none needed
checking whether gcc-6 understands -c and -o together... yes
checking for style of include used by make... GNU
checking dependency style of gcc-6... none
checking whether we are using the GNU C++ compiler... yes
checking whether g++-6 accepts -g... yes
checking dependency style of g++-6... none
checking how to run the C preprocessor... gcc-6 -E
checking how to run the C++ preprocessor... g++-6 -E
checking for gcc-6 option to accept ISO C99... none needed
checking for gcc-6 option to accept ISO Standard C... (cached) none needed
checking for flex... flex
checking lex output file root... lex.yy
checking lex library... none needed
checking whether yytext is a pointer... no
checking for bison... bison -y
checking whether ln -s works... yes
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for fgrep... /bin/grep -F
checking for ld used by gcc-6... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc-6 object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc-6 supports -fno-rtti -fno-exceptions... no
checking for gcc-6 option to produce PIC... -fPIC -DPIC
checking if gcc-6 PIC flag -fPIC -DPIC works... yes
checking if gcc-6 static flag -static works... yes
checking if gcc-6 supports -c -o file.o... yes
checking if gcc-6 supports -c -o file.o... (cached) yes
checking whether the gcc-6 linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... g++-6 -E
checking for ld used by g++-6... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++-6 linker (/usr/bin/ld) supports shared libraries... yes
checking for g++-6 option to produce PIC... -fPIC -DPIC
checking if g++-6 PIC flag -fPIC -DPIC works... yes
checking if g++-6 static flag -static works... yes
checking if g++-6 supports -c -o file.o... yes
checking if g++-6 supports -c -o file.o... (cached) yes
checking whether the g++-6 linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether to enable maintainer-specific portions of Makefiles... no
checking for working memcmp... yes
checking whether lstat correctly handles trailing slash... yes
checking whether stat accepts an empty string... no
checking for working strtod... yes
checking for canonicalize_file_name... yes
checking for floor... no
checking for gethostname... yes
checking for getpagesize... yes
checking for getrusage... yes
checking for memchr... yes
checking for memmove... yes
checking for memset... yes
checking for mkstemp... yes
checking for pow... no
checking for readlink... yes
checking for realpath... yes
checking for regcomp... yes
checking for setlocale... yes
checking for sqrt... no
checking for strchr... yes
checking for strerror... yes
checking for strpbrk... yes
checking for strrchr... yes
checking for strstr... yes
checking for strtol... yes
checking for ANSI C header files... (cached) yes
checking getopt.h usability... yes
checking getopt.h presence... yes
checking for getopt.h... yes
checking libintl.h usability... yes
checking libintl.h presence... yes
checking for libintl.h... yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for strings.h... (cached) yes
checking for unistd.h... (cached) yes
checking cstdlib usability... yes
checking cstdlib presence... yes
checking for cstdlib... yes
checking for an ANSI C-conforming const... yes
checking for inline... inline
checking for pid_t... yes
checking for size_t... yes
checking whether struct tm is in sys/time.h or time.h... time.h
checking for uid_t in sys/types.h... yes
checking for ptrdiff_t... yes
checking size of int*... 4
checking whether C++ compiler implements namespaces... yes
checking whether C++ compiler has working valarray<T>... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... 64
#################################
# Test for netCDF #
################################
checking for /opt/local/include/netcdf.h... no
checking for /opt/local/lib/libnetcdf.a... no
checking netcdf.h usability... yes
checking netcdf.h presence... yes
checking for netcdf.h... yes
checking for nc_open in -lnetcdf... yes
#################################
# Test for netCDF4 support #
#################################
checking whether NC_CHUNKED is declared... yes
configure: netcdf.h contains netCDF4 definitions
checking for nc_def_var_chunking in -lnetcdf... yes
configure: Good news: Simple program compiles and links to netCDF4 library
checking for gcc-6 option to support OpenMP... -fopenmp
configure: OpenMP support enabled
Beginning generic tests for DAP support
Testing for DAP-netCDF support (is DAP in libnetcdf.a?)...
checking for daperror in -lnetcdf... yes
configure: DAP support enabled
checking for getopt_long... yes
checking for _g95_ac_array in -lf95... no
checking for sin in -lm... yes
checking for sinf in -lsunmath... no
checking for gettext in -lintl... no
checking for res_init in -lresolv... no
checking for main in -lsocket... no
checking for main in -lthread... no
checking for nco_open in -lnco... no
checking for nc_inq_format... yes
checking for getopt... yes
checking for getopt_long... (cached) yes
checking for atan2... yes
checking for acosf... yes
checking for asinf... yes
checking for atanf... yes
checking for atan2f... yes
checking for cosf... yes
checking for expf... yes
checking for fabsf... yes
checking for fmodf... yes
checking for log10f... yes
checking for logf... yes
checking for powf... yes
checking for sinf... yes
checking for sqrtf... yes
checking for tanf... yes
checking for erff... yes
checking for erfcf... yes
checking for gammaf... yes
checking for acoshf... yes
checking for asinhf... yes
checking for atanhf... yes
checking for coshf... yes
checking for sinhf... yes
checking for tanhf... yes
checking for ceilf... yes
checking for floorf... yes
checking for nearbyint... yes
checking for rint... yes
checking for round... yes
checking for trunc... yes
checking for nearbyintf... yes
checking for rintf... yes
checking for roundf... yes
checking for truncf... yes
checking for getopt_long... (cached) yes
checking for strdup... yes
checking for strcasecmp... yes
checking for strsep... yes
checking for strcasestr... yes
##########################################################
# Sorting out MacOSX build parameters #
##########################################################
#################################
# Testing for ANTLR support #
#################################
checking for runantlr... runantlr
configure: antlr library was found
##################################################
# Testing for ESMF support (only for developers) #
##################################################
########################################
# Testing for GSL support #
########################################
configure: These GSL library and header tests must succeed for GSL support:
checking for gsl_sf_gamma_inc in -lgsl... yes
checking for /usr/include/gsl/gsl_sf_gamma.h... yes
configure: GSL support enabled
checking regex.h usability... yes
checking regex.h presence... yes
checking for regex.h... yes
checking for sys/types.h... (cached) yes
checking for regexec... yes
checking for regcomp... (cached) yes
checking for regfree... yes
########################################
# Testing for UDUNITS support #
########################################
checking for XML_ParserCreate in -lexpat... no
checking for /usr/include/udunits2/udunits2.h... no
checking for /usr/include/udunits2.h... yes
checking for /usr/lib/x86_64-linux-gnu/libudunits2.a... no
checking for /usr/lib/i386-linux-gnu/libudunits2.a... no
checking for /opt/local/include/udunits2/udunits2.h... no
checking for /opt/local/lib/libudunits2.a... no
checking for ... no
configure: WARNING: file was not found but will still attempt to build NCO with UDUnits2 support.
configure: NB: Following tests of UDUnits2 library and header must succeed for UDUnits2 support:
checking for ut_read_xml in -ludunits2... yes
checking udunits2.h usability... yes
checking udunits2.h presence... yes
checking for udunits2.h... yes
configure: UDUnits2 support enabled
checking for ncgen... /usr/bin/ncgen
configure: Creating sample netCDF data files for self-tests
###############################
# Require Shared Libs? #
###############################
checking for makeinfo... yes
MAKEINFO_VERSION=6.4.90
configure: Documentation support enabled
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating data/Makefile
config.status: creating src/Makefile
config.status: creating src/nco/Makefile
config.status: creating man/Makefile
config.status: creating src/nco++/Makefile
config.status: creating doc/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
Configuration Parameters:
AR_FLAGS............. cru
CC................... gcc-6
CFLAGS............... -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE
CPP.................. gcc-6 -E
CPPFLAGS............. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include
CXX.................. g++-6
CXXFLAGS............. -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security
ENABLE_DAP........... yes
ENABLE_ESMF...........no
ENABLE_GSL........... yes
ENABLE_NETCDF4....... yes
ENABLE_OPENMP........ yes
ENABLE_UDUNITS....... no
ENABLE_UDUNITS2...... yes
GSL_ROOT............. /usr
HAVE_ANTLR........... runantlr
HAVE_MAKEINFO........ yes
HAVE_NETCDF4_H....... yes
HOST.................
HOSTNAME............. mb-lxc-01
LDFLAGS.............. -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-z,relro -Wl,-z,now
LIBS................. -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -ludunits2
NETCDF_ROOT.......... /usr
OPENMP_CFLAGS........ -fopenmp
host................. arm-unknown-linux-gnueabihf
install prefix ...... /usr
*******************************************************************
Configuration complete. You are now ready to run 'make'.
Ensure 'make' points to GNU Make (AT&T Make chokes on GNU syntax).
If the build fails, please examine the file 'configure.eg'
in the top-level NCO directory. It contains examples known to
build NCO for various platforms and compilers.
*******************************************************************
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build
make -j4
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make all-recursive
make[3]: Entering directory '/<<PKGBUILDDIR>>'
Making all in data
make[4]: Entering directory '/<<PKGBUILDDIR>>/data'
/usr/bin/ncgen -o big.nc big.cdl
/usr/bin/ncgen -o in_rec_zero.nc in_rec_zero.cdl
ncks -O -7 --cnk_dmn time,10 in.nc in_4c.nc
/usr/bin/ncgen -k netCDF-4 -o in_grp_8.nc in_grp_8.cdl
/bin/bash: ncks: command not found
Makefile:564: recipe for target 'in_4c.nc' failed
make[4]: [in_4c.nc] Error 127 (ignored)
/usr/bin/ncgen -k netCDF-4 -o hdn.nc hdn.cdl
/usr/bin/ncgen -k netCDF-4 -o mrd.nc mrd.cdl
/usr/bin/ncgen -k netCDF-4 -o split.nc split.cdl
make[4]: Leaving directory '/<<PKGBUILDDIR>>/data'
Making all in src
make[4]: Entering directory '/<<PKGBUILDDIR>>/src'
Making all in nco
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/nco'
test -f ncap_yacc.c || /bin/bash ../../autobld/ylwrap ncap_yacc.y y.tab.c ncap_yacc.c y.tab.h `echo ncap_yacc.c | sed -e s/cc$/hh/ -e s/cpp$/hpp/ -e s/cxx$/hxx/ -e s/c++$/h++/ -e s/c$/h/` y.output ncap_yacc.output -- bison -y -d --name-prefix=nco_yy
updating ncap_yacc.h
make all-am
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/nco'
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_att_utl.lo nco_att_utl.c
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_aux.lo nco_aux.c
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_bnr.lo nco_bnr.c
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cln_utl.lo nco_cln_utl.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_bnr.c -fPIC -DPIC -o .libs/nco_bnr.o
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_aux.c -fPIC -DPIC -o .libs/nco_aux.o
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_att_utl.c -fPIC -DPIC -o .libs/nco_att_utl.o
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cln_utl.c -fPIC -DPIC -o .libs/nco_cln_utl.o
In file included from /usr/include/math.h:26:0,
from nco_aux.h:17,
from nco_aux.c:22:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
In file included from /usr/include/stdio.h:27:0,
from nco_bnr.h:17,
from nco_bnr.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
In file included from /usr/include/math.h:26:0,
from nco_att_utl.h:21,
from nco_att_utl.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
In file included from /usr/include/ctype.h:25:0,
from nco_cln_utl.h:25,
from nco_cln_utl.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnf_dmn.lo nco_cnf_dmn.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnf_dmn.c -fPIC -DPIC -o .libs/nco_cnf_dmn.o
In file included from /usr/include/stdio.h:27:0,
from nco_cnf_dmn.h:17,
from nco_cnf_dmn.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnf_typ.lo nco_cnf_typ.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnf_typ.c -fPIC -DPIC -o .libs/nco_cnf_typ.o
In file included from /usr/include/math.h:26:0,
from nco_cnf_typ.h:17,
from nco_cnf_typ.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnk.lo nco_cnk.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnk.c -fPIC -DPIC -o .libs/nco_cnk.o
In file included from /usr/include/math.h:26:0,
from nco_cnk.h:17,
from nco_cnk.c:45:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
nco_cnk.c: In function 'nco_cnk_csh_ini':
nco_cnk.c:157:82: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t {aka unsigned int}' [-Wformat=]
(void)fprintf(stderr,"%s: INFO %s reports chunk cache size = cnk_csh_byt = %ld B, # of slots in raw data chunk cache has table = nelemsp = %ld, pre-emption favor fraction = pmp_fvr_frc = %g\n",nco_prg_nm_get(),fnc_nm,cnk_csh_byt_crr,nelemsp,pmp_fvr_frc);
^
nco_cnk.c:157:146: warning: format '%ld' expects argument of type 'long int', but argument 6 has type 'size_t {aka unsigned int}' [-Wformat=]
(void)fprintf(stderr,"%s: INFO %s reports chunk cache size = cnk_csh_byt = %ld B, # of slots in raw data chunk cache has table = nelemsp = %ld, pre-emption favor fraction = pmp_fvr_frc = %g\n",nco_prg_nm_get(),fnc_nm,cnk_csh_byt_crr,nelemsp,pmp_fvr_frc);
^
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnv_arm.lo nco_cnv_arm.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnv_arm.c -fPIC -DPIC -o .libs/nco_cnv_arm.o
In file included from /usr/include/stdio.h:27:0,
from nco_cnv_arm.h:17,
from nco_cnv_arm.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnv_csm.lo nco_cnv_csm.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnv_csm.c -fPIC -DPIC -o .libs/nco_cnv_csm.o
In file included from /usr/include/stdio.h:27:0,
from nco_cnv_csm.h:17,
from nco_cnv_csm.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_ctl.lo nco_ctl.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_ctl.c -fPIC -DPIC -o .libs/nco_ctl.o
In file included from /usr/include/stdio.h:27:0,
from nco_ctl.h:21,
from nco_ctl.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_dbg.lo nco_dbg.c
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_dmn_utl.lo nco_dmn_utl.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_dbg.c -fPIC -DPIC -o .libs/nco_dbg.o
In file included from /usr/include/stdio.h:27:0,
from nco_dbg.h:17,
from nco_dbg.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_fl_utl.lo nco_fl_utl.c
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_grp_utl.lo nco_grp_utl.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_dmn_utl.c -fPIC -DPIC -o .libs/nco_dmn_utl.o
In file included from /usr/include/stdio.h:27:0,
from nco_dmn_utl.h:21,
from nco_dmn_utl.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_fl_utl.c -fPIC -DPIC -o .libs/nco_fl_utl.o
In file included from /usr/include/errno.h:28:0,
from nco_fl_utl.h:21,
from nco_fl_utl.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_grp_utl.c -fPIC -DPIC -o .libs/nco_grp_utl.o
In file included from /usr/include/assert.h:35:0,
from nco_grp_utl.h:21,
from nco_grp_utl.c:19:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
nco_grp_utl.c: In function 'nco_cpy_var_dfn_trv':
nco_grp_utl.c:4810:97: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t {aka unsigned int}' [-Wformat=]
for(int idx_dmn=0;idx_dmn<nbr_dmn_var;idx_dmn++) (void)fprintf(stdout,"name,ID,sz = %s,%d,%ld : ",dmn_cmn[idx_dmn].nm_fll,dmn_out_id[idx_dmn],dmn_cmn[idx_dmn].sz);
^
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_grp_trv.lo nco_grp_trv.c
nco_grp_utl.c: In function 'nco_chk_nsm':
nco_grp_utl.c:9636:142: warning: format '%ld' expects argument of type 'long int', but argument 7 has type 'size_t {aka unsigned int}' [-Wformat=]
(void)fprintf(stdout,"%s: ERROR Variables do not conform: variable <%s> has dimension <%s> with size %ld, expecting size %ld\n",nco_prg_nm_get(),
^
nco_grp_utl.c:9667:83: warning: format '%ld' expects argument of type 'long int', but argument 6 has type 'size_t {aka unsigned int}' [-Wformat=]
if (fl_idx == 0) (void)fprintf(stdout,"%s: DEBUG %s <%s> elements %ld\n",nco_prg_nm_get(),fnc_nm,var_trv->nm_fll,lmn_cnt);
^
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_grp_trv.c -fPIC -DPIC -o .libs/nco_grp_trv.o
In file included from /usr/include/string.h:25:0,
from nco_grp_trv.h:21,
from nco_grp_trv.c:14:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_lmt.lo nco_lmt.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_lmt.c -fPIC -DPIC -o .libs/nco_lmt.o
In file included from /usr/include/math.h:26:0,
from nco_lmt.h:21,
from nco_lmt.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_lst_utl.lo nco_lst_utl.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_lst_utl.c -fPIC -DPIC -o .libs/nco_lst_utl.o
In file included from /usr/include/stdio.h:27:0,
from nco_lst_utl.h:21,
from nco_lst_utl.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
nco_lst_utl.c: In function 'nco_fmt_sng_printf_subst':
nco_lst_utl.c:38:23: warning: unknown escape sequence: '\.'
const char rx_sng[]="%([+-0#'I])?([0-9]*)?([\.?[0-9]*)?([h+l+Ljzt])?[bcdeEfFgGiosuxX]"; /* [sng] Regular expression pattern */
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_md5.lo nco_md5.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_md5.c -fPIC -DPIC -o .libs/nco_md5.o
In file included from /usr/include/stdio.h:27:0,
from nco_md5.h:22,
from nco_md5.c:25:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_mmr.lo nco_mmr.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_mmr.c -fPIC -DPIC -o .libs/nco_mmr.o
In file included from /usr/include/errno.h:28:0,
from nco_mmr.h:21,
from nco_mmr.c:27:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
nco_mmr.c: In function 'nco_malloc':
nco_mmr.c:103:111: warning: format '%zu' expects argument of type 'size_t', but argument 6 has type 'long unsigned int' [-Wformat=]
if(ntg_NCO_MMR_DBG && sz > sz_thr) (void)fprintf(stdout,"%s: INFO %s received request to allocate %zu B = %zu kB = %zu MB = %zu GB\n",nco_prg_nm_get(),fnc_nm,sz,sz/NCO_BYT_PER_KB,sz/NCO_BYT_PER_MB,sz/NCO_BYT_PER_GB);
^
nco_mmr.c:103:120: warning: format '%zu' expects argument of type 'size_t', but argument 7 has type 'long unsigned int' [-Wformat=]
if(ntg_NCO_MMR_DBG && sz > sz_thr) (void)fprintf(stdout,"%s: INFO %s received request to allocate %zu B = %zu kB = %zu MB = %zu GB\n",nco_prg_nm_get(),fnc_nm,sz,sz/NCO_BYT_PER_KB,sz/NCO_BYT_PER_MB,sz/NCO_BYT_PER_GB);
^
nco_mmr.c:103:129: warning: format '%zu' expects argument of type 'size_t', but argument 8 has type 'long unsigned int' [-Wformat=]
if(ntg_NCO_MMR_DBG && sz > sz_thr) (void)fprintf(stdout,"%s: INFO %s received request to allocate %zu B = %zu kB = %zu MB = %zu GB\n",nco_prg_nm_get(),fnc_nm,sz,sz/NCO_BYT_PER_KB,sz/NCO_BYT_PER_MB,sz/NCO_BYT_PER_GB);
^
nco_mmr.c:105:95: warning: format '%zu' expects argument of type 'size_t', but argument 6 has type 'long unsigned int' [-Wformat=]
if(sz > sz_max) (void)fprintf(stdout,"%s: WARNING %s received request to allocate %zu B = %zu kB = %zu MB = %zu GB = %zu TB\n",nco_prg_nm_get(),fnc_nm,sz,sz/NCO_BYT_PER_KB,sz/NCO_BYT_PER_MB,sz/NCO_BYT_PER_GB,sz/NCO_BYT_PER_TB);
^
nco_mmr.c:105:104: warning: format '%zu' expects argument of type 'size_t', but argument 7 has type 'long unsigned int' [-Wformat=]
if(sz > sz_max) (void)fprintf(stdout,"%s: WARNING %s received request to allocate %zu B = %zu kB = %zu MB = %zu GB = %zu TB\n",nco_prg_nm_get(),fnc_nm,sz,sz/NCO_BYT_PER_KB,sz/NCO_BYT_PER_MB,sz/NCO_BYT_PER_GB,sz/NCO_BYT_PER_TB);
^
nco_mmr.c:105:113: warning: format '%zu' expects argument of type 'size_t', but argument 8 has type 'long unsigned int' [-Wformat=]
if(sz > sz_max) (void)fprintf(stdout,"%s: WARNING %s received request to allocate %zu B = %zu kB = %zu MB = %zu GB = %zu TB\n",nco_prg_nm_get(),fnc_nm,sz,sz/NCO_BYT_PER_KB,sz/NCO_BYT_PER_MB,sz/NCO_BYT_PER_GB,sz/NCO_BYT_PER_TB);
^
nco_mmr.c:105:122: warning: format '%zu' expects argument of type 'size_t', but argument 9 has type 'long long unsigned int' [-Wformat=]
if(sz > sz_max) (void)fprintf(stdout,"%s: WARNING %s received request to allocate %zu B = %zu kB = %zu MB = %zu GB = %zu TB\n",nco_prg_nm_get(),fnc_nm,sz,sz/NCO_BYT_PER_KB,sz/NCO_BYT_PER_MB,sz/NCO_BYT_PER_GB,sz/NCO_BYT_PER_TB);
^
nco_mmr.c:109:69: warning: format '%zu' expects argument of type 'size_t', but argument 6 has type 'long unsigned int' [-Wformat=]
(void)fprintf(stdout,"%s: ERROR %s unable to allocate %zu B = %zu kB = %zu MB = %zu GB\n",nco_prg_nm_get(),fnc_nm,sz,sz/NCO_BYT_PER_KB,sz/NCO_BYT_PER_MB,sz/NCO_BYT_PER_GB);
^
nco_mmr.c:109:78: warning: format '%zu' expects argument of type 'size_t', but argument 7 has type 'long unsigned int' [-Wformat=]
(void)fprintf(stdout,"%s: ERROR %s unable to allocate %zu B = %zu kB = %zu MB = %zu GB\n",nco_prg_nm_get(),fnc_nm,sz,sz/NCO_BYT_PER_KB,sz/NCO_BYT_PER_MB,sz/NCO_BYT_PER_GB);
^
nco_mmr.c:109:87: warning: format '%zu' expects argument of type 'size_t', but argument 8 has type 'long unsigned int' [-Wformat=]
(void)fprintf(stdout,"%s: ERROR %s unable to allocate %zu B = %zu kB = %zu MB = %zu GB\n",nco_prg_nm_get(),fnc_nm,sz,sz/NCO_BYT_PER_KB,sz/NCO_BYT_PER_MB,sz/NCO_BYT_PER_GB);
^
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_msa.lo nco_msa.c
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_mss_val.lo nco_mss_val.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_msa.c -fPIC -DPIC -o .libs/nco_msa.o
In file included from /usr/include/stdio.h:27:0,
from nco_msa.h:21,
from nco_msa.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_mss_val.c -fPIC -DPIC -o .libs/nco_mss_val.o
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_mta.lo nco_mta.c
In file included from /usr/include/stdio.h:27:0,
from nco_mss_val.h:21,
from nco_mss_val.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_mta.c -fPIC -DPIC -o .libs/nco_mta.o
In file included from /usr/include/stdio.h:27:0,
from nco_mta.h:21,
from nco_mta.c:12:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_netcdf.lo nco_netcdf.c
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_omp.lo nco_omp.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_netcdf.c -fPIC -DPIC -o .libs/nco_netcdf.o
In file included from /usr/include/ctype.h:25:0,
from nco_netcdf.h:43,
from nco_netcdf.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_omp.c -fPIC -DPIC -o .libs/nco_omp.o
In file included from /usr/include/stdio.h:27:0,
from nco_omp.h:17,
from nco_omp.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_pck.lo nco_pck.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_pck.c -fPIC -DPIC -o .libs/nco_pck.o
In file included from /usr/include/stdio.h:27:0,
from nco_pck.h:17,
from nco_pck.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_ppc.lo nco_ppc.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_ppc.c -fPIC -DPIC -o .libs/nco_ppc.o
In file included from /usr/include/ctype.h:25:0,
from nco_ppc.h:17,
from nco_ppc.c:13:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_prn.lo nco_prn.c
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rec_var.lo nco_rec_var.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_prn.c -fPIC -DPIC -o .libs/nco_prn.o
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rec_var.c -fPIC -DPIC -o .libs/nco_rec_var.o
In file included from /usr/include/math.h:26:0,
from nco_prn.h:21,
from nco_prn.c:11:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
In file included from /usr/include/stdio.h:27:0,
from nco_rec_var.h:17,
from nco_rec_var.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rgr.lo nco_rgr.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rgr.c -fPIC -DPIC -o .libs/nco_rgr.o
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rth_flt.lo nco_rth_flt.c
In file included from /usr/include/limits.h:25:0,
from /usr/lib/gcc/arm-linux-gnueabihf/6/include-fixed/limits.h:168,
from /usr/lib/gcc/arm-linux-gnueabihf/6/include-fixed/syslimits.h:7,
from /usr/lib/gcc/arm-linux-gnueabihf/6/include-fixed/limits.h:34,
from nco_rgr.h:17,
from nco_rgr.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rth_flt.c -fPIC -DPIC -o .libs/nco_rth_flt.o
In file included from /usr/include/math.h:26:0,
from nco_rth_flt.h:21,
from nco_rth_flt.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rth_utl.lo nco_rth_utl.c
nco_rgr.c: In function 'nco_rgr_map':
nco_rgr.c:1584:70: warning: format '%li' expects argument of type 'long int', but argument 3 has type 'size_t {aka unsigned int}' [-Wformat=]
for(lnk_idx=0;lnk_idx<lnk_nbr;lnk_idx++) (void)fprintf(stdout,"%li %d %d %g\n",lnk_idx,row_dst_adr[lnk_idx],col_src_adr[lnk_idx],wgt_raw[lnk_idx]);
^
nco_rgr.c:3419:100: warning: format '%li' expects argument of type 'long int', but argument 4 has type 'size_t {aka unsigned int}' [-Wformat=]
if(nco_dbg_lvl_get() >= nco_dbg_std) (void)fprintf(fp_stdout,"Extensive variable %s: dst_idx = %li, tally = %d, val_out_b4 = %g, wgt_vld_out = %g, val_out_after = %g\n",trv.nm,dst_idx,tally[dst_idx],var_val_dbl_out[dst_idx],wgt_vld_out[dst_idx],var_val_dbl_out[dst_idx]*wgt_vld_out[dst_idx]);
^
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rth_utl.c -fPIC -DPIC -o .libs/nco_rth_utl.o
In file included from /usr/include/math.h:26:0,
from nco_rth_utl.h:17,
from nco_rth_utl.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
nco_rgr.c: In function 'nco_grd_nfr':
nco_rgr.c:6721:112: warning: format '%li' expects argument of type 'long int', but argument 5 has type 'size_t {aka unsigned int}' [-Wformat=]
if(wrn_nbr == wrn_nbr_max) (void)fprintf(stdout,"%s: %s INFO Number of non-CCW errors reached maximum = %li, not printing anymore\n",nco_prg_nm_get(),fnc_nm,wrn_nbr_max);
^
nco_rgr.c:7596:17: warning: overflow in implicit constant conversion [-Woverflow]
long dg_nbr=NC_MIN_INT64; /* [nbr] Number of edges in mesh */
^~~~~~~~~~~~
nco_rgr.c:7599:17: warning: overflow in implicit constant conversion [-Woverflow]
long nd_nbr=NC_MIN_INT64; /* [nbr] Number of nodes in mesh */
^~~~~~~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_scl_utl.lo nco_scl_utl.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_scl_utl.c -fPIC -DPIC -o .libs/nco_scl_utl.o
In file included from /usr/include/stdio.h:27:0,
from nco_scl_utl.h:21,
from nco_scl_utl.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_scm.lo nco_scm.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_scm.c -fPIC -DPIC -o .libs/nco_scm.o
In file included from /usr/include/stdio.h:27:0,
from nco_scm.h:21,
from nco_scm.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
nco_scm.c: In function 'nco_vrs_prn':
nco_scm.c:168:25: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
const char date_cpp[]=__DATE__; /* [sng] Date from C pre-processor */
^~~~~~~~
nco_scm.c:169:25: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
const char time_cpp[]=__TIME__; /* [sng] Time from C pre-processor */
^~~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_sld.lo nco_sld.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_sld.c -fPIC -DPIC -o .libs/nco_sld.o
In file included from /usr/include/stdio.h:27:0,
from nco_sld.h:17,
from nco_sld.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_sng_utl.lo nco_sng_utl.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_sng_utl.c -fPIC -DPIC -o .libs/nco_sng_utl.o
In file included from /usr/include/stdio.h:27:0,
from nco_sng_utl.h:21,
from nco_sng_utl.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_srm.lo nco_srm.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_srm.c -fPIC -DPIC -o .libs/nco_srm.o
In file included from /usr/include/stdio.h:27:0,
from nco_srm.h:21,
from nco_srm.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_avg.lo nco_var_avg.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_avg.c -fPIC -DPIC -o .libs/nco_var_avg.o
In file included from /usr/include/math.h:26:0,
from nco_var_avg.h:17,
from nco_var_avg.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_lst.lo nco_var_lst.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_lst.c -fPIC -DPIC -o .libs/nco_var_lst.o
In file included from /usr/include/assert.h:35:0,
from nco_var_lst.h:21,
from nco_var_lst.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_rth.lo nco_var_rth.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_rth.c -fPIC -DPIC -o .libs/nco_var_rth.o
In file included from /usr/include/math.h:26:0,
from nco_var_rth.h:21,
from nco_var_rth.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_scv.lo nco_var_scv.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_scv.c -fPIC -DPIC -o .libs/nco_var_scv.o
In file included from /usr/include/math.h:26:0,
from nco_var_scv.h:17,
from nco_var_scv.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_utl.lo nco_var_utl.c
libtool: compile: gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_utl.c -fPIC -DPIC -o .libs/nco_var_utl.o
In file included from /usr/include/assert.h:35:0,
from nco_var_utl.h:21,
from nco_var_utl.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncap_utl.o ncap_utl.c
In file included from /usr/include/assert.h:35:0,
from ncap_utl.c:10:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncap.o ncap.c
In file included from /usr/include/assert.h:35:0,
from ncap.c:41:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncap_yacc.o ncap_yacc.c
In file included from /usr/include/math.h:26:0,
from ncap_yacc.y:41:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
test -f ncap_lex.c || /bin/bash ../../autobld/ylwrap ncap_lex.l lex.nco_yy.c ncap_lex.c -- flex -Pnco_yy
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncatted.o ncatted.c
In file included from /usr/include/math.h:26:0,
from ncatted.c:104:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncbo.o ncbo.c
In file included from /usr/include/math.h:26:0,
from ncbo.c:58:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncecat.o ncecat.c
In file included from /usr/include/math.h:26:0,
from ncecat.c:46:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncflint.o ncflint.c
In file included from /usr/include/math.h:26:0,
from ncflint.c:43:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncks.o ncks.c
In file included from /usr/include/assert.h:35:0,
from ncks.c:67:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncpdq.o ncpdq.c
In file included from /usr/include/math.h:26:0,
from ncpdq.c:46:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncra.o ncra.c
In file included from /usr/include/math.h:26:0,
from ncra.c:62:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncrename.o ncrename.c
In file included from /usr/include/math.h:26:0,
from ncrename.c:42:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncwa.o ncwa.c
In file included from /usr/include/math.h:26:0,
from ncwa.c:44:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
ncrename.c: In function 'main':
ncrename.c:528:148: warning: format '%ld' expects argument of type 'long int', but argument 7 has type 'size_t {aka unsigned int}' [-Wformat=]
if(nco_dbg_lvl_get() >= nco_dbg_io) (void)fprintf(stdout,"%s: att_rnm_lst[].old_nm = \"%s\", obj_nm = \"%s\", att_is_opt = %d, att_mch_fst = %ld, obj_is_opt = %d, obj_mch_fst = %ld, mch_fll_nm = %d, mch_grp_all = %d, mch_grp_glb = %d, mch_obj_all = %d\n",nco_prg_nm,att_rnm_lst[idx_att].old_nm,obj_nm,att_is_opt,att_mch_fst,obj_is_opt,obj_mch_fst,mch_fll_nm,mch_grp_all,mch_grp_glb,mch_obj_all);
^
ncrename.c:528:184: warning: format '%ld' expects argument of type 'long int', but argument 9 has type 'size_t {aka unsigned int}' [-Wformat=]
if(nco_dbg_lvl_get() >= nco_dbg_io) (void)fprintf(stdout,"%s: att_rnm_lst[].old_nm = \"%s\", obj_nm = \"%s\", att_is_opt = %d, att_mch_fst = %ld, obj_is_opt = %d, obj_mch_fst = %ld, mch_fll_nm = %d, mch_grp_all = %d, mch_grp_glb = %d, mch_obj_all = %d\n",nco_prg_nm,att_rnm_lst[idx_att].old_nm,obj_nm,att_is_opt,att_mch_fst,obj_is_opt,obj_mch_fst,mch_fll_nm,mch_grp_all,mch_grp_glb,mch_obj_all);
^
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncap_lex.o ncap_lex.c
In file included from /usr/include/stdio.h:27:0,
from ncap_lex.c:38:
/usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -release 4.6.7 -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-z,relro -Wl,-z,now -o libnco.la -rpath /usr/lib/nco nco_att_utl.lo nco_aux.lo nco_bnr.lo nco_cln_utl.lo nco_cnf_dmn.lo nco_cnf_typ.lo nco_cnk.lo nco_cnv_arm.lo nco_cnv_csm.lo nco_ctl.lo nco_dbg.lo nco_dmn_utl.lo nco_fl_utl.lo nco_grp_utl.lo nco_grp_trv.lo nco_lmt.lo nco_lst_utl.lo nco_md5.lo nco_mmr.lo nco_msa.lo nco_mss_val.lo nco_mta.lo nco_netcdf.lo nco_omp.lo nco_pck.lo nco_ppc.lo nco_prn.lo nco_rec_var.lo nco_rgr.lo nco_rth_flt.lo nco_rth_utl.lo nco_scl_utl.lo nco_scm.lo nco_sld.lo nco_sng_utl.lo nco_srm.lo nco_var_avg.lo nco_var_lst.lo nco_var_rth.lo nco_var_scv.lo nco_var_utl.lo -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -ludunits2
libtool: link: g++-6 -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/6/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/6/crtbeginS.o .libs/nco_att_utl.o .libs/nco_aux.o .libs/nco_bnr.o .libs/nco_cln_utl.o .libs/nco_cnf_dmn.o .libs/nco_cnf_typ.o .libs/nco_cnk.o .libs/nco_cnv_arm.o .libs/nco_cnv_csm.o .libs/nco_ctl.o .libs/nco_dbg.o .libs/nco_dmn_utl.o .libs/nco_fl_utl.o .libs/nco_grp_utl.o .libs/nco_grp_trv.o .libs/nco_lmt.o .libs/nco_lst_utl.o .libs/nco_md5.o .libs/nco_mmr.o .libs/nco_msa.o .libs/nco_mss_val.o .libs/nco_mta.o .libs/nco_netcdf.o .libs/nco_omp.o .libs/nco_pck.o .libs/nco_ppc.o .libs/nco_prn.o .libs/nco_rec_var.o .libs/nco_rgr.o .libs/nco_rth_flt.o .libs/nco_rth_utl.o .libs/nco_scl_utl.o .libs/nco_scm.o .libs/nco_sld.o .libs/nco_sng_utl.o .libs/nco_srm.o .libs/nco_var_avg.o .libs/nco_var_lst.o .libs/nco_var_rth.o .libs/nco_var_scv.o .libs/nco_var_utl.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lnetcdf /usr/lib/arm-linux-gnueabihf/libcurl-gnutls.so -lgsl -lgslcblas -ludunits2 -L/usr/lib/gcc/arm-linux-gnueabihf/6 -L/usr/lib/gcc/arm-linux-gnueabihf/6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/6/../../.. -L/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/6/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/6/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -fopenmp -pthread -Wl,-soname -Wl,libnco-4.6.7.so -o .libs/libnco-4.6.7.so
libtool: link: (cd ".libs" && rm -f "libnco.so" && ln -s "libnco-4.6.7.so" "libnco.so")
libtool: link: ( cd ".libs" && rm -f "libnco.la" && ln -s "../libnco.la" "libnco.la" )
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-z,relro -Wl,-z,now -o ncatted ncatted.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -ludunits2
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-z,relro -Wl,-z,now -o ncap ncap_utl.o ncap.o ncap_yacc.o ncap_lex.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -ludunits2
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-z,relro -Wl,-z,now -o ncbo ncbo.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -ludunits2
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-z,relro -Wl,-z,now -o ncecat ncecat.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -ludunits2
libtool: link: gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncbo ncbo.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/arm-linux-gnueabihf/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco
libtool: link: gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncecat ncecat.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/arm-linux-gnueabihf/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco
libtool: link: gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncatted ncatted.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/arm-linux-gnueabihf/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco
libtool: link: gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncap ncap_utl.o ncap.o ncap_yacc.o ncap_lex.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/arm-linux-gnueabihf/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-z,relro -Wl,-z,now -o ncflint ncflint.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -ludunits2
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-z,relro -Wl,-z,now -o ncks ncks.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -ludunits2
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-z,relro -Wl,-z,now -o ncpdq ncpdq.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -ludunits2
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-z,relro -Wl,-z,now -o ncra ncra.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -ludunits2
libtool: link: gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncpdq ncpdq.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/arm-linux-gnueabihf/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco
libtool: link: gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncks ncks.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/arm-linux-gnueabihf/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco
libtool: link: gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncra ncra.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/arm-linux-gnueabihf/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco
libtool: link: gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncflint ncflint.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/arm-linux-gnueabihf/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-z,relro -Wl,-z,now -o ncrename ncrename.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -ludunits2
/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-z,relro -Wl,-z,now -o ncwa ncwa.o ncap_utl.o ncap_lex.o ncap_yacc.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -ludunits2
libtool: link: gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncrename ncrename.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/arm-linux-gnueabihf/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco
libtool: link: gcc-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncwa ncwa.o ncap_utl.o ncap_lex.o ncap_yacc.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/arm-linux-gnueabihf/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/nco'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/nco'
Making all in nco++
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/nco++'
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Invoke.o Invoke.cc
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncap2.o ncap2.cc
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncap2_utl.o ncap2_utl.cc
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncap2_att.o ncap2_att.cc
In file included from libnco++.hh:26:0,
from ncap2.cc:80:
fmc_gsl_cls.hh:45:0: warning: "NCO_GSL_VERSION" redefined
# define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION )
In file included from fmc_gsl_cls.hh:12:0,
from libnco++.hh:26,
from ncap2.cc:80:
../../config.h:431:0: note: this is the location of the previous definition
#define NCO_GSL_VERSION 204
In file included from libnco++.hh:26:0,
from Invoke.cc:13:
fmc_gsl_cls.hh:45:0: warning: "NCO_GSL_VERSION" redefined
# define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION )
In file included from fmc_gsl_cls.hh:12:0,
from libnco++.hh:26,
from Invoke.cc:13:
../../config.h:431:0: note: this is the location of the previous definition
#define NCO_GSL_VERSION 204
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sdo_utl.o sdo_utl.cc
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sym_cls.o sym_cls.cc
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fmc_cls.o fmc_cls.cc
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fmc_all_cls.o fmc_all_cls.cc
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fmc_gsl_cls.o fmc_gsl_cls.cc
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o prs_cls.o prs_cls.cc
In file included from fmc_gsl_cls.cc:10:0:
fmc_gsl_cls.hh:45:0: warning: "NCO_GSL_VERSION" redefined
# define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION )
In file included from ncap2_att.hh:5:0,
from ncap2_utl.hh:60,
from ncoGrammer.g:31,
from fmc_gsl_cls.hh:39,
from fmc_gsl_cls.cc:10:
../../config.h:431:0: note: this is the location of the previous definition
#define NCO_GSL_VERSION 204
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o NcapVar.o NcapVar.cc
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o NcapVarVector.o NcapVarVector.cc
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncoLexer.o ncoLexer.cpp
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncoParser.o ncoParser.cpp
In file included from /usr/include/c++/6/vector:69:0,
from fmc_gsl_cls.hh:23,
from fmc_gsl_cls.cc:10:
/usr/include/c++/6/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = double*; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/vector.tcc:616:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' will change in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:64:0,
from fmc_gsl_cls.hh:23,
from fmc_gsl_cls.cc:10:
/usr/include/c++/6/bits/stl_vector.h: In member function 'var_sct* gsl_spl_cls::spl_fnd(bool&, std::vector<antlr::ASTRefCount<antlr::AST> >&, fmc_cls&, ncoTree&)':
/usr/include/c++/6/bits/stl_vector.h:1375:4: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' will change in GCC 7.1
_M_range_insert(__pos, __first, __last, _IterCategory());
^~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:1375:4: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' will change in GCC 7.1
_M_range_insert(__pos, __first, __last, _IterCategory());
^~~~~~~~~~~~~~~
g++-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncoTree.o ncoTree.cpp
gcc-6 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_gsl.o nco_gsl.c
/bin/bash ../../libtool --tag=CXX --tag=CXX --mode=link g++-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -L../nco -lnco -lantlr -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-z,relro -Wl,-z,now -o ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm -ludunits2
libtool: link: g++-6 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o -L../nco /<<PKGBUILDDIR>>/src/nco/.libs/libnco.so -lantlr -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lnetcdf /usr/lib/arm-linux-gnueabihf/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/nco++'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src'
make[5]: Nothing to be done for 'all-am'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src'
Making all in man
make[4]: Entering directory '/<<PKGBUILDDIR>>/man'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/man'
Making all in doc
make[4]: Entering directory '/<<PKGBUILDDIR>>/doc'
restore=: && backupdir=".am$$" && \
am__cwd=`pwd` && CDPATH="${ZSH_VERSION+.}:" && cd . && \
rm -rf $backupdir && mkdir $backupdir && \
if (/bin/bash /<<PKGBUILDDIR>>/autobld/missing makeinfo --version) >/dev/null 2>&1; then \
for f in nco.info nco.info-[0-9] nco.info-[0-9][0-9] nco.i[0-9] nco.i[0-9][0-9]; do \
if test -f $f; then mv $f $backupdir; restore=mv; else :; fi; \
done; \
else :; fi && \
cd "$am__cwd"; \
if /bin/bash /<<PKGBUILDDIR>>/autobld/missing makeinfo -I . \
-o nco.info nco.texi; \
then \
rc=0; \
CDPATH="${ZSH_VERSION+.}:" && cd .; \
else \
rc=$?; \
CDPATH="${ZSH_VERSION+.}:" && cd . && \
$restore $backupdir/* `echo "./nco.info" | sed 's|[^/]*$||'`; \
fi; \
rm -rf $backupdir; exit $rc
make[4]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[4]: Entering directory '/<<PKGBUILDDIR>>'
make[4]: Leaving directory '/<<PKGBUILDDIR>>'
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
cd doc && /usr/bin/make clean && /usr/bin/make html
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
test -z "nco.dvi nco.pdf nco.ps nco.html" \
|| rm -rf nco.dvi nco.pdf nco.ps nco.html
rm -rf .libs _libs
rm -rf nco.t2d nco.t2p
rm -f *.lo
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
rm -rf nco.htp
if /bin/bash /<<PKGBUILDDIR>>/autobld/missing makeinfo --html --ifinfo --no-split -I . \
-o nco.htp nco.texi; \
then \
rm -rf nco.html && mv nco.htp nco.html; \
else \
rm -rf nco.htp; exit 1; \
fi
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
cd doc && /usr/bin/make nco.info && sed -i 's/xmp\/fgr[0-9].png/\/usr\/share\/doc\/nco\/&/' nco.info*
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[2]: 'nco.info' is up to date.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# currently the check phase badly fails
dh_auto_test || echo "Ignoring test failures"
make -j4 test VERBOSE=1
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make check
make[3]: Entering directory '/<<PKGBUILDDIR>>'
Making check in data
make[4]: Entering directory '/<<PKGBUILDDIR>>/data'
make[4]: Nothing to be done for 'check'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/data'
Making check in src
make[4]: Entering directory '/<<PKGBUILDDIR>>/src'
Making check in nco
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/nco'
make check-am
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/nco'
make check-TESTS
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/nco'
make[8]: Entering directory '/<<PKGBUILDDIR>>/src/nco'
============================================================================
Testsuite summary for NCO netCDF Operators 4.6.7
============================================================================
# TOTAL: 0
# PASS: 0
# SKIP: 0
# XFAIL: 0
# FAIL: 0
# XPASS: 0
# ERROR: 0
============================================================================
make[8]: Leaving directory '/<<PKGBUILDDIR>>/src/nco'
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/nco'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/nco'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/nco'
Making check in nco++
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/nco++'
make[5]: Nothing to be done for 'check'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/nco++'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src'
make[5]: Nothing to be done for 'check-am'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src'
Making check in man
make[4]: Entering directory '/<<PKGBUILDDIR>>/man'
make[4]: Nothing to be done for 'check'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/man'
Making check in doc
make[4]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[4]: Nothing to be done for 'check'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[4]: Entering directory '/<<PKGBUILDDIR>>'
make[4]: Leaving directory '/<<PKGBUILDDIR>>'
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
cd bm && ./nco_bm.pl --regress
INFO: Testing for required modules
Time::HiRes ... found.
IO::Socket ... found.
You do not have a $DATA directory defined and the test files are several GB.
Where would you like to write the test data? Data will be placed in the indicated directory,
under nco_bm, using the '--caseid' option to set the name of the subdirectory, if any.
[/sbuild-nonexistent] or specify: You entered []
Making /sbuild-nonexistent/nco_bm/ & continuing
mkdir: cannot create directory '/sbuild-nonexistent': Permission denied
failed to execute: ncks --lbr_rcd: No such file or directory
ncap2 test 01: Testing float modulo float......................................................... ERR: FAILURE in ncap2 failure: Testing float modulo float
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1.0 ]
ncap2 test 02: Testing foo=log(e_flt)^1 (may fail on old AIX TODO ncap57)......................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Testing foo=log(e_flt)^1 (may fail on old AIX TODO ncap57)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.000000]
ncap2 test 03: Testing foo=log(e_dbl)^1........................................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Testing foo=log(e_dbl)^1
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.000000000000]
ncap2 test 04: Testing foo=4*atan(1).............................................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Testing foo=4*atan(1)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [3.141592741013]
ncap2 test 05: Testing foo=erf(1) (may fail on old AIX TODO ncap57)............................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Testing foo=erf(1) (may fail on old AIX TODO ncap57)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0.842701]
ncap2 test 06: Testing foo=gamma(0.5) (may fail on old AIX TODO ncap57)........................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Testing foo=gamma(0.5) (may fail on old AIX TODO ncap57)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.772453851]
ncap2 test 07: Testing foo=sin(pi/2).............................................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Testing foo=sin(pi/2)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.000000000000]
ncap2 test 08: Testing foo=cos(pi)................................................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Testing foo=cos(pi)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-1.000000000000]
ncap2 test 09: Casting variable with same name as dimension (ncap81 failed with netCDF4 until n... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Casting variable with same name as dimension (ncap81 failed with netCDF4 until netCDF 4.3.x)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10]
ncap2 test 10: Casting variable with a single dim of sz=1 (ncap81 failed with netCDF4 until net... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Casting variable with a single dim of sz=1 (ncap81 failed with netCDF4 until netCDF 4.3.x)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10]
ncap2 test 11: Verify non-averaging functions min/max on coordinate variables..................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Verify non-averaging functions min/max on coordinate variables
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-90]
ncap2 test 12: Run script to to test gsl functions -FAILS IF NOT linked to gsl lib................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Run script to to test gsl functions -FAILS IF NOT linked to gsl lib
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0]
ncap2 test 13: Run script to to test casting, hyperslabbing and intrinsic functions............... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Run script to to test casting, hyperslabbing and intrinsic functions
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0]
ncap2 test 14: Run script to test conversion of input vars to type NC_DOUBLE using var-pointers... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Run script to test conversion of input vars to type NC_DOUBLE using var-pointers
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0]
ncap2 test 15: Run script to test udunits code.................................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncap2 failure: Run script to test udunits code
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0]
ncatted test 01: Modify all existing units attributes to meter second-1............................. !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 0
ERR: FAILURE in ncatted failure: Modify all existing units attributes to meter second-1
ERR::EXPLAIN: Result: [] != Expected: [meter second-1]
ncatted test 02: Change _FillValue attribute from 1.0e36 to 0.0 in netCDF3 file..................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncatted failure: Change _FillValue attribute from 1.0e36 to 0.0 in netCDF3 file
ERR::EXPLAIN: Result: [] != Expected: [0]
ncatted test 03: Create new _FillValue attribute.................................................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncatted failure: Create new _FillValue attribute
ERR::EXPLAIN: Result: [] != Expected: [1]
ncatted test 04: Pad header with 1000B extra for future metadata (failure OK/expected since test ... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncatted failure: Pad header with 1000B extra for future metadata (failure OK/expected since test depends on command-line length)
ERR::EXPLAIN: Result: [] != Expected: [27]
ncatted test 05: Variable wildcarding (requires regex).............................................. !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncatted failure: Variable wildcarding (requires regex)
ERR::EXPLAIN: Result: [] != Expected: [999]
ncatted test 06: Attribute wildcarding (requires regex)............................................. !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncatted failure: Attribute wildcarding (requires regex)
ERR::EXPLAIN: Result: [] != Expected: [999]
ncatted test 07: Delete all attributes.............................................................. FAILED!
ERR: FAILURE in ncatted failure: Delete all attributes
ERR::EXPLAIN: Result: [0] != Expected: [4]
ncbo test 01: Difference a packed variable and be sure everything is zero or _FillValue by ave... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncbo failure: Difference a packed variable and be sure everything is zero or _FillValue by average whole remainder and comparing to zero.) FAILS with netCDF4
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0.0]
ncbo test 02: Whole file difference with broadcasting (OK to fail here fxm TODO nco757. Works ... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncbo failure: Whole file difference with broadcasting (OK to fail here fxm TODO nco757. Works with --mmr_drt, triggers segfault on OSs like FC Linux which have C-library armor. Harmless Failure caused by free'ing dangling pointer during memory cleanup.)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [4.5]
ncbo test 03: difference scalar missing value.................................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncbo failure: difference scalar missing value
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0e36]
ncbo test 04: difference with missing value attribute............................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncbo failure: difference with missing value attribute
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1e+36]
ncbo test 05: difference without missing value attribute......................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncbo failure: difference without missing value attribute
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0]
ncbo test 06: _FillValues differ between files................................................... ERR: FAILURE in ncbo failure: _FillValues differ between files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-999.000000,-999.000000,-999.000000,-999.000000]
ncbo test 07: _FillValue in one variable (not both variables).................................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncbo failure: _FillValue in one variable (not both variables)
ERR::EXPLAIN: Result: [] != Expected: [0]
ncbo test 08: ncdiff symbolically linked to ncbo................................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncbo failure: ncdiff symbolically linked to ncbo
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1e+36]
ncbo test 09: difference with missing value attribute............................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncbo failure: difference with missing value attribute
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1e+36]
ncbo test 10: Difference without missing value attribute......................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncbo failure: Difference without missing value attribute
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0]
ncbo test 11: Difference which tests broadcasting and changing variable IDs...................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncbo failure: Difference which tests broadcasting and changing variable IDs
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-1.0]
ncbo test 12: Difference which tests 3D broadcasting............................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncbo failure: Difference which tests 3D broadcasting
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [2697]
ncbo test 13: Addition + 3D broadcasting+ MSA.................................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncbo failure: Addition + 3D broadcasting+ MSA
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [422]
ncbo test 14: Copy associated coordinates -v three_dmn_rec_var................................... ERR: FAILURE in ncbo failure: Copy associated coordinates -v three_dmn_rec_var
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time[9]=10 lat[1]=90 lon[3]=270 three_dmn_rec_var[79]=0]
ncbo test 15: Concatenate variables with different ID ordering................................... ERR: FAILURE in ncbo failure: Concatenate variables with different ID ordering
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one = 0]
nces test 01: ensemble mean of int across two files.............................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in nces failure: ensemble mean of int across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5]
nces test 02: ensemble sum of missing value across two files..................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in nces failure: ensemble sum of missing value across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0e36]
nces test 03: ensemble mean with missing values across two files................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in nces failure: ensemble mean with missing values across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0e36]
nces test 04: ensemble min of float across two files............................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in nces failure: ensemble min of float across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [2]
nces test 05: scale factor + add_offset packing/unpacking........................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in nces failure: scale factor + add_offset packing/unpacking
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [3]
nces test 06: ensemble mean of integer with integer missing values across two files.............. ERR: FAILURE in nces failure: ensemble mean of integer with integer missing values across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-999 2 3 4 5 6 7 8 -999 -999]
nces test 07: ensemble mean of 3D variable across two files with MSA............................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in nces failure: ensemble mean of 3D variable across two files with MSA
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [150]
nces test 08: Check op with OpenMP............................................................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 0
ERR: FAILURE in nces failure: Check op with OpenMP
ERR::EXPLAIN: Result: [] != Expected: [n2 = 1]
nces test 09: Ensemble mean of variable packed with netCDF convention across three files......... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in nces failure: Ensemble mean of variable packed with netCDF convention across three files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [7]
nces test 10: Ensemble mean of variable packed with HDF convention across three files............ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in nces failure: Ensemble mean of variable packed with HDF convention across three files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-8]
nces test 11: Test file loop..................................................................... ERR: FAILURE in nces failure: Test file loop
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [dgn[0]=73 dgn_var[0]=73]
nces test 12: Test mebs normalization............................................................ ERR: FAILURE in nces failure: Test mebs normalization
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one = 1]
nces test 13: Test tabs (total absolute value)................................................... ERR: FAILURE in nces failure: Test tabs (total absolute value)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one = 2]
nces test 14: Test tabs on coordinate............................................................ ERR: FAILURE in nces failure: Test tabs on coordinate
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lon[3]=270]
ncecat test 01: concatenate two files containing only scalar variables............................. ERR: FAILURE in ncecat failure: concatenate two files containing only scalar variables
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [ 1.000, ]
ncecat test 02: concatenate two 3D vars with multihyperslabbing.................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncecat failure: concatenate two 3D vars with multihyperslabbing
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [84]
ncecat test 03: Concatenate variables with different ID ordering................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncecat failure: Concatenate variables with different ID ordering
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1]
ncecat test 04: Verify concatentated coordinates do not gain new record dimension.................. ERR: FAILURE in ncecat failure: Verify concatentated coordinates do not gain new record dimension
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[1]=90]
ncecat test 05: Test group aggregation with --gag.................................................. ERR: FAILURE in ncecat failure: Test group aggregation with --gag
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one = 1]
ncflint test 01: identity weighting................................................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncflint failure: identity weighting
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0]
ncflint test 02: identity interpolation............................................................. !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncflint failure: identity interpolation
ERR::EXPLAIN: Result: [] != Expected: [2.0]
ncflint test 03: switch order of occurrence to test for commutivity................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncflint failure: switch order of occurrence to test for commutivity
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1e+36]
ncflint test 04: output type float when interpolating between two packed floats..................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncflint failure: output type float when interpolating between two packed floats
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [4]
ncflint test 05: Concatenate variables with different ID ordering................................... ERR: FAILURE in ncflint failure: Concatenate variables with different ID ordering
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one = 1]
ncks test 01: Create T42 variable named one, uniformly 1.0 over globe in %tmp_fl_03%. (FAILURE... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncks failure: Create T42 variable named one, uniformly 1.0 over globe in %tmp_fl_03%. (FAILURE with netCDF4 ncrename nco821)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1]
ncks test 02: extract filename string............................................................ SVa ok
ncks test 03: extract a dimension................................................................ ERR: FAILURE in ncks failure: extract a dimension
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [100.000000,500.000000,1000.000000]
ncks test 04: extract a variable with limits..................................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncks failure: extract a variable with limits
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [23]
ncks test 05: extract variable of type NC_INT.................................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncks failure: extract variable of type NC_INT
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10]
ncks test 06: Multi-slab lat and lon with srd.................................................... ERR: FAILURE in ncks failure: Multi-slab lat and lon with srd
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [12.0,13.0,14.0,15.0,20.0,21.0,22.0,23.0]
ncks test 07: Multi-slab with redundant hyperslabs............................................... ERR: FAILURE in ncks failure: Multi-slab with redundant hyperslabs
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [20.0,21.0,22.0,23.0]
ncks test 08: Multi-slab with coordinates........................................................ ERR: FAILURE in ncks failure: Multi-slab with coordinates
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [20.0,21.0,22.0,23.0]
ncks test 09: Double-wrapped hyperslab........................................................... ERR: FAILURE in ncks failure: Double-wrapped hyperslab
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [23.0,20.0,15.0,12.0]
ncks test 10: dimension slice using UDUnits library (fails without UDUnits library support)...... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncks failure: dimension slice using UDUnits library (fails without UDUnits library support)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [876018]
ncks test 11: dim slice using UDUnits library and cal 365_days (fails without UDUnits library ... ERR: FAILURE in ncks failure: dim slice using UDUnits library and cal 365_days (fails without UDUnits library support)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lon_cln_ttl = 10]
ncks test 12: dim slice using UDUnits library and cal 360_days (fails without UDUnits library ... ERR: FAILURE in ncks failure: dim slice using UDUnits library and cal 360_days (fails without UDUnits library support)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat_cln_ttl = 18]
ncks test 13: dimension slice using UDUnit conversion (fails without UDUnits library support).... SVn prov. ok
ncks test 14: variable wildcards A (fails without regex library)................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncks failure: variable wildcards A (fails without regex library)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [3]
ncks test 15: variable wildcards B (fails without regex library)................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncks failure: variable wildcards B (fails without regex library)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1]
ncks test 16: Print byte value................................................................... SVn ok
ncks test 17: CF convention coordinates attribute................................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncks failure: CF convention coordinates attribute
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [180]
ncks test 18: Create/copy of global _FillValue................................................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncks failure: Create/copy of global _FillValue
ERR::EXPLAIN: Result: [] != Expected: [222]
ncks test 19: Auxiliary coordinates writing -X 0.,1.,-30.,-29. -v gds_3dvar...................... ERR: FAILURE in ncks failure: Auxiliary coordinates writing -X 0.,1.,-30.,-29. -v gds_3dvar
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [gds_crd[0]=1 lon_gds[0]=0 degree]
ncks test 20: Extract CF 'ancillary_variables' variables (netCDF3 file).......................... ERR: FAILURE in ncks failure: Extract CF 'ancillary_variables' variables (netCDF3 file)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time[0]=6 cnv_CF_ncl_var_2[0]=36]
ncks test 21: Select last element using negative one index....................................... SVa ok
ncks test 22: Auxiliary coordinate writing two variables......................................... SVa ok
ncks test 23: Test -X auxiliary coordinates where underlying dimension is a non-coordinate dim... SVa ok
ncks test 24: Test attribute writing for DSD compression......................................... SVa ok
ncks test 25: Test DSD compression rounding to hundreds.......................................... SVn ok
ncks test 26: Test DSD attribute does not overwrite pre-existing rounder values.................. SVa ok
ncks test 27: Test DSD attribute does overwrite pre-existing sharper values in multi-argument ... SVa ok
ncks test 28: Test attribute writing for NSD compression......................................... SVa ok
ncks test 29: Test NSD compression rounding to three significant digits.......................... FAILED!
ERR: FAILURE in ncks failure: Test NSD compression rounding to three significant digits
ERR::EXPLAIN: Result: [1234.57] != Expected: [1235]
ncks test 30: Test NSD attribute does not overwrite pre-existing rounder values.................. SVa ok
ncks test 31: Test NSD attribute does overwrite pre-existing sharper values...................... SVa ok
ncks test 32: Test that -x exclusion of coordinate variables only works with -C.................. SVa ok
ncks test 33: Extract 'climatology' variables.................................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncks failure: Extract 'climatology' variables
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10.5]
ncks test 34: (Groups) Test wrapped limit with addtional limit (no --msa)........................ SVa ok
ncks test 35: (Groups) Test wrapped limit with additonal limit and msa user order (expect fail... ERR: FAILURE in ncks failure: (Groups) Test wrapped limit with additonal limit and msa user order (expect failure TODO nco1134)
ERR::EXPLAIN: Result: [time[2]=3 ] != Expected: [time[3]=3]
ncks test 36: Multi-argument parsing by Jerome, test last argument is time string................ ERR: FAILURE in ncks failure: Multi-argument parsing by Jerome, test last argument is time string
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [Thu Sep 15 13:03:18 PDT 2016]
ncks test 37: Multi-argument parsing test first argument......................................... ERR: FAILURE in ncks failure: Multi-argument parsing test first argument
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [bar1]
ncks test 38: Multi-argument parsing test second-to-last key is time string...................... ERR: FAILURE in ncks failure: Multi-argument parsing test second-to-last key is time string
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [Thu Sep 15 13:03:18 PDT 2016]
ncks test 39: Multi-argument parsing test arguments after time string kvm........................ ERR: FAILURE in ncks failure: Multi-argument parsing test arguments after time string kvm
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [bar4]
ncks test 40: Multi-argument parsing test when all kvms have subdelimiters....................... ERR: FAILURE in ncks failure: Multi-argument parsing test when all kvms have subdelimiters
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [bar4]
ncks test 41: Multi-argument parsing test when some of the delimiters are handled by backslash... ERR: FAILURE in ncks failure: Multi-argument parsing test when some of the delimiters are handled by backslashes
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [Thu Sep 15 13:03:18 PDT 2016]
ncks test 42: Test UDUNITS with dates as limits - fails without UDUNITS.......................... ERR: FAILURE in ncks failure: Test UDUNITS with dates as limits - fails without UDUNITS
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 9106]
ncks test 43: Test behavior when NC4_SRD_WORKAROUND would be used................................ !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 0
ERR: FAILURE in ncks failure: Test behavior when NC4_SRD_WORKAROUND would be used
ERR::EXPLAIN: Result: [] != Expected: [zg_ttl_dff = 0]
ncks test 44: Multi-argument parsing test with flags............................................. ERR: FAILURE in ncks failure: Multi-argument parsing test with flags
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [bar4]
ncpdq test 01: Reverse coordinate -a -lat -v lat.................................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncpdq failure: Reverse coordinate -a -lat -v lat
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [90]
ncpdq test 02: Reverse 3D variable a -lat,-lev,-lon -v three_dmn_var.............................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncpdq failure: Reverse 3D variable a -lat,-lev,-lon -v three_dmn_var
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [23]
ncpdq test 03: Re-order 3D variable (no associated coordinates) -C -a lon,lat -v three_dmn_var ... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncpdq failure: Re-order 3D variable (no associated coordinates) -C -a lon,lat -v three_dmn_var
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [11]
ncpdq test 04: Re-order 3D variable (associated coordinates) -a lon,lat -v three_dmn_var ......... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncpdq failure: Re-order 3D variable (associated coordinates) -a lon,lat -v three_dmn_var
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [11]
ncpdq test 05: Re-order 3D variable with MSA -C -a lat,lon,time -v three_dmn_var_dbl -d time,0,... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncpdq failure: Re-order 3D variable with MSA -C -a lat,lon,time -v three_dmn_var_dbl -d time,0,3 -d time,9,9 -d lon,0,0 -d lon,3,3
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [20]
ncpdq test 06: Re-order 3D variable with MSA -C -a lat,lon,time -v three_dmn_var_dbl -d time,0,... ERR: FAILURE in ncpdq failure: Re-order 3D variable with MSA -C -a lat,lon,time -v three_dmn_var_dbl -d time,0,3 -d time,9,9 -d lon,0,0 -d lon,3,3
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [three_dmn_var_dbl]
ncpdq test 07: Re-order 3D variable with MSA (stride) -a lat,lon,time -d time,1,3,2 -d lat,1,1,... ERR: FAILURE in ncpdq failure: Re-order 3D variable with MSA (stride) -a lat,lon,time -d time,1,3,2 -d lat,1,1,1 -d lon,1,3,2 -v three_dmn_var_dbl
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[0]=90 lon[1]=270 time[0]=2 three_dmn_var_dbl[2]=16]
ncpdq test 08: Re-order 3D variable with MSA+ reversal of time dim -C -a lat,lon,-time -v three... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncpdq failure: Re-order 3D variable with MSA+ reversal of time dim -C -a lat,lon,-time -v three_dmn_var_dbl -d time,0,3 -d time,9,9 -d lon,0,0 -d lon,3,3
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [8]
ncpdq test 09: Re-order 3D variable with MSA and --msa_usr_rdr flag -C -a lon,lat -v three_dmn_... ERR: FAILURE in ncpdq failure: Re-order 3D variable with MSA and --msa_usr_rdr flag -C -a lon,lat -v three_dmn_var_dbl -d time,0,2 -d time,4 -d lat,1 -d lat,1 --msa_usr_rdr
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [13,13]
ncpdq test 10: Re-order 2D variable (-C, no MSA, no-reorder) -v two_dmn_var -a lat,lev............ ERR: FAILURE in ncpdq failure: Re-order 2D variable (-C, no MSA, no-reorder) -v two_dmn_var -a lat,lev
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[1] lev[1] two_dmn_var[4]=17.5 fraction]
ncpdq test 11: Re-order 2D variable (-C, no MSA) -v two_dmn_var -a lev,lat........................ ERR: FAILURE in ncpdq failure: Re-order 2D variable (-C, no MSA) -v two_dmn_var -a lev,lat
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[1] lat[1] two_dmn_var[3]=17.5 fraction]
ncpdq test 12: Re-order 2D variable (no -C, no MSA) -v two_dmn_var -a lev,lat..................... ERR: FAILURE in ncpdq failure: Re-order 2D variable (no -C, no MSA) -v two_dmn_var -a lev,lat
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[1]=500 lat[1]=90 two_dmn_var[3]=17.5 fraction]
ncpdq test 13: Re-order 2D variable (-C, MSA) -v two_dmn_var -a lev,lat -d lat,1,1 -d lev,1,1..... ERR: FAILURE in ncpdq failure: Re-order 2D variable (-C, MSA) -v two_dmn_var -a lev,lat -d lat,1,1 -d lev,1,1
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[0] lat[0] two_dmn_var[0]=17.5 fraction]
ncpdq test 14: Re-order 2D variable (no -C, MSA) -v two_dmn_var -a lev,lat -d lat,1,1 -d lev,1,... ERR: FAILURE in ncpdq failure: Re-order 2D variable (no -C, MSA) -v two_dmn_var -a lev,lat -d lat,1,1 -d lev,1,1
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[0]=500 lat[0]=90 two_dmn_var[0]=17.5 fraction]
ncpdq test 15: Re-order 2D variable with record (-C, no MSA) -v two_dmn_rec_var -C -a lev,time.... ERR: FAILURE in ncpdq failure: Re-order 2D variable with record (-C, no MSA) -v two_dmn_rec_var -C -a lev,time
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[1] time[1] two_dmn_rec_var[11]=2.1 watt meter-2]
ncpdq test 16: Re-order 2D variable with record (no -C, no MSA) -v two_dmn_rec_var -a lev,time.... ERR: FAILURE in ncpdq failure: Re-order 2D variable with record (no -C, no MSA) -v two_dmn_rec_var -a lev,time
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[1]=500 time[1]=2 two_dmn_rec_var[11]=2.1 watt meter-2]
ncpdq test 17: Re-order 2D variable with record (-C, MSA) -a lev,time -d time,1,1 -d lev,1,1 -v... ERR: FAILURE in ncpdq failure: Re-order 2D variable with record (-C, MSA) -a lev,time -d time,1,1 -d lev,1,1 -v two_dmn_rec_var
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[0] time[0] two_dmn_rec_var[0]=2.1 watt meter-2]
ncpdq test 18: Re-order 2D variable with record (no -C, MSA) -a lev,time -d time,1,1 -d lev,1,1... ERR: FAILURE in ncpdq failure: Re-order 2D variable with record (no -C, MSA) -a lev,time -d time,1,1 -d lev,1,1 -v two_dmn_rec_var
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[0]=500 time[0]=2 two_dmn_rec_var[0]=2.1 watt meter-2]
ncpdq test 19: Reverse/Re-order 3D variable -a -lat,-time -v three_dmn_var_dbl -d time,1,1 -d l... ERR: FAILURE in ncpdq failure: Reverse/Re-order 3D variable -a -lat,-time -v three_dmn_var_dbl -d time,1,1 -d lat,1,1 -d lon,1,1
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[1]=-90 time[2]=2 lon[0]=90 three_dmn_var_dbl[5]=10]
ncpdq test 20: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (no MSA) Test1...... ERR: FAILURE in ncpdq failure: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (no MSA) Test1
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[1]=90 time[1]=2 ty[11]=4]
ncpdq test 21: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (no MSA) Test2...... ERR: FAILURE in ncpdq failure: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (no MSA) Test2
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[1]=90 time[1]=2 lon[1]=90 three_dmn_rec_var[45]=14]
ncpdq test 22: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (MSA) Test1 read ... ERR: FAILURE in ncpdq failure: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (MSA) Test1 read ty
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[0]=90 time[2]=6 ty[2]=12]
ncpdq test 23: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (MSA) Test2 read ... ERR: FAILURE in ncpdq failure: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (MSA) Test2 read three_dmn_rec_var
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[0]=90 time[1]=4 lon[1]=90 three_dmn_rec_var[5]=30]
ncpdq test 24: Re-order several variables -a lat,time -v ty,three_dmn_rec_var Test3 check recor... ERR: FAILURE in ncpdq failure: Re-order several variables -a lat,time -v ty,three_dmn_rec_var Test3 check record for lat
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [three_dmn_rec_var dimension 0: lat, size = 2]
ncpdq test 25: Re-order several variables -a lat,time -v ty,three_dmn_rec_var Test4 check non-r... ERR: FAILURE in ncpdq failure: Re-order several variables -a lat,time -v ty,three_dmn_rec_var Test4 check non-record dim is time
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [)emit si etanidrooC(]
ncpdq test 26: Reverse/Re-order 4D variable -a lev,time,-lon,-lat -v four_dmn_rec_var (MSA)....... ERR: FAILURE in ncpdq failure: Reverse/Re-order 4D variable -a lev,time,-lon,-lat -v four_dmn_rec_var (MSA)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[0]=500 time[2]=6 lon[0]=90 lat[0]=90 four_dmn_rec_var[2]=138]
ncpdq test 27: Re-order 3D variable (only 1 in -a) -a lat,time -v PS,three_dmn_var_crd (MSA)...... ERR: FAILURE in ncpdq failure: Re-order 3D variable (only 1 in -a) -a lat,time -v PS,three_dmn_var_crd (MSA)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[0]=90 lev[0]=500 lon[0]=90 three_dmn_var_crd[0]=17]
ncpdq test 28: Re-order all variables -a lat,time (MSA)........................................... ERR: FAILURE in ncpdq failure: Re-order all variables -a lat,time (MSA)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[0]=90 time[0]=2 lev[2]=1000 lon[2]=180 four_dmn_rec_var[10]=47]
ncpdq test 29: Pack and then unpack scalar (uses only add_offset) -P all_new -v upk............... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncpdq failure: Pack and then unpack scalar (uses only add_offset) -P all_new -v upk
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [3]
ncpdq test 30: Unpack 1D variable with MSA -C P upk -v rec_var_dbl_mss_val_dbl_pck -d time,0,4 ... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncpdq failure: Unpack 1D variable with MSA -C P upk -v rec_var_dbl_mss_val_dbl_pck -d time,0,4 -d time,6
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [7]
ncpdq test 31: Pack 3D variable with MSA -C -P all_xst -v three_dmn_var_dbl -d time,0,2 -d time... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncpdq failure: Pack 3D variable with MSA -C -P all_xst -v three_dmn_var_dbl -d time,0,2 -d time,8,9 -d lon,0 -d lon,1 -d lat,1
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [17505]
ncpdq test 32: Unpack 1D variable twice to verify first unpacking does not inadvertently store ... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncpdq failure: Unpack 1D variable twice to verify first unpacking does not inadvertently store packing attributes
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [7]
ncpdq test 33: Unpack 1D variable with netCDF convention.......................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncpdq failure: Unpack 1D variable with netCDF convention
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [7]
ncpdq test 34: Unpack 1D variable with HDF convention............................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncpdq failure: Unpack 1D variable with HDF convention
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-8]
ncpdq test 35: Re-pack 1D variable from HDF convention to netCDF convention....................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncpdq failure: Re-pack 1D variable from HDF convention to netCDF convention
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-8]
ncrcat test 01: Concatenate float with double missing values across two files...................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrcat failure: Concatenate float with double missing values across two files
ERR::EXPLAIN: Result: [] != Expected: [2]
ncrcat test 02: Concatenate record coordinate-bounded variable across two non-monotonic files...... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 0
ERR: FAILURE in ncrcat failure: Concatenate record coordinate-bounded variable across two non-monotonic files
ERR::EXPLAIN: Result: [] != Expected: [2 3 2 3]
ncrcat test 03: Concatenate float variable with multislabs across two files........................ !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrcat failure: Concatenate float variable with multislabs across two files
ERR::EXPLAIN: Result: [] != Expected: [20]
ncrcat test 04: Concatenate int variable with multislabs across two files.......................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrcat failure: Concatenate int variable with multislabs across two files
ERR::EXPLAIN: Result: [] != Expected: [28]
ncrcat test 05: Concatenate float 4D variable with multislabs across two files..................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrcat failure: Concatenate float 4D variable with multislabs across two files
ERR::EXPLAIN: Result: [] != Expected: [204]
ncrcat test 06: Concatenate 1D variable with stride across two files............................... ERR: FAILURE in ncrcat failure: Concatenate 1D variable with stride across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [ 1, 5, 9,13,17]
ncrcat test 07: Concatenate 1D variable with stride across three files............................. ERR: FAILURE in ncrcat failure: Concatenate 1D variable with stride across three files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [ 1, 9,17,25]
ncrcat test 08: Concatenate 1D variable with stride across files with different record dimension... ERR: FAILURE in ncrcat failure: Concatenate 1D variable with stride across files with different record dimensions
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [11,13,15,27]
ncrcat test 09: Concatenate 1D variable across two files no limits. Requires UDUnits............... ERR: FAILURE in ncrcat failure: Concatenate 1D variable across two files no limits. Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 210]
ncrcat test 10: Concatenate 1D variable across three files double limits. Requires UDUnits......... ERR: FAILURE in ncrcat failure: Concatenate 1D variable across three files double limits. Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 17]
ncrcat test 11: Concatenate 1D variable across three files double limits2. Requires UDUnits........ ERR: FAILURE in ncrcat failure: Concatenate 1D variable across three files double limits2. Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 155]
ncrcat test 12: Concatenate 1D variable across three files time stamp limits2. Requires UDUnits.... ERR: FAILURE in ncrcat failure: Concatenate 1D variable across three files time stamp limits2. Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 33]
ncrcat test 13: Cat. 1D var over 3 files with large stride. Requires UDUnits....................... ERR: FAILURE in ncrcat failure: Cat. 1D var over 3 files with large stride. Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 33]
ncrcat test 14: Cat. 1D var over 3 files coord limits+stride. Requires UDUnits..................... ERR: FAILURE in ncrcat failure: Cat. 1D var over 3 files coord limits+stride. Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 51]
ncrcat test 15: Cat. 1D var over three files date-stamp limits+stride. Requires UDUnits............ ERR: FAILURE in ncrcat failure: Cat. 1D var over three files date-stamp limits+stride. Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 51]
ncrcat test 16: Cat. 1D var over 3 files date-stamp limits+stride. Requires UDUnits................ ERR: FAILURE in ncrcat failure: Cat. 1D var over 3 files date-stamp limits+stride. Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 54]
ncrcat test 17: Cat. 1D variable over 3 files dmn limits+stride. Requires UDUnits.................. ERR: FAILURE in ncrcat failure: Cat. 1D variable over 3 files dmn limits+stride. Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 20]
ncrcat test 18: Cat. 1D var over 4 files different record sizes. Requires UDUnits.................. ERR: FAILURE in ncrcat failure: Cat. 1D var over 4 files different record sizes. Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 92]
ncrcat test 19: Cat. 1D var over 4 files with srd=4 different rec sizes. Requires UDUnits.......... ERR: FAILURE in ncrcat failure: Cat. 1D var over 4 files with srd=4 different rec sizes. Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 28]
ncrcat test 20: Cat. 1D var over 4 files with srd=3 str/end timestamps. Requires UDUnits........... ERR: FAILURE in ncrcat failure: Cat. 1D var over 4 files with srd=3 str/end timestamps. Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 45]
ncrcat test 21: Append records to existing file without copying original........................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncrcat failure: Append records to existing file without copying original
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10]
ncrcat test 22: Concatenate 1D variable across two files. [hours file1 - days file2] .Requires U... ERR: FAILURE in ncrcat failure: Concatenate 1D variable across two files. [hours file1 - days file2] .Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 1475]
ncrcat test 23: Concatenate 1D variable across 1 file with temperature (Celsius) limits............ ERR: FAILURE in ncrcat failure: Concatenate 1D variable across 1 file with temperature (Celsius) limits
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 5]
ncrcat test 24: Concatenate 1D variable across 1 file. [limits - timstamp day_360 calendar] .Req... ERR: FAILURE in ncrcat failure: Concatenate 1D variable across 1 file. [limits - timstamp day_360 calendar] .Requires UDUnits.
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 10]
ncrcat test 25: Concatenate 1D variable across two files no limits check climatology_bounds . Re... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 0
ERR: FAILURE in ncrcat failure: Concatenate 1D variable across two files no limits check climatology_bounds . Requires UDUnits.
ERR::EXPLAIN: Result: [] != Expected: [climo_ttl = 420]
ncrcat test 26: Detect input_complete when stride skips user-specified idx_end_max................. ERR: FAILURE in ncrcat failure: Detect input_complete when stride skips user-specified idx_end_max
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1, 10,]
ncrcat test 27: Another detect input_complete when stride skips user-specified idx_end_max......... ERR: FAILURE in ncrcat failure: Another detect input_complete when stride skips user-specified idx_end_max
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1, 3,]
ncra test 01: record sdn of float with double missing values across two files.................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record sdn of float with double missing values across two files
ERR::EXPLAIN: Result: [] != Expected: [2]
ncra test 02: record mean of int across two files................................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record mean of int across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [6]
ncra test 03: record mean of float with double missing values.................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record mean of float with double missing values
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5]
ncra test 04: record mean of float with integer missing values................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record mean of float with integer missing values
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5]
ncra test 05: record mean of integer with integer missing values................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record mean of integer with integer missing values
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5]
ncra test 06: record mean of integer with integer missing values across two files................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record mean of integer with integer missing values across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5]
ncra test 07: record mean of integer with float missing values................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record mean of integer with float missing values
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5]
ncra test 08: record mean of integer with float missing values across two files.................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record mean of integer with float missing values across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5]
ncra test 09: record mean of packed double with double missing values............................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record mean of packed double with double missing values
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5]
ncra test 10: record mean of packed double to test precision..................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record mean of packed double to test precision
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [100.55]
ncra test 11: record mean of packed float to test precision...................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record mean of packed float to test precision
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [100.55]
ncra test 12: pass through non-record (i.e., non-processed) packed data to output................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: pass through non-record (i.e., non-processed) packed data to output
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1]
ncra test 13: record mean of float with double missing values across two files................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record mean of float with double missing values across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5]
ncra test 14: record min of float with double missing values across two files.................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record min of float with double missing values across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [2]
ncra test 15: record max of float with double missing values across two files.................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record max of float with double missing values across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [8]
ncra test 16: record ttl of float with double missing values across two files.................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record ttl of float with double missing values across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [70]
ncra test 17: record rms of float with double missing values across two files.................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: record rms of float with double missing values across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5.38516]
ncra test 18: Return mean time coordinate (when computing totals) across two files............... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: Return mean time coordinate (when computing totals) across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5.5]
ncra test 19: Return total record (when computing totals) across two files....................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: Return total record (when computing totals) across two files
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [110]
ncra test 20: Return record average of cell-based geodesic data.................................. ERR: FAILURE in ncra failure: Return record average of cell-based geodesic data
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [ 277.7 277.8 277.9 278.0 278.1 278.2]
ncra test 21: Check op with OpenMP............................................................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 0
ERR: FAILURE in ncra failure: Check op with OpenMP
ERR::EXPLAIN: Result: [] != Expected: [n2 = 1]
ncra test 22: Append records to existing file without copying original........................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: Append records to existing file without copying original
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [6]
ncra test 23: Treatment of missing values with MRO and rth_dbl................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: Treatment of missing values with MRO and rth_dbl
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [__]
ncra test 24: Handle scale factor and missing value with rth_dbl................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: Handle scale factor and missing value with rth_dbl
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5.5]
ncra test 25: Test per-file weighting with --wgt 28,29,30........................................ ERR: FAILURE in ncra failure: Test per-file weighting with --wgt 28,29,30
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1, 2.45, 3,]
ncra test 26: Test per-record weighting with --wgt=one_dmn_rec_wgt............................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: Test per-record weighting with --wgt=one_dmn_rec_wgt
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.33333]
ncra test 27: Test per-file weighting without missing values..................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: Test per-file weighting without missing values
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [2.33333]
ncra test 28: Test per-file weighting with missing values with --wgt 1,2,3....................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: Test per-file weighting with missing values with --wgt 1,2,3
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [2.6]
ncra test 29: Test per-file weighting with missing values with --wgt 3,2,1....................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: Test per-file weighting with missing values with --wgt 3,2,1
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0]
ncra test 30: Test MSA running average (expect failure TODO nco1126)............................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncra failure: Test MSA running average (expect failure TODO nco1126)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.5]
ncwa test 01: Creating %tmp_fl_03% again (FAILURE netCDF4 ncrename nco821) ...................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Creating %tmp_fl_03% again (FAILURE netCDF4 ncrename nco821)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1]
ncwa test 02: normalize by denominator upper hemisphere (FAILURE netCDF4 ncrename nco821)........ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: normalize by denominator upper hemisphere (FAILURE netCDF4 ncrename nco821)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1]
ncwa test 03: return average coordinate coordinate variable during minimization for non-coordi... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: return average coordinate coordinate variable during minimization for non-coordinate variables
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0]
ncwa test 04: pass through non-averaged (i.e., non-processed) packed data to output.............. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: pass through non-averaged (i.e., non-processed) packed data to output
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1]
ncwa test 05: do not normalize by denominator (FAILURE netCDF4 nco946)........................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: do not normalize by denominator (FAILURE netCDF4 nco946)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [50]
ncwa test 06: average with missing value attribute............................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: average with missing value attribute
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [73]
ncwa test 07: average without missing value attribute............................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: average without missing value attribute
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5.0e35]
ncwa test 08: average masked coordinate.......................................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: average masked coordinate
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [90.0]
ncwa test 09: average masked variable............................................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: average masked variable
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [2.0]
ncwa test 10: average masked, weighted coordinate................................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: average masked, weighted coordinate
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [100.0]
ncwa test 11: average masked, weighted variable.................................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: average masked, weighted variable
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [666.6667]
ncwa test 12: weight conforms to variable first time............................................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: weight conforms to variable first time
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-90.0]
ncwa test 13: average all missing values with weights............................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: average all missing values with weights
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0e36]
ncwa test 14: average some missing values with unity weights..................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: average some missing values with unity weights
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0]
ncwa test 15: average masked variable with some missing values................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: average masked variable with some missing values
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0.5]
ncwa test 16: average uniform field with uniform weights......................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: average uniform field with uniform weights
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10]
ncwa test 17: average uniform field with asymmetric weights...................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: average uniform field with asymmetric weights
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10]
ncwa test 18: average asymmetric field with asymmetric weights................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: average asymmetric field with asymmetric weights
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10]
ncwa test 19: min switch on type double, some missing values..................................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: min switch on type double, some missing values
ERR::EXPLAIN: Result: [] != Expected: [2]
ncwa test 20: Dimension reduction with min switch and missing values............................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Dimension reduction with min switch and missing values
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-99]
ncwa test 21: Dimension reduction with min switch................................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Dimension reduction with min switch
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [77]
ncwa test 22: Dimension reduction on type int with min switch and missing values................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Dimension reduction on type int with min switch and missing values
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-99]
ncwa test 23: Dimension reduction on type int variable........................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Dimension reduction on type int variable
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [25]
ncwa test 24: Dimension reduction on type short variable with min switch and missing values...... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Dimension reduction on type short variable with min switch and missing values
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-99]
ncwa test 25: Dimension reduction on type short variable......................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Dimension reduction on type short variable
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [29]
ncwa test 26: Dimension reduction with min flag on type float variable........................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Dimension reduction with min flag on type float variable
ERR::EXPLAIN: Result: [] != Expected: [1]
ncwa test 27: Max flag on type float variable.................................................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Max flag on type float variable
ERR::EXPLAIN: Result: [] != Expected: [240]
ncwa test 28: Dimension reduction on type double variable with max switch and missing values..... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Dimension reduction on type double variable with max switch and missing values
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-99]
ncwa test 29: Dimension reduction on type double variable........................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Dimension reduction on type double variable
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [40]
ncwa test 30: Dimension reduction on type int variable with min switch and missing values........ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Dimension reduction on type int variable with min switch and missing values
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-99]
ncwa test 31: Dimension reduction on type int variable........................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Dimension reduction on type int variable
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [29]
ncwa test 32: Dimension reduction on type short variable with max switch and missing values...... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Dimension reduction on type short variable with max switch and missing values
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-99]
ncwa test 33: Dimension reduction on type short, max switch variable............................. !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Dimension reduction on type short, max switch variable
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [69]
ncwa test 34: Weights at root group level........................................................ !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Weights at root group level
ERR::EXPLAIN: Result: [] != Expected: [30]
ncwa test 35: weights would cause SIGFPE without dbl_prc patch................................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: weights would cause SIGFPE without dbl_prc patch
ERR::EXPLAIN: Result: [] != Expected: [1]
ncwa test 36: avg would overflow without dbl_prc patch........................................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: avg would overflow without dbl_prc patch
ERR::EXPLAIN: Result: [] != Expected: [17000]
ncwa test 37: test wrapped ttl with dbl_prc patch (harmless failure expected/OK on all chips s... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: test wrapped ttl with dbl_prc patch (harmless failure expected/OK on all chips since wrap behavior is not IEEE-specified)
ERR::EXPLAIN: Result: [] != Expected: [-31536]
ncwa test 38: min with weights................................................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: min with weights
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-900]
ncwa test 39: max with weights................................................................... !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: max with weights
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [900]
ncwa test 40: Return mean time coordinate (when computing totals)................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Return mean time coordinate (when computing totals)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5.5]
ncwa test 41: Return total record (when computing totals)........................................ !!FAILED
$cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Return total record (when computing totals)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [55]
ncwa test 42: Retain degenerate dimensions (one variable)........................................ ERR: FAILURE in ncwa failure: Retain degenerate dimensions (one variable)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lon[0]=135]
ncwa test 43: Retain degenerate dimensions (all variables)....................................... ERR: FAILURE in ncwa failure: Retain degenerate dimensions (all variables)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lon[0]=135]
ncwa test 44: Cell methods (Create, average) -v one,one_dmn_rec_var,three_dmn_rec_var -a time,... ERR: FAILURE in ncwa failure: Cell methods (Create, average) -v one,one_dmn_rec_var,three_dmn_rec_var -a time,lon
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [three_dmn_rec_var attribute 3: cell_methods, size = 15 NC_CHAR, value = time, lon: mean]
ncwa test 45: Cell methods (Create, average) -v one,one_dmn_rec_var,three_dmn_rec_var -a time,... ERR: FAILURE in ncwa failure: Cell methods (Create, average) -v one,one_dmn_rec_var,three_dmn_rec_var -a time,lon
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one_dmn_rec_var attribute 2: cell_methods, size = 10 NC_CHAR, value = time: mean]
ncwa test 46: Cell methods (Create, maximum) -v one,one_dmn_rec_var,three_dmn_rec_var -a time,... ERR: FAILURE in ncwa failure: Cell methods (Create, maximum) -v one,one_dmn_rec_var,three_dmn_rec_var -a time,lon
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [three_dmn_rec_var attribute 3: cell_methods, size = 18 NC_CHAR, value = time, lon: maximum]
ncwa test 47: Mask condition with negative value................................................. ERR: FAILURE in ncwa failure: Mask condition with negative value
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [Lat = _]
ncwa test 48: Minimization on packed single-precision float...................................... ERR: FAILURE in ncwa failure: Minimization on packed single-precision float
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [non_rec_var_flt_pck = 100.1]
ncwa test 49: Simple weights..................................................................... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncwa failure: Simple weights
ERR::EXPLAIN: Result: [] != Expected: [1.333333]
ncwa test 50: Test mebs normalization............................................................ ERR: FAILURE in ncwa failure: Test mebs normalization
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one_dmn_rec_var_flt = 5.5]
ncwa test 51: Test tabs (total absolute value)................................................... ERR: FAILURE in ncwa failure: Test tabs (total absolute value)
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one_dmn_rec_var = 55]
ncwa test 52: Test tabs on coordinate............................................................ ERR: FAILURE in ncwa failure: Test tabs on coordinate
ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lon = 135]
ncrenam test 01: netCDF3: Valid values after renaming coordinate dimension in netCDF3 file.......... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrename failure: netCDF3: Valid values after renaming coordinate dimension in netCDF3 file
ERR::EXPLAIN: Result: [] != Expected: [1]
ncrenam test 02: netCDF3: Valid values after renaming coordinate variable in netCDF3 file........... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrename failure: netCDF3: Valid values after renaming coordinate variable in netCDF3 file
ERR::EXPLAIN: Result: [] != Expected: [1]
ncrenam test 03: netCDF3: Valid values after renaming coordinate dimension and variable in netCDF... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrename failure: netCDF3: Valid values after renaming coordinate dimension and variable in netCDF3 file
ERR::EXPLAIN: Result: [] != Expected: [1]
ncrenam test 04: netCDF4-classic: Valid values after renaming coordinate dimension in netCDF4-cla... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrename failure: netCDF4-classic: Valid values after renaming coordinate dimension in netCDF4-classic file
ERR::EXPLAIN: Result: [] != Expected: [1]
ncrenam test 05: netCDF4-classic: Valid values after renaming coordinate variable in netCDF4-clas... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrename failure: netCDF4-classic: Valid values after renaming coordinate variable in netCDF4-classic file
ERR::EXPLAIN: Result: [] != Expected: [1]
ncrenam test 06: netCDF4-classic: Valid values after renaming coordinate dimension and variable i... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrename failure: netCDF4-classic: Valid values after renaming coordinate dimension and variable in netCDF4-classic file
ERR::EXPLAIN: Result: [] != Expected: [1]
ncrenam test 07: netCDF4: Valid values after renaming coordinate dimension in netCDF4 file.......... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrename failure: netCDF4: Valid values after renaming coordinate dimension in netCDF4 file
ERR::EXPLAIN: Result: [] != Expected: [1]
ncrenam test 08: netCDF4: Valid values after renaming coordinate variable in netCDF4 file........... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrename failure: netCDF4: Valid values after renaming coordinate variable in netCDF4 file
ERR::EXPLAIN: Result: [] != Expected: [1]
ncrenam test 09: netCDF4: Valid values after renaming coordinate dimension and variable in netCDF... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrename failure: netCDF4: Valid values after renaming coordinate dimension and variable in netCDF4 file
ERR::EXPLAIN: Result: [] != Expected: [1]
ncrenam test 10: netCDF4: Simultaneously rename multiple dimensions (requires netCDF 4.4.2)......... !!FAILED
$cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1
ERR: FAILURE in ncrename failure: netCDF4: Simultaneously rename multiple dimensions (requires netCDF 4.4.2)
ERR::EXPLAIN: Result: [] != Expected: [1]
Linux mb-lxc-01 4.4.0-79-generic #100-Ubuntu SMP Wed May 17 19:58:30 UTC 2017 armv8l GNU/Linux; gcc (Raspbian 6.4.0-1+rpi1) 6.4.0 20170704;
Test Results Seconds to complete
-------------------------- ----------------------------------------
Test Success Failure Total WallClock Real User System Diff
ncap2: 0 15 15 0.00 0.00 0.00 0.00 0.00
ncatted: 0 7 7 0.63 0.00 0.00 0.00 0.00
ncbo: 0 15 15 0.42 0.00 0.00 0.00 0.00
ncflint: 0 5 5 0.09 0.00 0.00 0.00 0.00
nces: 0 14 14 0.02 0.00 0.00 0.00 0.00
ncecat: 0 5 5 0.00 0.00 0.00 0.00 0.00
ncks: 15 29 44 4.66 0.00 0.00 0.00 0.00
ncpdq: 0 35 35 0.00 0.00 0.00 0.00 0.00
ncra: 0 30 30 0.01 0.00 0.00 0.00 0.00
ncrcat: 0 27 27 0.07 0.00 0.00 0.00 0.00
ncrename: 0 10 10 0.30 0.00 0.00 0.00 0.00
ncwa: 0 52 52 0.03 0.00 0.00 0.00 0.00
NB:MD5: test passes MD5 checksum on file(s) May be more than one intermediate file.
SVx: test passes single terminal value check SVn=numeric, SVa=alphabetic
OK - data NOT sent, thanks for using NCO anyway - bye!
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
fakeroot debian/rules binary-arch
dh binary-arch --with autoreconf \
--buildsystem autoconf \
--parallel
dh_testroot -a -O--buildsystem=autoconf -O--parallel
dh_prep -a -O--buildsystem=autoconf -O--parallel
dh_installdirs -a -O--buildsystem=autoconf -O--parallel
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install
make -j1 install DESTDIR=/<<PKGBUILDDIR>>/debian/nco AM_UPDATE_INFO_DIR=no
make[2]: Entering directory '/<<PKGBUILDDIR>>'
Making install in data
make[3]: Entering directory '/<<PKGBUILDDIR>>/data'
make[4]: Entering directory '/<<PKGBUILDDIR>>/data'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/nco/usr/bin'
/usr/bin/install -c ncclimo ncremap '/<<PKGBUILDDIR>>/debian/nco/usr/bin'
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/data'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/data'
Making install in src
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
Making install in nco
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/nco'
make install-am
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/nco'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/nco'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/nco/usr/lib/nco'
/bin/bash ../../libtool --tag=CXX --mode=install /usr/bin/install -c libnco.la '/<<PKGBUILDDIR>>/debian/nco/usr/lib/nco'
libtool: install: /usr/bin/install -c .libs/libnco-4.6.7.so /<<PKGBUILDDIR>>/debian/nco/usr/lib/nco/libnco-4.6.7.so
libtool: install: (cd /<<PKGBUILDDIR>>/debian/nco/usr/lib/nco && { ln -s -f libnco-4.6.7.so libnco.so || { rm -f libnco.so && ln -s libnco-4.6.7.so libnco.so; }; })
libtool: install: /usr/bin/install -c .libs/libnco.lai /<<PKGBUILDDIR>>/debian/nco/usr/lib/nco/libnco.la
libtool: warning: remember to run 'libtool --finish /usr/lib/nco'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/nco/usr/bin'
/bin/bash ../../libtool --tag=CXX --mode=install /usr/bin/install -c ncap ncatted ncbo ncecat ncflint ncks ncpdq ncra ncrename ncwa '/<<PKGBUILDDIR>>/debian/nco/usr/bin'
libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco'
libtool: install: /usr/bin/install -c .libs/ncap /<<PKGBUILDDIR>>/debian/nco/usr/bin/ncap
libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco'
libtool: install: /usr/bin/install -c .libs/ncatted /<<PKGBUILDDIR>>/debian/nco/usr/bin/ncatted
libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco'
libtool: install: /usr/bin/install -c .libs/ncbo /<<PKGBUILDDIR>>/debian/nco/usr/bin/ncbo
libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco'
libtool: install: /usr/bin/install -c .libs/ncecat /<<PKGBUILDDIR>>/debian/nco/usr/bin/ncecat
libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco'
libtool: install: /usr/bin/install -c .libs/ncflint /<<PKGBUILDDIR>>/debian/nco/usr/bin/ncflint
libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco'
libtool: install: /usr/bin/install -c .libs/ncks /<<PKGBUILDDIR>>/debian/nco/usr/bin/ncks
libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco'
libtool: install: /usr/bin/install -c .libs/ncpdq /<<PKGBUILDDIR>>/debian/nco/usr/bin/ncpdq
libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco'
libtool: install: /usr/bin/install -c .libs/ncra /<<PKGBUILDDIR>>/debian/nco/usr/bin/ncra
libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco'
libtool: install: /usr/bin/install -c .libs/ncrename /<<PKGBUILDDIR>>/debian/nco/usr/bin/ncrename
libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco'
libtool: install: /usr/bin/install -c .libs/ncwa /<<PKGBUILDDIR>>/debian/nco/usr/bin/ncwa
make install-exec-hook
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/nco'
cd /<<PKGBUILDDIR>>/debian/nco/usr/bin && ln -s -f ncbo ncdiff || (rm -f ncdiff && ln -s -f ncbo ncdiff)
cd /<<PKGBUILDDIR>>/debian/nco/usr/bin && ln -s -f ncra ncea || (rm -f ncea && ln -s -f ncra ncea)
cd /<<PKGBUILDDIR>>/debian/nco/usr/bin && ln -s -f ncra nces || (rm -f nces && ln -s -f ncra nces)
cd /<<PKGBUILDDIR>>/debian/nco/usr/bin && ln -s -f ncra ncrcat || (rm -f ncrcat && ln -s -f ncra ncrcat)
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/nco'
make[6]: Nothing to be done for 'install-data-am'.
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/nco'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/nco'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/nco'
Making install in nco++
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/nco++'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/nco++'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/nco/usr/bin'
/bin/bash ../../libtool --tag=CXX --mode=install /usr/bin/install -c ncap2 '/<<PKGBUILDDIR>>/debian/nco/usr/bin'
libtool: warning: '/<<PKGBUILDDIR>>/src/nco/libnco.la' has not been installed in '/usr/lib/nco'
libtool: install: /usr/bin/install -c .libs/ncap2 /<<PKGBUILDDIR>>/debian/nco/usr/bin/ncap2
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/nco++'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/nco++'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
Making install in man
make[3]: Entering directory '/<<PKGBUILDDIR>>/man'
make[4]: Entering directory '/<<PKGBUILDDIR>>/man'
make[4]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/nco/usr/share/man/man1'
/usr/bin/install -c -m 644 ncap.1 ncap2.1 ncatted.1 ncbo.1 ncclimo.1 nces.1 ncecat.1 ncflint.1 ncks.1 nco.1 ncra.1 ncremap.1 ncrename.1 ncpdq.1 ncrcat.1 ncwa.1 '/<<PKGBUILDDIR>>/debian/nco/usr/share/man/man1'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/man'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/man'
Making install in doc
make[3]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[4]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[4]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/nco/usr/share/info'
/usr/bin/install -c -m 644 ./nco.info ./nco.info-1 ./nco.info-2 ./nco.info-3 ./nco.info-4 '/<<PKGBUILDDIR>>/debian/nco/usr/share/info'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[3]: Entering directory '/<<PKGBUILDDIR>>'
make[4]: Entering directory '/<<PKGBUILDDIR>>'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>'
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
find /<<PKGBUILDDIR>>/debian/nco -name '*.h' -delete
find /<<PKGBUILDDIR>>/debian/nco -name '*.hh' -delete
rm -f debian/nco/usr/lib/nco/libnco.la
rm -f debian/nco/usr/share/info/dir
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install --list-missing
dh_install: Please use dh_missing --list-missing/--fail-missing instead
dh_install: This feature will be removed in compat 11.
dh_missing: debian/tmp does not exist and there is only binary package.
dh_missing: Assuming everything is installed directly into the package directory.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a -O--buildsystem=autoconf -O--parallel
dh_installchangelogs -a -O--buildsystem=autoconf -O--parallel
dh_installexamples -a -O--buildsystem=autoconf -O--parallel
dh_installman -a -O--buildsystem=autoconf -O--parallel
dh_installcatalogs -a -O--buildsystem=autoconf -O--parallel
dh_installcron -a -O--buildsystem=autoconf -O--parallel
dh_installdebconf -a -O--buildsystem=autoconf -O--parallel
dh_installemacsen -a -O--buildsystem=autoconf -O--parallel
dh_installifupdown -a -O--buildsystem=autoconf -O--parallel
dh_installinfo -a -O--buildsystem=autoconf -O--parallel
dh_installinit -a -O--buildsystem=autoconf -O--parallel
dh_installmenu -a -O--buildsystem=autoconf -O--parallel
dh_installmime -a -O--buildsystem=autoconf -O--parallel
dh_installmodules -a -O--buildsystem=autoconf -O--parallel
dh_installlogcheck -a -O--buildsystem=autoconf -O--parallel
dh_installlogrotate -a -O--buildsystem=autoconf -O--parallel
dh_installpam -a -O--buildsystem=autoconf -O--parallel
dh_installppp -a -O--buildsystem=autoconf -O--parallel
dh_installudev -a -O--buildsystem=autoconf -O--parallel
dh_installgsettings -a -O--buildsystem=autoconf -O--parallel
dh_bugfiles -a -O--buildsystem=autoconf -O--parallel
dh_ucf -a -O--buildsystem=autoconf -O--parallel
dh_lintian -a -O--buildsystem=autoconf -O--parallel
dh_gconf -a -O--buildsystem=autoconf -O--parallel
dh_icons -a -O--buildsystem=autoconf -O--parallel
dh_perl -a -O--buildsystem=autoconf -O--parallel
dh_usrlocal -a -O--buildsystem=autoconf -O--parallel
dh_link -a -O--buildsystem=autoconf -O--parallel
dh_installwm -a -O--buildsystem=autoconf -O--parallel
dh_installxfonts -a -O--buildsystem=autoconf -O--parallel
dh_strip_nondeterminism -a -O--buildsystem=autoconf -O--parallel
dh_compress -a -O--buildsystem=autoconf -O--parallel
dh_fixperms -a -O--buildsystem=autoconf -O--parallel
dh_missing -a -O--buildsystem=autoconf -O--parallel
dh_strip -a -O--buildsystem=autoconf -O--parallel
debian/rules override_dh_makeshlibs
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_makeshlibs -Xusr/lib/nco
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_shlibdeps -a -O--buildsystem=autoconf -O--parallel
dpkg-shlibdeps: warning: debian/nco/usr/lib/nco/libnco-4.6.7.so contains an unresolvable reference to symbol nco_fmt_xtn_set: it's probably a plugin
dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: debian/nco/usr/bin/ncap2 contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/nco/usr/bin/ncwa debian/nco/usr/lib/nco/libnco-4.6.7.so debian/nco/usr/bin/ncbo debian/nco/usr/bin/ncflint debian/nco/usr/bin/ncap debian/nco/usr/bin/ncecat debian/nco/usr/bin/ncrename debian/nco/usr/bin/ncatted debian/nco/usr/bin/ncks debian/nco/usr/bin/ncra debian/nco/usr/bin/ncap2 debian/nco/usr/bin/ncpdq were not linked against libsz.so.2 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/nco/usr/bin/ncwa debian/nco/usr/lib/nco/libnco-4.6.7.so debian/nco/usr/bin/ncbo debian/nco/usr/bin/ncflint debian/nco/usr/bin/ncap debian/nco/usr/bin/ncecat debian/nco/usr/bin/ncrename debian/nco/usr/bin/ncatted debian/nco/usr/bin/ncks debian/nco/usr/bin/ncra debian/nco/usr/bin/ncap2 debian/nco/usr/bin/ncpdq were not linked against libgslcblas.so.0 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/nco/usr/bin/ncwa debian/nco/usr/lib/nco/libnco-4.6.7.so debian/nco/usr/bin/ncbo debian/nco/usr/bin/ncflint debian/nco/usr/bin/ncap debian/nco/usr/bin/ncecat debian/nco/usr/bin/ncrename debian/nco/usr/bin/ncatted debian/nco/usr/bin/ncks debian/nco/usr/bin/ncra debian/nco/usr/bin/ncap2 debian/nco/usr/bin/ncpdq were not linked against libhdf5_serial.so.100 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/nco/usr/bin/ncwa debian/nco/usr/lib/nco/libnco-4.6.7.so debian/nco/usr/bin/ncbo debian/nco/usr/bin/ncflint debian/nco/usr/bin/ncap debian/nco/usr/bin/ncecat debian/nco/usr/bin/ncrename debian/nco/usr/bin/ncatted debian/nco/usr/bin/ncks debian/nco/usr/bin/ncra debian/nco/usr/bin/ncap2 debian/nco/usr/bin/ncpdq were not linked against libdl.so.2 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/nco/usr/bin/ncwa debian/nco/usr/lib/nco/libnco-4.6.7.so debian/nco/usr/bin/ncbo debian/nco/usr/bin/ncflint debian/nco/usr/bin/ncap debian/nco/usr/bin/ncecat debian/nco/usr/bin/ncrename debian/nco/usr/bin/ncatted debian/nco/usr/bin/ncks debian/nco/usr/bin/ncra debian/nco/usr/bin/ncap2 debian/nco/usr/bin/ncpdq were not linked against libcurl-gnutls.so.4 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/nco/usr/bin/ncwa debian/nco/usr/lib/nco/libnco-4.6.7.so debian/nco/usr/bin/ncbo debian/nco/usr/bin/ncflint debian/nco/usr/bin/ncap debian/nco/usr/bin/ncecat debian/nco/usr/bin/ncrename debian/nco/usr/bin/ncatted debian/nco/usr/bin/ncks debian/nco/usr/bin/ncra debian/nco/usr/bin/ncap2 debian/nco/usr/bin/ncpdq were not linked against libz.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/nco/usr/bin/ncwa debian/nco/usr/lib/nco/libnco-4.6.7.so debian/nco/usr/bin/ncbo debian/nco/usr/bin/ncflint debian/nco/usr/bin/ncap debian/nco/usr/bin/ncecat debian/nco/usr/bin/ncrename debian/nco/usr/bin/ncatted debian/nco/usr/bin/ncks debian/nco/usr/bin/ncra debian/nco/usr/bin/ncap2 debian/nco/usr/bin/ncpdq were not linked against libhdf5_serial_hl.so.100 (they use none of the library's symbols)
dh_installdeb -a -O--buildsystem=autoconf -O--parallel
dh_gencontrol -a -O--buildsystem=autoconf -O--parallel
dh_md5sums -a -O--buildsystem=autoconf -O--parallel
dh_builddeb -a -O--buildsystem=autoconf -O--parallel
dpkg-deb: building package 'nco-dbgsym' in '../nco-dbgsym_4.6.7-2+b1_armhf.deb'.
dpkg-deb: building package 'nco' in '../nco_4.6.7-2+b1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../nco_4.6.7-2+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build nco-4.6.7
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2017-08-17T19:44:29Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
nco_4.6.7-2+b1_armhf.changes:
-----------------------------
Format: 1.8
Date: Sat, 05 Aug 2017 13:33:04 +0200
Source: nco (4.6.7-2)
Binary: nco
Binary-Only: yes
Architecture: armhf
Version: 4.6.7-2+b1
Distribution: buster-staging
Urgency: low
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Description:
nco - Command-line operators to analyze netCDF files
Changes:
nco (4.6.7-2+b1) buster-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
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4cbefa1ca1e9bd73cb76bb26b4d51c544aedf463 1603044 nco_4.6.7-2+b1_armhf.deb
fd3529306ea6161758ec9b8080febd85f0f73a4b 7598 nco_4.6.7-2_armhf.buildinfo
Checksums-Sha256:
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0724fb7060de2e6450eac6f9610277a3141fcac4a78cfddd51246aabfc58c35c 1603044 nco_4.6.7-2+b1_armhf.deb
02b86fe94e015735449e679ce40aa2b89db7648334a13c32d97007ff187df5c8 7598 nco_4.6.7-2_armhf.buildinfo
Files:
c782aadb269c817955d5cda868aa45bd 3658556 debug extra nco-dbgsym_4.6.7-2+b1_armhf.deb
4a2419840b73213e4f13760345fa1fbe 1603044 science optional nco_4.6.7-2+b1_armhf.deb
fb9913ef8ab1eb8b7324d61e68664da3 7598 science optional nco_4.6.7-2_armhf.buildinfo
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
nco-dbgsym_4.6.7-2+b1_armhf.deb
-------------------------------
new debian package, version 2.0.
size 3658556 bytes: control archive=1063 bytes.
807 bytes, 12 lines control
1272 bytes, 12 lines md5sums
Package: nco-dbgsym
Source: nco (4.6.7-2)
Version: 4.6.7-2+b1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian GIS Project <pkg-grass-devel@lists.alioth.debian.org>
Installed-Size: 3945
Depends: nco (= 4.6.7-2+b1)
Section: debug
Priority: extra
Description: Debug symbols for nco
Build-Ids: 0e71a2f8782f8f3d7cb254f6f5f7fecb57d26418 168a9b95b8054c5b511acaad861d7a517c7ab11f 170800f6385cf9c1231529c74cf9f68e3a063abf 288181bc2bdfe4f23ea632b210232128203cbba9 31a923927b50c01d9fa63410c3ef86386eb6b6b7 54fbefccf7d845c87fc147d06f3f78ad1e8a6f10 5872d3fad011b624d49cc7ca7c96e06604a7c99f 743f5016bb5c1fdb0f020b77e3bf2efdc7a9ab80 8ae3418fcb25271ae836f95038cfb72500b0607e bebc7f2caa4762bf863d8ed13f7ada4b4fbc78b1 c7a9e4b7614393d6f7ead1dbd88c53f68576c104 c802c5ff690373a5b0f941f33d4353b14944bf74
drwxr-xr-x root/root 0 2017-08-05 11:33 ./
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/.build-id/0e/
-rw-r--r-- root/root 31852 2017-08-05 11:33 ./usr/lib/debug/.build-id/0e/71a2f8782f8f3d7cb254f6f5f7fecb57d26418.debug
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/.build-id/16/
-rw-r--r-- root/root 80588 2017-08-05 11:33 ./usr/lib/debug/.build-id/16/8a9b95b8054c5b511acaad861d7a517c7ab11f.debug
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/.build-id/17/
-rw-r--r-- root/root 26208 2017-08-05 11:33 ./usr/lib/debug/.build-id/17/0800f6385cf9c1231529c74cf9f68e3a063abf.debug
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/.build-id/28/
-rw-r--r-- root/root 756092 2017-08-05 11:33 ./usr/lib/debug/.build-id/28/8181bc2bdfe4f23ea632b210232128203cbba9.debug
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/.build-id/31/
-rw-r--r-- root/root 38736 2017-08-05 11:33 ./usr/lib/debug/.build-id/31/a923927b50c01d9fa63410c3ef86386eb6b6b7.debug
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/.build-id/54/
-rw-r--r-- root/root 2836668 2017-08-05 11:33 ./usr/lib/debug/.build-id/54/fbefccf7d845c87fc147d06f3f78ad1e8a6f10.debug
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/.build-id/58/
-rw-r--r-- root/root 20192 2017-08-05 11:33 ./usr/lib/debug/.build-id/58/72d3fad011b624d49cc7ca7c96e06604a7c99f.debug
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/.build-id/74/
-rw-r--r-- root/root 32292 2017-08-05 11:33 ./usr/lib/debug/.build-id/74/3f5016bb5c1fdb0f020b77e3bf2efdc7a9ab80.debug
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/.build-id/8a/
-rw-r--r-- root/root 87232 2017-08-05 11:33 ./usr/lib/debug/.build-id/8a/e3418fcb25271ae836f95038cfb72500b0607e.debug
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/.build-id/be/
-rw-r--r-- root/root 24052 2017-08-05 11:33 ./usr/lib/debug/.build-id/be/bc7f2caa4762bf863d8ed13f7ada4b4fbc78b1.debug
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/.build-id/c7/
-rw-r--r-- root/root 46272 2017-08-05 11:33 ./usr/lib/debug/.build-id/c7/a9e4b7614393d6f7ead1dbd88c53f68576c104.debug
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/debug/.build-id/c8/
-rw-r--r-- root/root 31268 2017-08-05 11:33 ./usr/lib/debug/.build-id/c8/02c5ff690373a5b0f941f33d4353b14944bf74.debug
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/share/
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/share/doc/
lrwxrwxrwx root/root 0 2017-08-05 11:33 ./usr/share/doc/nco-dbgsym -> nco
nco_4.6.7-2+b1_armhf.deb
------------------------
new debian package, version 2.0.
size 1603044 bytes: control archive=1968 bytes.
923 bytes, 16 lines control
2691 bytes, 45 lines md5sums
Package: nco
Source: nco (4.6.7-2)
Version: 4.6.7-2+b1
Architecture: armhf
Maintainer: Debian GIS Project <pkg-grass-devel@lists.alioth.debian.org>
Installed-Size: 4977
Depends: libc6 (>= 2.7), libcurl3-gnutls (>= 7.16.2), libgcc1 (>= 1:3.5), libgomp1 (>= 4.9), libgsl23, libgslcblas0, libhdf5-100, libnetcdf11 (>= 4.4.0~rc2), libstdc++6 (>= 5.2), libsz2, libudunits2-0 (>= 2.2.14), zlib1g (>= 1:1.1.4)
Section: science
Priority: optional
Homepage: http://nco.sourceforge.net/
Description: Command-line operators to analyze netCDF files
NCO is a suite of programs known as operators. The operators are stand-alone,
command-line programs executable in a POSIX shell. Operators take one or more
netCDF files as input, perform operations (e.g., averaging, hyperslabbing),
and produce a netCDF output file. NCO was originally designed to manipulate and
analyze climate data, though it works on any netCDF format datasets.
drwxr-xr-x root/root 0 2017-08-05 11:33 ./
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/bin/
-rwxr-xr-x root/root 80660 2017-08-05 11:33 ./usr/bin/ncap
-rwxr-xr-x root/root 1097660 2017-08-05 11:33 ./usr/bin/ncap2
-rwxr-xr-x root/root 14464 2017-08-05 11:33 ./usr/bin/ncatted
-rwxr-xr-x root/root 23664 2017-08-05 11:33 ./usr/bin/ncbo
-rwxr-xr-x root/root 120078 2017-08-05 11:33 ./usr/bin/ncclimo
lrwxrwxrwx root/root 0 2017-08-05 11:33 ./usr/bin/ncdiff -> ncbo
lrwxrwxrwx root/root 0 2017-08-05 11:33 ./usr/bin/ncea -> ncra
-rwxr-xr-x root/root 27888 2017-08-05 11:33 ./usr/bin/ncecat
lrwxrwxrwx root/root 0 2017-08-05 11:33 ./usr/bin/nces -> ncra
-rwxr-xr-x root/root 27824 2017-08-05 11:33 ./usr/bin/ncflint
-rwxr-xr-x root/root 37680 2017-08-05 11:33 ./usr/bin/ncks
-rwxr-xr-x root/root 27920 2017-08-05 11:33 ./usr/bin/ncpdq
-rwxr-xr-x root/root 48656 2017-08-05 11:33 ./usr/bin/ncra
lrwxrwxrwx root/root 0 2017-08-05 11:33 ./usr/bin/ncrcat -> ncra
-rwxr-xr-x root/root 99686 2017-08-05 11:33 ./usr/bin/ncremap
-rwxr-xr-x root/root 22672 2017-08-05 11:33 ./usr/bin/ncrename
-rwxr-xr-x root/root 89588 2017-08-05 11:33 ./usr/bin/ncwa
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/lib/nco/
-rw-r--r-- root/root 825328 2017-08-05 11:33 ./usr/lib/nco/libnco-4.6.7.so
lrwxrwxrwx root/root 0 2017-08-05 11:33 ./usr/lib/nco/libnco.so -> libnco-4.6.7.so
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/share/
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/share/doc-base/
-rw-r--r-- root/root 479 2017-01-03 07:00 ./usr/share/doc-base/nco
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/share/doc/
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/share/doc/nco/
-rw-r--r-- root/root 217 2017-08-05 11:33 ./usr/share/doc/nco/changelog.Debian.armhf.gz
-rw-r--r-- root/root 7078 2017-08-05 11:33 ./usr/share/doc/nco/changelog.Debian.gz
-rw-r--r-- root/root 168706 2017-05-26 19:01 ./usr/share/doc/nco/changelog.gz
-rw-r--r-- root/root 10676 2017-02-08 06:29 ./usr/share/doc/nco/copyright
-rw-r--r-- root/root 1901744 2017-08-05 11:33 ./usr/share/doc/nco/nco.html
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/share/doc/nco/xmp/
-rw-r--r-- root/root 24016 2017-05-26 19:01 ./usr/share/doc/nco/xmp/fgr1.png
-rw-r--r-- root/root 25561 2017-08-05 11:33 ./usr/share/doc/nco/xmp/fgr2.png
-rw-r--r-- root/root 10945 2017-08-05 11:33 ./usr/share/doc/nco/xmp/fgr3.png
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/share/info/
-rw-r--r-- root/root 105590 2017-08-05 11:33 ./usr/share/info/nco.info-1.gz
-rw-r--r-- root/root 99093 2017-08-05 11:33 ./usr/share/info/nco.info-2.gz
-rw-r--r-- root/root 78153 2017-08-05 11:33 ./usr/share/info/nco.info-3.gz
-rw-r--r-- root/root 30538 2017-08-05 11:33 ./usr/share/info/nco.info-4.gz
-rw-r--r-- root/root 3788 2017-08-05 11:33 ./usr/share/info/nco.info.gz
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/share/lintian/
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 102 2017-08-05 11:33 ./usr/share/lintian/overrides/nco
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/share/man/
drwxr-xr-x root/root 0 2017-08-05 11:33 ./usr/share/man/man1/
-rw-r--r-- root/root 1787 2017-08-05 11:33 ./usr/share/man/man1/ncap.1.gz
-rw-r--r-- root/root 1808 2017-08-05 11:33 ./usr/share/man/man1/ncap2.1.gz
-rw-r--r-- root/root 4316 2017-08-05 11:33 ./usr/share/man/man1/ncatted.1.gz
-rw-r--r-- root/root 3338 2017-08-05 11:33 ./usr/share/man/man1/ncbo.1.gz
-rw-r--r-- root/root 1336 2017-08-05 11:33 ./usr/share/man/man1/ncclimo.1.gz
-rw-r--r-- root/root 2212 2017-08-05 11:33 ./usr/share/man/man1/ncecat.1.gz
-rw-r--r-- root/root 2510 2017-08-05 11:33 ./usr/share/man/man1/nces.1.gz
-rw-r--r-- root/root 2518 2017-08-05 11:33 ./usr/share/man/man1/ncflint.1.gz
-rw-r--r-- root/root 5572 2017-08-05 11:33 ./usr/share/man/man1/ncks.1.gz
-rw-r--r-- root/root 2007 2017-08-05 11:33 ./usr/share/man/man1/nco.1.gz
-rw-r--r-- root/root 1970 2017-08-05 11:33 ./usr/share/man/man1/ncpdq.1.gz
-rw-r--r-- root/root 2309 2017-08-05 11:33 ./usr/share/man/man1/ncra.1.gz
-rw-r--r-- root/root 2514 2017-08-05 11:33 ./usr/share/man/man1/ncrcat.1.gz
-rw-r--r-- root/root 1381 2017-08-05 11:33 ./usr/share/man/man1/ncremap.1.gz
-rw-r--r-- root/root 2445 2017-08-05 11:33 ./usr/share/man/man1/ncrename.1.gz
-rw-r--r-- root/root 2788 2017-08-05 11:33 ./usr/share/man/man1/ncwa.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 86584
Build-Time: 299
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 420
Job: nco_4.6.7-2
Machine Architecture: armhf
Package: nco
Package-Time: 736
Source-Version: 4.6.7-2
Space: 86584
Status: successful
Version: 4.6.7-2+b1
--------------------------------------------------------------------------------
Finished at 2017-08-17T19:44:29Z
Build needed 00:12:16, 86584k disk space