ncbi-blast+ →
2.7.1-2 →
armhf → 2018-12-17 03:41:51
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-04
+==============================================================================+
| ncbi-blast+ 2.7.1-2 (armhf) Sun, 16 Dec 2018 15:58:43 +0000 |
+==============================================================================+
Package: ncbi-blast+
Version: 2.7.1-2
Source Version: 2.7.1-2
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-e57e4b82-3294-45f6-9006-fcf138d85ba8' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.3 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [13.0 MB]
Fetched 24.3 MB in 28s (863 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'ncbi-blast+' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/ncbi-blastplus.git
Please use:
git clone https://salsa.debian.org/med-team/ncbi-blastplus.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 23.7 MB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main ncbi-blast+ 2.7.1-2 (dsc) [2304 B]
Get:2 http://172.17.0.1/private buster-staging/main ncbi-blast+ 2.7.1-2 (tar) [23.7 MB]
Get:3 http://172.17.0.1/private buster-staging/main ncbi-blast+ 2.7.1-2 (diff) [29.4 kB]
Fetched 23.7 MB in 2s (10.9 MB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/ncbi-blast+-v4XaBb' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/gpg/pubring.kbx' created
gpg: /build/ncbi-blast+-v4XaBb/resolver-W0f4oO/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/apt_archive ./ InRelease
Get:2 copy:/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/apt_archive ./ Release [957 B]
Get:3 copy:/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/apt_archive ./ Sources [349 B]
Get:5 copy:/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (3096 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session krb5-locales libexpat1
libgpg-error-l10n libnss-systemd libpam-systemd libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 7 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
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(Reading database ... 14015 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: autotools-dev, debhelper (>= 9), libboost-test-dev, libbz2-dev, libc-dev-bin, libgnutls28-dev, libmbedtls-dev, libpcre3-dev, time, zlib1g-dev
Filtered Build-Depends: autotools-dev, debhelper (>= 9), libboost-test-dev, libbz2-dev, libc-dev-bin, libgnutls28-dev, libmbedtls-dev, libpcre3-dev, time, zlib1g-dev
dpkg-deb: building package 'sbuild-build-depends-ncbi-blast+-dummy' in '/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/apt_archive/sbuild-build-depends-ncbi-blast+-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-ncbi-blast+-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/apt_archive ./ InRelease
Get:2 copy:/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/apt_archive ./ Release [963 B]
Get:3 copy:/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/apt_archive ./ Sources [551 B]
Get:5 copy:/build/ncbi-blast+-v4XaBb/resolver-W0f4oO/apt_archive ./ Packages [634 B]
Fetched 2518 B in 1s (3391 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install ncbi-blast+ build dependencies (apt-based resolver)
-----------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session krb5-locales libexpat1
libgpg-error-l10n libnss-systemd libpam-systemd libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libboost-chrono1.67.0
libboost-system1.67.0 libboost-test-dev libboost-test1.67-dev
libboost-test1.67.0 libboost-timer1.67.0 libboost1.67-dev libbsd0 libbz2-dev
libcroco3 libelf1 libevent-2.1-6 libfile-stripnondeterminism-perl
libglib2.0-0 libgmp-dev libgmp10 libgmpxx4ldbl libgnutls-dane0
libgnutls-openssl27 libgnutls28-dev libgnutlsxx28 libhogweed4 libicu63
libidn2-0-dev libidn2-dev libmagic-mgc libmagic1 libmbedcrypto3
libmbedtls-dev libmbedtls12 libmbedx509-0 libnettle6 libp11-kit-dev
libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libsigsegv2
libtasn1-6-dev libtool libunbound8 libxml2 m4 man-db nettle-dev po-debconf
time zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
libboost1.67-doc libboost-atomic1.67-dev libboost-chrono1.67-dev
libboost-container1.67-dev libboost-context1.67-dev
libboost-coroutine1.67-dev libboost-date-time1.67-dev
libboost-exception1.67-dev libboost-fiber1.67-dev
libboost-filesystem1.67-dev libboost-graph1.67-dev
libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev
libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev
libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev
libboost-program-options1.67-dev libboost-python1.67-dev
libboost-random1.67-dev libboost-regex1.67-dev
libboost-serialization1.67-dev libboost-signals1.67-dev
libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-thread1.67-dev
libboost-timer1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev
libboost1.67-tools-dev libmpfrc++-dev libntl-dev gmp-doc libgmp10-doc
libmpfr-dev dns-root-data gnutls-doc gnutls-bin libmbedtls-doc libtool-doc
gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs libtasn1-doc libltdl-dev
libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libboost-chrono1.67.0
libboost-system1.67.0 libboost-test-dev libboost-test1.67-dev
libboost-test1.67.0 libboost-timer1.67.0 libboost1.67-dev libbsd0 libbz2-dev
libcroco3 libelf1 libevent-2.1-6 libfile-stripnondeterminism-perl
libglib2.0-0 libgmp-dev libgmpxx4ldbl libgnutls-dane0 libgnutls-openssl27
libgnutls28-dev libgnutlsxx28 libicu63 libidn2-0-dev libidn2-dev
libmagic-mgc libmagic1 libmbedcrypto3 libmbedtls-dev libmbedtls12
libmbedx509-0 libp11-kit-dev libpcre16-3 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libsigsegv2 libtasn1-6-dev libtool libunbound8
libxml2 m4 man-db nettle-dev po-debconf
sbuild-build-depends-ncbi-blast+-dummy time zlib1g-dev
The following packages will be upgraded:
libgmp10 libhogweed4 libnettle6
3 upgraded, 62 newly installed, 0 to remove and 4 not upgraded.
Need to get 34.5 MB/34.6 MB of archives.
After this operation, 227 MB of additional disk space will be used.
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Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-2 [25.1 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.4-3 [1160 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libgmp10 armhf 2:6.1.2+dfsg-4 [196 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libnettle6 armhf 3.4.1~rc1-1 [223 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf libhogweed4 armhf 3.4.1~rc1-1 [130 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.34-2 [239 kB]
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Get:12 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.34-2 [65.0 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libevent-2.1-6 armhf 2.1.8-stable-4 [156 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libgnutls-openssl27 armhf 3.5.19-1+b1 [205 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf time armhf 1.7-25.1 [30.8 kB]
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Get:18 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
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Get:33 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.5.3 [1002 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libboost-system1.67.0 armhf 1.67.0-11 [228 kB]
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Get:46 http://172.17.0.1/private buster-staging/main armhf libgmp-dev armhf 2:6.1.2+dfsg-4 [570 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libunbound8 armhf 1.8.1-1 [395 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libgnutls-dane0 armhf 3.5.19-1+b1 [205 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libgnutlsxx28 armhf 3.5.19-1+b1 [11.7 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf nettle-dev armhf 3.4.1~rc1-1 [1079 kB]
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Get:53 http://172.17.0.1/private buster-staging/main armhf libp11-kit-dev armhf 0.23.14-2 [192 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libidn2-dev armhf 2.0.5-1 [76.1 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libidn2-0-dev armhf 2.0.5-1 [19.6 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libgnutls28-dev armhf 3.5.19-1+b1 [766 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libmbedcrypto3 armhf 2.14.1-2 [185 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libmbedx509-0 armhf 2.14.1-2 [85.8 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libmbedtls12 armhf 2.14.1-2 [121 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libmbedtls-dev armhf 2.14.1-2 [441 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libpcre16-3 armhf 2:8.39-11+rpi1 [234 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libpcre32-3 armhf 2:8.39-11+rpi1 [227 kB]
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Get:64 http://172.17.0.1/private buster-staging/main armhf libpcre3-dev armhf 2:8.39-11+rpi1 [565 kB]
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W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.4-armmp armhf (armv7l)
Toolchain package versions: binutils_2.31.1-10+rpi1 dpkg-dev_1.19.2 g++-8_8.2.0-9+rpi1 gcc-8_8.2.0-9+rpi1 libc6-dev_2.27-8+rpi1 libstdc++-8-dev_8.2.0-9+rpi1 libstdc++6_8.2.0-9+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 apt_1.8.0~alpha2 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-3.1 binutils_2.31.1-10+rpi1 binutils-arm-linux-gnueabihf_2.31.1-10+rpi1 binutils-common_2.31.1-10+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.32.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20170717 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-9+rpi1 dash_0.5.10.2-1 dbus_1.12.10-1 dbus-user-session_1.12.10-1 debconf_1.5.69 debhelper_11.5.3 debianutils_4.8.6 dh-autoreconf_19 dh-strip-nondeterminism_1.0.0-1 diffutils_1:3.6-1 dirmngr_2.2.11-1 dmsetup_2:1.02.145-4.1+b5 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-2 e2fslibs_1.44.4-2 e2fsprogs_1.44.4-2 fakeroot_1.23-1 fdisk_2.32.1-0.1 file_1:5.34-2 findutils_4.6.0+git+20181018-1 g++_4:8.2.0-2+rpi1 g++-8_8.2.0-9+rpi1 gcc_4:8.2.0-2+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-6-base_6.5.0-1+rpi1 gcc-8_8.2.0-9+rpi1 gcc-8-base_8.2.0-9+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gnupg_2.2.11-1 gnupg-l10n_2.2.11-1 gnupg-utils_2.2.11-1 gpg_2.2.11-1 gpg-agent_2.2.11-1 gpg-wks-client_2.2.11-1 gpg-wks-server_2.2.11-1 gpgconf_2.2.11-1 gpgsm_2.2.11-1 gpgv_2.2.11-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.9-2.1 hostname_3.21 inetutils-ping_2:1.9.4-5 init-system-helpers_1.56 initramfs-tools_0.132 initramfs-tools-core_0.132 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-14+rpi1 kmod_25-2 krb5-locales_1.16.1-1 libacl1_2.2.52-3 libapparmor1_2.13.1-3+b1 libapt-pkg5.0_1.8.0~alpha2 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.1 libasan5_8.2.0-9+rpi1 libassuan0_2.5.1-2 libatomic1_8.2.0-9+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libbinutils_2.31.1-10+rpi1 libblkid1_2.32.1-0.1 libboost-chrono1.67.0_1.67.0-11 libboost-system1.67.0_1.67.0-11 libboost-test-dev_1.67.0.1+b1 libboost-test1.67-dev_1.67.0-11 libboost-test1.67.0_1.67.0-11 libboost-timer1.67.0_1.67.0-11 libboost1.67-dev_1.67.0-11 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libbz2-dev_1.0.6-9 libc-bin_2.27-8+rpi1 libc-dev-bin_2.27-8+rpi1 libc6_2.27-8+rpi1 libc6-dev_2.27-8+rpi1 libcap-ng0_0.7.9-1 libcap2_1:2.25-1.2 libcc1-0_8.2.0-9+rpi1 libcom-err2_1.44.4-2 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.5-2 libcryptsetup4_2:1.7.5-1 libdb5.3_5.3.28+dfsg1-0.2 libdbus-1-3_1.12.10-1 libdebconfclient0_0.245 libdevmapper1.02.1_2:1.02.145-4.1+b5 libdpkg-perl_1.19.2 libdrm-common_2.4.95-1+rpi1 libdrm2_2.4.95-1+rpi1 libelf1_0.170-0.5 libevent-2.1-6_2.1.8-stable-4 libexpat1_2.2.6-1 libext2fs2_1.44.4-2 libfakeroot_1.23-1 libfdisk1_2.32.1-0.1 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.0.0-1 libgcc-8-dev_8.2.0-9+rpi1 libgcc1_1:8.2.0-9+rpi1 libgcrypt20_1.8.4-3 libgdbm-compat4_1.18.1-2 libgdbm3_1.8.3-14 libgdbm6_1.18.1-2 libglib2.0-0_2.58.1-2 libgmp-dev_2:6.1.2+dfsg-4 libgmp10_2:6.1.2+dfsg-4 libgmpxx4ldbl_2:6.1.2+dfsg-4 libgnutls-dane0_3.5.19-1+b1 libgnutls-openssl27_3.5.19-1+b1 libgnutls28-dev_3.5.19-1+b1 libgnutls30_3.5.19-1+b1 libgnutlsxx28_3.5.19-1+b1 libgomp1_8.2.0-9+rpi1 libgpg-error-l10n_1.32-3 libgpg-error0_1.32-3 libgssapi-krb5-2_1.16.1-1 libhogweed4_3.4.1~rc1-1 libicu63_63.1-5 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libidn2-0-dev_2.0.5-1 libidn2-dev_2.0.5-1 libip4tc0_1.8.2-2 libisl19_0.20-2 libjson-c3_0.12.1-1.3 libk5crypto3_1.16.1-1 libkeyutils1_1.5.9-9.3 libklibc_2.0.4-14+rpi1 libkmod2_25-2 libkrb5-3_1.16.1-1 libkrb5support0_1.16.1-1 libksba8_1.3.5-2 libldap-2.4-2_2.4.46+dfsg-5+rpi1+b1 libldap-common_2.4.46+dfsg-5+rpi1 liblz4-1_1.8.2-1+rpi1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmbedcrypto3_2.14.1-2 libmbedtls-dev_2.14.1-2 libmbedtls12_2.14.1-2 libmbedx509-0_2.14.1-2 libmount1_2.32.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libncurses5_6.1+20181013-1 libncurses6_6.1+20181013-1 libncursesw5_6.1+20181013-1 libncursesw6_6.1+20181013-1 libnettle6_3.4.1~rc1-1 libnpth0_1.6-1 libnss-systemd_239-13+rpi1 libp11-kit-dev_0.23.14-2 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-3.8 libpam-modules-bin_1.1.8-3.8 libpam-runtime_1.1.8-3.8 libpam-systemd_239-13+rpi1 libpam0g_1.1.8-3.8 libpcre16-3_2:8.39-11+rpi1 libpcre3_2:8.39-11+rpi1 libpcre3-dev_2:8.39-11+rpi1 libpcre32-3_2:8.39-11+rpi1 libpcrecpp0v5_2:8.39-11+rpi1 libperl5.28_5.28.1-1 libpipeline1_1.5.0-2 libplymouth4_0.9.4-1 libpng16-16_1.6.34-2+rpi1 libprocps7_2:3.3.15-2 libreadline7_7.0-5 libsasl2-2_2.1.27~rc8-1 libsasl2-modules-db_2.1.27~rc8-1 libseccomp2_2.3.3-3 libselinux1_2.8-1 libsemanage-common_2.8-1 libsemanage1_2.8-1 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.32.1-0.1 libsqlite3-0_3.25.3-2 libss2_1.44.4-2 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-9+rpi1 libstdc++6_8.2.0-9+rpi1 libsystemd0_239-13+rpi1 libtasn1-6_4.13-3 libtasn1-6-dev_4.13-3 libtinfo5_6.1+20181013-1 libtinfo6_6.1+20181013-1 libtool_2.4.6-6 libubsan1_8.2.0-9+rpi1 libudev1_239-13+rpi1 libunbound8_1.8.1-1 libunistring2_0.9.10-1 libuuid1_2.32.1-0.1 libxml2_2.9.4+dfsg1-7+b1 libzstd1_1.3.5+dfsg-1+rpi1 linux-base_4.5 linux-libc-dev_4.18.20-2+rpi1 login_1:4.5-1.1 lsb-base_9.20170808+rpi1 m4_1.4.18-2 make_4.2.1-1.2 makedev_2.3.1-94 man-db_2.8.4-3 mawk_1.3.3-17 mount_2.32.1-0.1 multiarch-support_2.27-8+rpi1 nano_3.2-1 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 netbase_5.5 nettle-dev_3.4.1~rc1-1 openssl_1.1.1a-1 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-1 perl-base_5.28.1-1 perl-modules-5.28_5.28.1-1 pinentry-curses_1.1.0-1 plymouth_0.9.4-1 po-debconf_1.0.21 procps_2:3.3.15-2 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-ncbi-blast+-dummy_0.invalid.0 sed_4.5-2 sensible-utils_0.0.12 systemd_239-13+rpi1 systemd-sysv_239-13+rpi1 sysvinit-utils_2.92~beta-2 tar_1.30+dfsg-3+rpi1 time_1.7-25.1 tzdata_2018g-1 udev_239-13+rpi1 util-linux_2.32.1-0.1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Dec 13 03:27:22 2018 UTC
gpgv: using RSA key 7C3AB9CFD230BD30DD009C591E7091B1F14A64A2
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./ncbi-blast+_2.7.1-2.dsc
dpkg-source: info: extracting ncbi-blast+ in /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1
dpkg-source: info: unpacking ncbi-blast+_2.7.1.orig.tar.gz
dpkg-source: info: unpacking ncbi-blast+_2.7.1-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying enable_clean_after_failed_compile
dpkg-source: info: applying hurd_fixes
dpkg-source: info: applying legacy_rename_rpsblast
dpkg-source: info: applying fix_lib_deps
dpkg-source: info: applying no_multiarch_rpath
dpkg-source: info: applying use_pie_for_apps
dpkg-source: info: applying skip_services_unit_test
dpkg-source: info: applying fix_configure
dpkg-source: info: applying support_x32
dpkg-source: info: applying suppress_gnutls_version_check
dpkg-source: info: applying optionally_keep_sequence
dpkg-source: info: applying fix_unit_tests
dpkg-source: info: applying support_boost_1_67
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-e57e4b82-3294-45f6-9006-fcf138d85ba8
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package ncbi-blast+
dpkg-buildpackage: info: source version 2.7.1-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
#dh clean -Dc++ --with autotools_dev
dh clean -Dc++
dh_testdir -O-Dc\+\+
dh_auto_clean -O-Dc\+\+
debian/rules override_dh_clean
make[1]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1'
cp c++/configure.orig configure.orig.save
dh_clean
#Tricky - for each module directory there may be several module files
#or there may be none but then there is still a module named after the
#directory. Clean everything!
for x in c++/src/objects/* ; do \
(cd "$x" && ( \
mods="`echo *.module`" ; \
[ "${mods#*\*}" = "$mods" ] || mods="`basename $x`" ; \
for mod in $mods ; do \
../../../BUILD/build/new_module.sh $mod purge_sources ; \
done ) ; \
) ; \
done
/bin/sh: 2: cd: can't cd to c++/src/objects/CMakeLists.txt
/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.in
/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.sources
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.cmd
/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.sh
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
make[1]: [debian/rules:108: override_dh_clean] Error 127 (ignored)
rm -rf c++/compilers/dll c++/config.log c++/Makefile
rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module
find -name check_exec.pid -delete
rm -rf c++/BUILD
mv configure.orig.save c++/configure.orig
make[1]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1'
debian/rules build-arch
#dh build-arch -Dc++ --with autotools_dev
dh build-arch -Dc++
dh_testdir -a -O-Dc\+\+
dh_update_autotools_config -a -O-Dc\+\+
debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1'
cd c++ && LD_LIBRARY_PATH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib${LD_LIBRARY_PATH+:$LD_LIBRARY_PATH} \
CONFIG_SHELL=/bin/bash ./configure --with-dll --with-mt --without-autodep --without-makefile-auto-update --with-flat-makefile --without-caution --without-dbapi --without-lzo --with-runpath=/usr/lib/ncbi-blast+ --with-build-root=BUILD --without-debug --without-downloaded-vdb --with-mbedtls --with-symbols CFLAGS_FOR_BUILD="-g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIE" LDFLAGS_FOR_BUILD="-specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed" \
|| (tail -v -n +0 config.log BUILD/status/config.log; exit 1)
configure: loading site script ./src/build-system/config.site
configure: creating cache config.cache
configure: WARNING: --with(out)-dbapi is deprecated
configure: WARNING: please simply pass an appropriate project list
checking TeamCity build number... none
checking Subversion revision... unknown
checking NCBI stable components' version... unknown
checking build system type... armv7l-unknown-linux-gnueabihf
checking host system type... armv7l-unknown-linux-gnueabihf
checking for a BSD-compatible install... /usr/bin/install -c
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for gcc... gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
adjusted C compiler: /usr/bin/gcc
adjusted C++ compiler: /usr/bin/g++
checking whether /usr/bin/gcc has an option to export all symbols... -Wl,-export-dynamic
checking whether /usr/bin/gcc supports -Wl,--{en,dis}able-new-dtags... yes
checking whether /usr/bin/gcc has an option to discard unneeded shared libraries... -Wl,--as-needed
checking whether /usr/bin/gcc has an option to link in whole static archives... -Wl,--whole-archive
checking whether _LIBCPP_VERSION is declared... no
checking how to enable C++ '11 features in /usr/bin/g++ ... -std=gnu++11
checking how to enable C '11 or at least '99 features in /usr/bin/gcc ... -std=gnu11 -fgnu89-inline
checking for dpkg-architecture... /usr/bin/dpkg-architecture
checking for gawk... no
checking for mawk... mawk
checking for GNU make... /usr/bin/make
checking for /usr/bin/make... /usr/bin/make
checking whether ln -s works... yes
checking for ranlib... ranlib
checking for ar... ar cr
checking ranlib's effectiveness... neutral
checking for strip... strip
checking whether strip loses runtime type information... no
checking for ccache... no
checking for tail... /usr/bin/tail
checking whether /usr/bin/tail accepts modern syntax (-n N)... yes
checking for basename... /usr/bin/basename
checking for sed... /bin/sed
checking for touch... /bin/touch
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking how to run /bin/grep -E quietly... /bin/grep -E -q
checking for valgrind... no
checking for ldd... /usr/bin/ldd
checking whether /usr/bin/ldd accepts -r... yes
checking for uuidgen... no
checking for cd_reporter... no
checking how to run the C++ preprocessor... /usr/bin/g++ -std=gnu++11 -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for size_t... yes
checking for size_t... (cached) yes
checking size of size_t... 4
checking for amq... no
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -Wl,--no-allow-shlib-undefined... yes
checking how to run the C preprocessor... gcc -E
checking whether cross-directory hard links work... yes
checking iostream usability... yes
checking iostream presence... yes
checking for iostream... yes
checking iostream.h usability... no
checking iostream.h presence... no
checking for iostream.h... no
checking fstream usability... yes
checking fstream presence... yes
checking for fstream... yes
checking fstream.h usability... no
checking fstream.h presence... no
checking for fstream.h... no
checking strstream usability... yes
checking strstream presence... yes
checking for strstream... yes
checking strstream.h usability... no
checking strstream.h presence... no
checking for strstream.h... no
checking strstrea.h usability... no
checking strstrea.h presence... no
checking for strstrea.h... no
checking for inttypes.h... (cached) yes
checking limits usability... yes
checking limits presence... yes
checking for limits... yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking for unistd.h... (cached) yes
checking windows.h usability... no
checking windows.h presence... no
checking for windows.h... no
checking for wstring... yes
checking for socklen_t... yes
checking atomic.h usability... no
checking atomic.h presence... no
checking for atomic.h... no
checking cpuid.h usability... no
checking cpuid.h presence... no
checking for cpuid.h... no
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
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checking ieeefp.h usability... no
checking ieeefp.h presence... no
checking for ieeefp.h... no
checking poll.h usability... yes
checking poll.h presence... yes
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checking sys/epoll.h usability... yes
checking sys/epoll.h presence... yes
checking for sys/epoll.h... yes
checking sys/mount.h usability... yes
checking sys/mount.h presence... yes
checking for sys/mount.h... yes
checking sys/sockio.h usability... no
checking sys/sockio.h presence... no
checking for sys/sockio.h... no
checking sys/statvfs.h usability... yes
checking sys/statvfs.h presence... yes
checking for sys/statvfs.h... yes
checking sys/sysinfo.h usability... yes
checking sys/sysinfo.h presence... yes
checking for sys/sysinfo.h... yes
checking sys/vfs.h usability... yes
checking sys/vfs.h presence... yes
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checking x86intrin.h usability... no
checking x86intrin.h presence... no
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checking arpa/inet.h usability... yes
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checking errno.h usability... yes
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checking netinet/tcp.h usability... yes
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checking paths.h usability... yes
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checking signal.h usability... yes
checking signal.h presence... yes
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checking sys/ioctl.h usability... yes
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config.status: creating /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/Makefile
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config.status: creating /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers/Makefile
config.status: creating /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/Makefile
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config.status: creating /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker/Makefile
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config.status: creating /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib/Makefile
config.status: creating /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib/Makefile.precompile
config.status: creating /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/./Makefile
config.status: creating /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc/common/ncbi_build_ver.h
config.status: creating /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc/ncbiconf_unix.h
config.status: executing default commands
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib/ncbicfg.c is updated
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc/common/ncbi_build_ver.h is updated
make[2]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/helpers TMPL=run_with_lock -kw all
make[3]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
gcc -c -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIE /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/helpers/run_with_lock.c -o run_with_lock.o
gcc -Wl,-rpath,/usr/lib/ncbi-blast+ -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -fPIE -pie run_with_lock.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lm -lpthread -o run_with_lock
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f run_with_lock /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/run_with_lock
make[3]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
make[2]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
Platform not defined for Linux armv7l -- please fix me
project_tree_builder is not found at /net/snowman/vol/export2/win-coremake/App/Ncbi/cppcore/ptb/UNKNOWN/4.2.1/project_tree_builder
Will build project_tree_builder locally
**********************************************************************
Building project_tree_builder
**********************************************************************
make[2]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[3]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.precompile): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[3] (Makefile.corelib.lib): Nothing to be done for `export-headers'.
/usr/bin/make[3] (Makefile.test_mt.lib): Nothing to be done for `export-headers'.
/usr/bin/make[3] (Makefile.test_boost.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib TMPL=corelib -w all
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_os_unix.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/blob_storage.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/blob_storage.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ddumpable.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ddumpable.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/env_reg.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/env_reg.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/metareg.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/metareg.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::CMetaRegistry::SEntry&}; _Tp = ncbi::CMetaRegistry::SEntry; _Alloc = std::allocator<ncbi::CMetaRegistry::SEntry>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::CMetaRegistry::SEntry>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::CMetaRegistry::SEntry*, std::vector<ncbi::CMetaRegistry::SEntry> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/metareg.cpp:35:
/usr/include/c++/8/bits/stl_vector.h: In member function 'const ncbi::CMetaRegistry::SEntry& ncbi::CMetaRegistry::x_Load(const string&, ncbi::CMetaRegistry::ENameStyle, ncbi::CMetaRegistry::TFlags, ncbi::IRegistry::TFlags, ncbi::IRWRegistry*, const string&, ncbi::CMetaRegistry::ENameStyle, ncbi::CMetaRegistry::SEntry&, const string&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CMetaRegistry::SEntry*, std::vector<ncbi::CMetaRegistry::SEntry> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_config.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_os_unix.cpp -o ncbi_os_unix.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/blob_storage.cpp -o blob_storage.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ddumpable.cpp -o ddumpable.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/env_reg.cpp -o env_reg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/metareg.cpp -o metareg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_config.cpp -o ncbi_config.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MTIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_param.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_process.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_safe_static.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_signal.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_signal.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_stack.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_system.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp: In member function 'void ncbi::CNcbiApplication::x_TryMain(ncbi::EAppDiagStream, const char*, int*, bool*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp:460:20: warning: catching polymorphic type 'class ncbi::CArgHelpException' by value [-Wcatch-value=]
catch (CArgHelpException) {
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp: In member function 'int ncbi::CNcbiApplication::AppMain(int, const char* const*, const char* const*, ncbi::EAppDiagStream, const char*, const string&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp:792:20: warning: catching polymorphic type 'class ncbi::CArgException' by value [-Wcatch-value=]
catch (CArgException) {
^~~~~~~~~~~~~
-D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_param.cpp -o ncbi_param.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_process.cpp -o ncbi_process.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_safe_static.cpp -o ncbi_safe_static.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_signal.cpp -o ncbi_signal.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_stack.cpp -o ncbi_stack.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_system.cpp -o ncbi_system.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp -o ncbiapp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-sIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp: In member function 'bool ncbi::CArgDescriptions::x_CreateArg(const string&, const string&, bool, const string&, unsigned int, ncbi::CArgs&, bool, ncbi::CArgValue**) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:2917:12: warning: catching polymorphic type 'class ncbi::CArgException' by value [-Wcatch-value=]
catch (CArgException) {
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp: In function 'std::__cxx11::string ncbi::s_CArgs_ReadFromConsole(const string&, ncbi::EEchoInput, const char*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:2058:18: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
write( tty, prompt.data(), prompt.length());
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:2087:18: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
write( tty, thx.data(), thx.length());
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiatomic.cpp:45:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidbg.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_process.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::sx_ThreadDataTlsCleanup(ncbi::CDiagContextThreadData*, void*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:854:67: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
value->GetProperties(CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:1810:34: note: declared here
NCBI_DEPRECATED TProperties* GetProperties(EGetProperties flag);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::SetProperty(const string&, const string&, ncbi::CDiagContext::EPropertyMode)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1776:16: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
catch (CException) {
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1824:49: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Create); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'std::__cxx11::string ncbi::CDiagContext::GetProperty(const string&, ncbi::CDiagContext::EPropertyMode) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1887:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::DeleteProperty(const string&, ncbi::CDiagContext::EPropertyMode)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1912:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::PrintProperties()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1944:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In function 'bool ncbi::s_GetLogConfigBool(ncbi::CTempString, bool, ncbi::CNcbiRegistry*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:3103:16: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::SetupDiag(ncbi::EAppDiagStream, ncbi::CNcbiRegistry*, ncbi::EDiagCollectMessages, const char*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:3244:48: warning: 'virtual bool ncbi::CNcbiApplication::SetupDiag_AppSpecific()' is deprecated [-Wdeprecated-declarations]
app->SetupDiag_AppSpecific(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:48,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:362:34: note: declared here
NCBI_DEPRECATED virtual bool SetupDiag_AppSpecific(void);
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'bool ncbi::SDiagMessage::x_ParseExtraArgs(const string&, size_t)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4235:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4247:16: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'bool ncbi::SDiagMessage::ParseMessage(const string&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4334:20: warning: catching polymorphic type 'class ncbi::CTimeException' by value [-Wcatch-value=]
catch (CTimeException) {
^~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4520:28: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4606:12: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
catch (CException) {
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'virtual void ncbi::CFileHandleDiagHandler::Reopen(ncbi::CDiagHandler::TReopenFlags)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:5862:16: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
catch (CException) {
^~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_process.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In instantiation of 'static void ncbi::CStringPairs<TContainer>::Parse(ncbi::CStringPairs<TContainer>::TStrPairs&, ncbi::CTempString, ncbi::CTempString, ncbi::CTempString, ncbi::IStringDecoder*, EOwnership, ncbi::NStr::EMergeDelims) [with TContainer = std::__cxx11::list<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> > >; ncbi::CStringPairs<TContainer>::TStrPairs = std::__cxx11::list<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> > >; EOwnership = ENcbiOwnership]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3949:9: required from 'void ncbi::CStringPairs<TContainer>::Parse(ncbi::CTempString, ncbi::NStr::EMergeDelims) [with TContainer = std::__cxx11::list<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> > >]'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4233:52: required from here
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3989:17: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag_p.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag_p.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidll.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidll.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
trong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp -o ncbiargs.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiatomic.cpp -o ncbiatomic.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include ncbicfg.c -o ncbicfg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidbg.cpp -o ncbidbg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp -o ncbidiag.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag_p.cpp -o ncbidiag_p.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbidll.cpp -o ncbidll.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbienv.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_process.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexec.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexec.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexpt.cpp:41:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbifile.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimempool.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbimempool.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbimtx.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiobj.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
aBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbienv.cpp -o ncbienv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexec.cpp -o ncbiexec.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexpt.cpp -o ncbiexpt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbifile.cpp -o ncbifile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbimempool.cpp -o ncbimempool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbimtx.cpp -o ncbimtx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbiobj.cpp -o ncbiobj.o
/In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbireg.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbistr.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbistre.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp:45:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp: In static member function 'static bool ncbi::CThread::IsMain()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp:516:9: warning: variable 'id' set but not used [-Wunused-but-set-variable]
TID id = sx_ThreadId;
^~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp: In member function 'bool ncbi::CTime::x_Init(const string&, const ncbi::CTimeFormat&, ncbi::CTime::EErrAction)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp:696:20: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp:715:20: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/obj_store.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/obj_store.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbireg.cpp -o ncbireg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbistr.cpp -o ncbistr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbistre.cpp -o ncbistre.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp -o ncbithr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp -o ncbitime.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/obj_store.cpp -o obj_store.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-bIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager_store.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager_store.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/stream_utils.cpp:42:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/syslog.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/syslog.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp:516:12: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
: date(__DATE__ " " __TIME__)
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp:516:25: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
: date(__DATE__ " " __TIME__)
^~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/request_ctx.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/request_ctx.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In instantiation of 'static void ncbi::CStringPairs<TContainer>::Parse(ncbi::CStringPairs<TContainer>::TStrPairs&, ncbi::CTempString, ncbi::CTempString, ncbi::CTempString, ncbi::IStringDecoder*, EOwnership, ncbi::NStr::EMergeDelims) [with TContainer = std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char>, ncbi::PNocase_Generic<std::__cxx11::basic_string<char> > >; ncbi::CStringPairs<TContainer>::TStrPairs = std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char>, ncbi::PNocase_Generic<std::__cxx11::basic_string<char> > >; EOwnership = ENcbiOwnership]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/request_ctx.cpp:725:43: required from here
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3989:17: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~
last+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager.cpp -o plugin_manager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager_store.cpp -o plugin_manager_store.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/rwstreambuf.cpp -o rwstreambuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/stream_utils.cpp -o stream_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/syslog.cpp -o syslog.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp -o version.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/request_ctx.cpp -o request_ctx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/request_control.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/expr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/expr.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/resource_info.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In instantiation of 'static void ncbi::CStringPairs<TContainer>::Parse(ncbi::CStringPairs<TContainer>::TStrPairs&, ncbi::CTempString, ncbi::CTempString, ncbi::CTempString, ncbi::IStringDecoder*, EOwnership, ncbi::NStr::EMergeDelims) [with TContainer = std::multimap<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >; ncbi::CStringPairs<TContainer>::TStrPairs = std::multimap<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >; EOwnership = ENcbiOwnership]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3949:9: required from 'void ncbi::CStringPairs<TContainer>::Parse(ncbi::CTempString, ncbi::NStr::EMergeDelims) [with TContainer = std::multimap<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >]'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/resource_info.cpp:326:43: required from here
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3989:17: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/interprocess_lock.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_autoinit.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/perf_log.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/perf_log.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/request_control.cpp -o request_control.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/expr.cpp -o expr.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_strings.c -o ncbi_strings.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/resource_info.cpp -o resource_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/interprocess_lock.cpp -o interprocess_lock.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_autoinit.cpp -o ncbi_autoinit.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/perf_log.cpp -o perf_log.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/nIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_toolkit.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbierror.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_url.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_url.cpp: In member function 'void ncbi::CUrl::SetUrl(const string&, const ncbi::IUrlEncoder*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_url.cpp:460:20: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_url.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_cookies.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_cookies.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_cookies.cpp: In member function 'bool ncbi::CHttpCookie::Validate() const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_cookies.cpp:327:12: warning: catching polymorphic type 'class ncbi::CHttpCookieException' by value [-Wcatch-value=]
catch (CHttpCookieException) {
^~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_message.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_message.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_toolkit.cpp -o ncbi_toolkit.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbierror.cpp -o ncbierror.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_url.cpp -o ncbi_url.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_cookies.cpp -o ncbi_cookies.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/guard.cpp -o guard.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_message.cpp -o ncbi_message.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/request_status.cpp -o request_status.o
/bin/rm -f libxncbi.so .libxncbi.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxncbi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbi_os_unix.o blob_storage.o ddumpable.o env_reg.o metareg.o ncbi_config.o ncbi_param.o ncbi_process.o ncbi_safe_static.o ncbi_signal.o ncbi_stack.o ncbi_system.o ncbiapp.o ncbiargs.o ncbiatomic.o ncbicfg.o ncbidbg.o ncbidiag.o ncbidiag_p.o ncbidll.o ncbienv.o ncbiexec.o ncbiexpt.o ncbifile.o ncbimempool.o ncbimtx.o ncbiobj.o ncbireg.o ncbistr.o ncbistre.o ncbithr.o ncbitime.o obj_store.o plugin_manager.o plugin_manager_store.o rwstreambuf.o stream_utils.o syslog.o version.o request_ctx.o request_control.o expr.o ncbi_strings.o resource_info.o interprocess_lock.o ncbi_autoinit.o perf_log.o ncbi_toolkit.o ncbierror.o ncbi_url.o ncbi_cookies.o guard.o ncbi_message.o request_status.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxncbi.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxncbi.so
/bin/ln -f .xncbi.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xncbi.dep
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib TMPL=test_mt -w all
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_mt.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/test_mt.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/test_mt.cpp -o test_mt.o
/bin/rm -f libtest_mt.so .libtest_mt.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtest_mt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC test_mt.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtest_mt.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libtest_mt.so
/bin/ln -f .test_mt.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.test_mt.dep
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib TMPL=test_boost -w all
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/test_boost.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/test_boost.cpp -o test_boost.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/corelib/teamcity_messages.cpp -o teamcity_messages.o
/bin/rm -f libtest_boost.so .libtest_boost.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtest_boost.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC test_boost.o teamcity_messages.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_boost.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtest_boost.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libtest_boost.so
/bin/ln -f .test_boost.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.test_boost.dep
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[3]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[2]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[2]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
/usr/bin/make[2] (Makefile.util.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util TMPL=util -w all
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/random_gen.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/random_gen.cpp:75:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/utf8.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/utf8.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/checksum.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/bytesrc.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/strbuffer.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/strbuffer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/itree.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/random_gen.cpp -o random_gen.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/utf8.cpp -o utf8.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/checksum.cpp -o checksum.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/bytesrc.cpp -o bytesrc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/strbuffer.cpp -o strbuffer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/itree.cpp -o itree.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/nIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/smalldns.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/thread_pool_old.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/ddump_viewer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/strsearch.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/logrotate.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/logrotate.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/format_guess.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/format_guess.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:494,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/format_guess.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/format_guess.cpp:33:
In function 'char* strncpy(char*, const char*, size_t)',
inlined from 'bool ncbi::CFormatGuess::TestFormatNewick(ncbi::CFormatGuess::EMode)' at /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/format_guess.cpp:1008:24:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' accessing 12 bytes at offsets 0 and [0, 16397] may overlap up to 12 bytes at offset 11 [-Wrestrict]
return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/ascii85.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/ascii85.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/smalldns.cpp -o smalldns.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/thread_pool_old.cpp -o thread_pool_old.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/ddump_viewer.cpp -o ddump_viewer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/strsearch.cpp -o strsearch.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/logrotate.cpp -o logrotate.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/format_guess.cpp -o format_guess.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/ascii85.cpp -o ascii85.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITSIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/md5.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/md5.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/file_obsolete.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/file_obsolete.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/unicode.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/unicode.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/dictionary.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/static_map.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp: In static member function 'static void ncbi::CDictionaryUtil::Stem(const string&, std::__cxx11::string*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [5]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [4]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [4]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [4]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [6]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [6]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [8]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [5]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [8]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/thread_nonstop.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/thread_nonstop.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/sgml_entity.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sgml_entity.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/md5.cpp -o md5.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/file_obsolete.cpp -o file_obsolete.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/unicode.cpp -o unicode.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary.cpp -o dictionary.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp -o dictionary_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/thread_nonstop.cpp -o thread_nonstop.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sgml_entity.cpp -o sgml_entity.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/static_set.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/transmissionrw.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/mutex_pool.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/mutex_pool.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/ncbi_cache.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/ncbi_cache.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/line_reader.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/line_reader.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/ncbi_table.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/util_exception.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/static_set.cpp -o static_set.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/transmissionrw.cpp -o transmissionrw.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/miscmath.c -o miscmath.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/mutex_pool.cpp -o mutex_pool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/ncbi_cache.cpp -o ncbi_cache.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/line_reader.cpp -o line_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/util_exception.cpp -o util_exception.o
/usr/bin/g++ -stdIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/multi_writer.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/itransaction.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/itransaction.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/thread_pool.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/thread_pool_ctrl.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/thread_pool_ctrl.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/scheduler.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/uttp.cpp -o uttp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/multi_writer.cpp -o multi_writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/itransaction.cpp -o itransaction.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/thread_pool.cpp -o thread_pool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/thread_pool_ctrl.cpp -o thread_pool_ctrl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/scheduler.cpp -o scheduler.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/rangelist.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/distribution.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/distribution.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/rangelist.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/rangelist.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/util_misc.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >; _Distance = int; _Tp = std::pair<long long int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::{anonymous}::CReverseSort<std::pair<long long int, unsigned int> > >]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<ncbi::{anonymous}::CReverseSort<std::pair<long long int, unsigned int> > >]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::{anonymous}::CReverseSort<std::pair<long long int, unsigned int> > >]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::{anonymous}::CReverseSort<std::pair<long long int, unsigned int> > >]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::CHistogramBinning::SBin&}; _Tp = ncbi::CHistogramBinning::SBin; _Alloc = std::allocator<ncbi::CHistogramBinning::SBin>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::CHistogramBinning::SBin>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long int, unsigned int>}; _Tp = std::pair<long long int, unsigned int>; _Alloc = std::allocator<std::pair<long long int, unsigned int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<long long int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ncbi::CHistogramBinning::SBin}; _Tp = ncbi::CHistogramBinning::SBin; _Alloc = std::allocator<ncbi::CHistogramBinning::SBin>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::CHistogramBinning::SBin>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ncbi::CHistogramBinning::SBin}; _Tp = ncbi::CHistogramBinning::SBin; _Alloc = std::allocator<ncbi::CHistogramBinning::SBin>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/8/bits/stl_vector.h: In member function 'ncbi::CHistogramBinning::TListOfBins* ncbi::CHistogramBinning::x_TryForEvenBins() const':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/8/bits/vector.tcc: In member function 'ncbi::CHistogramBinning::TListOfBins* ncbi::CHistogramBinning::x_IdentifyClusters() const':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/table_printer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/table_printer.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_url.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_cookies.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/retry_ctx.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/stream_source.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/distribution.cpp -o distribution.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/rangelist.cpp -o rangelist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/util_misc.cpp -o util_misc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp -o histogram_binning.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/table_printer.cpp -o table_printer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/retry_ctx.cpp -o retry_ctx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/stream_source.cpp -o stream_source.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/file_manifest.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
OURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/file_manifest.cpp -o file_manifest.o
/bin/rm -f libxutil.so .libxutil.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxutil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC random_gen.o utf8.o checksum.o bytesrc.o strbuffer.o itree.o smalldns.o thread_pool_old.o ddump_viewer.o strsearch.o logrotate.o format_guess.o ascii85.o md5.o file_obsolete.o unicode.o dictionary.o dictionary_util.o thread_nonstop.o sgml_entity.o static_set.o transmissionrw.o miscmath.o mutex_pool.o ncbi_cache.o line_reader.o util_exception.o uttp.o multi_writer.o itransaction.o thread_pool.o thread_pool_ctrl.o scheduler.o distribution.o rangelist.o util_misc.o histogram_binning.o table_printer.o retry_ctx.o stream_source.o file_manifest.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxutil.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxutil.so
/bin/ln -f .xutil.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xutil.dep
make[3]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[2]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[2]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
NOTE: Skipping project regexp due to unmet requirements:
LocalPCRE
make[3]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/regexp TMPL=regexp -w mark-as-disabled
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[3]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[2]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[2]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[3]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/make[3] (Makefile.xregexp.lib): Nothing to be done for `export-headers'.
/usr/bin/make[3] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/xregexp TMPL=xregexp -w all
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/xregexp/regexp.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/xregexp/arg_regexp.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/xregexp/arg_regexp.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/xregexp/mask_regexp.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/xregexp/mask_regexp.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp.cpp -o regexp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/xregexp/arg_regexp.cpp -o arg_regexp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/xregexp/mask_regexp.cpp -o mask_regexp.o
/bin/rm -f libxregexp.so .libxregexp.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxregexp.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC regexp.o arg_regexp.o mask_regexp.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -lpcre
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxregexp.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxregexp.so
/bin/ln -f .xregexp.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xregexp.dep
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/xregexp TMPL=xregexp_template_tester -w all
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp_template_tester.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp_template_tester.cpp -o regexp_template_tester.o
/bin/rm -f libxregexp_template_tester.so .libxregexp_template_tester.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxregexp_template_tester.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC regexp_template_tester.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxregexp -lxncbi -lpcre
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp_template_tester.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxregexp_template_tester.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxregexp_template_tester.so
/bin/ln -f .xregexp_template_tester.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xregexp_template_tester.dep
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[3]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[2]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[2]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder TMPL=project_tree_builder -w all
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_site.hpp:31,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_makefile.hpp:31,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_makefile.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_masterproject_generator.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.cpp -o file_contents.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure.cpp -o msvc_configure.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_makefile.cpp -o msvc_makefile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_masterproject_generator.cpp -o msvc_masterproject_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.cpp -o msvc_prj_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.cpp -o msvc_prj_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blaIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_site.hpp:31,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_site.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_sln_generator.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_sln_generator.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
st+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.cpp -o msvc_project_context.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_site.cpp -o msvc_site.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_sln_generator.cpp -o msvc_sln_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.cpp -o proj_builder_app.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.cpp -o proj_datatool_generated_src.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.cpp -o proj_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree_builder.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree_builder.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/resolver.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_src_resolver.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_src_resolver.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/resolver.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/resolver.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree.cpp -o proj_tree.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree_builder.cpp -o proj_tree_builder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_src_resolver.cpp -o proj_src_resolver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.cpp -o proj_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/resolver.cpp -o resolver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.cpp -o msvc_configure_prj_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_projeIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_projects.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_projects.cpp:30:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_dlls_info.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_dlls_info.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/configurable_file.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/configurable_file.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_gui.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/mac_prj_generator.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cts.cpp -o proj_projects.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_dlls_info.cpp -o msvc_dlls_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.cpp -o msvc_prj_files_collector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/configurable_file.cpp -o configurable_file.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_gui.cpp -o ptb_gui.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.cpp -o ptb_registry.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp -o mac_prj_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -WerrIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/prj_file_collector.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
or=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/prj_file_collector.cpp -o prj_file_collector.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie file_contents.o msvc_configure.o msvc_makefile.o msvc_masterproject_generator.o msvc_prj_generator.o msvc_prj_utils.o msvc_project_context.o msvc_site.o msvc_sln_generator.o proj_builder_app.o proj_datatool_generated_src.o proj_item.o proj_tree.o proj_tree_builder.o proj_src_resolver.o proj_utils.o resolver.o msvc_configure_prj_generator.o proj_projects.o msvc_dlls_info.o msvc_prj_files_collector.o configurable_file.o ptb_gui.o ptb_registry.o mac_prj_generator.o prj_file_collector.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -lxregexp -lpcre -ldl -lm -lpthread -o project_tree_builder
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f project_tree_builder /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/project_tree_builder
make[3]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
make[2]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
**********************************************************************
Running project_tree_builder. Please wait.
**********************************************************************
./build-system/project_tree_builder/project_tree_builder -dll -dtdep -conffile /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder.ini -logfile Flat.configuration_log /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ src Makefile.flat
Done
===============================================================================
NCBI C++ Toolkit documentation:
Online: http://www.ncbi.nlm.nih.gov/toolkit/doc/book/
Local: ./doc/public/index.html
For the available configuration flags run: ./configure --help
CFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC
CXXFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC
CPPFLAGS = -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE
LDFLAGS = -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O
LIBRARIES: build as dynamic by default
FEATURES: GCC MT LFS DLL DLL_BUILD unix WinMain Linux
PACKAGES:
enabled: Iconv Z BZ2 PCRE MBEDTLS GMP GMP NETTLE NETTLE GNUTLS Boost.Spirit Boost.Test.Included LMDB LocalLMDB
disabled: UUID FUSE LIBUNWIND LocalZ LocalBZ2 LZO LocalPCRE GCRYPT OPENSSL KRB5 CURL Sybase DBLib FreeTDS MySQL BerkeleyDB BerkeleyDB++ ODBC PYTHON PYTHON25 PYTHON26 PYTHON27 PYTHON3 PERL Boost.Filesystem Boost.Iostreams Boost.Program-Options Boost.Regex Boost.System Boost.Test Boost.Thread C-Toolkit OpenGL MESA GLUT GLEW wxWidgets wx2.8 Fast-CGI LocalSSS LocalMSGMAIL2 SSSUTILS LocalNCBILS NCBILS2 SSSDB SP ORBacus ICU EXPAT SABLOT LIBXML LIBXSLT LIBEXSLT Xerces Xalan Zorba SQLITE3 SQLITE3ASYNC VDB OECHEM SGE MUPARSER HDF5 JPEG PNG TIFF GIF UNGIF XPM FreeType FTGL MAGIC MIMETIC GSOAP AVRO Cereal SASL2 MONGODB MONGODB3 GMOCK LAPACK LIBUV LIBSSH2 CASSANDRA LIBXLSXWRITER GRPC
PROJECTS:
enabled: cgi serial objects app algo
disabled: local_lbsm connext ncbi_crypt bdb dbapi ctools gui gbench
Tools / flags / paths: /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.mk
Configuration header: /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc/ncbiconf_unix.h
To build everything: cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make all_r
or simply run /usr/bin/make in the current directory
Alternatively, cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make -f Makefile.flat
******* CONFIGURATION SUCCESSFUL *******
make[1]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1'
debian/rules override_dh_auto_build-arch
make[1]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1'
cd c++/BUILD/build && \
make -j4 -f Makefile.flat all_projects="algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/"
make[2]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build'
/usr/bin/make -w -j4 --jobserver-auth=3,4 -f Makefile.flat ptb_all.real MTARGET=
make[3]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build'
make[3]: warning: -j4 forced in submake: resetting jobserver mode.
cd corelib/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd serial/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd serial/datatool/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
cd util/tables/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
/usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
cd connect/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
cd algo/blast/core/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
/usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
cd util/sequtil/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
cd objtools/blast/services/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
cd util/creaders/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
cd objmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.creaders.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
cd objtools/readers/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
cd objmgr/util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
cd objtools/seqmasks_io/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
/usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
/usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
cd algo/blast/dbindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
cd algo/dustmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
cd algo/winmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
cd objtools/alnmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
cd algo/blast/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
/usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
cd util/compress/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
/usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
cd cgi/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
cd html/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
cd objtools/align_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
/usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
cd algo/blast/blastinput/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
cd algo/blast/proteinkmer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
cd util/xregexp/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/make[4] (Makefile.proteinkmer.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
cd objtools/cleanup/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
cd objtools/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
cd algo/blast/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
/usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'.
cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
cd algo/blast/igblast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
cd objtools/simple/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
/usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
/usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
cd app/dustmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
cd algo/segmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/Makefile.legacy_blast builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast -w -j4 --jobserver-auth=9,10 all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
cd app/segmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
cd app/winmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/legacy_blast.pl
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/Makefile.update_blastdb builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast -w -j4 --jobserver-auth=9,10 all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd objmgr/split/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/update_blastdb.pl
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker -w -j4 --jobserver-auth=9,10 all
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
cd objtools/align_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'.
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/windowmasker_2.2.22_adapter.py
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
cd corelib/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j4 --jobserver-auth=7,8 all
/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
cd util/tables/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/tables TMPL=tables -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/compo_heap.c:137:1: warning: 's_CompoHeapIsValid' defined but not used [-Wunused-function]
s_CompoHeapIsValid(BlastCompo_HeapRecord * heapArray, int i, int n)
^~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd connect/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect TMPL=xconnect -w -j4 --jobserver-auth=7,8 all
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_common per /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/.#lock-map.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algebra.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/bmake[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/bin/mkdir -p mbedtls
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbsmd_stub.c -o ncbi_lbsmd_stub.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_types.c -o ncbi_types.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.c -o ncbi_priv.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_core.c -o ncbi_core.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -s/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/redo_alignment.c:200:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function]
s_DistinctAlignmentsLength(BlastCompo_Alignment * list)
^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/redo_alignment.c:185:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function]
s_AlignmentsAreSorted(BlastCompo_Alignment * alignments)
^~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:76:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c: In function 'CORE_SetLOGFILE_NAME_Ex':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c:150:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(1, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o
/bin/rm -f libtables.so .libtables.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtables.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC raw_scoremat.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtables.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libtables.so
/bin/ln -f .tables.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.tables.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
cd util/sequtil/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:77:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_DoLog':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:508:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(112, level,
^~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:548:13: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(109, level, data, size,
^~~~~~~~~~~~
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:581:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(113, level,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:589:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_InitAPI_':
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:872:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Secure socket layer (SSL) has not"
^~~~~~~~
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostname':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1027:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX'
CORE_LOG_ERRNO_EXX(103, eLOG_Error,
^~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1036:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(104, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1169:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(106, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_getlocalhostaddress':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1208:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1234:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(155, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr_':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1365:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(108, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1399:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Warning,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'x_TryLowerSockFileno':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1523:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(111, eLOG_Trace,
^~~~~~~~~~~
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil TMPL=sequtil -w -j4 --jobserver-auth=7,8 all
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Select_':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1648:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(145, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1777:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(5, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Poll_':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1921:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2066:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error,
^~~~~~~~~~~~~~~~~~~
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2640:13: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace,
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2650:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(6, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2685:25: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace,
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Recv':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2836:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(7, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Read_':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3017:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(8, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Send':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3368:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(11, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_WritePending':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3520:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(12, sock->log != eOff
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Shutdown':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3692:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec)
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3729:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(127, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3778:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(16, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Close_':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3842:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(17, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3858:21: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(18, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3888:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(19, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3947:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Connect_':
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:115:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1412:9: note: in expansion of macro 'LOG_WRITE'
LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11,
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4064:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(131, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4083:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(142, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4107:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(22, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4138:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(23, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4204:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(151, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4215:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(135, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1637:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)");
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1654:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical,
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4278:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(25, sock->log != eOff
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1686:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1702:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4322:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(26, sock->log != eOff
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1753:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1770:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1814:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Create':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4408:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(27, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1847:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(9, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_CreateOnTop':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4461:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(47, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1887:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(8, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4484:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(148, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4522:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(48, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4563:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(50, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4577:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(49, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4640:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(132, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4663:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(153, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4674:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(138, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4694:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(124, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4709:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(43, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_CreateListening':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4762:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(144, eLOG_Error,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'x_ReInit':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:273:13: note: in expansion of macro 'CONN_LOG'
CONN_LOG(4, ReInit, eLOG_Critical, "Partial re-init not allowed");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:303:21: note: in expansion of macro 'CONN_LOG'
CONN_LOG(3, Close,
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4806:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(34, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:307:21: note: in expansion of macro 'CONN_LOG'
CONN_LOG(3, ReInit, eLOG_Error,
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4852:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(35, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 's_Open':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:384:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(5, Open, eLOG_Error, "Failed to open connection");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4907:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_CreateEx':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:426:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(2, Create, eLOG_Error, "NULL connector");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_ReInit':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4928:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(150, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4998:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(37, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:448:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(1, ReInit);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:448:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(1, ReInit);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5065:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(115, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Accept':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_GetType':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:456:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(6, GetType, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5112:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(39, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:456:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(6, GetType, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Description':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5168:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(40, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:465:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(7, Description, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5227:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(41, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:465:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(7, Description, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_GetPosition':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5286:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(42, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:477:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(30, GetPosition, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:477:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(30, GetPosition, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5297:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(152, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5308:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(137, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:490:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(31, GetPosition, eLOG_Error, errbuf, 0);
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5328:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(128, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_SetTimeout':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:506:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(8, SetTimeout);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:506:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(8, SetTimeout);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_CloseListening':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5373:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(44, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:546:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(9, SetTimeout, eLOG_Error, errbuf, eIO_InvalidArg);
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_GetTimeout':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5402:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(45, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:561:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(10, GetTimeout, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:561:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(10, GetTimeout, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:569:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(11, GetTimeout, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:584:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(12, GetTimeout, eLOG_Error, errbuf, 0);
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5490:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(20, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Wait':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:600:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(13, Wait);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:600:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(13, Wait);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5538:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(94, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:644:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(event != eIO_Read ? 15 : 14, Wait, level,
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 's_CONN_Write':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_SendMsg':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:665:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(16, Write, eLOG_Critical, "Cannot write data");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5573:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(154, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:707:13: note: in expansion of macro 'CONN_LOG'
CONN_LOG(17, Write, level, "Unable to write data");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5589:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(88, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Write':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:749:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(18, Write);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5598:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(89, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:749:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(18, Write);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5648:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(90, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Pushback':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(19, Pushback);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(19, Pushback);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5694:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(91, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Flush':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:804:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(20, Flush);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:804:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(20, Flush);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5737:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(28, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5747:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(143, eLOG_Warning, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:819:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(21, Flush, eLOG_Warning, "Failed to flush");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5759:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(29, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 's_CONN_Read':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5769:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(30, eLOG_Warning, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:844:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(22, Read, eLOG_Critical, "Cannot read data");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5788:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(116, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:885:17: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(32, Read, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5850:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(117, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:911:13: note: in expansion of macro 'CONN_LOG'
CONN_LOG(23, Read, level, "Unable to read data");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Read':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:962:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(24, Read);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:962:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(24, Read);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6061:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(46, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_ReadLine':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1011:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(25, ReadLine);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1011:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(25, ReadLine);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1059:17: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(35, ReadLine, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Status':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1078:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(26, Status);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1078:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(26, Status);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Reconnect':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6249:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(52, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6259:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(53, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Close':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1117:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(27, Close);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1117:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(27, Close);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6271:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(51, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_SetCallback':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Shutdown':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6301:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(54, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1137:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(28, SetCallback);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1137:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(28, SetCallback);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6308:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(55, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1143:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(29, SetCallback, eLOG_Error, errbuf, eIO_InvalidArg);
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6316:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(15, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_GetSOCK':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1164:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(36, GetSOCK);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1164:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(36, GetSOCK);
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6446:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(56, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6474:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(57, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6488:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(58, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6502:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(59, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6511:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(60, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6521:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(61, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6531:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(62, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6668:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(63, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6709:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(64, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Read':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6751:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(65, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6761:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(66, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6792:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(125, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Pushback':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6868:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(67, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6920:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(68, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6947:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(69, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6957:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(70, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6976:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(71, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6983:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(72, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7133:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(73, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7196:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(158, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7203:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(159, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7216:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(160, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7233:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(156, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7240:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(157, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7253:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(75, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7305:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(76, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Bind':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7426:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(79, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7433:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(78, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7451:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(80, error != SOCK_EADDRINUSE
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7467:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(114, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Connect':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7496:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(82, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7503:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(81, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7522:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(83, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7535:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(84, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7564:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(85, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WaitMsg':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7592:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(96, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7599:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(95, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_RecvMsg':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7638:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(93, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7645:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(92, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SendMsg':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7682:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(87, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7689:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(86, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WipeMsg':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7721:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(98, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7728:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(97, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7748:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(99, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SetBroadcast':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7766:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(101, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7773:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(100, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7793:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(102, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetReuseAddress':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7955:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(74, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetupSSLInternal':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:8339:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Cannot reset SSL while it is in use");
^~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro 'METACONN_LOG'
METACONN_LOG(34, eLOG_Error,
^~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c: In function 'METACONN_Insert':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG'
METACONN_LOG(33, eLOG_Error,
^~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c: In function 's_VT_Open':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c:171:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(163, eLOG_Error,
^~~~~~~~~~~
last/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o
/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libcomposition_adjustment.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libcomposition_adjustment.so
/bin/ln -f .composition_adjustment.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.composition_adjustment.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
cd util/creaders/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=creaders UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/creaders TMPL=creaders -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
pecs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c -o ncbi_util.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c -o ncbi_socket.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c -o ncbi_connection.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c -o ncbi_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_Adjust':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:368:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(2, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:383:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(17, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:409:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:424:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(18, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:434:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:458:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_Connect':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:561:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:701:25: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(20, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_ConnectAndSend':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:912:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(6, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 'x_ReadChunkHead':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1043:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(23, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_ReadData':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1114:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(24, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1138:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(25, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_ReadHeader':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1212:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(7, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1249:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, level,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1313:9: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(9, fatal ? eLOG_Error : eLOG_Note, hdr, size,
^~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1330:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(22, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1349:17: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(9, eLOG_Note, hdr, size,
^~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1399:25: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1557:21: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1575:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(11, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1630:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(19, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1635:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(12, err && !(uuu->flags & fHTTP_SuppressMessages)
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1646:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1654:17: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(14, eLOG_Note, s, n,
^~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1663:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(15, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_Read':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1834:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(16, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1877:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(21, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_VT_Write':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:2116:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(24, eLOG_Error,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_manip.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert_imp.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:115:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Create':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:269:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:290:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(2, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_AttachFast':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:314:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:323:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Attach':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:354:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(34, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:337:68: warning: variable 'p' set but not used [-Wunused-but-set-variable]
const SHEAP_HeapBlock* b = (const SHEAP_HeapBlock*) base, *p = 0;
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:115:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Find':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:451:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Alloc':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:658:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(6, eLOG_Warning, "Heap Alloc: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:664:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:711:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Free':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:833:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(10, eLOG_Warning, "Heap Free: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:839:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(11, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:852:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:860:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(12, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:872:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(14, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_FreeFast':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:884:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(15, eLOG_Warning, "Heap Free: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:890:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(16, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:904:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(17, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:915:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(18, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:922:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(19, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Trim':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:944:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(30, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:979:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(31, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1006:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(32, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Walk':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1028:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(28, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1042:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(26, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1045:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(27, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1057:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(23, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1144:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(21, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1159:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(20, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1177:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(22, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1188:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(24, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Walk':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1204:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(29, eLOG_Warning, "Heap Walk: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Destroy':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1306:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(33, eLOG_Error,
^~~~~~~~~~~
In file included from /usr/include/string.h:494,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c:35:
In function 'strcpy',
inlined from 's_RemoveBasePairCountCommentsFromData' at /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c:4418:25,
inlined from 's_ProcessAlignFileRawForMarkedIDs' at /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c:4452:5,
inlined from 'ReadAlignmentFileEx2' at /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c:6116:9:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:90:10: warning: '__builtin_strcpy' accessing 1 byte at offsets 0 and [0, 2147483647] may overlap 1 byte at offset 0 [-Wrestrict]
return __builtin___strcpy_chk (__dest, __src, __bos (__dest));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
TRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c -o ncbi_service.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_host_infoIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:41:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c: In function 'x_ServiceName':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:85:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:94:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c: In function 'x_Open':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:336:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c: In function 's_Resolve':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c:198:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Error,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function 's_OpenDispatcher':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:105:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function 's_ParseHeader':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:180:49: warning: format '%n' expects argument of type 'int *', but argument 7 has type 'unsigned int *' [-Wformat=]
if (sscanf(header, "%u.%u.%u.%u%n", &i1, &i2, &i3, &i4, &n) < 4
~^ ~~
%n
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:181:51: warning: format '%n' expects argument of type 'int *', but argument 5 has type 'unsigned int *' [-Wformat=]
|| sscanf(header + n, "%hu%x%n", &uuu->port, &tkt, &m) < 2
~^ ~~
%n
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function 's_Open':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:890:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:916:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function 's_VT_Open':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:1048:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:1126:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(6, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:1138:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(11, eLOG_Error,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c: In function 's_SendRcpt':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:417:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(3, "Recipient address is too long");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:420:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:428:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(4, write_error);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:432:13: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(5, proto_error, buf);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c: In function 'CORE_SendMailEx':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:487:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(6, "SSendMailInfo inited improperly: invalid magic");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:492:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(7, "At least one message recipient must be specified");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:502:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(8, "Cannot connect to sendmail", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:509:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(9, "Protocol error in connection init", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:514:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(10, "Unable to get local host name");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:519:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(11, "Write error in HELO command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:522:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(12, "Protocol error in HELO command", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:527:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(13, "Write error in MAIL command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:530:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(14, "Protocol error in MAIL command", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:551:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(15, "Write error in DATA command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:553:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(16, "Protocol error in DATA command", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:584:21: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(32, "Write error in sending Date");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:591:21: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(33, "Write error in sending From");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:599:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(17, "Write error in sending Subject");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:606:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(18, "Write error in sending To");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:613:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(19, "Write error in sending Cc");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:617:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(2, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:628:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(20, "Write error in sending mailer information");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:656:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(21, "Write error while sending custom header");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:665:13: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(22, error, buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:668:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(23, "Write error in finalizing custom header");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:677:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(24, "Write error in message body delimiter");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:703:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(25, "Write error while sending message body");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:712:13: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(26, error, buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:716:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(27, "Write error while finalizing message body");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:719:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(28, "Write error while finalizing message");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:724:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(29, "Protocol error in sending message", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:727:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(30, "Write error in QUIT command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:729:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(31, "Protocol error in QUIT command", buffer);
^~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_tables.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_tables.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:50:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseData':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:145:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:150:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:164:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(11, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:168:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:185:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, xxx->send ? eLOG_Error : eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPReply':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:293:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPCommandEx':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:373:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPLogin':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:606:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:965:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(2, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPXfer':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:1125:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPPollCntl':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:1656:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(12, xxx->data ? eLOG_Error : eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Open':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:1926:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Write':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:2001:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(6, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_CreateConnector':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:2311:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "fFTP_UseProxy not yet implemented");
^~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_shared.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c -o alnread.o
/bin/rm -f libcreaders.so .libcreaders.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libcreaders.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC alnread.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcreaders.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libcreaders.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libcreaders.so
/bin/ln -f .creaders.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.creaders.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
cd html/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html TMPL=html -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
.c -o ncbi_host_info.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lb.c -o ncbi_lb.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_local.c -o ncbi_local.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wfmake[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil.cpp -o sequtil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o
/bin/rm -f libsequtil.so .libsequtil.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libsequtil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/gene_info_reader/gene_info.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/env_reg.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/gene_info_reader/gene_info.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/gene_info_reader/file_utils.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/file_utils.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_StringConcat':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:437:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_StringNConcat':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:462:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_RegGet':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:486:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:500:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_GetLBOSAddressEx':
-g -O -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libsequtil.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libsequtil.so
/bin/ln -f .sequtil.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.sequtil.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:568:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Trace, "Getting LBOS addresses...");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:582:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Error, "Use of custom LBOS address "
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:589:17: note: in expansion of macro 'CORE_LOG_ERRNO_X'
CORE_LOG_ERRNO_X(1, eLOG_Warning, errno,
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:597:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:608:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ReadLbosresolver':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:175:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(0, 0, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:727:9: note: in expansion of macro 'CORE_LOGF_ERRNO'
CORE_LOGF_ERRNO(eLOG_Warning, errno,
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:175:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(0, 0, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:736:9: note: in expansion of macro 'CORE_LOGF_ERRNO'
CORE_LOGF_ERRNO(eLOG_Warning, errno,
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:745:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Warning,
^~~~~~~~~
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
cd corelib/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ConnectURL':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:829:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("Parsing URL \"%s\"", url));
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:831:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Cannot parse URL");
^~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:834:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("Creating HTTP%s connector",
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:841:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Cannot create HTTP connector");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:844:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Trace, "Creating connection");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:846:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Cannot create connection");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_UrlReadAll':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:905:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_UrlReadAll: No RAM. "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:917:13: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical, ("s_LBOS_UrlReadAll: LBOS returned "
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:945:17: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "s_LBOS_UrlReadAll: Buffer "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:959:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "s_LBOS_UrlReadAll: Buffer shrink error, using "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ResolveIPPort':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:991:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_ResolveIPPort: No RAM. "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1050:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_ResolveIPPort: No RAM. "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_FillCandidates':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1200:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace, ("Trying to find servers of \"%s\" with "
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1206:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace, ("No servers of \"%s\" found by LBOS",
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1211:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace, ("Found %u servers of \"%s\" with "
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1224:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_CheckAnnounceArgs':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1254:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1261:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, missing http:// or "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1271:17: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1281:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, invalid port.");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1285:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1290:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1295:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_CheckDeannounceArgs':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1309:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1315:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1320:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1325:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Replace0000WithIP':
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1410:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Failed memory allocation. Most likely, "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1418:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1425:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ConstructData':
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1569:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Error, "Could not allocate memory for LBOS mapper");
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Initialize':
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1644:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Trace, "No DTAB in registry");
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1646:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace,
^~~~~~~~~~~
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1660:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ParseHeader':
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1708:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical, ("s_LBOS_UrlReadAll: LBOS returned status "
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Reset':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1771:17: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_Reset: No RAM. "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'SERV_LBOS_Open':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1897:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Mask was provided instead of service name. "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1905:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "\"iter->name\" is null, not able "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1920:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Could not concatenate dbaf with service "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1935:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1949:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical,
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Announce':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2064:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Announce failed. No LBOS found.");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2069:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Warning, ("Announce failed. "
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2078:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Failed memory allocation. Most likely, "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2088:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "g_LBOS_Announce: LBOS answered 200 OK, but "
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2101:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Warning, ("Announce failed. "
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_Announce':
/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2167:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_AnnounceFromRegistry':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2236:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2243:53: warning: format '%d' expects argument of type 'int *', but argument 3 has type 'unsigned int *' [-Wformat=]
if (strlen(port_str) > 5 || (sscanf(port_str, "%d", &port) != 1) ||
~^ ~~~~~
%d
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_Deannounce':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2358:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_DNSResolve, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_DeannounceAll':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2416:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_CheckConfArgs':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2468:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2475:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_ServiceVersionSet':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2567:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
cd util/xregexp/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
cd util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
cd serial/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial TMPL=serial -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_Init':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:280:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Libc, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_CONN_Create':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:301:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Connect, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:310:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Connect, eLOG_Error, "Unable to create connector.");
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_UpdateDtab':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:378:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical, "Couldn't alloc for dtab.");
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_GetReqMethod':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:398:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_GetScheme':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:420:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_GetProxyPort':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:443:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_AddServerInfo':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:527:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_ParseExpires':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:577:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:607:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_ReadFullResponse':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:652:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:686:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_HttpRead, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:706:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_TooLong, eLOG_Error, "Insufficient buffer size.");
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_ParseResponse':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:749:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:754:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:760:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:776:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:781:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_NoService, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:789:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:836:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:844:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:857:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:863:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:897:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:914:21: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:924:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:941:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:964:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:983:21: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:989:21: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1007:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1024:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_BadData, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1037:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_GetDtabHeaderFromBuf':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1079:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_UpdateDtabFromRegistry':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1140:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_ProcessDtab':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1181:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_TooLong, eLOG_Error, "Dtab too long.");
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 'SERV_NAMERD_Open':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1405:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_BadData, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1415:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_BadData, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1424:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_BadData, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1431:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1439:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical, "Couldn't clone net_info.");
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1446:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_BadData, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/parson.c: In function 'remove_comments':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/parson.c:281:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
for (i = 0; i < (ptr - string) + end_token_len; i++)
^~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/parson.c:283:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
string = ptr + end_token_len - 1;
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/page.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/node.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/html.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/htmlhelper.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ormat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_base64.c -o ncbi_base64.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_version.c -o ncbi_version.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c -o ncbi_lbos.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c -o ncbi_namerd.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/parson.c -o parson.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/hookdatakey.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/hookdata.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/typeinfo.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objectinfo.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_socket.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_socket_unix.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_cxx.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_core_cxx.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/email_diag_handler.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/email_diag_handler.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_conn_stream.hpp:73,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_streambuf.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_streambuf.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/hookdata.cpp -o hookdata.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/hookdatakey.cpp -o hookdatakey.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/typeinfo.cpp -o typeinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objectinfo.cpp -o objectinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objectiter.cpp -o objectiter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objectio.cpp -o objectio.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THRIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objectiter.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_iprange.c -o ncbi_iprange.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_localip.c -o ncbi_localip.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objectio.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o
/bin/rm -f libgene_info.so .libgene_info.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libgene_info.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libgene_info.so
/bin/ln -f .gene_info.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.gene_info.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
cd util/compress/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api TMPL=compress -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/pager.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_conn_stream.hpp:73,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_streambuf.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_stream.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/stream_utils.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/cgi/ncbicgi.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/selection.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/typeref.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/typemap.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/streambuf.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/stream_util.hpp:49,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream_util.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/streambuf.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/streambuf.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/compress.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/compress.cpp -o compress.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream.cpp -o stream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/streambuf.cpp -o streambuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream_util.cpp -o stream_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/bzip2.cpp -o bzip2.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/zlib.cpp -o zlib.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/node.cpp -o node.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/html.cpp -o html.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/htmlhelper.cpp -o htmlhelper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/page.cpp -o page.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/pager.cpp -o pager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/selection.cpp -o selection.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/stdtypes.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/enumerated.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/impl/ptrinfo.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/ptrinfo.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/bzip2.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/bzip2.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/zlib.cpp:40:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe_connector.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/lzo.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/autoptrinfo.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/reader_zlib.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp: In destructor 'virtual ncbi::CNlmZipReader::~CNlmZipReader()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp:281:19: warning: enum constant in boolean context [-Wint-in-bool-context]
if ( m_Own && fOwnReader ) {
^~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/html/components.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/components.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/html/commentdiag.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/commentdiag.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:475:13: warning: In the GNU C Library, "major" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "major", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"major", you should undefine it after including <sys/types.h>.
return major(m_Stat.st_rdev);
^~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:490:13: warning: In the GNU C Library, "minor" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "minor", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"minor", you should undefine it after including <sys/types.h>.
return minor(m_Stat.st_rdev);
^~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:2221:13: warning: In the GNU C Library, "makedev" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "makedev", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"makedev", you should undefine it after including <sys/types.h>.
m_Current.m_Stat.st_rdev = makedev((unsigned int) val, usum);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/typeref.cpp -o typeref.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/typemap.cpp -o typemap.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/stdtypes.cpp -o stdtypes.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/enumerated.cpp -o enumerated.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/ptrinfo.cpp -o ptrinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/continfo.cpp -o continfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/html/indentstream.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/indentstream.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe.cpp:41:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_process.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_pipe.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_pipe_connector.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe_connector.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp:87:13: warning: In the GNU C Library, "major" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "major", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"major", you should undefine it after including <sys/types.h>.
return major(m_Stat.st_rdev);
^~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp:103:13: warning: In the GNU C Library, "minor" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "minor", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"minor", you should undefine it after including <sys/types.h>.
return minor(m_Stat.st_rdev);
^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/continfo.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_conn_reader_writer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_reader_writer.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:52:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/html/node.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/html_exception.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/impl/stltypesimpl.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/stltypes.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
PIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_misc.cpp -o ncbi_misc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe_connector.cpp -o ncbi_namedpipe_connector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe.cpp -o ncbi_pipe.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe_connector.cpp -o ncbi_pipe_connector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_reader_writer.cpp -o ncbi_conn_reader_writer.o
/usr/bin/gIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/html/htmlhelper.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/writer_htmlenc.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/archive_.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/memberid.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/components.cpp -o components.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/commentdiag.cpp -o commentdiag.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/indentstream.cpp -o indentstream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/html_exception.cpp -o html_exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/html/writer_htmlenc.cpp -o writer_htmlenc.o
/bin/rm -f libxhtml.so .libxhtml.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxhtml.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC node.o html.o htmlhelper.o page.o pager.o selection.o components.o commentdiag.o indentstream.o html_exception.o writer_htmlenc.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxhtml.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxhtml.so
/bin/ln -f .xhtml.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xhtml.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
cd cgi/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi TMPL=cgi -w -j4 --jobserver-auth=7,8 all
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/.#lock-map.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_socket.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_userhost.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_session.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos_cxx.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 'x_GnuTlsLogger':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:190:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Note, ("GNUTLS%d: %.*s", level, (int) len, message));
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 'x_ErrorToStatus':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:251:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("GNUTLS error %d -> CONNECT GNUTLS status %s",
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 'x_StatusToError':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:293:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("CONNECT GNUTLS status %s -> %s %d",
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 's_GnuTlsCreate':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:307:5: warning: 'gnutls_connection_end_t' is deprecated [-Wdeprecated-declarations]
gnutls_connection_end_t end = (side == eSOCK_Client
^~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:318:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Error, "Server-side SSL not yet supported with GNUTLS");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:330:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Error, ("Cannot %s GNUTLS credentials: %s",
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 's_GnuTlsInit':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:692:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(level, ("GNUTLS V%s (LogLevel=%d)",
^~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/memberlist.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:218:33: warning: 'version' may be used uninitialized in this function [-Wmaybe-uninitialized]
_mess.message = NcbiMessagePlusError(&_mess.dynamic, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:657:17: note: 'version' was declared here
const char* version;
^~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 'x_MbedTlsLogger':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:170:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Note, ("MBEDTLS%d: %.*s", level, (int) len, message));
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 'x_ErrorToStatus':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:250:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("MBEDTLS error %d -> CONNECT MBEDTLS status %s",
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 'x_StatusToError':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:292:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("CONNECT MBEDTLS status %s -> %s %d",
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 's_MbedTlsCreate':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:336:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Error,
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 's_MbedTlsInit':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:611:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical,
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:639:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(level, ("%s V%s (LogLevel=%d)",
^~~~~~~~~
++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_userhost.cpp -o ncbi_userhost.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_session.cpp -o ncbi_http_session.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos_cxx.cpp -o ncbi_lbos_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_monkey.cpp -o ncbi_monkey.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c -o ncbi_mbedtls.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FOIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c: In function 's_NoTlsInit':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:58:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "SSL has been explicitly disabled");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c: In function 'x_SetupNoTls':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:69:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Trace, "SSL has been explicitly disabled");
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c: In function 'NcbiSetupTls':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:91:17: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical, ("Unknown TLS provider \"%s\"", str));
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:95:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "No TLS support included in this build");
^~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/request_ctx.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgir.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgictx.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/compress/zlib.hpp:54,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_zip.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c -o ncbi_tls.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/aes.c -o mbedtls/aes.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/aesni.c -o mbedtls/aesni.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/arc4.c -o mbedtls/arc4.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/asn1parse.c -o mbedtls/asn1parse.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/asn1write.c -o mbedtls/asn1write.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/base64.c -o mbedtls/In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/classinfob.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_zip.cpp:45:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c: In function 'ncbi::tinfl_status ncbi::tinfl_decompress(ncbi::tinfl_decompressor*, const mz_uint8*, size_t*, ncbi::mz_uint8*, ncbi::mz_uint8*, size_t*, ncbi::mz_uint32)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:1531:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
for ( i = 0; i <= 143; ++i) *p++ = 8; for ( ; i <= 255; ++i) *p++ = 9; for ( ; i <= 279; ++i) *p++ = 7; for ( ; i <= 287; ++i) *p++ = 8;
^~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:1531:47: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
for ( i = 0; i <= 143; ++i) *p++ = 8; for ( ; i <= 255; ++i) *p++ = 9; for ( ; i <= 279; ++i) *p++ = 7; for ( ; i <= 287; ++i) *p++ = 8;
^~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c: In function 'void ncbi::tdefl_find_match(ncbi::tdefl_compressor*, ncbi::mz_uint, ncbi::mz_uint, ncbi::mz_uint, ncbi::mz_uint*, ncbi::mz_uint*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:2361:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!dist) break; p = s; q = d->m_dict + probe_pos; for (probe_len = 0; probe_len < max_match_len; probe_len++) if (*p++ != *q++) break;
^~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:2361:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!dist) break; p = s; q = d->m_dict + probe_pos; for (probe_len = 0; probe_len < max_match_len; probe_len++) if (*p++ != *q++) break;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp: In member function 'void ncbi::CCgiRequest::GetCGIEntries(ncbi::CEntryCollector_Base&) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp:1648:16: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp: In member function 'ncbi::CStringUTF8 ncbi::CCgiEntry::GetValueAsUTF8(ncbi::CCgiEntry::EOnCharsetError) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp:1905:12: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
catch (CException) {
^~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/member.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp.cpp: In member function 'bool ncbi::CCgiApplication::x_ProcessVersionRequest()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp.cpp:1891:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
URCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/stltypes.cpp -o stltypes.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/memberid.cpp -o memberid.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/memberlist.cpp -o memberlist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/item.cpp -o item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/classinfob.cpp -o classinfob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/member.cpp -o member.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/classinfo.cpp -o classinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-cobase64.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/bignum.c -o mbedtls/bignum.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/blowfish.c -o mbedtls/blowfish.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/camellia.c -o mbedtls/camellia.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ccm.c -o mbedtls/ccm.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/cipher.c -o mbedtls/cipher.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/cipher_wrap.c -o mbedtls/cipher_wrap.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-stroIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/classinfo.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ng -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/cmac.c -o mbedtls/cmac.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ctr_drbg.c -o mbedtls/ctr_drbg.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/des.c -o mbedtls/des.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/dhm.c -o mbedtls/dhm.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ecdh.c -o mbedtls/ecdh.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ecdsa.c -o mbedtls/ecdsa.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/incIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/variant.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ecjpake.c -o mbedtls/ecjpake.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ecp.c -o mbedtls/ecp.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ecp_curves.c -o mbedtls/ecp_curves.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/entropy.c -o mbedtls/entropy.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/entropy_poll.c -o mbedtls/entropy_poll.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/error.c -o mbedtls/error.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/gcm.c -o mbedtls/gcm.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/havege.c -o mbedtls/havege.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/hmac_drbg.c -o mbedtls/hmac_drbg.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/md.c -o mbedtls/md.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/md2.c -o mbedtls/md2.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/md4.c -o mbedtls/md4.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/mbedtls_md5.c -o mbedtls/mbedtls_md5.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/impl/classinfob.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/impl/choice.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/choice.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
SET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/md_wrap.c -o mbedtls/md_wrap.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/memory_buffer_alloc.c -o mbedtls/memory_buffer_alloc.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/oid.c -o mbedtls/oid.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/padlock.c -o mbedtls/padlock.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pem.c -o mbedtls/pem.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pk.c -o mbedtls/pk.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/choiceptr.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pk_wrap.c -o mbedtls/pk_wrap.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pkcs12.c -o mbedtls/pkcs12.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pkcs5.c -o mbedtls/pkcs5.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pkparse.c -o mbedtls/pkparse.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pkwrite.c -o mbedtls/pkwrite.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/platform.c -o mbedtls/platform.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ripemd160.c -o mbedtls/ripemd160.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/rsa.c -o mbedtls/rsa.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/sha1.c -o mbedtls/sha1.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/sha256.c -o mbedtls/sha256.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/sha512.c -o mbedtls/sha512.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/threading.c -o mbedtls/threading.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/timing.c -o mbedtls/timing.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/impl/ptrinfo.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/impl/aliasinfo.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/aliasinfo.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/mbedtls_version.c -o mbedtls/mbedtls_version.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/version_features.c -o mbedtls/version_features.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/xtea.c -o mbedtls/xtea.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/certs.c -o mbedtls/certs.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pkcs11.c -o mbedtls/pkcs11.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/x509.c -o mbedtls/x509.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/x509_create.c -o mbedtls/x509_create.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/x509_crl.c -o mbedtls/x509_crl.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/x509_crt.c -o mbedtls/x509_crt.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/x509_csr.c -o mbedtls/x509_csr.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/x509write_crt.c -o mbedtls/x509write_crt.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/x509write_csr.c -o mbedtls/x509write_csr.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/debug.c -o mbedtls/debug.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objistr.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/net_sockets.c -o mbedtls/net_sockets.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_cache.c -o mbedtls/ssl_cache.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_ciphersuites.c -o mbedtls/ssl_ciphersuites.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_cli.c -o mbedtls/ssl_cli.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_cookie.c -o mbedtls/ssl_cookie.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_srv.c -o mbedtls/ssl_srv.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/ncbires.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/variant.cpp -o variant.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/choice.cpp -o choice.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/choiceptr.cpp -o choiceptr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/aliasinfo.cpp -o aliasinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objistr.cpp -o objistr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objostr.cpp -o objostr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objcopy.cpp -o objcopy.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objostr.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/cgi/ref_args.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/ref_args.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp -o ncbicgi.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp.cpp -o cgiapp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgictx.cpp -o cgictx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/ncbires.cpp -o ncbires.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/ref_args.cpp -o ref_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbiIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objcopy.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/iterator.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/cgi/cgiapp.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgi_run.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/ld: warning: size of symbol `mbedtls_threading_readdir_mutex' changed from 4 in mbedtls/threading.o to 28 in /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/libmbedcrypto.so
Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_ticket.c -o mbedtls/ssl_ticket.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_tls.c -o mbedtls/ssl_tls.o
/bin/rm -f libxconnect.so .libxconnect.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxconnect.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbi_lbsmd_stub.o ncbi_ansi_ext.o ncbi_buffer.o ncbi_types.o ncbi_priv.o ncbi_core.o ncbi_util.o ncbi_socket.o ncbi_connutil.o ncbi_connection.o ncbi_connector.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_heapmgr.o ncbi_server_info.o ncbi_service.o ncbi_host_info.o ncbi_dispd.o ncbi_service_connector.o ncbi_sendmail.o ncbi_ftp_connector.o ncbi_lb.o ncbi_local.o ncbi_base64.o ncbi_version.o ncbi_lbos.o ncbi_namerd.o parson.o ncbi_ipv6.o ncbi_iprange.o ncbi_localip.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_lbos_cxx.o ncbi_monkey.o ncbi_gnutls.o ncbi_mbedtls.o ncbi_tls.o mbedtls/aes.o mbedtls/aesni.o mbedtls/arc4.o mbedtls/asn1parse.o mbedtls/asn1write.o mbedtls/base64.o mbedtls/bignum.o mbedtls/blowfish.o mbedtls/camellia.o mbedtls/ccm.o mbedtls/cipher.o mbedtls/cipher_wrap.o mbedtls/cmac.o mbedtls/ctr_drbg.o mbedtls/des.o mbedtls/dhm.o mbedtls/ecdh.o mbedtls/ecdsa.o mbedtls/ecjpake.o mbedtls/ecp.o mbedtls/ecp_curves.o mbedtls/entropy.o mbedtls/entropy_poll.o mbedtls/error.o mbedtls/gcm.o mbedtls/havege.o mbedtls/hmac_drbg.o mbedtls/md.o mbedtls/md2.o mbedtls/md4.o mbedtls/mbedtls_md5.o mbedtls/md_wrap.o mbedtls/memory_buffer_alloc.o mbedtls/oid.o mbedtls/padlock.o mbedtls/pem.o mbedtls/pk.o mbedtls/pk_wrap.o mbedtls/pkcs12.o mbedtls/pkcs5.o mbedtls/pkparse.o mbedtls/pkwrite.o mbedtls/platform.o mbedtls/ripemd160.o mbedtls/rsa.o mbedtls/sha1.o mbedtls/sha256.o mbedtls/sha512.o mbedtls/threading.o mbedtls/timing.o mbedtls/mbedtls_version.o mbedtls/version_features.o mbedtls/xtea.o mbedtls/certs.o mbedtls/pkcs11.o mbedtls/x509.o mbedtls/x509_create.o mbedtls/x509_crl.o mbedtls/x509_crt.o mbedtls/x509_csr.o mbedtls/x509write_crt.o mbedtls/x509write_csr.o mbedtls/debug.o mbedtls/net_sockets.o mbedtls/ssl_cache.o mbedtls/ssl_ciphersuites.o mbedtls/ssl_cli.o mbedtls/ssl_cookie.o mbedtls/ssl_srv.o mbedtls/ssl_ticket.o mbedtls/ssl_tls.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxconnect.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxconnect.so
/bin/ln -f .xconnect.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xconnect.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_url.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/ncbi_url.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/cgi/cgi_util.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgi_util.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/serial.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgi_serial.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgi_session.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/cgi/cgi_exception.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgi_exception.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/delaybuf.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager_store.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp_cached.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgi_run.cpp -o cgi_run.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgi_util.cpp -o cgi_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgi_session.cpp -o cgi_session.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/objhook.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/pack_string.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/pack_string.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/exception.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/exception.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objhook.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/stream_utils.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/cgi/ncbicgi.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/cgi/impl/cgi_entry_reader.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/cgi_entry_reader.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/cgi/user_agent.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/user_agent.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/iterator.cpp -o iterator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/serial.cpp -o serial.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/delaybuf.cpp -o delaybuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/pack_string.cpp -o pack_string.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/exception.cpp -o exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objhook.cpp -o objhook.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/oIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objlist.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objstack.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objostrasn.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objistrasn.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objostrasnb.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objistrasnb.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gene_info_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -ldl -lm -lpthread -o gene_info_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f gene_info_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/gene_info_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
cd algo/blast/core/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core TMPL=blast -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:484:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:491:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_OneHit':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:751:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:758:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c: In function 'BLAST_PreliminarySearchEngine':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c:1490:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbCheckOid)lookup_wrap->check_index_oid;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c:1628:22: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
((T_MB_IdxEndSearchIndication)(
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c:1715:10: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
((T_MB_IdxEndSearchIndication)(
^
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c -o aa_ungapped.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_diagnostics.c -o blast_diagnostics.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c -o blast_engine.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_extend.c -o blast_extend.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_filter.c -o blast_filter.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/buibjlist.cpp -o objlist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objstack.cpp -o objstack.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objostrasn.cpp -o objostrasn.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objistrasn.cpp -o objistrasn.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objostrasnb.cpp -o objostrasnb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objistrasnb.cpp -o objistrasnb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objostrxml.cpp -o objostrxml.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUIld/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_lookup.c -o blast_lookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFI/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c: In function 'BlastChooseProteinScanSubject':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c:567:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->scansub_callback = (void *)s_BlastAaScanSubject;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c:570:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->scansub_callback = (void *)s_BlastSmallAaScanSubject;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c:575:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->scansub_callback = (void *)s_BlastCompressedAaScanSubject;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c: In function 'BlastNaHashLookupTableNew':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c:2225:27: warning: ISO C forbids assignment between function pointer and 'void *' [-Wpedantic]
lookup->hash_callback = FNV_hash;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c:2284:49: warning: ISO C forbids passing argument 8 of 'BlastHashLookupIndexQueryExactMatches' between function pointer and 'void *' [-Wpedantic]
lookup->hash_callback,
~~~~~~^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/core/blast_nalookup.h:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/core/blast_lookup.h:181:66: note: expected 'TNaLookupHashFunction' {aka 'unsigned int (*)(unsigned char *, unsigned int)'} but argument is of type 'void *'
TNaLookupHashFunction hash_func,
~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objostrxml.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaChooseScanSubject':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:291:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastNaScanSubject_8_4;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:293:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastNaScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_SmallNaChooseScanSubject':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1320:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_4_1;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1322:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1327:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_5_1;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1329:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1334:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_6_1;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1336:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_6_2;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1338:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1343:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_1;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1345:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_2;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1347:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_3;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1349:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1354:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_8_4;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1360:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1364:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_8_1Mod4;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1368:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_8_2Mod4;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1372:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_8_3Mod4;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_MBChooseScanSubject':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2620:24: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_MB_DiscWordScanSubject_TwoTemplates_1;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2622:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_11_18_1;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2624:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_11_21_1;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2626:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_1;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2634:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_9_1;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2636:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_9_2;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2638:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2643:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_10_1;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2645:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_10_2;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2647:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_10_3;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2649:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2655:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2658:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_11_1Mod4;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2661:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_11_2Mod4;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2664:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_11_3Mod4;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2676:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_BlastNaHashLookupRetieveHits':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2705:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(TNaLookupHashFunction)lookup->hash_callback;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaHashChooseScanSubject':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2978:32: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void*)s_BlastNaHashScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 'BlastChooseNucleotideScanSubjectAny':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2997:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void *)s_BlastNaScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:3000:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:3003:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void*)s_BlastNaHashScanSubject_Any;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:3006:12: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void *)s_MBScanSubject_Any;
^
FSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/cgi/user_agent.cpp -o user_agent.o
/bin/rm -f libxcgi.so .libxcgi.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxcgi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxcgi.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxcgi.so
/bin/ln -f .xcgi.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xcgi.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objistrasnb.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objistrasnb.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::CObjectIStreamAsnBinary::ExpectIndefiniteLength()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
LE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c -o blast_aascan.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c -o blast_nalookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c -o blast_nascan.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_message.c -o blast_message.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_options.c -o blast_options.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_psi.c -o blast_psi.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-b/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 's_IsSeedMasked':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:488:15: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
return !(((T_Lookup_Callback)(lookup_wrap->lookup_callback))
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'BlastNaWordFinder':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1622:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1623:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
extend = (TNaExtendFunction)lookup->extend_callback;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1635:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1636:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
extend = (TNaExtendFunction)lookup->extend_callback;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1643:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1644:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
extend = (TNaExtendFunction)lookup->extend_callback;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1657:23: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'MB_IndexedWordFinder':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1723:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbCheckOid)lookup_wrap->check_index_oid;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1725:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbGetResults)lookup_wrap->read_indexed_db;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'BlastChooseNaExtend':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1795:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup_wrap->lookup_callback = (void *)s_MBLookup;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1799:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendDirect;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1802:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendAligned;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1804:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtend;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1808:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup_wrap->lookup_callback = (void *)s_SmallNaLookup;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1812:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendDirect;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1816:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastSmallNaExtendAlignedOneByte;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1818:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastSmallNaExtend;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1825:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup_wrap->lookup_callback = (void *)s_NaLookup;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1829:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendDirect;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1832:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendAligned;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1834:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtend;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'JumperNaWordFinder':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1974:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1986:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1994:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2001:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2014:23: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'ShortRead_IndexedWordFinder':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2188:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbCheckOid)lookup_wrap->check_index_oid;
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2190:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbGetResults)lookup_wrap->read_indexed_db;
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objistrxml.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
last+-2.7.1/c++/src/algo/blast/core/na_ungapped.c -o na_ungapped.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_psi_priv.c -o blast_psi_priv.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_seg.c -o blast_seg.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_seqsrc.c -o blast_seqsrc.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_setup.c -o blast_setup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_stat.c -o blast_stat.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/us/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c:306:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
else if (strcasecmp("mapper", program) == 0)
^~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c:309:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
return 0;
^~~~~~
ILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/lzo.cpp -o lzo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp -o reader_zlib.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp -o tar.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive.cpp -o archive.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp -o archive_.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o
/bin/rm -f libxcompress.so .libxcompress.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o zlib.o lzo.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxcompress.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxcompress.so
/bin/ln -f .xcompress.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xcompress.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
r/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c -o blast_util.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/greedy_align.c -o greedy_align.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_collector.c -o hspfilter_collector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_besthit.c -o hspfilter_besthit.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_culling.c -o hspfilter_culling.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIF/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c: In function 's_FwdCompareHSPs':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c:133:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
else if (h1->context > h2->context)
^~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c:136:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (h1->query.offset < h2->query.offset)
^~
Y_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c -o link_hsps.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/lookup_util.c -o lookup_util.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/lookup_wrap.c -o lookup_wrap.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/matrix_freq_ratios.c -o matrix_freq_ratios.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/ncbi_std.c -o ncbi_std.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/ncbi_math.c -o ncbi_math.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_encodiIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objostrjson.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ng.c -o blast_encoding.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/pattern.c -o pattern.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/phi_extend.c -o phi_extend.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/phi_gapalign.c -o phi_gapalign.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/phi_lookup.c -o phi_lookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_parameters.c -o blast_parameters.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_posit.c -o blast_posit.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_program.c -o blast_program.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_query_info.c -o blast_query_info.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_tune.c -o blast_tune.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_sw.c -o blast_sw.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_dynarray.c -o blast_dynarray.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/split_query.c -o split_query.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/gencode_singleton.c -o gencode_singleton.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/index_ungapped.c -o index_ungapped.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_traceback_mt_priv.c -o blast_traceback_mt_priv.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_hspstream_mt_utils.c -o blast_hspstream_mt_utils.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/boost_erf.c -o boost_erf.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/jumper.c -o jumper.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_mapper.c -o hspfilteIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objistrjson.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
r_mapper.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/core/spliced_hits.c -o spliced_hits.o
/bin/rm -f libblast.so .libblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC aa_ungapped.o blast_diagnostics.o blast_engine.o blast_extend.o blast_filter.o blast_gapalign.o blast_hits.o blast_hspstream.o blast_itree.o blast_kappa.o blast_lookup.o blast_aalookup.o blast_aascan.o blast_nalookup.o blast_nascan.o blast_message.o blast_options.o blast_psi.o na_ungapped.o blast_psi_priv.o blast_seg.o blast_seqsrc.o blast_setup.o blast_stat.o blast_traceback.o blast_util.o gapinfo.o greedy_align.o hspfilter_collector.o hspfilter_besthit.o hspfilter_culling.o link_hsps.o lookup_util.o lookup_wrap.o matrix_freq_ratios.o ncbi_std.o ncbi_math.o blast_encoding.o pattern.o phi_extend.o phi_gapalign.o phi_lookup.o blast_parameters.o blast_posit.o blast_program.o blast_query_info.o blast_tune.o blast_sw.o blast_dynarray.o split_query.o gencode_singleton.o index_ungapped.o blast_traceback_mt_priv.o blast_hspstream_mt_utils.o boost_erf.o jumper.o hspfilter_mapper.o spliced_hits.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lcomposition_adjustment -lxconnect -ltables -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblast.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast.so
/bin/ln -f .blast.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.blast.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serializable.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/serializable.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/serialobject.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/impl/pathhook.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/pathhook.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/rpcbase.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
LD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objistrxml.cpp -o objistrxml.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objostrjson.cpp -o objostrjson.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/objistrjson.cpp -o objistrjson.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/serializable.cpp -o serializable.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/serialobject.cpp -o serialobject.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/pathhook.cpp -o pathhook.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/rpcbase.cpp -o rpcbase.o
/bin/rm -f libxser.so .libxser.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxser.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC hookdata.o hookdatakey.o typeinfo.o objectinfo.o objectiter.o objectio.o typeref.o typemap.o stdtypes.o enumerated.o ptrinfo.o autoptrinfo.o continfo.o stltypes.o memberid.o memberlist.o item.o classinfob.o member.o classinfo.o variant.o choice.o choiceptr.o aliasinfo.o objistr.o objostr.o objcopy.o iterator.o serial.o delaybuf.o pack_string.o exception.o objhook.o objlist.o objstack.o objostrasn.o objistrasn.o objostrasnb.o objistrasnb.o objostrxml.o objistrxml.o objostrjson.o objistrjson.o serializable.o serialobject.o pathhook.o rpcbase.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxser.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxser.so
/bin/ln -f .xser.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xser.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
cd serial/datatool/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=datatool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool TMPL=datatool -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/namespace.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/statictype.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/statictype.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumtype.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumtype.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.cpp -o datatool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.cpp -o type.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/namespace.cpp -o namespace.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/statictype.cpp -o statictype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumtype.cpp -o enumtype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.cpp -o reftype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/impl/stltypes.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/unitype.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/impl/stltypes.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/unitype.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/blocktype.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/blocktype.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicetype.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicetype.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/ptrstr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/ptrstr.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/stdstr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/stdstr.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
IFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/unitype.cpp -o unitype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/blocktype.cpp -o blocktype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicetype.cpp -o choicetype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.cpp -o typestr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/ptrstr.cpp -o ptrstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/stdstr.cpp -o stdstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/classstr.cpp -o classstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstaIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/classstr.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumstr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumstr.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/stlstr.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/stlstr.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicestr.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/classstr.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicestr.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/choiceptrstr.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/value.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/value.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/mcontainer.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/mcontainer.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ck-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumstr.cpp -o enumstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/stlstr.cpp -o stlstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicestr.cpp -o choicestr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/choiceptrstr.cpp -o choiceptrstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/value.cpp -o value.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/mcontainer.cpp -o mcontainer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/module.cpp -o module.o
/usr/bin/g++ -std=gnu++11 -c -WaIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/module.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/module.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/moduleset.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/moduleset.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/generate.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/filecode.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/generate.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/filecode.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/code.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/code.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/fileutil.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
ll -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/moduleset.cpp -o moduleset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/generate.cpp -o generate.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/filecode.cpp -o filecode.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/code.cpp -o code.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/fileutil.cpp -o fileutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.cpp -o alexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/aparser.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/aparser.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/parser.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/parser.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/lexer.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/lexer.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/comments.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp:66:50: note: in expansion of macro 'THROWS'
CDataType* CResolvedTypeSet::GetType(void) const THROWS((CDatatoolException))
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/srcutil.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/aparser.cpp -o aparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/parser.cpp -o parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/lexer.cpp -o lexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp -o exceptions.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/comments.cpp -o comments.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/srcutil.cpp -o srcutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdaux.cpp -o dtdaux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdaux.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdaux.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdparser.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdparser.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/rpcgen.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/rpcgen.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdlexer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdlexer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
IFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.cpp -o dtdlexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdparser.cpp -o dtdparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/rpcgen.cpp -o rpcgen.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.cpp -o aliasstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdlexer.cpp -o xsdlexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdparser.cpp -o xsdparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdllexer.cpp -o wsdllexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.speIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdlexer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdllexer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdllexer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdparser.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdparser.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlparser.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlparser.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdlexer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdlexer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlstr.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlstr.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdparser.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdparser.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
cs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlparser.cpp -o wsdlparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlstr.cpp -o wsdlstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdlexer.cpp -o jsdlexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdparser.cpp -o jsdparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_pattern_match_callback.cpp -o traversal_pattern_match_callback.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_code_generator.cpp -o traversal_code_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blastIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_pattern_match_callback.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_pattern_match_callback.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_code_generator.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_node.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_merger.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_merger.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_node.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_spec_file_parser.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_spec_file_parser.cpp:187:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+-2.7.1/c++/src/serial/datatool/traversal_merger.cpp -o traversal_merger.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o jsdlexer.o jsdparser.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread -o datatool
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f datatool /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
cd objects/general/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd objects/biblio/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd objects/medline/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd objects/pub/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh pub all
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh biblio all
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh medline all
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh general all
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pub -or objects/pub -odi -od pub.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medline -or objects/medline -odi -od medline.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m general.asn -M "" -oA -oc general -or objects/general -odi -od general.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd general.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m biblio.asn -M "objects/general/general.asn" -oA -oc biblio -or objects/biblio -odi -od biblio.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
/usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pub -or objects/pub -odi -od pub.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
cd objects/seqcode/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m general.asn -M "" -oA -oc general -or objects/general -odi -od general.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd general.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medline -or objects/medline -odi -od medline.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m biblio.asn -M "objects/general/general.asn" -oA -oc biblio -or objects/biblio -odi -od biblio.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
cd objects/seq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd objects/seqset/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd objects/scoremat/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqcode all
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqset all
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh scoremat all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/Makefile.sources builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -w -j4 --jobserver-auth=9,10 all
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqcode.asn -M "" -oA -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv7l -- please fix me
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA -oc seqset -or objects/seqset -odi -od seqset.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset'
make[7]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
/usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
/usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'.
Platform not defined for Linux armv7l -- please fix me
make[7]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv7l -- please fix me
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
status=0 ; \
MAKE="/usr/bin/make -w -j4 --jobserver-auth=12,14"; \
export MAKE; \
for x in seqalign seqblock seqfeat seqloc seqres seqtable; do \
d=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../$x ; \
(cd $d && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh) || status=9 ; \
test -f ${x}__.cpp || \
echo "#include \"../$x/${x}__.cpp\"" > ${x}__.cpp ; \
test -f ${x}___.cpp || \
echo "#include \"../$x/${x}___.cpp\"" > ${x}___.cpp ; \
done ; \
exit $status
/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqalign MODULE_PATH=objects/seqalign MODULE_ASN=seqalign.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqalign'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqalign.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqalign -or objects/seqalign -odi -od seqalign.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqalign.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqalign'
/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqblock MODULE_PATH=objects/seqblock MODULE_ASN=seqblock.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqblock'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqblock.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqblock -or objects/seqblock -odi -od seqblock.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqblock.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqblock'
/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqfeat MODUmake[7]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv7l -- please fix me
make[7]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv7l -- please fix me
LE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqfeat.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn" -oA -oc seqfeat -or objects/seqfeat -odi -od seqfeat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqfeat.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat'
/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqloc MODULE_PATH=objects/seqloc MODULE_ASN=seqloc.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqloc.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn" -oA -oc seqloc -or objects/seqloc -odi -od seqloc.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqloc.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc'
/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILDmake[7]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv7l -- please fix me
make[7]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqcode.asn -M "" -oA -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
cd objects/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA -oc seqset -or objects/seqset -odi -od seqset.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
cd objects/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
cd objects/genomecoll/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blastdb all
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh genome_collection all
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blast all
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh gencoll_client all
Waiting for /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/make_asn.lock/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA -oc blast -or objects/blast -odi -od blast.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'.
/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqres'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqres -or objects/seqres -odi -od seqres.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqres'
/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqtable'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqtable'
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seq all
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqblock/seqblock.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA -oc seq -or objects/seq -odi -od seq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
cd objects/seqedit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA -oc blast -or objects/blast -odi -od blast.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
cd objects/seqsplit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqedit all
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqsplit all
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
.
Acquired /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/make_asn.lock for PID 13795 (make_asn)
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/make[4] (Makefile.genome_collection.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/make[4] (Makefile.gencoll_client.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqblock/seqblock.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA -oc seq -or objects/seq -odi -od seq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
cd objects/submit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh submit all
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA -oc submit -or objects/submit -odi -od submit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
/usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
cd objects/variation/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
cd objects/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1 && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh id1 all
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh variation all
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
cd objects/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA -oc id1 -or objects/id1 -odi -od id1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id1.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1'
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2 && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh id2 all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA -oc variation -or objects/variation -odi -od variation.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation'
/usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'.
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA -oc id2 -or objects/id2 -odi -od id2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
/usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
/usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA -oc submit -or objects/submit -odi -od submit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
cd objects/taxon1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1 && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh taxon1 all
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
/usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA -oc id1 -or objects/id1 -odi -od id1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id1.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
cd objects/blastxml/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA -oc variation -or objects/variation -odi -od variation.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
cd objects/blastxml2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blastxml all
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2 && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blastxml2 all
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
File blastxml.module not found. Using defaults...
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m blastxml.asn -M "" -oA -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA -oc id2 -or objects/id2 -odi -od id2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
cd objects/entrez2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
File blastxml2.module not found. Using defaults...
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m blastxml2.asn -M "" -oA -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2 && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh entrez2 all
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
/usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'.
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m entrez2.asn -M "" -oA -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
cd objects/gbseq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh gbseq all
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m gbseq.asn -M "" -oA -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
/usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'.
File blastxml.module not found. Using defaults...
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m blastxml.asn -M "" -oA -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
cd objects/medlars/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh medlars all
File blastxml2.module not found. Using defaults...
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m blastxml2.asn -M "" -oA -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
cd objects/pubmed/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh pubmed all
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medlars -or objects/medlars -odi -od medlars.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medlars.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m entrez2.asn -M "" -oA -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
cd objects/mla/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.medlars.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
/usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh mla all
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA -oc mla -or objects/mla -odi -od mla.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m gbseq.asn -M "" -oA -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
cd objects/taxon3/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3 && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh taxon3 all
Platform not defined for Linux armv7l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medlars -or objects/medlars -odi -od medlars.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medlars.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
cd objects/valid/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid && /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh valid all
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
cd objects/general/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general TMPL=general -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m valid.asn -M "" -oA -oc valid -or objects/valid -odi -od valid.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
/usr/bin/make[4] (Makefile.valid.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed.asn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA -oc mla -or objects/mla -odi -od mla.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
cd objects/seqcode/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode TMPL=seqcode -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
cd objects/blastxml/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml TMPL=blastxml -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src -m valid.asn -M "" -oA -oc valid -or objects/valid -odi -od valid.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
cd objects/blastxml2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/Date_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/Date.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode/Seq_code_set_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/objectinfo.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/general/uoconv.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/uoconv.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqcode/Seq_code_set_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqcode/Seq_code_set.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode/Seq_code_set.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml/BlastOutput_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blastxml/BlastOutput_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blastxml/BlastOutput.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml/BlastOutput.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blastxml2/BlastOutput2_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blastxml2/BlastOutput2.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/BlastOutput2.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/BlastOutput2_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/objectinfo.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/general/uoconv.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/uoconv.cpp:36:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode__.cpp -o seqcode__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o
/bin/rm -f libseqcode.so .libseqcode.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqcode.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqcode__.o seqcode___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqcode.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqcode.so
/bin/ln -f .seqcode.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.seqcode.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
cd objects/entrez2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2 TMPL=entrez2 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml__.cpp -o blastxml__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o
/bin/rm -f libblastxml.so .libblastxml.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastxml.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastxml__.o blastxml___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastxml.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastxml.so
/bin/ln -f .blastxml.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.blastxml.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
cd objects/gbseq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq TMPL=gbseq -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/entrez2/E2Reply_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/entrez2/E2Reply.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2/E2Reply.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2/E2Reply_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq/GBAltSeqData_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/gbseq/GBAltSeqData_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/gbseq/GBAltSeqData.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq/GBAltSeqData.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'ncbi::CRef<ncbi::objects::CUser_field> ncbi::objects::s_PackAsUserField(ncbi::CConstObjectInfo, const string*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2__.cpp -o blastxml2__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2___.cpp -o blastxml2___.o
/bin/rm -f libblastxml2.so .libblastxml2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastxml2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastxml2__.o blastxml2___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastxml2.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastxml2.so
/bin/ln -f .blastxml2.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.blastxml2.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2__.cpp -o entrez2__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2___.cpp -o entrez2___.o
/bin/rm -f libentrez2.so .libentrez2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libentrez2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC entrez2__.o entrez2___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libentrez2.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libentrez2.so
/bin/ln -f .entrez2.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.entrez2.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
cd objects/entrez2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2 TMPL=entrez2cli -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general__.cpp -o general__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/general___.cpp -o general___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/general/uoconv.cpp -o uoconv.o
/bin/rm -f libgeneral.so .libgeneral.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgeneral.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC general__.o general___.o uoconv.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libgeneral.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libgeneral.so
/bin/ln -f .general.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.general.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
cd objects/biblio/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=biblio UNIX_PROJ="" sources= configurables=configurables.null
cd objects/valid/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=valid UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio TMPL=biblio -w -j4 --jobserver-auth=7,8 all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid TMPL=valid -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o
/bin/rm -f libgbseq.so .libgbseq.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgbseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gbseq__.o gbseq___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libgbseq.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libgbseq.so
/bin/ln -f .gbseq.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.gbseq.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/biblio/citation_base.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/citation_base.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client_.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/entrez2/entrez2_client_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/entrez2/entrez2_client.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client.cpp:42:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid/Comment_rule_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid/valid___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/biblio/Affil_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/biblio/Affil.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/Affil.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid/Comment_rule.cpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid/valid__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/Affil_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid/valid__.cpp:3:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid/Comment_set.cpp: In static member function 'static std::vector<std::__cxx11::basic_string<char> > ncbi::objects::CComment_set::GetFieldNames(const string&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid/Comment_set.cpp:158:18: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException ) {
^~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client_.cpp -o entrez2_client_.o
/bin/rm -f libentrez2cli.so .libentrez2cli.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libentrez2cli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC entrez2_client.o entrez2_client_.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lentrez2 -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2cli.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libentrez2cli.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libentrez2cli.so
/bin/ln -f .entrez2cli.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.entrez2cli.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid/valid__.cpp -o valid__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/valid/valid___.cpp -o valid___.o
/bin/rm -f libvalid.so .libvalid.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libvalid.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC valid__.o valid___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lgeneral -lxser -lxregexp -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libvalid.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libvalid.so
/bin/ln -f .valid.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.valid.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio__.cpp -o biblio__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio___.cpp -o biblio___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/biblio/citation_base.cpp -o citation_base.o
/bin/rm -f libbiblio.so .libbiblio.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libbiblio.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC biblio__.o biblio___.o citation_base.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lgeneral -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libbiblio.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libbiblio.so
/bin/ln -f .biblio.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.biblio.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
cd objects/medline/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null
cd objects/medlars/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars TMPL=medlars -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline TMPL=medline -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/medlars/Medlars_entry_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/medlars/Medlars_entry.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars/Medlars_entry.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/DocRef_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/medline/DocRef_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/medline/DocRef.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/DocRef.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars/Medlars_entry_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars__.cpp -o medlars__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars___.cpp -o medlars___.o
/bin/rm -f libmedlars.so .libmedlars.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmedlars.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC medlars__.o medlars___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lbiblio -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libmedlars.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libmedlars.so
/bin/ln -f .medlars.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.medlars.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline__.cpp -o medline__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/medline/medline___.cpp -o medline___.o
/bin/rm -f libmedline.so .libmedline.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmedline.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC medline__.o medline___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lbiblio -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libmedline.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libmedline.so
/bin/ln -f .medline.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.medline.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
cd objects/pub/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null
cd objects/pubmed/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub TMPL=pub -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed TMPL=pubmed -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub/Pub_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub/pub___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/pubmed/Pubmed_entry_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/pubmed/Pubmed_entry.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed/Pubmed_entry.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/pub/Pub_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/pub/Pub.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub/Pub.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub/pub__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed/Pubmed_entry_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed__.cpp -o pubmed__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed___.cpp -o pubmed___.o
/bin/rm -f libpubmed.so .libpubmed.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libpubmed.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC pubmed__.o pubmed___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lmedline -lbiblio -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libpubmed.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libpubmed.so
/bin/ln -f .pubmed.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.pubmed.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub/pub__.cpp -o pub__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/pub/pub___.cpp -o pub___.o
/bin/rm -f libpub.so .libpub.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libpub.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC pub__.o pub___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lmedline -lbiblio -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libpub.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libpub.so
/bin/ln -f .pub.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.pub.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
cd objects/seq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null
cd objects/mla/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla TMPL=mla -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq TMPL=seq -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla/Error_val_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla/mla___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/mla/Error_val_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/mla/Error_val.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla/Error_val.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla/mla__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqblock/EMBL_block_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqblock/EMBL_block.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqblock/EMBL_block.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqblock/seqblock__.cpp:2,
from seqblock__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_diag_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_diag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Dense_diag.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:2,
from seqalign__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9,
from seqalign__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp: In member function 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1381:69: warning: 'void ncbi::objects::CDense_seg::RemapToLoc(ncbi::objects::CDense_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations]
SetSegs().SetDenseg().RemapToLoc(row, dst_loc, ignore_strand);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:3,
from seqalign__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Dense_seg.cpp:909:6: note: declared here
void CDense_seg::RemapToLoc(TDim row, const CSeq_loc& loc,
^~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9,
from seqalign__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1385:62: warning: 'void ncbi::objects::CStd_seg::RemapToLoc(ncbi::objects::CStd_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations]
(*std_it)->RemapToLoc(row, dst_loc, ignore_strand);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9,
from seqalign__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Std_seg.hpp:79:26: note: declared here
NCBI_DEPRECATED void RemapToLoc(TDim row,
^~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9,
from seqalign__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1390:68: warning: 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations]
(*seq_align_it)->RemapToLoc(row, dst_loc, ignore_strand);
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1364:6: note: declared here
void CSeq_align::RemapToLoc(TDim row,
^~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Giimport_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Giimport_id.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqloc/Giimport_id.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqloc/seqloc__.cpp:2,
from seqloc__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:30,
from seqfeat__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp: In static member function 'static bool ncbi::objects::CPCRPrimerSeq::Fixi(std::__cxx11::string&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp:249:72: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations]
pos = NStr::Find(seq, "i", pos, NPOS, NStr::eFirst, NStr::eCase);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here
SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern,
^~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:30,
from seqfeat__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp:249:72: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations]
pos = NStr::Find(seq, "i", pos, NPOS, NStr::eFirst, NStr::eCase);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here
SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern,
^~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla/mla__.cpp -o mla__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla/mla___.cpp -o mla___.o
/bin/rm -f libmla.so .libmla.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmla.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mla__.o mla___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lmedlars -lpub -lpubmed -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libmla.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libmla.so
/bin/ln -f .mla.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.mla.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
cd objects/mla/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mlacli UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla TMPL=mlacli -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:42,
from seqfeat__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'ncbi::CTempString ncbi::objects::s_AaName(int)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:124:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare]
if (idx > 0 && idx < ArraySize(sc_TrnaList)) {
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp:246:69: note: in expansion of macro 'THROWS'
CRef<CDate> CSubSource::DateFromCollectionDate (const string& test) THROWS((CException))
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:48,
from seqfeat__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp: In static member function 'static void ncbi::objects::CSubSource::IsCorrectDateFormat(const string&, bool&, bool&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp:446:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException ) {
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp: In static member function 'static size_t ncbi::objects::CSubSource::CheckDateFormat(const string&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp:468:22: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException) {
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp:498:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException) {
^~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/mla/mla_client_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/mla/mla_client.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client.cpp:41:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client_.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq__.cpp -o seq__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include seqalign__.cpp -o seqalign__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include seqblock__.cpp -o seqblock__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include seqfeat__.cpp -o seqfeat__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include seqloc__.cpp -o seqloc__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blmake[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client.cpp -o mla_client.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o
/bin/rm -f libmlacli.so .libmlacli.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmlacli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mla_client.o mla_client_.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lmla -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libmlacli.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libmlacli.so
/bin/ln -f .mlacli.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.mlacli.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqres/Byte_graph_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqres/Byte_graph.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/Byte_graph.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/seqres__.cpp:2,
from seqres__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable__.cpp:2,
from seqtable__.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable__.cpp:2,
from seqtable__.cpp:1:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable__.cpp:2,
from seqtable__.cpp:1:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::objects::CSeqTable_multi_data::ChangeToInt8()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::objects::CSeqTable_multi_data::ChangeToInt_scaled(int, int)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Dense_diag_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign___.cpp:2,
from seqalign___.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqblock/EMBL_block_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqblock/seqblock___.cpp:2,
from seqblock___.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include seqres__.cpp -o seqres__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include seqtable__.cpp -o seqtable__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq___.cpp -o seq___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include seqalign___.cpp -o seqalign___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include seqblock___.cpp -o seqblock___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include seqfeat___.cpp -o seqfeat___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbiIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat___.cpp:2,
from seqfeat___.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqloc/Giimport_id_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqloc/seqloc___.cpp:2,
from seqloc___.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat___.cpp:2,
from seqfeat___.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/Byte_graph_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/seqres___.cpp:2,
from seqres___.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable___.cpp:2,
from seqtable___.cpp:1:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_data_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_data.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seqport_util.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seqport_util.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_tree.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_handle.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_tree.cpp: In member function 'virtual void ncbi::objects::CSeq_id_Giim_Tree::FindMatchStr(const string&, ncbi::objects::CSeq_id_Which_Tree::TSeq_id_MatchList&) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_tree.cpp:2432:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include seqloc___.cpp -o seqloc___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include seqres___.cpp -o seqres___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include seqtable___.cpp -o seqtable___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seqport_util.cpp -o seqport_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_tree.cpp -o seq_id_tree.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/srIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_mapper.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_mapper.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_loc_mapper_base.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_mapper_base.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_align_mapper_base.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seqlocinfo.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seqlocinfo.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstStd(ncbi::CRef<ncbi::objects::CSeq_align>&) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp:1505:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
if ( row_n == p_row ) {
~~~~~~^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstDisc(ncbi::CRef<ncbi::objects::CSeq_align>&) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp:1651:16: warning: catching polymorphic type 'class ncbi::objects::CAnnotMapperException' by value [-Wcatch-value=]
catch (CAnnotMapperException) {
^~~~~~~~~~~~~~~~~~~~~
c/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp -o seq_align_mapper_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seqlocinfo.cpp -o seqlocinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/sofa_map.cpp -o sofa_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/so_map.cpp In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SeqFeatData_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SeqFeatData.hpp:93,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/sofa_type.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/sofa_map.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SeqFeatData_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SeqFeatData.hpp:93,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/so_map.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_loc_mapper_base.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_mapper_base.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_loc_mapper_base.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_mapper_base.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::objects::CSeq_graph> ncbi::objects::CSeq_loc_Mapper_Base::Map(const ncbi::objects::CSeq_graph&)':
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
_M_range_insert(__pos, __first, __last,
^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_from_string.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_loc_reverse_complementer.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_reverse_complementer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-o so_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_from_string.cpp -o seq_loc_from_string.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_reverse_complementer.cpp -o seq_loc_reverse_complementer.o
/bin/rm -f libseq.so .libseq.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq__.o seqalign__.o seqblock__.o seqfeat__.o seqloc__.o seqres__.o seqtable__.o seq___.o seqalign___.o seqblock___.o seqfeat___.o seqloc___.o seqres___.o seqtable___.o seqport_util.o seq_id_tree.o seq_id_handle.o seq_id_mapper.o seq_loc_mapper_base.o seq_align_mapper_base.o seqlocinfo.o sofa_map.o so_map.o seq_loc_from_string.o seq_loc_reverse_complementer.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqcode -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseq.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libseq.so
/bin/ln -f .seq.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.seq.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
cd objects/seqset/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null
cd objects/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null
cd objects/genomecoll/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null
cd objects/variation/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb TMPL=blastdb -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset TMPL=seqset -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation TMPL=variation -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll TMPL=genome_collection -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blastdb/Blast_db_mask_info_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blastdb/Blast_db_mask_info.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb/Blast_db_mask_info.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/Bioseq_set_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb/Blast_db_mask_info_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqset/gb_release_file.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/gb_release_file.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/GC_Assemblies.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/variation/VariantPlacement_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/variation/VariantPlacement.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation/VariantPlacement.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation/variation__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/GC_Assemblies_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation/VariantPlacement_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation/variation___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serial.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/Bioseq_set.cpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/GC_Assemblies.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation/VariantPlacement_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation/variation___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb__.cpp -o blastdb__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb___.cpp -o blastdb___.o
/bin/rm -f libblastdb.so .libblastdb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastdb__.o blastdb___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastdb.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastdb.so
/bin/ln -f .blastdb.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.blastdb.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
cd objects/taxon1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1 TMPL=taxon1 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/Taxon1_data.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/Taxon1_data_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serial.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/cache.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serial.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/cache.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation/variation__.cpp -o variation__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/variation/variation___.cpp -o variation___.o
/bin/rm -f libvariation.so .libvariation.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libvariation.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC variation__.o variation___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libvariation.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libvariation.so
/bin/ln -f .variation.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.variation.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
cd objects/taxon3/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3 TMPL=taxon3 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset__.cpp -o seqset__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset___.cpp -o seqset___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqset/gb_release_file.cpp -o gb_release_file.o
/bin/rm -f libseqset.so .libseqset.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqset.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqset__.o seqset___.o gb_release_file.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lseqcode -lsequtil -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqset.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqset.so
/bin/ln -f .seqset.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.seqset.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
cd objects/scoremat/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat TMPL=scoremat -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/utils.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection__.cpp -o genome_collection__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o
/bin/rm -f libgenome_collection.so .libgenome_collection.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgenome_collection.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC genome_collection__.o genome_collection___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libgenome_collection.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libgenome_collection.so
/bin/ln -f .genome_collection.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.genome_collection.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
cd objects/seqedit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit TMPL=seqedit -w -j4 --jobserver-auth=7,8 all
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat/BlockProperty_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/BlockProperty_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/BlockProperty.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat/BlockProperty.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/utils.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqedit/SeqEdit_Cmd_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqedit/SeqEdit_Cmd.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit/SeqEdit_Cmd.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit/SeqEdit_Cmd_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1__.cpp -o taxon1__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1___.cpp -o taxon1___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1.cpp -o taxon1.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/cache.cpp -o cache.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/utils.cpp -o utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o
/bin/rm -f libtaxon1.so .libtaxon1.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtaxon1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtaxon1.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libtaxon1.so
/bin/ln -f .taxon1.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.taxon1.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
cd objects/seqsplit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit TMPL=seqsplit -w -j4 --jobserver-auth=7,8 all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o
/bin/rm -f libscoremat.so .libscoremat.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libscoremat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC scoremat__.o scoremat___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libscoremat.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libscoremat.so
/bin/ln -f .scoremat.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.scoremat.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
cd objects/submit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit TMPL=submit -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3__.cpp -o taxon3__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3___.cpp -o taxon3___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o
/bin/rm -f libtaxon3.so .libtaxon3.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtaxon3.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC taxon3__.o taxon3___.o taxon3.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtaxon3.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libtaxon3.so
/bin/ln -f .taxon3.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.taxon3.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
cd objects/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1 TMPL=id1 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/submit/Contact_info_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/submit/Contact_info.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit/Contact_info.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit/submit__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit/Contact_info_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit/submit___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/ID2S_Bioseq_Ids_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqsplit/ID2S_Bioseq_Ids_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqsplit/ID2S_Bioseq_Ids.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/ID2S_Bioseq_Ids.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/id1/Entry_complexities_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/id1/Entry_complexities.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1/Entry_complexities.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1/id1__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1/Entry_complexities_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1/id1___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o
/bin/rm -f libseqedit.so .libseqedit.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqedit__.o seqedit___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqedit.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqedit.so
/bin/ln -f .seqedit.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.seqedit.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
cd objects/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast TMPL=blast -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit/submit__.cpp -o submit__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/submit/submit___.cpp -o submit___.o
/bin/rm -f libsubmit.so .libsubmit.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libsubmit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC submit__.o submit___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lbiblio -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libsubmit.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libsubmit.so
/bin/ln -f .submit.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.submit.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
cd objtools/readers/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjread UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers TMPL=xobjread -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1/id1__.cpp -o id1__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id1/id1___.cpp -o id1___.o
/bin/rm -f libid1.so .libid1.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libid1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC id1__.o id1___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libid1.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libid1.so
/bin/ln -f .id1.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.id1.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blast/NCBI_Blast4_module.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blast/names.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast/names.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blast/Blas_get_searc_resul_reply_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blast/Blas_get_searc_resul_reply.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast/Blas_get_searc_resul_reply.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast/blast__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast/Blas_get_searc_resul_reply_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast/blast___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/acc_pattern.cpp:43:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/read_util.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/format_guess_ex.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp: In function 'ncbi::CRef<ncbi::objects::CBioseq_set> ncbi::AgpRead(ncbi::CNcbiIstream&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:58:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CSeq_entry> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated [-Wdeprecated-declarations]
AgpRead(is, entries, component_id_rule, set_gap_data, component_types);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:61:6: note: declared here
void AgpRead(CNcbiIstream& is,
^~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:58:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CSeq_entry> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated [-Wdeprecated-declarations]
AgpRead(is, entries, component_id_rule, set_gap_data, component_types);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:61:6: note: declared here
void AgpRead(CNcbiIstream& is,
^~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/acc_pattern.cpp:43:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp: In function 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CSeq_entry> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:74:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CBioseq> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated [-Wdeprecated-declarations]
AgpRead(is, bioseqs, component_id_rule, set_gap_data, component_types);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here
void AgpRead(CNcbiIstream& is,
^~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:74:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CBioseq> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated [-Wdeprecated-declarations]
AgpRead(is, bioseqs, component_id_rule, set_gap_data, component_types);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here
void AgpRead(CNcbiIstream& is,
^~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'std::map<std::__cxx11::basic_string<char>, ncbi::CPatternStats*>::iterator ncbi::CAccPatternCounter::AddName(const string&, ncbi::CAccPatternCounter::TDoubleVec*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/format_guess_ex.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_seq_entry.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_seq_entry.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_util.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit__.cpp -o seqsplit__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o
/bin/rm -f libseqsplit.so .libseqsplit.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqsplit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqsplit__.o seqsplit___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqsplit.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqsplit.so
/bin/ln -f .seqsplit.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.seqsplit.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
cd objmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null
cd objects/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2 TMPL=id2 -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr TMPL=objmgr -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/read_util.cpp -o read_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/format_guess_ex.cpp -o format_guess_ex.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/acc_pattern.cpp -o acc_pattern.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp -o agp_read.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_seq_entry.cpp -o agp_seq_entry.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_util.cpp -o agp_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_info.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2/ID2S_Reply_Get_Chunk_.cpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2/id2___.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_annot_info.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_info.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/objmgr_exception.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_setters.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/table_field.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/id2/ID2S_Reply_Get_Chunk_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/id2/ID2S_Reply_Get_Chunk.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2/ID2S_Reply_Get_Chunk.cpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2/id2__.cpp:2:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_validate_reader.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_validate_reader.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/aln_reader.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_validate_reader.cpp: In member function 'virtual void ncbi::CAgpValidateReader::OnObjectChange()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_validate_reader.cpp:562:28: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
catch(CException e){
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/objmgr_exception.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_setters.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_info.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/table_field.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/bed_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_annot_info.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_info.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/aln_reader.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp: In member function 'bool ncbi::CAlnReader::x_IsGap(ncbi::CAlnReader::TNumrow, ncbi::TSeqPos, const string&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp:409:13: warning: comparison of integer expressions of different signedness: 'ncbi::CAlnReader::TNumrow' {aka 'int'} and 'std::vector<std::pair<unsigned int, unsigned int> >::size_type' {aka 'unsigned int'} [-Wsign-compare]
if (row > m_MiddleSections.size()) {
~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/bed_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/cigar.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/cigar.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map_switch.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_switch.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_setters.cpp -o seq_table_setters.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_info.cpp -o seq_table_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_info.cpp -o seq_annot_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/table_field.cpp -o table_field.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE FFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/bed_reader.cpp -o bed_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/cigar.cpp -o cigar.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp -o fasta.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_reader_utils.cpp -o fasta_reader_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2/id2__.cpp -o id2__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/id2/id2___.cpp -o id2___.o
/bin/rm -f libid2.so .libid2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libid2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC id2__.o id2___.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqsplit -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libid2.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libid2.so
/bin/ln -f .id2.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.id2.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/snp_annot_info.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_types_ci.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_aln_builder.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_aln_builder.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_reader_utils.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/getfeature.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_reader_utils.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/gff_reader.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/track_data.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(ncbi::ILineReader&, ncbi::objects::CFastaReader::TFlags)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_loc_cvt.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_cvt.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(ncbi::CNcbiIstream&, ncbi::objects::CFastaReader::TFlags)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(const string&, ncbi::objects::CFastaReader::TFlags)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(ncbi::objects::CReaderBase::TReaderFlags, ncbi::objects::CFastaReader::TFlags)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In destructor 'virtual ncbi::objects::CFastaReader::~CFastaReader()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:260:33: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
CFastaReader::~CFastaReader(void)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:260:33: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
CFastaReader::~CFastaReader(void)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In member function 'virtual void ncbi::objects::CFastaReader::ParseDefLine(const TStr&, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:621:9: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_ExpectedEnd = range_end - range_start;
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:621:9: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_ExpectedEnd = range_end - range_start;
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/gff_reader.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/annot_name.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/annot_selector.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_selector.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_descr_ci.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_data.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/microarray_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast/blast__.cpp -o blast__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast/blast___.cpp -o blast___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast/names.cpp -o names.o
/bin/rm -f libxnetblast.so .libxnetblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxnetblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast__.o blast___.o names.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lscoremat -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxnetblast.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxnetblast.so
/bin/ln -f .xnetblast.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xnetblast.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
cd objects/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast TMPL=xnetblastcli -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/feat_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/feat_ci.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/microarray_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blast/blastclient_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blast/blastclient.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient.cpp:41:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient_.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/phrap.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/graph_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/graph_ci.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:227:5: note: in expansion of macro 'THROWS'
THROWS((CBlastException))
^~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/graph_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/graph_ci.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/graph_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/graph_ci.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::objects::CMappedGraph::MakeMappedGraphData(ncbi::objects::CSeq_graph&) const':
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
_M_range_insert(__pos, __first, __last,
^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::objects::SFastaFileMap::SFastaEntry&}; _Tp = ncbi::objects::SFastaFileMap::SFastaEntry; _Alloc = std::allocator<ncbi::objects::SFastaFileMap::SFastaEntry>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::SFastaFileMap::SFastaEntry>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::objects::SFastaFileMap::SFastaEntry*, std::vector<ncbi::objects::SFastaFileMap::SFastaEntry> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
-Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_types_ci.cpp -o annot_types_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_cvt.cpp -o seq_loc_cvt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_selector.cpp -o annot_selector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_descr_ci.cpp -o seq_descr_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/feat_ci.cpp -o feat_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/graph_ci.cpp -o graph_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object.cpp -o annot_object.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compilpthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/getfeature.cpp -o getfeature.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff_reader.cpp -o gff_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/track_data.cpp -o track_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_data.cpp -o reader_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/microarray_reader.cpp -o microarray_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/phrap.cpp -o phrap.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o
/bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp
ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblast_unit_test_util.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast_unit_test_util.a
/bin/ln -f .blast_unit_test_util.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.blast_unit_test_util.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j4 --jobserver-auth=7,8 all
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient.cpp -o blastclient.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o
/bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxnetblastcli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastclient.o blastclient_.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxnetblast -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxnetblastcli.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxnetblastcli.so
/bin/ln -f .xnetblastcli.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xnetblastcli.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blast_app_util -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_cmp.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_object_index.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object_index.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_object.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/annot_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_ci.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp:36:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::blast::qa::SeqAlign&}; _Tp = ncbi::blast::qa::SeqAlign; _Alloc = std::allocator<ncbi::blast::qa::SeqAlign>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::blast::qa::SeqAlign>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::blast::qa::SeqAlign*, std::vector<ncbi::blast::qa::SeqAlign> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp:36:
/usr/include/c++/8/bits/stl_vector.h: In function 'void ncbi::blast::qa::BlastSeqAlignSetConvert(const ncbi::objects::CSeq_align&, std::vector<ncbi::blast::qa::SeqAlign>&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::blast::qa::SeqAlign*, std::vector<ncbi::blast::qa::SeqAlign> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp -o seqalign_cmp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp -o seqalign_set_convert.o
/bin/rm -f libseqalign_util.a .libseqalign_util.a.stamp
ar cr libseqalign_util.a seqalign_cmp.o seqalign_set_convert.o
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqalign_util.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqalign_util.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqalign_util.a
/bin/ln -f .seqalign_util.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.seqalign_util.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd objtools/blast/services/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_services UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/services TMPL=blast_services -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp: In member function 'virtual bool ncbi::objects::CReaderBase::xIsTrackTerminator(const ncbi::CTempString&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:652:45: warning: 'static ncbi::CTempString ncbi::NStr::TruncateSpaces(ncbi::CTempString, ncbi::NStr::ETrunc)' is deprecated [-Wdeprecated-declarations]
auto line = NStr::TruncateSpaces(strLine);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2214:24: note: declared here
static CTempString TruncateSpaces(const CTempString str,
^~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:652:45: warning: 'static ncbi::CTempString ncbi::NStr::TruncateSpaces(ncbi::CTempString, ncbi::NStr::ETrunc)' is deprecated [-Wdeprecated-declarations]
auto line = NStr::TruncateSpaces(strLine);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2214:24: note: declared here
static CTempString TruncateSpaces(const CTempString str,
^~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/blast_services.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/data_source.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info_object.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp: In member function 'bool ncbi::objects::CFeature_table_reader_imp::x_AddQualifierToCdregion(ncbi::CRef<ncbi::objects::CSeq_feat>, ncbi::objects::CSeqFeatData&, ncbi::objects::CFeature_table_reader_imp::EQual, const string&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:1245:22: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
} catch( CStringException ) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp: In member function 'void ncbi::objects::CFeature_table_reader_imp::x_InitId(const string&, ncbi::objects::CFeature_table_reader::TFlags)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:3310:46: warning: enum constant in boolean context [-Wint-in-bool-context]
(flags && CFeature_table_reader::fAllIdsAsLocal) ? CSeq_id::fParse_AnyLocal:CSeq_id::fParse_Default);
^~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_info.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
e.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object_index.cpp -o annot_object_index.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_ci.cpp -o annot_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info.cpp -o tse_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info_object.cpp -o tse_info_object.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_info.cpp -o seq_entry_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o
/bin/rm -f libblast_services.so .libblast_services.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblast_services.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_services.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblast_services.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast_services.so
/bin/ln -f .blast_services.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.blast_services.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_info.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_base_info.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_base_info.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_base_info.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_info.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_info.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/data_source.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/data_source.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual void ncbi::objects::CFastaMapper::AssembleSeq(ncbi::objects::ILineErrorListener*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SFastaFileMap::SFastaEntry*, std::vector<ncbi::objects::SFastaFileMap::SFastaEntry> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp: In member function 'ncbi::CRef<ncbi::objects::CSeq_feat> ncbi::objects::CRepeatToFeat::operator()(const ncbi::objects::IRepeatRegion&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp:551:44: warning: enum constant in boolean context [-Wint-in-bool-context]
if (fRemoveRedundancy && m_Library &&
^~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_base_info.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_info.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_info.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::objects::CRawWiggleRecord&}; _Tp = ncbi::objects::CRawWiggleRecord; _Alloc = std::allocator<ncbi::objects::CRawWiggleRecord>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::CRawWiggleRecord>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::objects::CRawWiggleRecord*, std::vector<ncbi::objects::CRawWiggleRecord> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::objects::SValueInfo&}; _Tp = ncbi::objects::SValueInfo; _Alloc = std::allocator<ncbi::objects::SValueInfo>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::SValueInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_vector.h: In member function 'bool ncbi::objects::CWiggleReader::xReadFixedStepDataRaw(ncbi::ILineReader&, ncbi::objects::CRawWiggleTrack&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::CRawWiggleRecord*, std::vector<ncbi::objects::CRawWiggleRecord> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'bool ncbi::objects::CWiggleReader::xReadVariableStepDataRaw(ncbi::ILineReader&, ncbi::objects::CRawWiggleTrack&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::CRawWiggleRecord*, std::vector<ncbi::objects::CRawWiggleRecord> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Compare = __gnu_cxx::__ops::_Val_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Distance = int; _Tp = ncbi::objects::SValueInfo; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last,
^~~~~~~~~~~
/usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last,
^~~~~~~~~~
/usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__pop_heap(__first, __last, __last, __comp);
~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__make_heap(__first, __middle, __comp);
~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'void ncbi::objects::CWiggleReader::xPreprocessValues(ncbi::objects::SWiggleStat&)':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::objects::CSeq_table> ncbi::objects::CWiggleReader::xMakeTable()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::objects::CWiggleReader::xReadFixedStepData(const ncbi::objects::SFixedStepInfo&, ncbi::ILineReader&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::objects::CWiggleReader::xReadVariableStepData(const ncbi::objects::SVarStepInfo&, ncbi::ILineReader&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::objects::CWiggleReader::xReadBedLine(const string&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/objmgr_exception.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/prefetch_manager_impl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager_impl.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/priority.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/priority.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_sofa.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/prefetch_impl.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_impl.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/data_source.cpp -o data_source.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/priority.cpp -o priority.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_impl.cpp -o prefetch_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager_impl.cpp -o prefetch_manager_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blasIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp: In member function 'virtual bool ncbi::objects::CGff3Reader::xUpdateAnnotGeneric(const ncbi::objects::CGff2Record&, ncbi::CRef<ncbi::objects::CSeq_feat>, ncbi::CRef<ncbi::objects::CSeq_annot>, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp:603:10: warning: unused variable 'st' [-Wunused-variable]
auto st = pFeature->GetData().GetSubtype();
^~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/scope.cpp:41:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/prefetch_manager.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/prefetch_actions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_actions.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp -o reader_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp -o readfeat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp -o rm_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp -o wiggle_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_sofa.cpp -o gff3_sofa.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp -o gff3_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp -o gtf_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-securitIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/heap_scope.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/heap_scope.cpp:41:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_data.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp: In member function 'virtual bool ncbi::objects::CGtfReader::x_UpdateAnnotCds(const ncbi::objects::CGff2Record&, ncbi::CRef<ncbi::objects::CSeq_annot>)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp:363:10: warning: variable 'needXref' set but not used [-Wunused-but-set-variable]
bool needXref = false;
^~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_data.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/scope_impl.cpp:41:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/scope_info.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/scope_info.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/tse_handle.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/tse_handle.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gvf_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'virtual ncbi::CRef<ncbi::objects::CSeq_annot> ncbi::objects::CGff2Reader::ReadSeqAnnot(ncbi::ILineReader&, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:217:30: warning: enum constant in boolean context [-Wint-in-bool-context]
if ((m_iFlags && fGenbankMode) ||
^~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'virtual void ncbi::objects::CGff2Reader::xPostProcessAnnot(ncbi::CRef<ncbi::objects::CSeq_annot>&, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:323:23: warning: enum constant in boolean context [-Wint-in-bool-context]
if (!(m_iFlags && fGenbankMode)) {
^~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xGetStartsOnPlusStrand(ncbi::TSeqPos, const std::vector<std::__cxx11::basic_string<char> >&, bool, std::vector<int>&) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:1195:21: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare]
for (auto i=0; i<gapCount; ++i) {
~^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xSetDensegStarts(const std::vector<std::__cxx11::basic_string<char> >&, ncbi::objects::ENa_strand, ncbi::objects::ENa_strand, ncbi::TSeqPos, ncbi::TSeqPos, const ncbi::objects::CGff2Record&, ncbi::objects::CSeq_align_Base::C_Segs::TDenseg&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:1282:21: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare]
for (auto i=0; i<gapCount; ++i) {
~^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xAlignmentSetSpliced_seg(const ncbi::objects::CGff2Record&, ncbi::CRef<ncbi::objects::CSeq_align>)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:1369:21: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare]
for (auto i=0; i<gapCount; ++i) {
~^~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gvf_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
t+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/scope.cpp -o scope.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/heap_scope.cpp -o heap_scope.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/scope_impl.cpp -o scope_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/scope_info.cpp -o scope_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/tse_handle.cpp -o tse_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map.cpp -o seq_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=6In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/best_feat_finder.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/best_feat_finder.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_entry_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_ci.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_annot_ci.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_ci.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map_ci.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_ci.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/vcf_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
y -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/vcf_reader.cpp -o vcf_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/best_feat_finder.cpp -o best_feat_finder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/source_mod_parser.cpp -o source_mod_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_exception.cpp -o fasta_exception.oIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_table_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_ci.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_exception.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/source_mod_parser.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/source_mod_parser.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/source_mod_parser.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/source_mod_parser.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_converter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_entry_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_handle.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
4 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_ci.cpp -o seq_map_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_ci.cpp -o seq_entry_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_ci.cpp -o seq_annot_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_ci.cpp -o seq_table_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_handle.cpp -o seq_entry_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_handle.cpp -o bioseq_set_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_handle.cpp -o bioseq_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbiIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_set_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_handle.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_handle.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_converter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_annot_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_handle.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/ucscregion_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/ucscregion_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/objmgr_exception.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/message_listener.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/message_listener.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/handle_range.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/struct_cmt_reader.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/data_loader.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/data_loader.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/align_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/align_ci.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_handle.cpp -o seq_annot_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/align_ci.cpp -o align_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/data_loader.cpp -o data_loader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range.cpp -o handle_range.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/objmgr_exception.cpp -o objmgr_exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range_map.cpp -o handle_range_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/handle_range.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/handle_range_map.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range_map.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/line_error.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/line_error.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/object_manager.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector_ci.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seqdesc_ci.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_converter.cpp -o agp_converter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/struct_cmt_reader.cpp -o struct_cmt_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/message_listener.cpp -o message_listener.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/readers/line_error.cpp -o line_error.o
/bin/rm -f libxobjread.so .libxobjread.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjread.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC read_util.o format_guess_ex.o acc_pattern.o agp_read.o agp_seq_entry.o agp_util.o agp_validate_reader.o aln_reader.o bed_reader.o cigar.o fasta.o fasta_aln_builder.o fasta_reader_utils.o getfeature.o gff_reader.o track_data.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_sofa.o gff3_reader.o gtf_reader.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o best_feat_finder.o source_mod_parser.o fasta_exception.o agp_converter.o ucscregion_reader.o struct_cmt_reader.o message_listener.o line_error.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blastIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_split_info.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/tse_split_info.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+-2.7.1/c++/BUILD/lib -lsubmit -lseqset -lseq -lseqcode -lsequtil -lgeneral -lcreaders -lxutil -lpub -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxobjread.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjread.so
/bin/ln -f .xobjread.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjread.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_chunk_info.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/tse_chunk_info.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/objmgr/object_manager.cpp -o object_manager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector.cpp -o seq_vector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector_ci.cpp -o seq_vector_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seqdesc_ci.cpp -o seqdesc_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/tse_split_info.cpp -o tse_split_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/tse_chunk_info.cpp -o tse_chunk_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_ci.cpp -o bioseq_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/builIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_ci.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_ci.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_type_index.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_loc_mapper.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_mapper.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_align_mapper.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_mapper.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_collector.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/data_loader_factory.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/data_loader_factory.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_collector.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/mapped_feat.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/mapped_feat.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_feat_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_feat_handle.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
d/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_type_index.cpp -o annot_type_index.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_mapper.cpp -o seq_loc_mapper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_mapper.cpp -o seq_align_mapper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_collector.cpp -o annot_collector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/data_loader_factory.cpp -o data_loader_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/mapped_feat.cpp -o mapped_feat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_feat_handle.cpp -o seq_feat_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-prIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_graph_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_graph_handle.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_align_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_handle.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o
/bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp
ar cr libblast_app_util.a blast_app_util.o
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblast_app_util.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast_app_util.a
/bin/ln -f .blast_app_util.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.blast_app_util.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/tse_assigner.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/scope_impl.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction_impl.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
otector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_graph_handle.cpp -o seq_graph_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction_impl.cpp -o scope_transaction_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/edit_commands_impl.cpp -o edit_commands_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_edit_comIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/edit_commands_impl.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/edit_commands_impl.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_edit_commands.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_edit_commands.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_edit_commands.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_edit_commands.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_set_edit_commands.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_edit_commands.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/edit_saver.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/edit_saver.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/unsupp_editsaver.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/unsupp_editsaver.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mands.cpp -o bioseq_edit_commands.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_edit_commands.cpp -o seq_entry_edit_commands.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_edit_commands.cpp -o bioseq_set_edit_commands.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/edit_saver.cpp -o edit_saver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/unsupp_editsaver.cpp -o unsupp_editsaver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_engine.cpp -o edits_db_engine.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_saver.cpp -o edits_db_saver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/edits_db_engine.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_engine.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/edits_db_saver.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_saver.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_finder.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_finder.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/gc_assembly_parser.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/gc_assembly_parser.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/split_parser.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split_parser.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_id_sort.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_id_sort.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_id_sort.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_id_sort.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ncbi::objects::CSortableSeq_id::SIdPart}; _Tp = ncbi::objects::CSortableSeq_id::SIdPart; _Alloc = std::allocator<ncbi::objects::CSortableSeq_id::SIdPart>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::CSortableSeq_id::SIdPart>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::objects::CSortableSeq_id::SIdPart*, std::vector<ncbi::objects::CSortableSeq_id::SIdPart> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::CSortableSeq_id::SIdPart>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::objects::CSortableSeq_id::SIdPart*, std::vector<ncbi::objects::CSortableSeq_id::SIdPart> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ncbi::objects::CSortableSeq_id::SIdPart}; _Tp = ncbi::objects::CSortableSeq_id::SIdPart; _Alloc = std::allocator<ncbi::objects::CSortableSeq_id::SIdPart>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::CSortableSeq_id::SIdPart*, std::vector<ncbi::objects::CSortableSeq_id::SIdPart> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/annot_finder.cpp -o annot_finder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/gc_assembly_parser.cpp -o gc_assembly_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split_parser.cpp -o split_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/seq_id_sort.cpp -o seq_id_sort.o
/bin/rm -f libxobjmgr.so .libxobjmgr.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjmgr.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_table_setters.o seq_table_info.o seq_annot_info.o table_field.o seq_map_switch.o snp_annot_info.o annot_types_ci.o seq_loc_cvt.o annot_selector.o seq_descr_ci.o feat_ci.o graph_ci.o annot_object.o annot_object_index.o annot_ci.o tse_info.o tse_info_object.o seq_entry_info.o bioseq_base_info.o bioseq_set_info.o bioseq_info.o data_source.o priority.o prefetch_impl.o prefetch_manager.o prefetch_manager_impl.o prefetch_actions.o scope.o heap_scope.o scope_impl.o scope_info.o tse_handle.o seq_map.o seq_map_ci.o seq_entry_ci.o seq_annot_ci.o seq_table_ci.o seq_entry_handle.o bioseq_set_handle.o bioseq_handle.o seq_annot_handle.o align_ci.o data_loader.o handle_range.o objmgr_exception.o handle_range_map.o object_manager.o seq_vector.o seq_vector_ci.o seqdesc_ci.o tse_split_info.o tse_chunk_info.o bioseq_ci.o annot_type_index.o seq_loc_mapper.o seq_align_mapper.o annot_collector.o data_loader_factory.o mapped_feat.o seq_feat_handle.o seq_graph_handle.o seq_align_handle.o tse_assigner.o scope_transaction.o scope_transaction_impl.o edit_commands_impl.o bioseq_edit_commands.o seq_entry_edit_commands.o bioseq_set_edit_commands.o edit_saver.o unsupp_editsaver.o edits_db_engine.o edits_db_saver.o annot_finder.o gc_assembly_parser.o split_parser.o seq_id_sort.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxobjmgr.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjmgr.so
/bin/ln -f .xobjmgr.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjmgr.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null
cd objmgr/util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null
cd algo/dustmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util TMPL=util -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/dustmask TMPL=xalgodustmask -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/dustmask/symdust.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/dustmask/symdust.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbbitset.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/dispatcher.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdb.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfilter.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/reader.hpp:32,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/writer.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/processors.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/unicode.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: In member function 'char* ncbi::CSeqDBAtlas::Alloc(size_t, ncbi::CSeqDBLockHold&, bool)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:346:16: warning: catching polymorphic type 'class std::bad_alloc' by value [-Wcatch-value=]
catch(std::bad_alloc) {
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:160:13: warning: 'void ncbi::s_SeqDB_FileNotFound(const string&)' defined but not used [-Wunused-function]
static void s_SeqDB_FileNotFound(const string & fname)
^~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp: In function 'void ncbi::objects::GetProteinWeights(const ncbi::objects::CBioseq_Handle&, ncbi::objects::TWeights&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:362:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=]
} catch (CObjmgrUtilException) {
^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:60,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:35:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const sIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/unicode.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
td::__cxx11::basic_string<char>, std::pair<bool, long long int> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > >'} changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:35:
/usr/include/c++/8/bits/stl_map.h: In member function 'bool ncbi::CSeqDBAtlas::GetFileSizeL(const string&, ncbi::CSeqDBAtlas::TIndx&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp: In function 'ncbi::objects::feature::ELocationInFrame ncbi::objects::feature::IsLocationInFrame(const ncbi::objects::CSeq_feat_Handle&, const ncbi::objects::CSeq_loc&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:3391:89: warning: 'ncbi::objects::sequence::ECompare ncbi::objects::sequence::Compare(const ncbi::objects::CSeq_loc&, const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*)' is deprecated [-Wdeprecated-declarations]
sequence::ECompare cmp = sequence::Compare(cds.GetLocation(), loc, &(cds.GetScope()));
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/feature.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:84:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/seq_loc_util.hpp:200:20: note: declared here
sequence::ECompare Compare(const CSeq_loc& loc1,
^~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:3391:89: warning: 'ncbi::objects::sequence::ECompare ncbi::objects::sequence::Compare(const ncbi::objects::CSeq_loc&, const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*)' is deprecated [-Wdeprecated-declarations]
sequence::ECompare cmp = sequence::Compare(cds.GetLocation(), loc, &(cds.GetScope()));
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/feature.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:84:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/seq_loc_util.hpp:200:20: note: declared here
sequence::ECompare Compare(const CSeq_loc& loc1,
^~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp: In member function 'void ncbi::objects::CBioseqIndex::x_InitFeats()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1030:20: warning: variable 'sgx' set but not used [-Wunused-but-set-variable]
CGapIndex* sgx = NULL;
^~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:42:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/indexer.hpp: In constructor 'ncbi::objects::CGapIndex::CGapIndex(ncbi::TSeqPos, ncbi::TSeqPos, ncbi::TSeqPos, const string&, const std::vector<std::__cxx11::basic_string<char> >&, bool, bool, ncbi::objects::CBioseqIndex&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/indexer.hpp:576:10: warning: 'ncbi::objects::CGapIndex::m_IsAssemblyGap' will be initialized after [-Wreorder]
bool m_IsAssemblyGap;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/indexer.hpp:566:28: warning: 'ncbi::CWeakRef<ncbi::objects::CBioseqIndex> ncbi::objects::CGapIndex::m_Bsx' [-Wreorder]
CWeakRef<CBioseqIndex> m_Bsx;
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1362:1: warning: when initialized here [-Wreorder]
CGapIndex::CGapIndex (TSeqPos start,
^~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp: In function 'int ncbi::objects::SkipMixedContent(const char*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1835:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
for (int i = 0; i < sizeof (mixedTags); i++) {
~~^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp: In member function 'void ncbi::objects::CWordPairIndexer::PopulateWordPairIndex(std::__cxx11::string)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1912:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'unsigned int'} [-Wsign-compare]
for (int i = 0; i < str.length(); i++) {
~~^~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp: In function 'ncbi::CRef<ncbi::objects::CSeq_loc> ncbi::objects::sequence::SourceToProduct(const ncbi::objects::CSeq_feat&, const ncbi::objects::CSeq_loc&, ncbi::objects::sequence::TS2PFlags, ncbi::objects::CScope*, int*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:703:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=]
} catch (CObjmgrUtilException) {
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp: In function 'ncbi::CRef<ncbi::objects::CSeq_loc> ncbi::objects::sequence::ProductToSource(const ncbi::objects::CSeq_feat&, const ncbi::objects::CSeq_loc&, ncbi::objects::sequence::TP2SFlags, ncbi::objects::CScope*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:746:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=]
} catch (CObjmgrUtilException) {
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:751:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=]
} catch (CObjmgrUtilException) {
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp: In member function 'ncbi::CRef<ncbi::objects::CSeq_loc> ncbi::objects::SRelLoc::Resolve(const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*, ncbi::objects::SRelLoc::TFlags) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:4578:22: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=]
} catch (CObjmgrUtilException) {
^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:60,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:33:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const ncbi::CConstRef<ncbi::objects::CSeq_loc, ncbi::CObjectCounterLocker>&>, std::tuple<>}; _Key = ncbi::CConstRef<ncbi::objects::CSeq_loc>; _Val = std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double>; _KeyOfValue = std::_Select1st<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> >; _Compare = std::less<ncbi::CConstRef<ncbi::objects::CSeq_loc> >; _Alloc = std::allocator<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<ncbi::CConstRef<ncbi::objects::CSeq_loc>, std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double>, std::_Select1st<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> >, std::less<ncbi::CConstRef<ncbi::objects::CSeq_loc> >, std::allocator<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> >'} changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:33:
/usr/include/c++/8/bits/stl_map.h: In function 'void ncbi::objects::GetProteinWeights(const ncbi::objects::CBioseq_Handle&, ncbi::objects::TWeights&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<ncbi::CConstRef<ncbi::objects::CSeq_loc>, std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double>, std::_Select1st<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> >, std::less<ncbi::CConstRef<ncbi::objects::CSeq_loc> >, std::allocator<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long int, ncbi::objects::CMappedFeat>&}; _Tp = std::pair<long long int, ncbi::objects::CMappedFeat>; _Alloc = std::allocator<std::pair<long long int, ncbi::objects::CMappedFeat> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<long long int, ncbi::objects::CMappedFeat> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::objects::CMappedFeat>*, std::vector<std::pair<long long int, ncbi::objects::CMappedFeat> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In function 'void ncbi::objects::feature::GetOverlappingFeatures(ncbi::objects::CScope&, const ncbi::objects::CSeq_loc&, ncbi::objects::CSeqFeatData_Base::E_Choice, ncbi::objects::CSeqFeatData::ESubtype, ncbi::objects::sequence::EOverlapType, ncbi::objects::feature::TMappedFeatScores&, const ncbi::objects::SAnnotSelector*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::objects::CMappedFeat>*, std::vector<std::pair<long long int, ncbi::objects::CMappedFeat> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::objects::CMappedFeat>*, std::vector<std::pair<long long int, ncbi::objects::CMappedFeat> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp -o seqdbcommon.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/buIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_snp.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp:45:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seqtitle.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seqtitle.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadBinaryGiList(const string&, std::vector<int>&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:809:26: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (((endp - beginp) < 2U)
~~~~~~~~~~~~~~~~^~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadMemoryGiList(const char*, const char*, std::vector<ncbi::CSeqDBGiList::SGiOid>&, bool*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:886:32: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (((bendp - bbeginp) < 2U)
~~~~~~~~~~~~~~~~~~^~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::CSeqDBGiList::GetTiList(std::vector<long long unsigned int>&) const':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::CSeqDBIdSet::x_BooleanSetOperation(ncbi::CSeqDBIdSet::EOperation, const std::vector<long long int>&, bool, const std::vector<long long int>&, bool, std::vector<long long int>&, bool&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ncbi::CSeqDBGiList::STiOid}; _Tp = ncbi::CSeqDBGiList::STiOid; _Alloc = std::allocator<ncbi::CSeqDBGiList::STiOid>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::CSeqDBGiList::STiOid>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ncbi::CSeqDBGiList::STiOid}; _Tp = ncbi::CSeqDBGiList::STiOid; _Alloc = std::allocator<ncbi::CSeqDBGiList::STiOid>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::CSeqDBNegativeList> ncbi::CSeqDBIdSet::GetNegativeList()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<ncbi::CSeqDB_SortTiLessThan>]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::CSeqDB_SortTiLessThan>]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'void ncbi::CSeqDBNegativeList::InsureOrder()':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'bool ncbi::CSeqDBNegativeList::FindGi(ncbi::TGi)':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'bool ncbi::CSeqDBNegativeList::FindTi(ncbi::TTi)':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In static member function 'static void ncbi::CSeqDBIdSet::x_SortAndUnique(std::vector<long long int>&)':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >; _Distance = int; _Tp = ncbi::CSeqDBGiList::STiOid; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::CSeqDB_SortTiLessThan>]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::CSeqDB_SortTiLessThan>]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void ncbi::s_InsureOrder(TVector&) [with TCompare = ncbi::CSeqDB_SortTiLessThan; TVector = std::vector<ncbi::CSeqDBGiList::STiOid>]':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/dispatcher.cpp -o dispatcher.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp -o reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/writer.cpp -o writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/processors.cpp -o processors.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/seqref.cpp -o seqref.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-seIn file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat, ncbi::CObjectCounterLocker> >&}; _Tp = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >; _Alloc = std::allocator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/dustmask/symdust.cpp -o symdust.o
/bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgodustmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC symdust.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalgodustmask.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgodustmask.so
/bin/ln -f .xalgodustmask.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgodustmask.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/char_traits.h:39,
from /usr/include/c++/8/string:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/stl_algobase.h: In function '_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Tp = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >; _Compare = __gnu_cxx::__ops::_Iter_comp_val<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__lower_bound(_ForwardIterator __first, _ForwardIterator __last,
^~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function '_ForwardIterator std::__upper_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Tp = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2039:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__upper_bound(_ForwardIterator __first, _ForwardIterator __last,
^~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2039:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
/usr/include/c++/8/bits/stl_algo.h: In function '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >]':
/usr/include/c++/8/bits/stl_algo.h:1328:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__rotate(_RandomAccessIterator __first,
^~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1328:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1328:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
cd algo/segmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__merge_without_buffer(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2476:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__merge_without_buffer(_BidirectionalIterator __first,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2476:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2476:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2501:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
= std::__lower_bound(__middle, __last, *__first_cut,
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__gnu_cxx::__ops::__iter_comp_val(__comp));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2510:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
= std::__upper_bound(__first, __middle, *__second_cut,
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__gnu_cxx::__ops::__val_comp_iter(__comp));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1443:27: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
return std::__rotate(__first, __middle, __last,
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
std::__iterator_category(__first));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2518:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_without_buffer(__first, __first_cut, __new_middle,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__len11, __len22, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2520:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_without_buffer(__new_middle, __second_cut, __last,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__len1 - __len11, __len2 - __len22, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__inplace_stable_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2761:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__inplace_stable_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2761:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2766:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2770:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__inplace_stable_sort(__first, __middle, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2771:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__inplace_stable_sort(__middle, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2772:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_without_buffer(__first, __middle, __last,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
__middle - __first,
~~~~~~~~~~~~~~~~~~~
__last - __middle,
~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/include/c++/8/bits/stl_algo.h: In function '_OutputIterator std::__move_merge(_InputIterator, _InputIterator, _InputIterator, _InputIterator, _OutputIterator, _Compare) [with _InputIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _OutputIterator = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__move_merge(_InputIterator __first1, _InputIterator __last1,
^~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function '_OutputIterator std::__move_merge(_InputIterator, _InputIterator, _InputIterator, _InputIterator, _OutputIterator, _Compare) [with _InputIterator = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _OutputIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__merge_sort_with_buffer(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Pointer = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2705:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__merge_sort_with_buffer(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2705:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2695:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__insertion_sort(__first, __first + __chunk_size, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2698:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2674:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__result = std::__move_merge(__first, __first + __step_size,
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__first + __step_size,
~~~~~~~~~~~~~~~~~~~~~~
__first + __two_step,
~~~~~~~~~~~~~~~~~~~~~
__result, __comp);
~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2674:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2682:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__move_merge(__first, __first + __step_size,
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__first + __step_size, __last, __result, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2682:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2674:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__result = std::__move_merge(__first, __first + __step_size,
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__first + __step_size,
~~~~~~~~~~~~~~~~~~~~~~
__first + __two_step,
~~~~~~~~~~~~~~~~~~~~~
__result, __comp);
~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2682:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__move_merge(__first, __first + __step_size,
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__first + __step_size, __last, __result, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2682:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2698:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/segmask TMPL=xalgosegmask -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__merge_adaptive(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Pointer, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Distance = int; _Pointer = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2415:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__merge_adaptive(_BidirectionalIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2415:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2415:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2445:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
= std::__lower_bound(__middle, __last, *__first_cut,
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__gnu_cxx::__ops::__iter_comp_val(__comp));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2454:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
= std::__upper_bound(__first, __middle, *__second_cut,
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__gnu_cxx::__ops::__val_comp_iter(__comp));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1443:27: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
return std::__rotate(__first, __middle, __last,
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
std::__iterator_category(__first));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2463:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_adaptive(__first, __first_cut, __new_middle, __len11,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__len22, __buffer, __buffer_size, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2465:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_adaptive(__new_middle, __second_cut, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__len1 - __len11,
~~~~~~~~~~~~~~~~~
__len2 - __len22, __buffer,
~~~~~~~~~~~~~~~~~~~~~~~~~~~
__buffer_size, __comp);
~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__stable_sort_adaptive(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Distance, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Pointer = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2732:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__stable_sort_adaptive(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2732:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2741:31: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__stable_sort_adaptive(__first, __middle, __buffer,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__buffer_size, __comp);
~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2743:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__stable_sort_adaptive(__middle, __last, __buffer,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
__buffer_size, __comp);
~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2748:33: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_sort_with_buffer(__first, __middle, __buffer, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2749:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_sort_with_buffer(__middle, __last, __buffer, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2751:28: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_adaptive(__first, __middle, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
_Distance(__middle - __first),
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_Distance(__last - __middle),
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__buffer, __buffer_size,
~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In function 'void ncbi::objects::sequence::GetOverlappingFeatures(const ncbi::objects::CSeq_loc&, ncbi::objects::CSeqFeatData_Base::E_Choice, ncbi::objects::CSeqFeatData::ESubtype, ncbi::objects::sequence::EOverlapType, ncbi::objects::sequence::TFeatScores&, ncbi::objects::CScope&, ncbi::objects::sequence::TBestFeatOpts, ncbi::objects::sequence::CGetOverlappingFeaturesPlugin*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/stl_algo.h:5004:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__inplace_stable_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:5006:29: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__stable_sort_adaptive(__first, __last, __buf.begin(),
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_DistanceType(__buf.size()), __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/blob_id.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/blob_id.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/seqref.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/seqref.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/request_result.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbimpl.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/segmask/segmask.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/segmask/segmask.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'void ncbi::CSeqDBVol::GetRawSeqAndAmbig(int, const char**, int*, int*, ncbi::CSeqDBLockHold&) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:2623:11: warning: variable 'map_end' set but not used [-Wunused-but-set-variable]
TIndx map_end = 0;
^~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In function 'bool x_EndsWithStrain(const ncbi::CTempString&, const ncbi::CTempString&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1137:80: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase (taxname, strain, 0, taxname.size() - 1, NStr::eLast);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1137:80: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase (taxname, strain, 0, taxname.size() - 1, NStr::eLast);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In function 'std::__cxx11::string s_RemoveBracketedOrgFromEnd(std::__cxx11::string, std::__cxx11::string)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1716:61: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations]
SIZE_TYPE cp = NStr::Find(str, "[", 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here
SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern,
^~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1716:61: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations]
SIZE_TYPE cp = NStr::Find(str, "[", 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here
SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern,
^~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProteinIdx(const ncbi::objects::CBioseq_Handle&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1782:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'unsigned int'} [-Wsign-compare]
if (offset > 0 && offset < m_MainTitle.length()) {
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProtein(const ncbi::objects::CBioseq_Handle&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1980:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'unsigned int'} [-Wsign-compare]
if (offset > 0 && offset < m_MainTitle.length()) {
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In function 'size_t s_TitleEndsInOrganism(std::__cxx11::string&, ncbi::CTempString)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2595:68: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase(title, taxname, 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2595:68: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase(title, taxname, 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2596:17: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
if (pos == idx + 2) {
~~~~^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_AdjustProteinTitleSuffix(const ncbi::objects::CBioseq_Handle&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2654:83: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase(m_MainTitle, "][", 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2654:83: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase(m_MainTitle, "][", 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function 'std::__cxx11::string ncbi::objects::sequence::CDeflineGenerator::GenerateDefline(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::CDeflineGenerator::TUserFlags)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2981:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
for (int i = 0; i < sizeof (s_tpaPrefixList) / sizeof (const char*); i++) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_service.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ild/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp -o seqdbfile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp -o seqdbimpl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp -o seqdbvol.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp -o seqdbvolset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp -o seqdboidlist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp -o seqdbisam.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSETmake[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/segmask/segmask.cpp -o segmask.o
/bin/rm -f libxalgosegmask.so .libxalgosegmask.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgosegmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC segmask.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast -lxobjmgr -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgosegmask.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalgosegmask.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgosegmask.so
/bin/ln -f .xalgosegmask.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgosegmask.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp -o weight.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp -o sequence.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp -o feature.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp -o indexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp -o create_defline.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 cd objmgr/split/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split TMPL=id2_split -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
curity -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/blob_id.cpp -o blob_id.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/request_result.cpp -o request_result.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp -o reader_id1_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp -o reader_id2_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/incr_time.cpp -o incr_time.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_params.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_params.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/incr_time.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/incr_time.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/split/split_blob.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/split_blob.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/obj_sniff.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/obj_sniff.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbtax.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_impl.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/info_cache.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/info_cache.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter.cpp -o blob_splitter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_params.cpp -o blob_splitter_params.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/split_blob.cpp -o split_blob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_impl.cpp -o blob_splitter_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_parser.cpp -o blob_splitter_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_maker.cpp -o blob_splitter_maker.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=formatIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_parser.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/obj_sniff.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/obj_sniff.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ncbi::objects::CObjectsSniffer::SObjectDescription}; _Tp = ncbi::objects::CObjectsSniffer::SObjectDescription; _Alloc = std::allocator<ncbi::objects::CObjectsSniffer::SObjectDescription>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::CObjectsSniffer::SObjectDescription>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::objects::CObjectsSniffer::SObjectDescription*, std::vector<ncbi::objects::CObjectsSniffer::SObjectDescription> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ncbi::objects::CObjectsSniffer::SObjectDescription}; _Tp = ncbi::objects::CObjectsSniffer::SObjectDescription; _Alloc = std::allocator<ncbi::objects::CObjectsSniffer::SObjectDescription>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::CObjectsSniffer::SObjectDescription*, std::vector<ncbi::objects::CObjectsSniffer::SObjectDescription> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const string&, std::vector<std::__cxx11::basic_string<char> >&, std::vector<std::__cxx11::basic_string<char> >&, std::vector<long long int>&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:1001:9: warning: variable 'found_short' set but not used [-Wunused-but-set-variable]
int found_short(-1);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/split/id_range.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/id_range.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_maker.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_maker.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp: In function 'bool ncbi::objects::sequence::BadSeqLocSortOrder(const ncbi::objects::CBioseq_Handle&, const ncbi::objects::CSeq_loc&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp:605:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException) {
^~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'void ncbi::CSeqDBIsam::IdsToOids(int, int, ncbi::CSeqDBNegativeList&)':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/split/asn_sizer.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/asn_sizer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbblob.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/split/annot_piece.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/annot_piece.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/column_reader.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/split/object_splitinfo.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/object_splitinfo.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_align_util.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/split/chunk_info.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/chunk_info.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgimask.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/split/size.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/size.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_trimmer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/bioseqgaps_ci.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_align_util.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/bioseqgaps_ci.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_trimmer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
-D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp -o objutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature_edit.cpp -o feature_edit.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-comp_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp -o seqdbtax.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp -o seqdbgilistset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp -o seqdbexpert.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp -o seqdbblob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp -o seqdbcol.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp -o seqdbgimask.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/inclIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature_edit.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause_base.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause_base.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:1805:81: required from here
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:1733:57: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) {
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_source_desc.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_desc.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_source_desc.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_desc.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_available_modifier.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_available_modifier.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
ude /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp -o seqdbobj.o
/bin/rm -f libseqdb.so .libseqdb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastdb -lxobjmgr -lseq -lgeneral -lxser -lsequtil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqdb.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqdb.so
/bin/ln -f .seqdb.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.seqdb.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_mod_combo.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_mod_combo.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
ile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef.cpp -o autodef.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause_base.cpp -o autodef_feature_clause_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_desc.cpp -o autodef_source_desc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_available_modifier.cpp -o autodef_available_modifier.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_mod_combo.cpp -o autodef_mod_combo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_group.cpp -o autodef_source_group.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/incIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/blastdb_adapter.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/cached_sequence.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_group.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_group.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp: In member function 'bool ncbi::objects::CAutoDefFeatureClause::x_GetExonDescription(std::__cxx11::string&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp:725:28: warning: unused variable 'subtype' [-Wunused-variable]
CSeqFeatData::ESubtype subtype = m_MainFeat.GetData().GetSubtype();
^~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp -o bdbloader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp -o cached_sequence.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o
/bin/rm -f libncbi_xloader_blastdb.so .libncbi_xloader_blastdb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_blastdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC bdbloader.o cached_sequence.o local_blastdb_adapter.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjmgr -lseqset -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_blastdb.so
/bin/ln -f .ncbi_xloader_blastdb.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_blastdb.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
blast+-2.7.1/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o
/bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp
/bin/rm -f libncbi_xreader.so .libncbi_xreader.so.stamp
ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader.a
/bin/ln -f .ncbi_xreader-static.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader-static.dep
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader.so
/bin/ln -f .ncbi_xreader.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_volume.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_general.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_files.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp: In constructor 'ncbi::CWriteDB_File::CWriteDB_File(const string&, const string&, int, Uint8, bool)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:113:22: warning: unused variable 'MAX_OFFSET_BITS' [-Wunused-variable]
static const int MAX_OFFSET_BITS = (sizeof m_Offset * 8) - 1;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp: In member function 'int ncbi::CWriteDB_File::Write(const ncbi::CTempString&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:149:22: warning: unused variable 'MAX_OFFSET_BITS' [-Wunused-variable]
static const int MAX_OFFSET_BITS = (sizeof m_Offset * 8) - 1;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/services/blast_services.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'void ncbi::CBinaryListBuilder::Write(ncbi::CNcbiOstream&)':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp -o writedb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp -o writedb_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp -o writedb_volume.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp -o writedb_files.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp -o writedb_isam.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp -o writedb_gimask.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::CWriteDB_IsamIndex::SIdOid&}; _Tp = ncbi::CWriteDB_IsamIndex::SIdOid; _Alloc = std::allocator<ncbi::CWriteDB_IsamIndex::SIdOid>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::CWriteDB_IsamIndex::SIdOid>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::CWriteDB_IsamIndex::x_AddTraceIds(int, const TIdList&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::CWriteDB_IsamIndex::x_AddGis(int, const TIdList&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::CWriteDB_IsamIndex::AddPig(int, int)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Compare = __gnu_cxx::__ops::_Val_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Distance = int; _Tp = ncbi::CWriteDB_IsamIndex::SIdOid; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'void ncbi::CWriteDB_IsamIndex::x_FlushNumericIndex()':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blastdb/Blast_filter_program_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/blastdb/Blast_filter_program.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/mask_info_registry.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_general.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/taxid_set.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp -o writedb_convert.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp -o writedb_general.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp -o writedb_column.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp -o mask_info_registry.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp -o taxid_set.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/build_db.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blast_services_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blast_services_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_services_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j4 --jobserver-auth=7,8 all
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/impl/criteria.hpp:57,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/criteria.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/build_db.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/reader.hpp:32,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/cache/reader_cache.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/cache/writer_cache.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
IC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/criteria.cpp -o criteria.o
/bin/rm -f libwritedb.so .libwritedb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libwritedb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o criteria.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libwritedb.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libwritedb.so
/bin/ln -f .writedb.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.writedb.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o
/bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp
/bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp
ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_cache.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_cache.a
/bin/ln -f .ncbi_xreader_cache-static.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_cache-static.dep
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_cache.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_cache.so
/bin/ln -f .ncbi_xreader_cache.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_cache.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o
/bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp
/bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp
ar cr libncbi_xreader_id1.a reader_id1.o
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_id1.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id1.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id1.a
/bin/ln -f .ncbi_xreader_id1-static.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id1-static.dep
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id1.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id1.so
/bin/ln -f .ncbi_xreader_id1.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id1.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader_rmt.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/blastdb_adapter.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o
/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp
/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp
ar cr libncbi_xreader_id2.a reader_id2.o
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_id2.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id2.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id2.a
/bin/ln -f .ncbi_xreader_id2-static.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id2-static.dep
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id2.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id2.so
/bin/ln -f .ncbi_xreader_id2.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id2.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In function 'ncbi::CConstRef<ncbi::objects::CSeq_feat> ncbi::objects::sequence::GetBestMrnaForCds(const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, ncbi::objects::sequence::TBestFeatOpts, ncbi::objects::sequence::CGetOverlappingFeaturesPlugin*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/gbload_util.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbload_util.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbloader.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o
/bin/rm -f libncbi_xloader_blastdb_rmt.so .libncbi_xloader_blastdb_rmt.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_blastdb_rmt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC bdbloader_rmt.o remote_blastdb_adapter.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xloader_blastdb -lblast_services -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so
/bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/id_range.cpp -o id_range.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/object_splitinfo.cpp -o object_splitinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/asn_sizer.cpp -o asn_sizer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/annot_piece.cpp -o annot_piece.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/chunk_info.cpp -o chunk_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/size.cpp -o size.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o
/bin/rm -f libid2_split.so .libid2_split.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libid2_split.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blob_splitter.o blob_splitter_params.o split_blob.o blob_splitter_impl.o blob_splitter_parser.o blob_splitter_maker.o id_range.o object_splitinfo.o asn_sizer.o annot_piece.o chunk_info.o size.o split_exceptions.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjmgr -lseqsplit -lseqset -lseq -lgeneral -lxser -lxcompress -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2_split.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libid2_split.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libid2_split.so
/bin/ln -f .id2_split.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.id2_split.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbload_util.cpp -o gbload_util.o
/bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp
/bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp
ar cr libncbi_xloader_genbank.a gbloader.o gbload_util.o
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gbloader.o gbload_util.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_genbank.a
/bin/ln -f .ncbi_xloader_genbank-static.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_genbank-static.dep
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_genbank.so
/bin/ln -f .ncbi_xloader_genbank.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_genbank.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
cd objtools/simple/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/simple TMPL=xobjsimple -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/simple/simple_om.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/simple/simple_om.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
lude /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp -o autodef_feature_clause.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_options.cpp -o autodef_options.o
/bin/rm -f libxobjutil.so .libxobjutil.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjutil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC weight.o sequence.o feature.o indexer.o seqtitle.o create_defline.o obj_sniff.o seq_loc_util.o seq_align_util.o seq_trimmer.o bioseqgaps_ci.o objutil.o feature_edit.o autodef.o autodef_feature_clause_base.o autodef_source_desc.o autodef_available_modifier.o autodef_mod_combo.o autodef_source_group.o autodef_feature_clause.o autodef_options.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjmgr -lseqset -lseq -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxobjutil.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjutil.so
/bin/ln -f .xobjutil.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjutil.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
cd objtools/seqmasks_io/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null
cd algo/blast/dbindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null
cd objtools/alnmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j4 --jobserver-auth=7,8 all
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr TMPL=alnmgr -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_cmdline_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/aln_seqid.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_seqid.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/aln_builders.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_builders.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/dbindex/sequence_istream_bdb.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_converters.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:40:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:40:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp: In function 'void ncbi::InitSplicedsegFromPairwiseAln(ncbi::objects::CSpliced_seg&, const ncbi::CPairwiseAln&, ncbi::objects::CScope*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp:538:44: warning: typedef 'TAlnRngColl' locally defined but not used [-Wunused-local-typedefs]
typedef CAlignRangeCollection<TAlnRng> TAlnRngColl;
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable]
unsigned long tmp;
^~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp -o mask_cmdline_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp -o mask_bdb_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp -o mask_fasta_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer.cpp -o mask_writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp -o mask_writer_fasta.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::__cxx11::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(ncbi::blastdbindex::CSubjectMap_Factory_Base::TSeqData&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:53: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations]
string idstr = objects::sequence::GetTitle( bsh );
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here
string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0);
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:53: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations]
string idstr = objects::sequence::GetTitle( bsh );
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here
string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0);
^~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/align_range.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alndiag.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alndiag.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/simple/simple_om.cpp -o simple_om.o
/bin/rm -f libxobjsimple.so .libxobjsimple.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjsimple.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC simple_om.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xloader_genbank -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjsimple.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxobjsimple.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjsimple.so
/bin/ln -f .xobjsimple.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjsimple.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j4 --jobserver-auth=7,8 all
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer_seqloc.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer_int.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_int.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer_tab.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_search.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alndiag.cpp -o alndiag.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/pairwise_aln.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/aln_serial.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_serial.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_search.cpp:38:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In constructor 'ncbi::blastdbindex::CDbIndex::CSearchResults::CSearchResults(long unsigned int, ncbi::blastdbindex::CDbIndex::TSeqNum, ncbi::blastdbindex::CDbIndex::TSeqNum, const TWord*, size_t)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_dataextract.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_formatter.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef<ncbi::objects::CSeq_align> ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector<int>&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ncbi::objects::CAlnMap::ESegmentTrimFlag)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp:1467:35: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CAlnMap::TNumrow' {aka 'int'} and 'std::vector<int>::size_type' {aka 'unsigned int'} [-Wsign-compare]
for (TNumrow row = 0; row < selected_rows.size(); row++) {
~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/invalid_data_exception.hpp:31,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/invalid_data_exception.hpp:31,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'ncbi::CConstRef<ncbi::blastdbindex::CDbIndex::CSearchResults> ncbi::blastdbindex::CSearch_Base<LEGACY, NHITS, derived_t>::operator()() [with bool LEGACY = true; long unsigned int NHITS = 1; derived_t = ncbi::blastdbindex::CSearch<true, 1>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:49:74: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config /* = CSeqFormatterConfig() */)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:270:72: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void CSeqFormatter::DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config)
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp: In member function 'std::__cxx11::string ncbi::CBlastDBExtractor::ExtractLeafTaxIds()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:396:24: warning: variable 'taxids_iter' set but not used [-Wunused-but-set-variable]
set<int>::iterator taxids_iter = taxids.begin();
^~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'ncbi::CConstRef<ncbi::blastdbindex::CDbIndex::CSearchResults> ncbi::blastdbindex::CSearch_Base<LEGACY, NHITS, derived_t>::operator()() [with bool LEGACY = false; long unsigned int NHITS = 1; derived_t = ncbi::blastdbindex::CSearch<false, 1>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o
/bin/rm -f libseqmasks_io.so .libseqmasks_io.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqmasks_io.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjread -lxobjutil -lxobjmgr -lblastdb -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqmasks_io.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqmasks_io.so
/bin/ln -f .seqmasks_io.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.seqmasks_io.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp -o dbindex.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o
/bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /bucd objtools/cleanup/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null
ild/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalgoblastdbindex.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgoblastdbindex.so
/bin/ln -f .xalgoblastdbindex.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgoblastdbindex.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup TMPL=cleanup -w -j4 --jobserver-auth=7,8 all
cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmapprint.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnseq.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmatch.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp -o blastdb_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp -o seq_formatter.o
/bin/rm -f libblastdb_format.so .libblastdb_format.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastdb_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_writer.o blastdb_dataextract.o blastdb_formatter.o seq_formatter.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjutil -lxobjmgr -lseq -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastdb_format.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastdb_format.so
/bin/ln -f .blastdb_format.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.blastdb_format.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup_utils.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd app/dustmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/dustmasker TMPL=dustmasker -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup_utils.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/dustmasker/main.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp: In static member function 'static bool ncbi::objects::CAlnMixMatches::x_CompareChainScores(const ncbi::CRef<ncbi::objects::CAlnMixMatch>&, const ncbi::CRef<ncbi::objects::CAlnMixMatch>&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:76:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
match1->m_ChainScore == match2->m_ChainScore &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
match1->m_Score > match2->m_Score ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp: In member function 'void ncbi::objects::CAlnMixMatches::Add(const ncbi::objects::CDense_seg&, ncbi::objects::CAlnMixMatches::TAddFlags)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:192:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
(aln_seq1->m_StrandScore > 0 &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
strand1 == eNa_strand_minus ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:196:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
aln_seq2->m_StrandScore > 0 &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
strand2 == eNa_strand_minus ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:198:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
aln_seq2->m_StrandScore < 0 &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
strand2 != eNa_strand_minus)) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmerger.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmerger.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:140:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (m_AlnMixMatches->m_ContainsNA && m_AlnMixMatches->m_ContainsAA ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_CreateDenseg()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:1210:44: warning: comparison of integer expressions of different signedness: 'const unsigned int' and 'int' [-Wsign-compare]
if (start_its_i->second->first != -1) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:1232:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (m_AlnMixMatches->m_ContainsNA && m_AlnMixMatches->m_ContainsAA ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp: In member function 'void seqdb::CSeqDBIsam_32bit_GI::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:4347:45: warning: integer overflow in expression of type 'long int' results in '-1073741824' [-Woverflow]
const Uint4 big_gi = 3L * 1024L * 1024L * 1024L; // 3 "billion"
~~~~~~~~~~~~~~~~~~~^~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:752:44: warning: 'width2' may be used uninitialized in this function [-Wmaybe-uninitialized]
while(start < start2 + len * width2) {
~~~~^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::x_HasShortIntron(const ncbi::objects::CSeq_loc&, size_t)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp:2623:68: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare]
if (abs((long int)this_start - (long int)prev_end) < min_len) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnpos_ci.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnpos_ci.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmix.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmix.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/dustmasker/main.cpp -o main.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.cpp -o dust_mask_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o dust_mask_app.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgodustmask -lseqmasks_io -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lseqdb -lblastdb -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o dustmasker
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f dustmasker /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f dustmasker /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/dustmasker
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmerger.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmix.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
S=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp -o alnmap.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmapprint.cpp -o alnmapprint.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp -o alnmatch.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (plus && prev_start_plus_len < start ||
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp: In static member function 'static bool ncbi::objects::CAlnMixSequences::x_CompareChainScores(const ncbi::CRef<ncbi::objects::CAlnMixSeq>&, const ncbi::CRef<ncbi::objects::CAlnMixSeq>&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp:84:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_ChainScore == seq2->m_ChainScore &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_Score > seq2->m_Score ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::x_RemoveFlankingQuotes(std::__cxx11::string&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:7071:22: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare]
for( ; first_pos <= last_pos ; ++first_pos, --last_pos ) {
~~~~~~~~~~^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:7085:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare]
if( first_pos > last_pos ) {
~~~~~~~~~~^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::RnarefGenBC(ncbi::objects::CRNA_ref&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:8276:10: warning: unused variable 'changed' [-Wunused-variable]
bool changed = false;
^~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::RnaFeatBC(ncbi::objects::CRNA_ref&, ncbi::objects::CSeq_feat&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:9168:102: warning: enum constant in boolean context [-Wint-in-bool-context]
(rna.GetType() == CRNA_ref::eType_mRNA || rna.GetType() == CRNA_ref::eType_rRNA || CRNA_ref::eType_tRNA) &&
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::x_FixStructuredCommentKeywords(ncbi::objects::CBioseq&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:10153:22: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException) {
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:10155:18: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException) {
^~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestNoFormatSpecifier::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:55:41: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
BOOST_REQUIRE_THROW(CSeqFormatter f(format_spec, db, std::cout),
^~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:102:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL'
S; \
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_Empty::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:119:57: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
#define NcbiEmptyString NCBI_NS_NCBI::CNcbiEmptyString::Get()
^~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:102:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL'
S; \
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:120:19: note: in expansion of macro 'NcbiEmptyString'
#define kEmptyStr NcbiEmptyString
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:62:41: note: in expansion of macro 'kEmptyStr'
BOOST_REQUIRE_THROW(CSeqFormatter f(kEmptyStr, db, std::cout),
^~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_InvalidAlgoId::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:69:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:71:40: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
BOOST_REQUIRE_THROW(CSeqFormatter f("%m", db, std::cout, config),
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:102:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL'
S; \
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestValidFormatSpecifiers::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:78:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:94:24: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(*itr, db, std::cout, config);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:98:20: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f("%m", db, std::cout, config);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiOidLength::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:109:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqId::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:151:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqIdLong::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:195:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestAccessionPIGTaxidTitle::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:228:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiGivenPIG::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:259:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSequenceDataLength::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:284:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedFasta::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:314:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:319:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out, config);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedSequenceData::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:358:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:361:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out, config);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnvec.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp -o seq_formatter_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seq_writer_unit_test.o seq_formatter_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastdb_format -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -ldl -lm -lpthread -o blastdb_format_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_format_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdb_format_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdb_format_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec_iterator.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnvec.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (left_seg < 0 || seg > right_seg && right_seg > 0) {
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (left_seg < 0 || seg > right_seg && right_seg > 0) {
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/pairwise_aln.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/pairwise_aln.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o gene_info_reader
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f gene_info_reader /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/gene_info_reader
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
bi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbiIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/sparse_aln.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/sparse_aln.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/sparse_ci.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_ci.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/sparse_aln.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function 'std::__cxx11::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::__cxx11::string&, const TSignedRange&, bool) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison of integer expressions of different signedness: 'ncbi::COpenRange<int>::position_type' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare]
if (translate && aln_range.GetLength() >= trim_from + trim_to) {
~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o seqdb_demo
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqdb_demo /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/seqdb_demo
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/score_builder_base.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/score_builder_base.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alntext.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alntext.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/score_builder_base.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/score_builder_base.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_perf.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o seqdb_perf
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqdb_perf /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/seqdb_perf
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_ci.cpp -o sparse_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alntext.cpp -o alntext.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/score_builder_base.cpp -o score_builder_base.o
/bin/rm -f libxalnmgr.so .libxalnmgr.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalnmgr.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjutil -lxobjmgr -lseqset -lseq -lxser -ltables -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalnmgr.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalnmgr.so
/bin/ln -f .xalnmgr.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xalnmgr.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
cd algo/winmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask TMPL=xalgowinmask -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In member function 'void writedb::CSeqDBIsam_32bit_GI::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2815:45: warning: integer overflow in expression of type 'long int' results in '-1073741824' [-Woverflow]
const Uint4 big_gi = 3L * 1024L * 1024L * 1024L; // 3 "billion"
~~~~~~~~~~~~~~~~~~~^~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_score.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_score_mean_glob.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_min.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp: In member function 'double ncbi::CSeqMasker::MergeAvg(std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator, const iterator&, Uint4) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:404:8: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
double CSeqMasker::MergeAvg( TMList::iterator mi,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp: In member function 'void ncbi::CSeqMasker::Merge(ncbi::CSeqMasker::TMList&, std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator, ncbi::CSeqMasker::TMList&, std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator&) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:418:6: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
void CSeqMasker::Merge( TMList & m, TMList::iterator mi,
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp: In member function 'ncbi::CSeqMasker::TMaskList* ncbi::CSeqMasker::DoMask(const ncbi::objects::CSeqVector&, ncbi::TSeqPos, ncbi::TSeqPos) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:305:32: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
lavg = MergeAvg( k, tmp, unit_size );
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:311:32: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
ravg = MergeAvg( ii, j, unit_size );
~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:328:42: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
k->avg = MergeAvg( k, --j, unit_size );
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:354:34: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
k->avg = MergeAvg( k, --j, unit_size );
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:386:34: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
k->avg = MergeAvg( k, j, unit_size );
~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean.cpp -o seq_masker_score_mean.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp -o seq_masker_score_mean_glob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_min.cpp -o seq_masker_score_min.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_util.cpp -o seq_masker_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=formatIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_util.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window_ambig.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_ambig.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void writedb::BinaryListBuilder::test_method()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/incluIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_factory.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_factory.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat_ascii.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_ascii.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_uset_simple.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_simple.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_bin.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_bin.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat_factory.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_factory.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_uset_array.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_array.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
de /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_bin.cpp -o seq_masker_istat_bin.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt.cpp -o seq_masker_ostat_opt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_bin.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_opt_ascii.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_uset_hash.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_hash.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat_oascii.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_opt_bin.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.cpp -o autogenerated_cleanup.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp -o autogenerated_extended_cleanup.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp -o cleanup.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup_utils.cpp -o cleanup_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp -o newcleanupp.o
/bin/rm -f libxcleanup.so .libxcleanup.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxcleanup.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o newcleanupp.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjutil -lvalid -lsubmit -ltaxon3 -lxregexp -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lpcre
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxcleanup.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxcleanup.so
/bin/ln -f .xcleanup.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xcleanup.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
cd objtools/align_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format TMPL=align_format -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
ile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp -o seq_masker_ostat_opt_ascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_obinary.cpp -o seq_masker_istat_obinary.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_cache_boost.cpp -o seq_masker_cache_boost.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat_obinary.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_obinary.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_cache_boost.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_cache_boost.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/align_format/format_flags.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/format_flags.cpp:30:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showdefline.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/align_format_util.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_counts_converter.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp: In constructor 'ncbi::CSeqMaskerIstatOAscii::CSeqMaskerIstatOAscii(const string&, Uint4, Uint4, Uint4, Uint4, Uint4, Uint4, Uint4)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp:113:60: warning: 'unit_size' may be used uninitialized in this function [-Wmaybe-uninitialized]
if( k == 0U || k > (Uint4)(2*unit_size - 1) )
~~~~~~~~~~~~~^~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showdefline.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp: In member function 'void ncbi::align_format::CDisplaySeqalign::DisplaySeqalign(ncbi::CNcbiOstream&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:2044:33: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException e){
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp: In function 'void ncbi::align_format::s_MakeDomainString(int, int, const string&, std::__cxx11::string&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:4355:49: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'unsigned int'} [-Wsign-compare]
for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){
~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:4355:81: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'unsigned int'} [-Wsign-compare]
for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){
~~^~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_dup_table.cpp:40:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/win_mask_config.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_gen_counts.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/tabular.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_dup_table.cpp:40:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/win_mask_config.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_gen_counts.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp: In static member function 'static void ncbi::CWinMaskConfig::AddWinMaskArgs(ncbi::CArgDescriptions&, ncbi::CWinMaskConfig::EAppType, bool)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:181:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if(type == eAny || type >= eGenerateMasksWithDuster)
^~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:185:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
arg_desc.AddDefaultKey( "dust_level", "dust_level",
^~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/tabular.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:130:45: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations]
string id_str = sequence::GetTitle( bsh );
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here
string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0);
^~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:130:45: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations]
string id_str = sequence::GetTitle( bsh );
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here
string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0);
^~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/align_format_util.cpp:36:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::align_format::CAlignFormatUtil::SDbInfo&}; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator<ncbi::align_format::CAlignFormatUtil::SDbInfo>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/format_flags.cpp -o format_flags.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/align_format_util.cpp -o align_format_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showdefline.cpp -o showdefline.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp -o showalign.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/tabular.cpp -o tabular.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/align_format/seqalignfilter.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/seqalignfilter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/align_format/vectorscreen.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/vectorscreen.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_counts_converter.cpp -o win_mask_counts_converter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp -o win_mask_config.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o
/bin/rm -f libxalgowinmask.so .libxalgowinmask.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgowinmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/taxFormat.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o seq_masker_istat.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqmasks_io -lxobjread -lxobjutil -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalgowinmask.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgowinmask.so
/bin/ln -f .xalgowinmask.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgowinmask.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
cd objtools/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xformat UNIX_PROJ="" sources= configurables=configurables.null
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/taxFormat.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/aln_printer.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format TMPL=xformat -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/contig_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/basecount_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/accession_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/aln_printer.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/accession_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp: In function 'void ncbi::objects::s_GetAssemblyInfo(const ncbi::objects::CBioseqContext&, std::__cxx11::string&, const ncbi::objects::CUser_object&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp:367:16: warning: unused variable 'is_html' [-Wunused-variable]
const bool is_html = ctx.Config().DoHTML();
^~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/accession_item.cpp -o accession_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/basecount_item.cpp -o basecount_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp -o comment_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/contig_item.cpp -o contig_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/date_item.cpp -o date_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/dbsource_item.cpp -o dbsource_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/date_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/defline_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/dbsource_item.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:44:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/defline_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/dbsource_item.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:44:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp -o criteria_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie writedb_unit_test.o criteria_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o writedb_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f writedb_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/writedb_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp: In function 'const string& ncbi::objects::s_AaName(int)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:1815:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare]
if ( idx > 0 && idx < ArraySize(s_TrnaList) ) {
~~~~^~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j4 --jobserver-auth=7,8 all
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp: In static member function 'static std::__cxx11::string ncbi::objects::CFeatureItem::x_SeqIdWriteForTable(const ncbi::objects::CBioseq&, bool, bool)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:5031:20: warning: variable 'patent' set but not used [-Wunused-but-set-variable]
const CSeq_id* patent = NULL;
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:5032:20: warning: variable 'pdb' set but not used [-Wunused-but-set-variable]
const CSeq_id* pdb = NULL;
^~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/ctrl_items.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/ctrl_items.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/dbindex/sequence_istream_fasta.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/main.cpp:42:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/dbindex/sequence_istream_fasta.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/main.cpp:42:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/locus_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp: In member function 'virtual void ncbi::objects::CKeywordsItem::x_GatherInfo(ncbi::objects::CBioseqContext&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp:286:18: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException) {
^~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/locus_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
ILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/defline_item.cpp -o defline_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp -o feature_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_item.cpp -o genome_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/ctrl_items.cpp -o ctrl_items.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp -o keywords_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/locus_item.cpp -o locus_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp -o primary_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o mkindex_app.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o makembindex
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f makembindex /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/makembindex
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/segment_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
cd app/winmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker TMPL=winmasker -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/reference_item.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker/main.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/dustmask/symdust.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/sequence_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/reference_item.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp: In member function 'void ncbi::objects::CPrimaryItem::x_GetStrForPrimary(ncbi::objects::CBioseqContext&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:213:63: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare]
if ( ctx.IsRefSeq() && last_stop > -1 && (this_start > (last_stop + 1)) ) {
~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:214:28: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare]
if (this_start < (15 + last_stop) ) {
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/sequence_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/wgs_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/version_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker/main.cpp -o main.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o win_mask_app.o win_mask_sdust_masker.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgowinmask -lxalgodustmask -lblast -lcomposition_adjustment -lseqmasks_io -lseqdb -lblastdb -ltables -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o windowmasker
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f windowmasker /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f windowmasker /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/windowmasker
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
cd algo/blast/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api TMPL=xblast -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
-g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/reference_item.cpp -o reference_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/segment_item.cpp -o segment_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/sequence_item.cpp -o sequence_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp -o source_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/version_item.cpp -o version_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/wgs_item.cpp -o wgs_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-bIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_cxx.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/tsa_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_SetSource(const ncbi::objects::CBioSource&, const ncbi::CSerialObject&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp:325:21: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CBioSource_Base::TGenome' {aka 'int'} and 'unsigned int' [-Wsign-compare]
if ( genome >= s_organelle_prefix_size ) {
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/remote_blast.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_builder.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_seqloc.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_cxx.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp: In member function 'bool ncbi::blast::CBlastOptionsLocal::Validate() const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp:387:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp:396:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else'
return true;
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_seqloc.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux.cpp -o blast_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_cxx.cpp -o blast_options_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp -o blast_options_local_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_builder.cpp -o blast_options_builder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp -o blast_setup_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqalign.cpp -o blast_seqalign.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blasIn file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/align_format_util.cpp:36:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void ncbi::align_format::CAlignFormatUtil::GetBlastDbInfo(std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo>&, const string&, bool, int, bool)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_nucl_options.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqalign.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqalign.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_nucl_options.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'char* ncbi::blast::CBlastOptionsHandle::GetFilterString() const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:100:36: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
return m_Opts->GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'void ncbi::blast::CBlastOptionsHandle::SetFilterString(const char*, bool)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:106:37: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
m_Opts->SetFilterString(f, clear); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:1193:34: note: in expansion of macro 'THROWS'
THROWS((CBlastException))
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:1241:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException))
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/context.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp: In member function 'virtual void ncbi::objects::CFlatSeqIdQVal::Format(ncbi::objects::TFlatQuals&, const ncbi::CTempString&, ncbi::objects::CBioseqContext&, ncbi::objects::IFlatQVal::TFlags) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp:1050:10: warning: unused variable 'bHtml' [-Wunused-variable]
bool bHtml = ctx.Config().DoHTML();
^~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/context.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp: In member function 'void ncbi::objects::CFlatGatherer::x_IdComments(ncbi::objects::CBioseqContext&, ncbi::objects::CFlatGatherer::EGenomeAnnotComment) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:1029:34: warning: unused variable 'format' [-Wunused-variable]
CCommentItem::ECommentFormat format = ctx.Config().DoHTML() ?
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp: In member function 'void ncbi::objects::CFlatGatherer::x_CollectBioSources(ncbi::objects::CFlatGatherer::TSourceFeatSet&) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:1798:13: warning: unused variable 'scope' [-Wunused-variable]
CScope* scope = &ctx.GetScope();
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:759:13: warning: 'bool ncbi::objects::s_NsAreGaps(const ncbi::objects::CBioseq_Handle&, ncbi::objects::CBioseqContext&)' defined but not used [-Wunused-function]
static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx)
^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/disc_nucl_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/disc_nucl_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_rps_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_prot_options.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_gather.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
last+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/tsa_item.cpp -o tsa_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_seqloc.cpp -o flat_seqloc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp -o qualifiers.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/context.cpp -o context.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp -o gather_items.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_gather.cpp -o embl_gather.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_gather.cpp -o genbank_gather.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_gather.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_gather.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/disc_nucl_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/disc_nucl_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_rps_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_prot_options.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_gather.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp: In member function 'void ncbi::objects::CFlatFileGenerator::Generate(const ncbi::objects::CSeq_entry_Handle&, ncbi::objects::CFlatItemOStream&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:258:10: warning: unused variable 'nearFeatsSuppress' [-Wunused-variable]
bool nearFeatsSuppress = false;
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:261:10: warning: variable 'isNgNtNwNz' set but not used [-Wunused-but-set-variable]
bool isNgNtNwNz = false;
^~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:262:10: warning: variable 'isGED' set but not used [-Wunused-but-set-variable]
bool isGED = false;
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:263:10: warning: variable 'isTPA' set but not used [-Wunused-but-set-variable]
bool isTPA = false;
^~~~~
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void ncbi::align_format::CAlignFormatUtil::FillScanModeBlastDbInfo(std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo>&, bool, int, Int8, std::__cxx11::string&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
t+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp -o blast_options_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_nucl_options.cpp -o blast_nucl_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/disc_nucl_options.cpp -o disc_nucl_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_prot_options.cpp -o blast_prot_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_options.cpp -o psiblast_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_rps_options.cpp -o blast_rps_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_formatter.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastx_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastx_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/rpstblastn_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpstblastn_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastn_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastn_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blastx_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastx_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/item_formatter.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/rpstblastn_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpstblastn_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastx_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastx_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastn_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastn_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/item_formatter.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp: In member function 'virtual void ncbi::objects::CGenbankFormatter::FormatSequence(const ncbi::objects::CSequenceItem&, ncbi::objects::IFlatTextOStream&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp:1963:18: warning: catching polymorphic type 'class ncbi::objects::CSeqVectorException' by value [-Wcatch-value=]
} catch (CSeqVectorException) {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp:2011:26: warning: catching polymorphic type 'class ncbi::objects::CSeqVectorException' by value [-Wcatch-value=]
} catch (CSeqVectorException) {
^~~~~~~~~~~~~~~~~~~
ITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastx_options.cpp -o blastx_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastx_options.cpp -o tblastx_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastn_options.cpp -o tblastn_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpstblastn_options.cpp -o rpstblastn_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_nucl_options.cpp -o phiblast_nucl_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_prot_options.cpp -o phiblast_prot_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/inclIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/item_ostream.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/format_item_ostream.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
GEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp -o flat_file_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/item_formatter.cpp -o item_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_formatter.cpp -o embl_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp -o genbank_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/format_item_ostream.cpp -o format_item_ostream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/item_ostream.cpp -o item_ostream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/ostream_text_ostream.cpp -o ostreamIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/ostream_text_ostream.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_nucl_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_nucl_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_blast.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_prot_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/pssm_engine.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/origin_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_gather.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_gather.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_formatter.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_nucl_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_nucl_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_prot_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/pssm_engine.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_formatter.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -ldl -lm -lpthread -o seqdb_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqdb_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/seqdb_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/alignment_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_seqinfosrc.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/format/flat_file_config.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_config.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_blast.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gbseq_formatter.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/format/flat_file_config.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_config.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_seqinfosrc.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gbseq_formatter.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
_text_ostream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/origin_item.cpp -o origin_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_gather.cpp -o ftable_gather.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_formatter.cpp -o ftable_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gbseq_formatter.cpp -o gbseq_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_config.cpp -o flat_file_config.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/alignment_item.cpp -o alignment_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_ude /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/pssm_engine.cpp -o pssm_engine.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_blast.cpp -o local_blast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_blast.cpp -o remote_blast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp -o seqinfosrc_seqvec.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp -o seqinfosrc_seqdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp -o seqinfosrc_bioseq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_multiseq.cpp -o seqsrc_multiseq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gap_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_seqdb.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_project_item.cpp:33:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_multiseq.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/format/cigar_formatter.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/sam_formatter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/cigar_formatter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bl2seq.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_multiseq.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_seqdb.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/format/cigar_formatter.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/sam_formatter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/cigar_formatter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bl2seq.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_seqdb.cpp -o seqsrc_seqdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.cpp -o seqsrc_query_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bl2seq.cpp -o bl2seq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_objmgr_tools.cpp -o blast_objmgr_tools.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/repeats_filter_cxx.cpp -o repeats_filter_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_mtlock.cpp -o blast_mtlock.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_mtlock.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/inst_info_map.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/inst_info_map.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/format/items/item_base.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/format/items/html_anchor_item.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/html_anchor_item.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/format/gather_iter.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_iter.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psibl2seq.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psibl2seq.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/repeats_filter_cxx.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_objmgr_tools.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/local_db_adapter.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_db_adapter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/format/gather_iter.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_iter.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_objmgr_tools.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/repeats_filter_cxx.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/local_db_adapter.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_db_adapter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gap_item.cpp -o gap_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_project_item.cpp -o genome_project_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/sam_formatter.cpp -o sam_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/cigar_formatter.cpp -o cigar_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_iter.cpp -o gather_iter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/html_anchor_item.cpp -o html_anchor_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/inst_info_map.cpp -o inst_info_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/format/items/flat_qual_slots.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_qual_slots.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/format/items/flat_qual_slots.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_qual_slots.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_iteration.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_impl.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_impl.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psi_pssm_input.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psi_pssm_input.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/format/items/gene_finder.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gene_finder.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/format/items/gene_finder.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gene_finder.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psibl2seq.cpp -o psibl2seq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_db_adapter.cpp -o local_db_adapter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_iteration.cpp -o psiblast_iteration.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psi_pssm_input.cpp -o psi_pssm_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o
/usIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/msa_pssm_input.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux_priv.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux_priv.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_advprot_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ExtractAlignmentData()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp:376:22: warning: comparison of integer expressions of different signedness: 'int' and 'Uint4' {aka 'unsigned int'} [-Wsign-compare]
while (k < m_Msa->dimensions->query_length &&
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/taxFormat.cpp -o taxFormat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o
/bin/rm -f libalign_format.so .libalign_format.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libalign_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalnmgr -lncbi_xloader_genbank -lseqdb -lblast_services -lxobjread -lxobjutil -lxobjmgr -lxnetblast -lblastdb -lgene_info -ltaxon1 -lseqset -lseq -lgeneral -lxser -lxcgi -lxhtml -ltables -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libalign_format.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libalign_format.so
/bin/ln -f .align_format.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.align_format.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
cd objtools/align_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /usr/include/c++/8/list:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/8/bits/list.tcc: In member function 'std::__cxx11::list<_Tp, _Alloc>::iterator std::__cxx11::list<_Tp, _Alloc>::insert(std::__cxx11::list<_Tp, _Alloc>::const_iterator, std::__cxx11::list<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/list.tcc:117:5: note: parameter passing for argument of type 'std::__cxx11::list<double>::const_iterator' {aka 'std::_List_const_iterator<double>'} changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static ncbi::CNcbiMatrix<double>* ncbi::blast::CScorematPssmConverter::GetWeightedResidueFrequencies(const ncbi::objects::CPssmWithParameters&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static ncbi::CNcbiMatrix<double>* ncbi::blast::CScorematPssmConverter::GetFreqRatios(const ncbi::objects::CPssmWithParameters&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
^~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blastp_kmer_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastp_kmer_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void ncbi::blast::CScorematPssmConverter::GetSigma(const ncbi::objects::CPssmWithParameters&, std::vector<double>&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void ncbi::blast::CScorematPssmConverter::GetInformationContent(const ncbi::objects::CPssmWithParameters&, std::vector<double>&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void ncbi::blast::CScorematPssmConverter::GetGaplessColumnWeights(const ncbi::objects::CPssmWithParameters&, std::vector<double>&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/list:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/8/bits/list.tcc: In function 'void ncbi::blast::PsiBlastComputePssmScores(ncbi::CRef<ncbi::objects::CPssmWithParameters>, const ncbi::blast::CBlastOptions&)':
/usr/include/c++/8/bits/list.tcc:247:9: note: parameter passing for argument of type 'std::__cxx11::list<double>::const_iterator' {aka 'std::_List_const_iterator<double>'} changed in GCC 7.1
insert(end(), __new_size, __x);
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:459:46: note: parameter passing for argument of type 'std::__cxx11::list<double>::const_iterator' {aka 'std::_List_const_iterator<double>'} changed in GCC 7.1
freq_ratios.insert(itr, diff, 0.0);
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/blast_test_util.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/blast_test_util.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/version.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
r/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast_advprot_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastp_kmer_options.cpp -o blastp_kmer_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/version.cpp -o version.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-securitIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blastp_kmer_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastp_kmer_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rps_aux.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/search_strategy.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/setup_factory.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/gene_finder.cpp -o gene_finder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_qual_slots.cpp -o flat_qual_slots.o
/bin/rm -f libxformat.so .libxformat.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o alignment_item.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxalnmgr -lxobjutil -ltaxon3 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxformat.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxformat.so
/bin/ln -f .xformat.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xformat.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rps_aux.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rps_aux.cpp:35:
/usr/include/c++/8/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::blast::CBlastRPSAuxInfo> ncbi::blast::CRpsAuxFile::x_ReadFromFile(ncbi::CNcbiIfstream&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/setup_factory.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/prelim_stage.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/uniform_search.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/traceback_stage.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/traceback_stage.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
y -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/setup_factory.cpp -o setup_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/prelim_stage.cpp -o prelim_stage.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/traceback_stage.cpp -o traceback_stage.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/uniform_search.cpp -o uniform_search.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-bIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/Pssm_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/Pssm.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_search.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_results.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_results.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_diag_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_diag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/seqalign__.hpp:1,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_search.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/query_data.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/objmgr_query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgr_query_data.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/objmgr_query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgr_query_data.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp -o showalign_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp -o tabularinof_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -last+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_search.cpp -o local_search.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_results.cpp -o blast_results.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_search.cpp -o remote_search.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/query_data.cpp -o query_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgr_query_data.cpp -o objmgr_query_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgrfree_query_data.cpp -o objmgrfree_query_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp -o bioseq_extract_data_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-mIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgrfree_query_data.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o align_format_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f align_format_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/align_format_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/effsearchspace_calc.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgrfree_query_data.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_seqinfosrc_aux.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_dbindex.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_cxx.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_blk.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_blk.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_cxx.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void ncbi::blast::SplitQuery_SetEffectiveSearchSpace(ncbi::CRef<ncbi::blast::CBlastOptions>, ncbi::CRef<ncbi::blast::IQueryFactory>, ncbi::CRef<ncbi::blast::SInternalData>)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
ap=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/effsearchspace_calc.cpp -o effsearchspace_calc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_blk.cpp -o split_query_blk.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FIIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/seqsrc_seqdb.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/subj_ranges_set.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/subj_ranges_set.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/seedtop.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seedtop.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/cdd_pssm_input.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/cdd_pssm_input.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/seedtop.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seedtop.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int>}; _Tp = std::pair<std::__cxx11::basic_string<char>, long long int>; _Alloc = std::allocator<std::pair<std::__cxx11::basic_string<char>, long long int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/deltablast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Distance = int; _Tp = std::pair<std::__cxx11::basic_string<char>, long long int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
LE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.cpp -o winmask_filter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/subj_ranges_set.cpp -o subj_ranges_set.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp -o rpsblast_local.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seedtop.cpp -o seedtop.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/cdd_pssm_input.cpp -o cdd_pssm_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast_options.cpp -o deltablast_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/nc/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last,
^~~~~~~~~~~
/usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__make_heap(__first, __middle, __comp);
~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'ncbi::CRef<ncbi::blast::CSearchResultSet> ncbi::blast::CLocalRPSBlast::RunThreadedSearch()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/cdd_pssm_input.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/cdd_pssm_input.cpp:38:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = PSICdMsaCellData; _Alloc = std::allocator<PSICdMsaCellData>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<PSICdMsaCellData>::iterator' {aka '__gnu_cxx::__normal_iterator<PSICdMsaCellData*, std::vector<PSICdMsaCellData> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/cdd_pssm_input.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/cdd_pssm_input.cpp:38:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::blast::CCddInputData::CHitSegment::FillData(int, const ncbi::blast::CBlastRPSInfo&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<PSICdMsaCellData*, std::vector<PSICdMsaCellData> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
^~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/deltablast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast_options.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/magicblast_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast_options.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/general/User_object_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/general/User_object.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bi-blast+-2.7.1/c++/src/algo/blast/api/deltablast.cpp -o deltablast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast.cpp -o magicblast.o
/bin/rm -f libxblast.so .libxblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxblast.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxblast.so
/bin/ln -f .xblast.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xblast.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
cd algo/blast/blastinput/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd algo/blast/proteinkmer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=proteinkmer UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput TMPL=blastinput -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmeroptions.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmeroptions.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmerresults.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_scope_src.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_scope_src.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_args.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmerindex.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerindex.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_fasta_input.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:431: warning: ignoring #pragma ivdep [-Wunknown-pragmas]
#pragma ivdep
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_fasta_input.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp: In function 'void ncbi::neighbor_query(const std::vector<std::vector<unsigned int> >&, const uint64_t*, std::vector<std::set<unsigned int> >&, ncbi::blast::CMinHashFile&, int, int, double, ncbi::TBlastKmerPrelimScoreVector&, ncbi::BlastKmerStats&, int)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:791:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (last_oid == *i)
~~~~~~~~~^~~~~
In file included from /usr/include/c++/8/map:60,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<unsigned int, double>}; _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/8/bits/vector.tcc:172:5: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:172:5: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmerresults.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<ncbi::CRef<ncbi::objects::CSeq_id, ncbi::CObjectCounterLocker>, double>&}; _Tp = std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double>; _Alloc = std::allocator<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double>*, std::vector<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmerresults.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::blast::CBlastKmerResults::x_InitScoreVec(ncbi::TBlastKmerPrelimScoreVector&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double>*, std::vector<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Distance = int; _Tp = std::pair<unsigned int, double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/usr/include/c++/8/bits/stl_map.h: In function 'void ncbi::neighbor_query(const std::vector<std::vector<unsigned int> >&, const uint64_t*, std::vector<std::set<unsigned int> >&, ncbi::blast::CMinHashFile&, int, int, double, ncbi::TBlastKmerPrelimScoreVector&, ncbi::BlastKmerStats&, int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::blast::CBlastKmerResultsSet> ncbi::blast::CBlastKmer::x_SearchMultipleQueries(int, int, const ncbi::SBlastKmerParameters&, uint32_t*, uint32_t*, std::vector<std::vector<int> >&, std::vector<int>)':
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >'} changed in GCC 7.1
_M_range_insert(__pos, __first, __last,
^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
^
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
^
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:84: warning: ignoring #pragma ivdep [-Wunknown-pragmas]
#pragma ivdep
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:91: warning: ignoring #pragma ivdep [-Wunknown-pragmas]
#pragma ivdep
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:98: warning: ignoring #pragma ivdep [-Wunknown-pragmas]
#pragma ivdep
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp -o blastkmer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerindex.cpp -o blastkmerindex.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmeroptions.cpp -o blastkmeroptions.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp -o blastkmerresults.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp -o blastkmerutils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp -o mhfile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -WerroIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/cmdline_flags.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/cmdline_flags.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/mhfile.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_args.cpp:39:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp: In member function 'void ncbi::blast::CMinHashFile::GetMinHits(int, int&, std::vector<unsigned int>&) const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:77:18: warning: comparison of integer expressions of different signedness: 'std::vector<unsigned int>::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare]
if (hits.size() < numHashes)
~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/pearson.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/pearson.cpp:38:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input.cpp -o blast_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_fasta_input.cpp -o blast_fasta_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_scope_src.cpp -o blast_scope_src.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_args.cpp -o blast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/cmdline_flags.cpp -o cmdline_flags.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input_aux.cpp -o blast_input_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbiIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_input_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input_aux.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blastp_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastp_args.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'virtual void ncbi::blast::CMappingArgs::ExtractAlgorithmOptions(const ncbi::CArgs&, ncbi::blast::CBlastOptions&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/kblastapi.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blastn_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastn_args.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_input_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input_aux.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/rmblastn_args.hpp:21,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rmblastn_args.cpp:20:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blastx_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastx_args.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/tblastn_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastn_args.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/tblastx_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastx_args.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
r=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/pearson.cpp -o pearson.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/kblastapi.cpp -o kblastapi.o
/bin/rm -f libproteinkmer.so .libproteinkmer.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libproteinkmer.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastkmer.o blastkmerindex.o blastkmeroptions.o blastkmerresults.o blastkmerutils.o mhfile.o pearson.o kblastapi.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libproteinkmer.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libproteinkmer.so
/bin/ln -f .proteinkmer.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.proteinkmer.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
cd algo/blast/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblastformat UNIX_PROJ="" sources= configurables=configurables.null
cd algo/blast/igblast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=proteinkmer_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/igblast TMPL=igblast -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format TMPL=xblastformat -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blastfmtutil.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastfmtutil.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml2_format.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/igblast/igblast.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/igblast/igblast.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml2_format.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp: In function 'void ncbi::s_SeqAlignSetToXMLHits(std::__cxx11::list<ncbi::CRef<ncbi::objects::CHit> >&, const ncbi::objects::CSeq_align_set&, ncbi::objects::CScope*, const ncbi::CBlastFormattingMatrix*, const ncbi::TMaskedQueryRegions*, bool, int, int, ncbi::CNcbiOstream*)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:501:86: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations]
auto_ptr<CObjectOStreamXml> xml_one_hit_os (new CObjectOStreamXml (one_hit_os,false));
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/objostrxml.hpp:66:26: note: declared here
NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut));
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimisc.hpp:1099:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR'
# define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED
^~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp: In function 'bool ncbi::s_SerializeAndSplitBy(const ncbi::CSerialObject&, const char*, std::__cxx11::string&, std::__cxx11::string&, bool, bool)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:785:89: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations]
auto_ptr<CObjectOStreamXml> xml_one_iter_os(new CObjectOStreamXml (one_iter_ss_os,false));
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/objostrxml.hpp:66:26: note: declared here
NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut));
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimisc.hpp:1099:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR'
# define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED
^~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:49:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:51:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp: In member function 'void ncbi::CBlastFormat::x_SplitSeqAlign(ncbi::CConstRef<ncbi::objects::CSeq_align_set>, ncbi::objects::CSeq_align_set&, ncbi::objects::CSeq_align_set&, ncbi::blast::CPsiBlastIterationState::TSeqIds&)':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:520:18: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if(count >= m_NumSummary)
~~~~~~^~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:37:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<unsigned int, double>&}; _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastp_args.cpp -o blastp_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastn_args.cpp -o blastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rmblastn_args.cpp -o rmblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastx_args.cpp -o blastx_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastn_args.cpp -o tblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastx_args.cpp -o tblastx_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -WIn file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_assign_aux(_ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator<ncbi::align_format::CAlignFormatUtil::SDbInfo>]':
/usr/include/c++/8/bits/vector.tcc:288:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:288:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ncbi::CBlastFormat::CBlastFormat(const ncbi::blast::CBlastOptions&, const std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo>&, ncbi::blast::CFormattingArgs::EOutputFormat, bool, ncbi::CNcbiOstream&, int, int, ncbi::objects::CScope&, bool, bool, bool, const string&, bool, const string&)':
/usr/include/c++/8/bits/stl_vector.h:1512:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
{ _M_assign_aux(__first, __last, std::__iterator_category(__first)); }
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:37:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void proteinkmers::KmerResults::test_method()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void proteinkmers::KmerResultsSetPushBack::test_method()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastfmtutil.cpp -o blastfmtutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp -o blastxml_format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml2_format.cpp -o blastxml2_format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp -o blast_format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp -o data4xmlformat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp -o data4xml2format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-m/usr/include/c++/8/bits/stl_vector.h: In member function 'void proteinkmers::KmerResultsSet::test_method()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/rpstblastn_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpstblastn_args.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/igblastn_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastn_args.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/rpsblast_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpsblast_args.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/psiblast_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/psiblast_args.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/build_archive.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/vecscreen_run.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/vecscreen_run.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
date-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/psiblast_args.cpp -o psiblast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpsblast_args.cpp -o rpsblast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpstblastn_args.cpp -o rpstblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastn_args.cpp -o igblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastp_args.cpp -o igblastp_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blasIn file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/deltablast_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/deltablast_args.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/kblastp_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/kblastp_args.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/igblastp_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastp_args.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/format/sam_formatter.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/sam.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/sam.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/magicblast_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/magicblast_args.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_async_format.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/magicblast_args.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/magicblast_args.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_async_format.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp: In member function 'virtual void* CBlastAsyncFormatThread::Main()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp:122:28: warning: comparison of integer expressions of different signedness: 'std::map<int, std::vector<SFormatResultValues> >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare]
if (m_ResultsMap.size() != currNum)
~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o
/bin/rm -f libigblast.so .libigblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libigblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC igblast.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libigblast.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libigblast.so
/bin/ln -f .igblast.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.igblast.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_asn1_input.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ap=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/build_archive.cpp -o build_archive.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/vecscreen_run.cpp -o vecscreen_run.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/sam.cpp -o sam.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp -o blast_async_format.o
/bin/rm -f libxblastformat.so .libxblastformat.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxblastformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastfmtutil.o blastxml_format.o blastxml2_format.o blast_format.o data4xmlformat.o data4xml2format.o build_archive.o vecscreen_run.o sam.o blast_async_format.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxformat -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lalign_format -lblastxml -lblastxml2 -lxhtml -lxcgi -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxblastformat.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libxblastformat.so
/bin/ln -f .xblastformat.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.xblastformat.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_asn1_input.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
t+-2.7.1/c++/src/algo/blast/blastinput/magicblast_args.cpp -o magicblast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/kblastp_args.cpp -o kblastp_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o
/bin/rm -f libblastinput.so .libblastinput.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastinput.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxblast -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lseqdb -lxobjread -lxobjread -lvariation -lcreaders -lsubmit -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxutil -lncbi_xloader_genbank -lncbi_xreader_id2 -lncbi_xreader -lscoremat -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastinput.so /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastinput.so
/bin/ln -f .blastinput.dep /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/status/.blastinput.dep
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie aalookup_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o aalookup_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f aalookup_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f aalookup_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/aalookup_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdiag_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastdiag_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdiag_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdiag_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdiag_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie aascan_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o aascan_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f aascan_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f aascan_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/aascan_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:452:33: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
options->SetFilterString("L"); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:53:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastextend_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastextend_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastextend_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastextend_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastengine_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastengine_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastengine_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastengine_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastengine_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::RemoteOptionsTest::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:73:60: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
BOOST_CHECK_NO_THROW(opts.SetFilterString("m L", false)); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:146:9: note: in definition of macro 'BOOST_CHECK_NO_THROW_IMPL'
S; \
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testRemoteFilterString::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1329:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1333:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1338:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1340:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1344:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1346:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1350:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1352:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1356:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1358:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
In file included from /usr/include/boost/test/test_tools.hpp:45,
from /usr/include/boost/test/unit_test.hpp:18,
from /usr/include/boost/test/auto_unit_test.hpp:16,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:67,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testOptionsDeepCopy::test_method()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1397:57: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
BOOST_CHECK_EQUAL(string(optsClone->GetFilterString()), string("L;m;")); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o proteinkmer_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f proteinkmer_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/proteinkmer_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp -o blasthits_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blasthits_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blasthits_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blasthits_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blasthits_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blasthits_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastoptions_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastoptions_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastoptions_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastoptions_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastoptions_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxconnect -lxncbi -ldl -lm -lpthread -o gapinfo_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f gapinfo_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/gapinfo_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp -o blastfilter_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastfilter_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastfilter_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastfilter_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastfilter_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastfilter_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie delta_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o delta_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f delta_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/delta_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspfilter_besthit_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspfilter_besthit_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_besthit_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f hspfilter_besthit_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/hspfilter_besthit_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o gencode_singleton_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gencode_singleton_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f gencode_singleton_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/gencode_singleton_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_test_util.hpp:41,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspfilter_culling_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspfilter_culling_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_culling_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f hspfilter_culling_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/hspfilter_culling_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp:32:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastsetup_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastsetup_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastsetup_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastsetup_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastsetup_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=msa2pssm_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp -o hspstream_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp -o hspstream_test_util.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspstream_unit_test.o hspstream_test_util.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspstream_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspstream_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f hspstream_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/hspstream_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie linkhsp_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o linkhsp_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f linkhsp_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f linkhsp_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/linkhsp_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie msa2pssm_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o msa2pssm_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f msa2pssm_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f msa2pssm_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/msa2pssm_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp -o magicblast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie magicblast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -lm -lpthread -o magicblast_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f magicblast_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f magicblast_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/magicblast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp -o ntlookup_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie ntlookup_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o ntlookup_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntlookup_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f ntlookup_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/ntlookup_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o phiblast_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f phiblast_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/phiblast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psibl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie ntscan_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o ntscan_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f ntscan_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/ntscan_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psiblast_iteration_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o prelimsearch_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f prelimsearch_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/prelimsearch_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie optionshandle_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o optionshandle_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f optionshandle_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f optionshandle_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/optionshandle_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psibl2seq_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f psibl2seq_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/psibl2seq_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psiblast_iteration_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_iteration_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f psiblast_iteration_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/psiblast_iteration_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = PSICdMsaCellData; _Alloc = std::allocator<PSICdMsaCellData>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<PSICdMsaCellData>::iterator' {aka '__gnu_cxx::__normal_iterator<PSICdMsaCellData*, std::vector<PSICdMsaCellData> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'CPssmInputWithSingleCD::CPssmInputWithSingleCD()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<PSICdMsaCellData*, std::vector<PSICdMsaCellData> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void PssmEngineFreqRatios::AllZerosFreqRatios::test_method()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
^~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp -o pssmenginefreqratios_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie pssmenginefreqratios_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmenginefreqratios_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmenginefreqratios_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f pssmenginefreqratios_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/pssmenginefreqratios_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=queryinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psiblast_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f psiblast_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/psiblast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmcreate_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f pssmcreate_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/pssmcreate_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=remote_blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie querydata_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o querydata_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f querydata_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/querydata_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie queryinfo_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o queryinfo_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f queryinfo_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/queryinfo_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o redoalignment_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f redoalignment_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/redoalignment_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rps_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o rps_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f rps_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/rps_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o scoreblk_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f scoreblk_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/scoreblk_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqsrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/random_gen.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o seqinfosrc_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqinfosrc_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/seqinfosrc_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/util/random_gen.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie remote_blast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o remote_blast_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f remote_blast_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/remote_blast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie search_strategy_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o search_strategy_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f search_strategy_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/search_strategy_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=stat_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp -o setupfactory_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie setupfactory_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o setupfactory_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f setupfactory_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f setupfactory_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/setupfactory_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp -o seqsrc_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp -o seqsrc_mock.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp -o mockseqsrc1_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp -o mockseqsrc2_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqsrc_unit_test.o seqsrc_mock.o mockseqsrc1_unit_test.o mockseqsrc2_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedmake[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp -o stat_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie stat_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o stat_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f stat_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f stat_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/stat_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/seqsrc_seqdb.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/subj_ranges_set.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp:37:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
line -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o seqsrc_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqsrc_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqsrc_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/seqsrc_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp -o subj_ranges_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie subj_ranges_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o subj_ranges_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f subj_ranges_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f subj_ranges_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/subj_ranges_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp -o tracebacksearch_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tracebacksearch_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o tracebacksearch_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f tracebacksearch_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f tracebacksearch_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/tracebacksearch_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie traceback_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o traceback_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f traceback_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f traceback_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/traceback_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o split_query_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f split_query_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/split_query_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie version_reference_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o version_reference_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f version_reference_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f version_reference_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/version_reference_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blast_formatter -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blast_formatter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I../ /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp -o bdbloader_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie bdbloader_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o bdbloader_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f bdbloader_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f bdbloader_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/bdbloader_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blastn -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blastn_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blast_formatter.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie uniform_search_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o uniform_search_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f uniform_search_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f uniform_search_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/uniform_search_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blastp -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blastp_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blastn_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blastp_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_formatter.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blast_formatter
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_formatter /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blast_formatter /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_formatter
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blastx -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blastn_app.cpp -o blastn_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastn_app.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lxformat -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxregexp -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastn
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastn
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=deltablast -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blastx_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/deltablast_app.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp -o seqalignfilter_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp -o blastfmtutil_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp -o build_archive_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp -o vecscreen_run_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp -o blast_format_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o blast_format_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o blast_format_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_format_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blast_format_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_format_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=psiblast -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blastp_app.cpp -o blastp_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastp_app.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastp
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastp /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastp
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=rpsblast -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/psiblast_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/rpsblast_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blastx_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/deltablast_app.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/psiblast_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/rpsblast_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/blastx_app.cpp -o blastx_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastx_app.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastx
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastx /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastx /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastx
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=rpstblastn -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/rpstblastn_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rpsblast_app.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o rpsblast
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f rpsblast /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/rpsblast
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=seedtop -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie deltablast_app.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o deltablast
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f deltablast /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f deltablast /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/deltablast
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=tblastn -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/seedtop_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/rpstblastn_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o psiblast
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f psiblast /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/psiblast
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=tblastx -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/tblastn_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/tblastx_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/seedtop_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/tblastn_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/tblastx_app.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/rpstblastn_app.cpp -o rpstblastn_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rpstblastn_app.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o rpstblastn
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpstblastn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f rpstblastn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/rpstblastn
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdb_aliastool.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o seedtop
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seedtop /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/seedtop
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdbcheck -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tblastx_app.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o tblastx
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastx /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f tblastx /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/tblastx
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdbcmd -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tblastn_app.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o tblastn
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f tblastn /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/tblastn
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdbcp -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcheck.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcmd.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdb_aliastool.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdb_aliastool.cpp:35:
/usr/include/c++/8/bits/stl_vector.h: In member function 'int CBlastDBAliasApp::ConvertGiFile(ncbi::CNcbiIstream&, ncbi::CNcbiOstream&, const string*, const string*) const':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcp.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcmd.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdb_aliastool.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdb_aliastool
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdb_aliastool /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdb_aliastool
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=convert2blastmask -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/convert2blastmask.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/convert2blastmask.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcp.cpp -o blastdbcp.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcp.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lwritedb -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxser -lxcgi -lxhtml -lxconnect -lxutil -lxncbi -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdbcp
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcp /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdbcp /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdbcp
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=makeblastdb -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/build_db.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/masked_range_set.hpp:33,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/masked_range_set.cpp:31:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcheck.cpp -o blastdbcheck.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcheck.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdbcheck
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcheck /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdbcheck /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdbcheck
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=makeprofiledb -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie convert2blastmask.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o convert2blastmask
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f convert2blastmask /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f convert2blastmask /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/convert2blastmask
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd app/segmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcmd.cpp -o blastdbcmd.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcmd.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdbcmd
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcmd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdbcmd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdbcmd
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/segmasker TMPL=segmasker -w -j4 --jobserver-auth=7,8 all
cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeprofiledb.cpp:36:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/segmasker/segmasker.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp: In member function 'void CMakeBlastDBApp::x_BuildDatabase()':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp:1126:15: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long long unsigned int'} and 'long int' [-Wsign-compare]
if (bytes >= (1L << 31)) {
~~~~~~^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/segmasker/segmasker.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:34:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/segmasker/segmasker.cpp -o segmasker.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie segmasker.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjsimple -lxalgosegmask -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o segmasker
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f segmasker /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/segmasker
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeprofiledb.cpp -o makeprofiledb.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie makeprofiledb.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o makeprofiledb
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeprofiledb /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f makeprofiledb /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/makeprofiledb
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp -o makeblastdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/app/blastdb/masked_range_set.cpp -o masked_range_set.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie makeblastdb.o masked_range_set.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o makeblastdb
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeblastdb /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f makeblastdb /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/makeblastdb
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp:39:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:35:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blast_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blast_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie bl2seq_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o bl2seq_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f bl2seq_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f bl2seq_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/bl2seq_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp -o blastinput_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp -o blast_scope_src_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastinput_unit_test.o blast_scope_src_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lentrez2cli -lentrez2 -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastinput_unit_test
/bin/bash /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastinput_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastinput_unit_test /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/bin/blastinput_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
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make[1]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1'
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1'
dh_auto_test
cd c\+\+ && /usr/bin/make V=1 -j1 check VERBOSE=1
make[2]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++'
if test -s ""; then \
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make -w -j1 check_p RUN_CHECK=Y; \
else \
cd /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make -w -j1 check_r RUN_CHECK=Y; \
fi
make[3]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build'
======================================================================
make[4]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build'
/usr/bin/make -C corelib -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/bin/echo 'Warning: non-existent sub-project "test"'
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make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make -C util -w -j1 check_add_r || exit 5
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/usr/bin/make -C regexp -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
NOTE: Skipping project regexp due to unmet requirements:
LocalPCRE
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/regexp TMPL=regexp -w -j1 mark-as-disabled
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/usr/bin/make -C xregexp -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
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/usr/bin/make -C compress -w -j1 check_add_r || exit 5
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/usr/bin/make -C bzip2 -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2'
NOTE: Skipping project bzip2 due to unmet requirements:
LocalBZ2
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/bzip2 TMPL=bzip2 -w -j1 mark-as-disabled
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/usr/bin/make -C zlib -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib'
NOTE: Skipping project zlib due to unmet requirements:
LocalZ
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/util/compress/zlib TMPL=zlib -w -j1 mark-as-disabled
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/usr/bin/make -C api -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[7]: Nothing to be done for 'check_add_r'.
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/bin/echo 'Warning: non-existent sub-project "diff"'
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/usr/bin/make -C tables -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/bin/echo 'Warning: non-existent sub-project "test"'
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make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/usr/bin/make -C creaders -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[6]: Nothing to be done for 'check_add_r'.
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/usr/bin/make -C sequtil -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
/usr/bin/make -C bitset -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/bitset'
/bin/echo 'Warning: non-existent sub-project "test"'
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make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util/bitset'
/bin/echo 'Warning: non-existent sub-project "qparse"'
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/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
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Warning: non-existent sub-project "demo"
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/util'
/usr/bin/make -C connect -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/make -C services -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect/services'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect/services'
/bin/echo 'Warning: non-existent sub-project "ext"'
Warning: non-existent sub-project "ext"
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "daemons"'
Warning: non-existent sub-project "daemons"
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/make -C cgi -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/usr/bin/make -C html -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/html'
/usr/bin/make -C build-system -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system'
/usr/bin/make -C helpers -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
SKIP -- build-system/helpers/run_with_lock
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
/usr/bin/make -C project_tree_builder -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
SKIP -- build-system/project_tree_builder/project_tree_builder
/usr/bin/make -C msbuild -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
NOTE: Skipping project msbuild due to unmet requirements:
MSWin
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
/usr/bin/make -f /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -w -j1 mark-as-disabled
make[9]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[9]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/build-system'
/usr/bin/make -C serial -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
/usr/bin/make -C datatool -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
TEST -- serial/datatool/datatool
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "soap"'
Warning: non-existent sub-project "soap"
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
/usr/bin/make -C db -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/db'
/usr/bin/make -C sqlite -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/db/sqlite'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/db/sqlite'
/bin/echo 'Warning: non-existent sub-project "bdb"'
Warning: non-existent sub-project "bdb"
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/db'
/bin/echo 'Warning: non-existent sub-project "dbapi"'
Warning: non-existent sub-project "dbapi"
/usr/bin/make -C objects -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects'
/usr/bin/make -C general -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
/usr/bin/make -C biblio -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
/usr/bin/make -C medline -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
/usr/bin/make -C pub -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
/usr/bin/make -C seqcode -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
/usr/bin/make -C seq -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/make -C seqset -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
/usr/bin/make -C submit -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
/usr/bin/make -C seqedit -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
/usr/bin/make -C seqsplit -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
/usr/bin/make -C id1 -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/usr/bin/make -C id2 -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
/usr/bin/make -C entrez2 -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/make -C pubmed -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
/usr/bin/make -C medlars -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
/usr/bin/make -C mla -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/make -C proj -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/proj'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/proj'
/usr/bin/make -C scoremat -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
/usr/bin/make -C blast -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/make -C blastdb -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
/usr/bin/make -C blastxml -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
/usr/bin/make -C blastxml2 -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
/usr/bin/make -C mmdb -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mmdb'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mmdb'
/usr/bin/make -C cn3d -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cn3d'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cn3d'
/usr/bin/make -C cdd -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cdd'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cdd'
/usr/bin/make -C ncbimime -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/ncbimime'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/ncbimime'
/usr/bin/make -C pcsubstance -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcsubstance'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcsubstance'
/usr/bin/make -C pcassay -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcassay'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcassay'
/usr/bin/make -C gbseq -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
/usr/bin/make -C insdseq -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/insdseq'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/insdseq'
/usr/bin/make -C tinyseq -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/tinyseq'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/tinyseq'
/usr/bin/make -C biotree -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biotree'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biotree'
/usr/bin/make -C entrezgene -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrezgene'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrezgene'
/usr/bin/make -C omssa -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/omssa'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/omssa'
/usr/bin/make -C remap -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/remap'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/remap'
/usr/bin/make -C seqtest -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqtest'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqtest'
/usr/bin/make -C taxon1 -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
/usr/bin/make -C taxon3 -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
/usr/bin/make -C gbproj -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbproj'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbproj'
/usr/bin/make -C trackmgr -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/trackmgr'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/trackmgr'
/usr/bin/make -C valerr -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valerr'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valerr'
/usr/bin/make -C valid -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
/usr/bin/make -C access -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/access'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/access'
/usr/bin/make -C docsum -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/docsum'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/docsum'
/usr/bin/make -C featdef -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/featdef'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/featdef'
/usr/bin/make -C genomecoll -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/make -C gc_cli -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll/gc_cli'
TEST -- objects/genomecoll/gc_cli/gc_cli
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll/gc_cli'
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/make -C homologene -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/homologene'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/homologene'
/usr/bin/make -C mim -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mim'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mim'
/usr/bin/make -C objprt -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/objprt'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/objprt'
/usr/bin/make -C variation -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
/usr/bin/make -C macro -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/macro'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/macro'
/usr/bin/make -C genesbyloc -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genesbyloc'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genesbyloc'
/usr/bin/make -C coords -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/coords'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/coords'
/usr/bin/make -C varrep -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/varrep'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects/varrep'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objects'
/usr/bin/make -C objmgr -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/usr/bin/make -C util -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
/usr/bin/make -C split -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/usr/bin/make -C objtools -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools'
/bin/echo 'Warning: non-existent sub-project "unit_test_util"'
Warning: non-existent sub-project "unit_test_util"
/usr/bin/make -C readers -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
/bin/echo 'Warning: non-existent sub-project "app"'
Warning: non-existent sub-project "app"
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
/usr/bin/make -C blast -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast'
/usr/bin/make -C seqdb_reader -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make -C demo -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
SKIP -- objtools/blast/seqdb_reader/demo/seqdb_demo
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/make -C test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
TEST -- objtools/blast/seqdb_reader/test/seqdb_perf
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make -C seqdb_writer -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
TEST -- objtools/blast/seqdb_writer/unit_test/writedb_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -C gene_info_reader -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/make -C demo -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
TEST -- objtools/blast/gene_info_reader/unit_test/gene_info_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/bin/echo 'Warning: non-existent sub-project "gene_info_writer"'
Warning: non-existent sub-project "gene_info_writer"
/usr/bin/make -C services -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
SKIP -- objtools/blast/services/unit_test/blast_services_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -C blastdb_format -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
TEST -- objtools/blast/blastdb_format/unit_test/blastdb_format_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast'
/bin/echo 'Warning: non-existent sub-project "lds2"'
Warning: non-existent sub-project "lds2"
/usr/bin/make -C data_loaders -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders'
/usr/bin/make -C genbank -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make -C cache -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/bin/echo 'Warning: non-existent sub-project "pubseq"'
Warning: non-existent sub-project "pubseq"
/usr/bin/make -C id2 -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/make -C id1 -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/bin/echo 'Warning: non-existent sub-project "pubseq2"'
Warning: non-existent sub-project "pubseq2"
/usr/bin/make -C gicache -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/bin/echo 'Warning: non-existent sub-project "lds2"'
Warning: non-existent sub-project "lds2"
/usr/bin/make -C blastdb -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/bin/echo 'Warning: non-existent sub-project "patcher"'
Warning: non-existent sub-project "patcher"
/bin/echo 'Warning: non-existent sub-project "asn_cache"'
Warning: non-existent sub-project "asn_cache"
/bin/echo 'Warning: non-existent sub-project "cdd"'
Warning: non-existent sub-project "cdd"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders'
/usr/bin/make -C simple -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
/usr/bin/make -C alnmgr -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
/bin/echo 'Warning: non-existent sub-project "cddalignview"'
Warning: non-existent sub-project "cddalignview"
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "manip"'
Warning: non-existent sub-project "manip"
/usr/bin/make -C cleanup -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/usr/bin/make -C format -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
/usr/bin/make -C edit -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/edit'
/bin/echo 'Warning: non-existent sub-project "protein_match"'
Warning: non-existent sub-project "protein_match"
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/edit'
/bin/echo 'Warning: non-existent sub-project "validator"'
Warning: non-existent sub-project "validator"
/bin/echo 'Warning: non-existent sub-project "asniotest"'
Warning: non-existent sub-project "asniotest"
/bin/echo 'Warning: non-existent sub-project "align"'
Warning: non-existent sub-project "align"
/usr/bin/make -C seqmasks_io -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/bin/echo 'Warning: non-existent sub-project "eutils"'
Warning: non-existent sub-project "eutils"
/usr/bin/make -C align_format -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
TEST -- objtools/align_format/unit_test/align_format_unit_test
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
/bin/echo 'Warning: non-existent sub-project "snputil"'
Warning: non-existent sub-project "snputil"
/bin/echo 'Warning: non-existent sub-project "uudutil"'
Warning: non-existent sub-project "uudutil"
/bin/echo 'Warning: non-existent sub-project "variation"'
Warning: non-existent sub-project "variation"
/bin/echo 'Warning: non-existent sub-project "writers"'
Warning: non-existent sub-project "writers"
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/objtools'
/bin/echo 'Warning: non-existent sub-project "ctools"'
Warning: non-existent sub-project "ctools"
/bin/echo 'Warning: non-existent sub-project "sra"'
Warning: non-existent sub-project "sra"
/usr/bin/make -C algo -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo'
/usr/bin/make -C dustmask -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
/usr/bin/make -C winmask -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
/bin/echo 'Warning: non-existent sub-project "sequence"'
Warning: non-existent sub-project "sequence"
/usr/bin/make -C blast -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast'
/usr/bin/make -C composition_adjustment -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/make -C core -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
/usr/bin/make -C dbindex -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make -C makeindex -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
SKIP -- algo/blast/dbindex/makeindex/makeindex
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/bin/echo 'Warning: non-existent sub-project "dbindex_search"'
Warning: non-existent sub-project "dbindex_search"
/usr/bin/make -C api -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
/usr/bin/make -C proteinkmer -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
TEST -- algo/blast/proteinkmer/unit_test/proteinkmer_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
/usr/bin/make -C format -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
/usr/bin/make -C blastinput -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
TEST -- algo/blast/blastinput/unit_test/blastinput_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
/bin/echo 'Warning: non-existent sub-project "blast_sra_input"'
Warning: non-existent sub-project "blast_sra_input"
/usr/bin/make -C igblast -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
/bin/echo 'Warning: non-existent sub-project "gumbel_params"'
Warning: non-existent sub-project "gumbel_params"
/usr/bin/make -C unit_tests -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests'
/usr/bin/make -C blast_format -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
TEST -- algo/blast/unit_tests/blast_format/blast_format_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/make -C blastdb -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
TEST -- algo/blast/unit_tests/blastdb/bdbloader_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/make -C seqdb_reader -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
TEST -- algo/blast/unit_tests/seqdb_reader/seqdb_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/make -C api -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
TEST -- algo/blast/unit_tests/api/blast_unit_test
TEST -- algo/blast/unit_tests/api/aalookup_unit_test
TEST -- algo/blast/unit_tests/api/seqsrc_unit_test
TEST -- algo/blast/unit_tests/api/delta_unit_test
TEST -- algo/blast/unit_tests/api/ntlookup_unit_test
TEST -- algo/blast/unit_tests/api/seqinfosrc_unit_test
TEST -- algo/blast/unit_tests/api/setupfactory_unit_test
TEST -- algo/blast/unit_tests/api/search_strategy_unit_test
TEST -- algo/blast/unit_tests/api/redoalignment_unit_test
TEST -- algo/blast/unit_tests/api/queryinfo_unit_test
TEST -- algo/blast/unit_tests/api/querydata_unit_test
TEST -- algo/blast/unit_tests/api/pssmenginefreqratios_unit_test
TEST -- algo/blast/unit_tests/api/blastsetup_unit_test
TEST -- algo/blast/unit_tests/api/blastextend_unit_test
TEST -- algo/blast/unit_tests/api/blastdiag_unit_test
TEST -- algo/blast/unit_tests/api/pssmcreate_unit_test
TEST -- algo/blast/unit_tests/api/psiblast_iteration_unit_test
TEST -- algo/blast/unit_tests/api/hspfilter_besthit_unit_test
TEST -- algo/blast/unit_tests/api/hspfilter_culling_unit_test
TEST -- algo/blast/unit_tests/api/optionshandle_unit_test
TEST -- algo/blast/unit_tests/api/msa2pssm_unit_test
TEST -- algo/blast/unit_tests/api/tracebacksearch_unit_test
TEST -- algo/blast/unit_tests/api/traceback_unit_test
TEST -- algo/blast/unit_tests/api/psibl2seq_unit_test
TEST -- algo/blast/unit_tests/api/psiblast_unit_test
TEST -- algo/blast/unit_tests/api/prelimsearch_unit_test
TEST -- algo/blast/unit_tests/api/phiblast_unit_test
TEST -- algo/blast/unit_tests/api/split_query_unit_test
TEST -- algo/blast/unit_tests/api/scoreblk_unit_test
TEST -- algo/blast/unit_tests/api/hspstream_unit_test
TEST -- algo/blast/unit_tests/api/rps_unit_test
TEST -- algo/blast/unit_tests/api/gapinfo_unit_test
TEST -- algo/blast/unit_tests/api/blasthits_unit_test
TEST -- algo/blast/unit_tests/api/linkhsp_unit_test
TEST -- algo/blast/unit_tests/api/blastengine_unit_test
TEST -- algo/blast/unit_tests/api/subj_ranges_unit_test
TEST -- algo/blast/unit_tests/api/version_reference_unit_test
TEST -- algo/blast/unit_tests/api/ntscan_unit_test
TEST -- algo/blast/unit_tests/api/aascan_unit_test
TEST -- algo/blast/unit_tests/api/remote_blast_unit_test
TEST -- algo/blast/unit_tests/api/uniform_search_unit_test
TEST -- algo/blast/unit_tests/api/blastfilter_unit_test
TEST -- algo/blast/unit_tests/api/blastoptions_unit_test
TEST -- algo/blast/unit_tests/api/gencode_singleton_unit_test
TEST -- algo/blast/unit_tests/api/bl2seq_unit_test
TEST -- algo/blast/unit_tests/api/stat_unit_test
TEST -- algo/blast/unit_tests/api/magicblast_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests'
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast'
/usr/bin/make -C segmask -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
/bin/echo 'Warning: non-existent sub-project "align"'
Warning: non-existent sub-project "align"
/bin/echo 'Warning: non-existent sub-project "structure"'
Warning: non-existent sub-project "structure"
/bin/echo 'Warning: non-existent sub-project "ms"'
Warning: non-existent sub-project "ms"
/bin/echo 'Warning: non-existent sub-project "gnomon"'
Warning: non-existent sub-project "gnomon"
/bin/echo 'Warning: non-existent sub-project "tree"'
Warning: non-existent sub-project "tree"
/bin/echo 'Warning: non-existent sub-project "phy_tree"'
Warning: non-existent sub-project "phy_tree"
/bin/echo 'Warning: non-existent sub-project "seqqa"'
Warning: non-existent sub-project "seqqa"
/bin/echo 'Warning: non-existent sub-project "cobalt"'
Warning: non-existent sub-project "cobalt"
/bin/echo 'Warning: non-existent sub-project "text"'
Warning: non-existent sub-project "text"
/bin/echo 'Warning: non-existent sub-project "volume_merge"'
Warning: non-existent sub-project "volume_merge"
/bin/echo 'Warning: non-existent sub-project "primer"'
Warning: non-existent sub-project "primer"
/bin/echo 'Warning: non-existent sub-project "id_mapper"'
Warning: non-existent sub-project "id_mapper"
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo'
/usr/bin/make -C misc -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/misc'
/usr/bin/make -C third_party -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party'
/usr/bin/make -C third_party_static -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static'
NOTE: Skipping project third_party_static due to unmet requirements:
-DLL
make[7]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static'
make[7]: Nothing to be done for 'mark-as-disabled_r'.
make[7]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static'
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static'
/bin/echo 'Warning: non-existent sub-project "clog"'
Warning: non-existent sub-project "clog"
/bin/echo 'Warning: non-existent sub-project "grid_cgi"'
Warning: non-existent sub-project "grid_cgi"
/bin/echo 'Warning: non-existent sub-project "xmlwrapp"'
Warning: non-existent sub-project "xmlwrapp"
/bin/echo 'Warning: non-existent sub-project "eutils_client"'
Warning: non-existent sub-project "eutils_client"
/bin/echo 'Warning: non-existent sub-project "hydra_client"'
Warning: non-existent sub-project "hydra_client"
/bin/echo 'Warning: non-existent sub-project "discrepancy"'
Warning: non-existent sub-project "discrepancy"
/bin/echo 'Warning: non-existent sub-project "xmlreaders"'
Warning: non-existent sub-project "xmlreaders"
/bin/echo 'Warning: non-existent sub-project "hgvs"'
Warning: non-existent sub-project "hgvs"
/bin/echo 'Warning: non-existent sub-project "netstorage"'
Warning: non-existent sub-project "netstorage"
/bin/echo 'Warning: non-existent sub-project "jsonwrapp"'
Warning: non-existent sub-project "jsonwrapp"
/bin/echo 'Warning: non-existent sub-project "biosample_util"'
Warning: non-existent sub-project "biosample_util"
/bin/echo 'Warning: non-existent sub-project "data_loaders_util"'
Warning: non-existent sub-project "data_loaders_util"
/bin/echo 'Warning: non-existent sub-project "lapackwrapp"'
Warning: non-existent sub-project "lapackwrapp"
/bin/echo 'Warning: non-existent sub-project "pmcidconv_client"'
Warning: non-existent sub-project "pmcidconv_client"
/bin/echo 'Warning: non-existent sub-project "grpc_integration"'
Warning: non-existent sub-project "grpc_integration"
/bin/echo 'Warning: non-existent sub-project "cgi_redirect"'
Warning: non-existent sub-project "cgi_redirect"
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/misc'
/bin/echo 'Warning: non-existent sub-project "gui"'
Warning: non-existent sub-project "gui"
/usr/bin/make -C app -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app'
/bin/echo 'Warning: non-existent sub-project "asn2asn"'
Warning: non-existent sub-project "asn2asn"
/bin/echo 'Warning: non-existent sub-project "asn2fasta"'
Warning: non-existent sub-project "asn2fasta"
/bin/echo 'Warning: non-existent sub-project "asn2flat"'
Warning: non-existent sub-project "asn2flat"
/bin/echo 'Warning: non-existent sub-project "asnval"'
Warning: non-existent sub-project "asnval"
/bin/echo 'Warning: non-existent sub-project "asn_cleanup"'
Warning: non-existent sub-project "asn_cleanup"
/bin/echo 'Warning: non-existent sub-project "id1_fetch"'
Warning: non-existent sub-project "id1_fetch"
/usr/bin/make -C blast -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
SKIP -- app/blast/blastp
SKIP -- app/blast/blastn
SKIP -- app/blast/blastx
SKIP -- app/blast/tblastn
SKIP -- app/blast/tblastx
SKIP -- app/blast/psiblast
SKIP -- app/blast/rpsblast
SKIP -- app/blast/rpstblastn
SKIP -- app/blast/blast_formatter
SKIP -- app/blast/deltablast
SKIP -- app/blast/seedtop
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/bin/echo 'Warning: non-existent sub-project "convert_seq"'
Warning: non-existent sub-project "convert_seq"
/bin/echo 'Warning: non-existent sub-project "nmer_repeats"'
Warning: non-existent sub-project "nmer_repeats"
/bin/echo 'Warning: non-existent sub-project "objmgr"'
Warning: non-existent sub-project "objmgr"
/bin/echo 'Warning: non-existent sub-project "gi2taxid"'
Warning: non-existent sub-project "gi2taxid"
/bin/echo 'Warning: non-existent sub-project "netschedule"'
Warning: non-existent sub-project "netschedule"
/bin/echo 'Warning: non-existent sub-project "grid"'
Warning: non-existent sub-project "grid"
/bin/echo 'Warning: non-existent sub-project "netstorage"'
Warning: non-existent sub-project "netstorage"
/bin/echo 'Warning: non-existent sub-project "igblast"'
Warning: non-existent sub-project "igblast"
/usr/bin/make -C winmasker -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
SKIP -- app/winmasker/winmasker
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/usr/bin/make -C dustmasker -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
SKIP -- app/dustmasker/dustmasker
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
/usr/bin/make -C segmasker -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
SKIP -- app/segmasker/segmasker
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
/usr/bin/make -C blastdb -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
SKIP -- app/blastdb/blastdbcmd
SKIP -- app/blastdb/makeblastdb
SKIP -- app/blastdb/blastdb_aliastool
SKIP -- app/blastdb/blastdbcheck
SKIP -- app/blastdb/convert2blastmask
SKIP -- app/blastdb/blastdbcp
SKIP -- app/blastdb/makeprofiledb
make[6]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/bin/echo 'Warning: non-existent sub-project "vecscreen"'
Warning: non-existent sub-project "vecscreen"
/bin/echo 'Warning: non-existent sub-project "agpconvert"'
Warning: non-existent sub-project "agpconvert"
/bin/echo 'Warning: non-existent sub-project "id2_fetch"'
Warning: non-existent sub-project "id2_fetch"
/bin/echo 'Warning: non-existent sub-project "agp_validate"'
Warning: non-existent sub-project "agp_validate"
/bin/echo 'Warning: non-existent sub-project "objextract"'
Warning: non-existent sub-project "objextract"
/bin/echo 'Warning: non-existent sub-project "bdb_env_keeper"'
Warning: non-existent sub-project "bdb_env_keeper"
/bin/echo 'Warning: non-existent sub-project "nw_aligner"'
Warning: non-existent sub-project "nw_aligner"
/bin/echo 'Warning: non-existent sub-project "speedtest"'
Warning: non-existent sub-project "speedtest"
/bin/echo 'Warning: non-existent sub-project "idmapper"'
Warning: non-existent sub-project "idmapper"
/bin/echo 'Warning: non-existent sub-project "formatguess"'
Warning: non-existent sub-project "formatguess"
/bin/echo 'Warning: non-existent sub-project "multireader"'
Warning: non-existent sub-project "multireader"
/bin/echo 'Warning: non-existent sub-project "read_blast_result"'
Warning: non-existent sub-project "read_blast_result"
/bin/echo 'Warning: non-existent sub-project "splign"'
Warning: non-existent sub-project "splign"
/bin/echo 'Warning: non-existent sub-project "hfilter"'
Warning: non-existent sub-project "hfilter"
/bin/echo 'Warning: non-existent sub-project "annotwriter"'
Warning: non-existent sub-project "annotwriter"
/bin/echo 'Warning: non-existent sub-project "compart"'
Warning: non-existent sub-project "compart"
/bin/echo 'Warning: non-existent sub-project "streamtest"'
Warning: non-existent sub-project "streamtest"
/bin/echo 'Warning: non-existent sub-project "lds2_indexer"'
Warning: non-existent sub-project "lds2_indexer"
/bin/echo 'Warning: non-existent sub-project "discrepancy_report"'
Warning: non-existent sub-project "discrepancy_report"
/bin/echo 'Warning: non-existent sub-project "biosample_chk"'
Warning: non-existent sub-project "biosample_chk"
/bin/echo 'Warning: non-existent sub-project "gap_stats"'
Warning: non-existent sub-project "gap_stats"
/bin/echo 'Warning: non-existent sub-project "table2asn"'
Warning: non-existent sub-project "table2asn"
/bin/echo 'Warning: non-existent sub-project "srcchk"'
Warning: non-existent sub-project "srcchk"
/bin/echo 'Warning: non-existent sub-project "tableval"'
Warning: non-existent sub-project "tableval"
/bin/echo 'Warning: non-existent sub-project "ncbi_encrypt"'
Warning: non-existent sub-project "ncbi_encrypt"
/bin/echo 'Warning: non-existent sub-project "ssub_fork"'
Warning: non-existent sub-project "ssub_fork"
/bin/echo 'Warning: non-existent sub-project "asn_cache"'
Warning: non-existent sub-project "asn_cache"
/bin/echo 'Warning: non-existent sub-project "magicblast"'
Warning: non-existent sub-project "magicblast"
/bin/echo 'Warning: non-existent sub-project "pub_report"'
Warning: non-existent sub-project "pub_report"
/bin/echo 'Warning: non-existent sub-project "prot_match"'
Warning: non-existent sub-project "prot_match"
/bin/echo 'Warning: non-existent sub-project "gff_deconcat"'
Warning: non-existent sub-project "gff_deconcat"
/bin/echo 'Warning: non-existent sub-project "sub_fuse"'
Warning: non-existent sub-project "sub_fuse"
/bin/echo 'Warning: non-existent sub-project "split_cache"'
Warning: non-existent sub-project "split_cache"
/bin/echo 'Warning: non-existent sub-project "wig2table"'
Warning: non-existent sub-project "wig2table"
/bin/echo 'Warning: non-existent sub-project "netcache"'
Warning: non-existent sub-project "netcache"
/bin/echo 'Warning: non-existent sub-project "rmblastn"'
Warning: non-existent sub-project "rmblastn"
/bin/echo 'Warning: non-existent sub-project "dblb"'
Warning: non-existent sub-project "dblb"
/bin/echo 'Warning: non-existent sub-project "tls"'
Warning: non-existent sub-project "tls"
/bin/echo 'Warning: non-existent sub-project "idfetch"'
Warning: non-existent sub-project "idfetch"
make[5]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/app'
/bin/echo 'Warning: non-existent sub-project "sample"'
Warning: non-existent sub-project "sample"
/bin/echo 'Warning: non-existent sub-project "internal"'
Warning: non-existent sub-project "internal"
make[4]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build'
----------------------------------------------------------------------
Building check script...
SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES)
SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES)
SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES)
SKIP -- objtools/blast/seqdb_writer/unit_test/writedb_unit_test (unmet CHECK_REQUIRES)
SKIP -- objtools/blast/blastdb_format/unit_test/blastdb_format_unit_test (unmet CHECK_REQUIRES)
SKIP -- objtools/align_format/unit_test/align_format_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/blastinput/unit_test/blastinput_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/blast_format/blast_format_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/blastdb/bdbloader_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/seqdb_reader/seqdb_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blast_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/aalookup_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/seqsrc_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/delta_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/ntlookup_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/seqinfosrc_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/setupfactory_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/search_strategy_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/redoalignment_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/queryinfo_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/querydata_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/pssmenginefreqratios_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastsetup_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastextend_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/pssmcreate_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/psiblast_iteration_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/hspfilter_besthit_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/hspfilter_culling_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/optionshandle_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/msa2pssm_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/tracebacksearch_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/traceback_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/psibl2seq_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/psiblast_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/prelimsearch_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/phiblast_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/split_query_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/scoreblk_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/hspstream_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/rps_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/gapinfo_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blasthits_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/linkhsp_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastengine_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/subj_ranges_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/version_reference_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/ntscan_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/remote_blast_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/uniform_search_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastfilter_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastoptions_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/gencode_singleton_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/bl2seq_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/stat_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/magicblast_unit_test (unmet CHECK_REQUIRES)
Done.
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/check.sh: 272: ulimit: error setting limit (Operation not permitted)
OK -- [serial/datatool] datatool.sh (real 2.27, user 1.11, sys 0.68)
SKP -- [serial/datatool] datatool_xml.sh
ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM
ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM_BY_SEQ
ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_TYPELOC
OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.23, user 0.07, sys 0.08)
ERR [201] -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 69.18, user 46.93, sys 12.14)
OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.23, user 0.07, sys 0.06)
ERR [201] -- [algo/blast/unit_tests/api] aascan_unit_test (real 33.74, user 0.42, sys 0.23)
Succeeded : 3
Timeout : 0
Failed : 2
Absent : 4
make[3]: *** [/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.meta_r:46: check_r.real] Error 7
make[3]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build'
make[2]: *** [Makefile:33: check] Error 2
make[2]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++'
dh_auto_test: cd c\+\+ && /usr/bin/make V=1 -j1 check VERBOSE=1 returned exit code 2
make[1]: [debian/rules:64: override_dh_auto_test] Error 2 (ignored)
c++/BUILD/build/check.sh concat_err
cat c++/BUILD/build/check.sh.out_err
ERR [201] -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 69.18, user 46.93, sys 12.14)
ERR [201] -- [algo/blast/unit_tests/api] aascan_unit_test (real 33.74, user 0.42, sys 0.23)
======================================================================
proteinkmer_unit_test
======================================================================
06870/000/0000/PB C7AA1AD6C1717121 0001/0001 2018-12-17T03:25:06.961823 bm-wb-04 UNK_CLIENT UNK_SESSION proteinkmer_unit_test start /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test
Running 31 test cases...
06870/000/0000/PE C7AA1AD6C1717121 0002/0002 2018-12-17T03:25:07.044348 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
06870/000/0000/PE C7AA1AD6C1717121 0003/0003 2018-12-17T03:25:07.044715 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
06870/000/0000/PE C7AA1AD6C1717121 0004/0004 2018-12-17T03:25:07.045068 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
06870/000/0000/PE C7AA1AD6C1717121 0006/0006 2018-12-17T03:25:07.056592 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
06870/000/0000/PE C7AA1AD6C1717121 0007/0007 2018-12-17T03:25:07.056860 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
06870/000/0000/PE C7AA1AD6C1717121 0008/0008 2018-12-17T03:25:07.057054 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
06870/000/0000/PE C7AA1AD6C1717121 0010/0010 2018-12-17T03:25:08.060394 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
06870/000/0000/PE C7AA1AD6C1717121 0011/0011 2018-12-17T03:25:08.060687 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
06870/000/0000/PE C7AA1AD6C1717121 0012/0012 2018-12-17T03:25:08.061123 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
06870/000/0000/PE C7AA1AD6C1717121 0014/0014 2018-12-17T03:25:10.564668 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
06870/000/0000/PE C7AA1AD6C1717121 0015/0015 2018-12-17T03:25:10.564956 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
06870/000/0000/PE C7AA1AD6C1717121 0016/0016 2018-12-17T03:25:10.565155 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
06870/000/0000/PE C7AA1AD6C1717121 0018/0018 2018-12-17T03:25:15.318738 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
06870/000/0000/PE C7AA1AD6C1717121 0019/0019 2018-12-17T03:25:15.319042 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
06870/000/0000/PE C7AA1AD6C1717121 0020/0020 2018-12-17T03:25:15.319242 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
06870/000/0000/PE C7AA1AD6C1717121 0022/0022 2018-12-17T03:25:15.321121 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: ID2(CLoaderException::eConnectionFailed) "reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2
06870/000/0000/PE C7AA1AD6C1717121 0023/0023 2018-12-17T03:25:15.321352 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: GENBANK(CLoaderException::eNoConnection) "reader.cpp", line 187: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial connection
06870/000/0000/PE C7AA1AD6C1717121 0024/0024 2018-12-17T03:25:15.321520 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test Error: UNIT_TEST "proteinkmer_unit_test.cpp", line 83: proteinkmers::KmerResults_invoker() --- Uncaught exception in "KmerResults"(CLoaderException::eNoConnection) cannot open initial connection
unknown location(0): [4;31;49mfatal error: in "proteinkmers/KmerResults": uncaught exception, system error or abort requested[0;39;49m
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp(83): [1;36;49mlast checkpoint: "KmerResults" entry.[0;39;49m
lcl|3 Warning: WARNING: No KMERs in query
[1;31;49m*** 1 failure is detected in the test module "Master Test Suite"
[0;39;49mExecuted 31 test cases.
[1;31;49m*** 1 failure is detected in the test module "Master Test Suite"
[0;39;49m06870/000/0000/PE C7AA1AD6C1717121 0025/0025 2018-12-17T03:26:14.936201 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test extra ncbi_phid=C7AA1AD6C17171210000000000000001
06870/000/0000/PE C7AA1AD6C1717121 0026/0026 2018-12-17T03:26:14.936477 bm-wb-04 UNK_CLIENT C7AA1AD6C1717131_0000SID proteinkmer_unit_test stop 201 68.017898797
Command exited with non-zero status 201
real 69.18
user 46.93
sys 12.14
Start time : 12/17/2018 03:25:05
Stop time : 12/17/2018 03:26:14
Load averages: 1.93 2.59 4.10
@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
@@@ EXIT CODE: 201
======================================================================
aascan_unit_test
======================================================================
07038/000/0000/PB C7AA1B7EC1717581 0001/0001 2018-12-17T03:26:16.249353 bm-wb-04 UNK_CLIENT UNK_SESSION aascan_unit_test start /build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test
Running 4 test cases...
07038/000/0000/PE C7AA1B7EC1717581 0002/0002 2018-12-17T03:26:16.283114 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0003/0003 2018-12-17T03:26:16.283475 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0004/0004 2018-12-17T03:26:16.283676 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0006/0006 2018-12-17T03:26:16.287255 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0007/0007 2018-12-17T03:26:16.287501 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0008/0008 2018-12-17T03:26:16.287690 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0010/0010 2018-12-17T03:26:17.291000 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0011/0011 2018-12-17T03:26:17.291270 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0012/0012 2018-12-17T03:26:17.291465 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0014/0014 2018-12-17T03:26:19.794852 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0015/0015 2018-12-17T03:26:19.795126 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0016/0016 2018-12-17T03:26:19.795324 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0018/0018 2018-12-17T03:26:24.549144 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0019/0019 2018-12-17T03:26:24.549477 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0020/0020 2018-12-17T03:26:24.549682 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
unknown location(0): [4;31;49mfatal error: in "aascan/ScanOffsetTest": ncbi::objects::CLoaderException: NCBI C++ Exception:
Error: ID2(CLoaderException::eConnectionFailed) "/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2
Error: GENBANK(CLoaderException::eNoConnection) "/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp", line 187: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial connection
[0;39;49m
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp(251): [1;36;49mlast checkpoint: "ScanOffsetTest" fixture entry.[0;39;49m
07038/000/0000/PE C7AA1B7EC1717581 0024/0024 2018-12-17T03:26:24.557009 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0025/0025 2018-12-17T03:26:24.557281 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0026/0026 2018-12-17T03:26:24.557480 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0028/0028 2018-12-17T03:26:24.560507 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0029/0029 2018-12-17T03:26:24.560744 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0030/0030 2018-12-17T03:26:24.560983 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0032/0032 2018-12-17T03:26:25.572361 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0033/0033 2018-12-17T03:26:25.572626 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0034/0034 2018-12-17T03:26:25.572878 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0036/0036 2018-12-17T03:26:28.076464 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0037/0037 2018-12-17T03:26:28.076764 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0038/0038 2018-12-17T03:26:28.076968 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0040/0040 2018-12-17T03:26:32.830414 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0041/0041 2018-12-17T03:26:32.830716 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0042/0042 2018-12-17T03:26:32.830989 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
unknown location(0): [4;31;49mfatal error: in "aascan/ScanMaxHitsTest": ncbi::objects::CLoaderException: NCBI C++ Exception:
Error: ID2(CLoaderException::eConnectionFailed) "/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2
Error: GENBANK(CLoaderException::eNoConnection) "/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp", line 187: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial connection
[0;39;49m
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp(331): [1;36;49mlast checkpoint: "ScanMaxHitsTest" fixture entry.[0;39;49m
07038/000/0000/PE C7AA1B7EC1717581 0046/0046 2018-12-17T03:26:32.837754 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0047/0047 2018-12-17T03:26:32.838020 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0048/0048 2018-12-17T03:26:32.838226 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0050/0050 2018-12-17T03:26:32.841382 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0051/0051 2018-12-17T03:26:32.841652 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0052/0052 2018-12-17T03:26:32.841848 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0054/0054 2018-12-17T03:26:33.845111 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0055/0055 2018-12-17T03:26:33.845376 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0056/0056 2018-12-17T03:26:33.845574 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0058/0058 2018-12-17T03:26:36.367600 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0059/0059 2018-12-17T03:26:36.367905 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0060/0060 2018-12-17T03:26:36.368112 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0062/0062 2018-12-17T03:26:41.123676 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0063/0063 2018-12-17T03:26:41.123988 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0064/0064 2018-12-17T03:26:41.124198 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
unknown location(0): [4;31;49mfatal error: in "aascan/SkipMaskedRanges": ncbi::objects::CLoaderException: NCBI C++ Exception:
Error: ID2(CLoaderException::eConnectionFailed) "/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2
Error: GENBANK(CLoaderException::eNoConnection) "/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp", line 187: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial connection
[0;39;49m
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp(384): [1;36;49mlast checkpoint: "SkipMaskedRanges" fixture entry.[0;39;49m
07038/000/0000/PE C7AA1B7EC1717581 0068/0068 2018-12-17T03:26:41.131113 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0069/0069 2018-12-17T03:26:41.131390 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0070/0070 2018-12-17T03:26:41.131592 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0072/0072 2018-12-17T03:26:41.134649 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0073/0073 2018-12-17T03:26:41.134887 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0074/0074 2018-12-17T03:26:41.135082 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0076/0076 2018-12-17T03:26:42.138330 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0077/0077 2018-12-17T03:26:42.138596 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0078/0078 2018-12-17T03:26:42.138790 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0080/0080 2018-12-17T03:26:44.642076 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0081/0081 2018-12-17T03:26:44.642342 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0082/0082 2018-12-17T03:26:44.642545 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
07038/000/0000/PE C7AA1B7EC1717581 0084/0084 2018-12-17T03:26:49.396073 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=bm-wb-04(127.0.0.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Not supported
07038/000/0000/PE C7AA1B7EC1717581 0085/0085 2018-12-17T03:26:49.396367 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found
07038/000/0000/PE C7AA1B7EC1717581 0086/0086 2018-12-17T03:26:49.396574 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown
unknown location(0): [4;31;49mfatal error: in "aascan/ScanCheckScores": ncbi::objects::CLoaderException: NCBI C++ Exception:
Error: ID2(CLoaderException::eConnectionFailed) "/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2
Error: GENBANK(CLoaderException::eNoConnection) "/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp", line 187: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial connection
[0;39;49m
/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp(434): [1;36;49mlast checkpoint: "ScanCheckScores" fixture entry.[0;39;49m
[1;31;49m*** 4 failures are detected in the test module "Master Test Suite"
[0;39;49mExecuted 4 test cases.
[1;31;49m*** 4 failures are detected in the test module "Master Test Suite"
[0;39;49m07038/000/0000/PE C7AA1B7EC1717581 0090/0090 2018-12-17T03:26:49.406116 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test extra ncbi_phid=C7AA1B7EC17175810000000000000001
07038/000/0000/PE C7AA1B7EC1717581 0091/0091 2018-12-17T03:26:49.406371 bm-wb-04 UNK_CLIENT C7AA1B7EC1717581_0000SID aascan_unit_test stop 201 33.180902957
Command exited with non-zero status 201
real 33.74
user 0.42
sys 0.23
Start time : 12/17/2018 03:26:15
Stop time : 12/17/2018 03:26:49
Load averages: 1.22 2.34 3.96
@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
@@@ EXIT CODE: 201
make[1]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1'
fakeroot debian/rules binary-arch
#dh binary-arch -Dc++ --with autotools_dev
dh binary-arch -Dc++
dh_testroot -a -O-Dc\+\+
dh_prep -a -O-Dc\+\+
dh_installdirs -a -O-Dc\+\+
debian/rules override_dh_auto_install-arch
make[1]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1'
# cp c++/BUILD/lib/*.so debian/ncbi-blast+/usr/lib/ncbi-blast+/
cp c++/BUILD/bin/* debian/ncbi-blast+/usr/bin/
make[1]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1'
debian/rules override_dh_install-arch
make[1]: Entering directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1'
# dh_install
mv debian/ncbi-blast+/usr/bin/rpsblast debian/ncbi-blast+/usr/bin/rpsblast+
mv debian/ncbi-blast+/usr/bin/seedtop debian/ncbi-blast+/usr/bin/seedtop+
mv debian/ncbi-blast+/usr/bin/legacy_blast.pl debian/ncbi-blast+/usr/bin/legacy_blast
mv debian/ncbi-blast+/usr/bin/update_blastdb.pl debian/ncbi-blast+/usr/bin/update_blastdb
mv debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter.py \
debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter
rm -f debian/ncbi-blast+/usr/bin/*test* debian/ncbi-blast+/usr/bin/seqdb_demo \
debian/ncbi-blast+/usr/bin/datatool debian/ncbi-blast+/usr/bin/run_with_lock \
debian/ncbi-blast+/usr/bin/project_tree_builder
for x in debian/ncbi-blast+/usr/bin/*; do \
LD_LIBRARY_PATH=c++/BUILD/lib ldd $x; \
done 2>/dev/null | awk '/BUILD/ { print $3 }' | sort -u | \
xargs cp -v -t debian/ncbi-blast+/usr/lib/ncbi-blast+
'c++/BUILD/lib/libalign_format.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libalign_format.so'
'c++/BUILD/lib/libbiblio.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libbiblio.so'
'c++/BUILD/lib/libblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblast.so'
'c++/BUILD/lib/libblast_services.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblast_services.so'
'c++/BUILD/lib/libblastdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastdb.so'
'c++/BUILD/lib/libblastdb_format.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastdb_format.so'
'c++/BUILD/lib/libblastinput.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastinput.so'
'c++/BUILD/lib/libblastxml.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastxml.so'
'c++/BUILD/lib/libblastxml2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastxml2.so'
'c++/BUILD/lib/libcomposition_adjustment.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libcomposition_adjustment.so'
'c++/BUILD/lib/libcreaders.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libcreaders.so'
'c++/BUILD/lib/libgbseq.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgbseq.so'
'c++/BUILD/lib/libgene_info.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgene_info.so'
'c++/BUILD/lib/libgeneral.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgeneral.so'
'c++/BUILD/lib/libgenome_collection.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgenome_collection.so'
'c++/BUILD/lib/libid1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libid1.so'
'c++/BUILD/lib/libid2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libid2.so'
'c++/BUILD/lib/libmedlars.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmedlars.so'
'c++/BUILD/lib/libmedline.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmedline.so'
'c++/BUILD/lib/libmla.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmla.so'
'c++/BUILD/lib/libmlacli.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmlacli.so'
'c++/BUILD/lib/libncbi_xloader_blastdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_blastdb.so'
'c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_blastdb_rmt.so'
'c++/BUILD/lib/libncbi_xloader_genbank.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_genbank.so'
'c++/BUILD/lib/libncbi_xreader.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader.so'
'c++/BUILD/lib/libncbi_xreader_cache.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_cache.so'
'c++/BUILD/lib/libncbi_xreader_id1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_id1.so'
'c++/BUILD/lib/libncbi_xreader_id2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_id2.so'
'c++/BUILD/lib/libpub.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libpub.so'
'c++/BUILD/lib/libpubmed.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libpubmed.so'
'c++/BUILD/lib/libscoremat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libscoremat.so'
'c++/BUILD/lib/libseq.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseq.so'
'c++/BUILD/lib/libseqcode.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqcode.so'
'c++/BUILD/lib/libseqdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqdb.so'
'c++/BUILD/lib/libseqedit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqedit.so'
'c++/BUILD/lib/libseqmasks_io.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqmasks_io.so'
'c++/BUILD/lib/libseqset.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqset.so'
'c++/BUILD/lib/libseqsplit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqsplit.so'
'c++/BUILD/lib/libsequtil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libsequtil.so'
'c++/BUILD/lib/libsubmit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libsubmit.so'
'c++/BUILD/lib/libtables.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtables.so'
'c++/BUILD/lib/libtaxon1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtaxon1.so'
'c++/BUILD/lib/libtaxon3.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtaxon3.so'
'c++/BUILD/lib/libvalid.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libvalid.so'
'c++/BUILD/lib/libwritedb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libwritedb.so'
'c++/BUILD/lib/libxalgoblastdbindex.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgoblastdbindex.so'
'c++/BUILD/lib/libxalgodustmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgodustmask.so'
'c++/BUILD/lib/libxalgosegmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgosegmask.so'
'c++/BUILD/lib/libxalgowinmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgowinmask.so'
'c++/BUILD/lib/libxalnmgr.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalnmgr.so'
'c++/BUILD/lib/libxblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxblast.so'
'c++/BUILD/lib/libxblastformat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxblastformat.so'
'c++/BUILD/lib/libxcgi.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcgi.so'
'c++/BUILD/lib/libxcleanup.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcleanup.so'
'c++/BUILD/lib/libxcompress.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcompress.so'
'c++/BUILD/lib/libxconnect.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxconnect.so'
'c++/BUILD/lib/libxformat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxformat.so'
'c++/BUILD/lib/libxhtml.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxhtml.so'
'c++/BUILD/lib/libxncbi.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxncbi.so'
'c++/BUILD/lib/libxnetblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxnetblast.so'
'c++/BUILD/lib/libxnetblastcli.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxnetblastcli.so'
'c++/BUILD/lib/libxobjmgr.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjmgr.so'
'c++/BUILD/lib/libxobjread.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjread.so'
'c++/BUILD/lib/libxobjutil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjutil.so'
'c++/BUILD/lib/libxregexp.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxregexp.so'
'c++/BUILD/lib/libxser.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxser.so'
'c++/BUILD/lib/libxutil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxutil.so'
make[1]: Leaving directory '/build/ncbi-blast+-v4XaBb/ncbi-blast+-2.7.1'
dh_installdocs -a -O-Dc\+\+
dh_installchangelogs -a -O-Dc\+\+
dh_installexamples -a -O-Dc\+\+
dh_installman -a -O-Dc\+\+
dh_installcatalogs -a -O-Dc\+\+
dh_installcron -a -O-Dc\+\+
dh_installdebconf -a -O-Dc\+\+
dh_installemacsen -a -O-Dc\+\+
dh_installifupdown -a -O-Dc\+\+
dh_installinfo -a -O-Dc\+\+
dh_installinit -a -O-Dc\+\+
dh_installmenu -a -O-Dc\+\+
dh_installmime -a -O-Dc\+\+
dh_installmodules -a -O-Dc\+\+
dh_installlogcheck -a -O-Dc\+\+
dh_installlogrotate -a -O-Dc\+\+
dh_installpam -a -O-Dc\+\+
dh_installppp -a -O-Dc\+\+
dh_installudev -a -O-Dc\+\+
dh_installgsettings -a -O-Dc\+\+
dh_bugfiles -a -O-Dc\+\+
dh_ucf -a -O-Dc\+\+
dh_lintian -a -O-Dc\+\+
dh_gconf -a -O-Dc\+\+
dh_gconf: Please migrate to dh_installgsettings; gconf + dh_gconf is scheduled for removal.
dh_icons -a -O-Dc\+\+
dh_perl -a -O-Dc\+\+
dh_usrlocal -a -O-Dc\+\+
dh_link -a -O-Dc\+\+
dh_installwm -a -O-Dc\+\+
dh_installxfonts -a -O-Dc\+\+
dh_strip_nondeterminism -a -O-Dc\+\+
dh_compress -a -O-Dc\+\+
dh_fixperms -a -O-Dc\+\+
dh_missing -a -O-Dc\+\+
dh_strip -a -O-Dc\+\+
dh_makeshlibs -a -O-Dc\+\+
dh_shlibdeps -a -O-Dc\+\+
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/rpstblastn contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/makeprofiledb contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/seedtop+ contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastn contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastx contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdbcheck contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/makembindex contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdbcp contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/deltablast contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/rpsblast+ contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/makeblastdb contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/gene_info_reader contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/windowmasker contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/convert2blastmask contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/dustmasker contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdbcmd contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/psiblast contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdb_aliastool contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/tblastx contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/segmasker contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastp contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/seqdb_perf contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blast_formatter contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/tblastn contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dh_installdeb -a -O-Dc\+\+
dh_gencontrol -a -O-Dc\+\+
dh_md5sums -a -O-Dc\+\+
dh_builddeb -a -O-Dc\+\+
dpkg-deb: building package 'ncbi-blast+-dbgsym' in '../ncbi-blast+-dbgsym_2.7.1-2_armhf.deb'.
dpkg-deb: building package 'ncbi-blast+' in '../ncbi-blast+_2.7.1-2_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../ncbi-blast+_2.7.1-2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-12-17T03:40:10Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
ncbi-blast+_2.7.1-2_armhf.changes:
----------------------------------
Format: 1.8
Date: Wed, 12 Dec 2018 22:24:45 -0500
Source: ncbi-blast+
Binary: ncbi-blast+ ncbi-blast+-legacy blast2
Architecture: armhf
Version: 2.7.1-2
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Aaron M. Ucko <ucko@debian.org>
Description:
blast2 - transitional dummy package to ncbi-blast+-legacy
ncbi-blast+ - next generation suite of BLAST sequence search tools
ncbi-blast+-legacy - NCBI Blast legacy call script
Closes: 916000
Changes:
ncbi-blast+ (2.7.1-2) unstable; urgency=medium
.
[ David Miguel Susano Pinto ]
* d/control: fix Vcs-* links to point to salsa
.
[ Aaron M. Ucko ]
* d/control: Standards-Version: 4.2.1 (already compliant).
* d/patches/support_boost_1_67: New patch to extend Boost support
(used for uninstalled tests) through at least version 1.67, per
upstream (https://www.ncbi.nlm.nih.gov/viewvc/v1/trunk/c%2B%2B)
revisions 79910, 79926, 79928, and 79929. (Closes: #916000.)
Checksums-Sha1:
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9f0e003f49b45d50dd0bc50dd75aab931180991b 5679 ncbi-blast+_2.7.1-2_armhf.buildinfo
18c74df1ca5946e7aa2c8d859eeba54b8f2c2344 8218284 ncbi-blast+_2.7.1-2_armhf.deb
Checksums-Sha256:
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31883170de121dcbb9509d8c9c85bdc0200cda65612eccc2d2ad01bbc6db718c 5679 ncbi-blast+_2.7.1-2_armhf.buildinfo
8e3c1e67f44c4417aa344e36cb502b64aa848567511d577bcf594590bf2022c3 8218284 ncbi-blast+_2.7.1-2_armhf.deb
Files:
04f32a0e8cb39f863c12523c202f60ec 215168640 debug optional ncbi-blast+-dbgsym_2.7.1-2_armhf.deb
2f948db5d3b7a735939a14fd605303ee 5679 science optional ncbi-blast+_2.7.1-2_armhf.buildinfo
c5842f3f3fd167c57a83888888292b13 8218284 science optional ncbi-blast+_2.7.1-2_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
ncbi-blast+-dbgsym_2.7.1-2_armhf.deb
------------------------------------
new Debian package, version 2.0.
size 215168640 bytes: control archive=4548 bytes.
4079 bytes, 12 lines control
9646 bytes, 91 lines md5sums
Package: ncbi-blast+-dbgsym
Source: ncbi-blast+
Version: 2.7.1-2
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 220992
Depends: ncbi-blast+ (= 2.7.1-2)
Section: debug
Priority: optional
Description: debug symbols for ncbi-blast+
Build-Ids: 0989deb87545da5dad6bb133f213ad3def0ed7db 0b27af32236bf2291cc621081329a2b87a3d0a75 0b3291d466a1a4ef6a158bbc38dd17520af78370 0b64ad9a3942b2c1f023b2739bdf4d499706b2ca 13790e2b1c4abf1df640e032f8a53cefaaa2a8c5 17d665419497fe187a8774dd76b64e8fbe7d3be8 1981de575c20d7fdeeafa1cd1ac174325656dbad 1be6cccf6f1224492a7c712b7874500bcf4c2ee9 1d4e77c2f69602395c800a4e7d57bdc0a8bf7653 1e911252085c750bbc27a32c0136936b6f0b40a6 1f59da11c9fc19f7154c33727787ddb72f3d0254 209fa093078968f8e6ba5d7f99d0fd197928127c 21a5d62ed4445af4e791a10597edf8bdf4ed7168 259dcff520445bb1c8be3cada79b28ac0938a23a 25fc027c4144c5db34e08e57f857b83d6ecd3559 29f4753c92adaa053481c1a82d6d4340e48230e4 2e90372dca0dc59e5d688f7420e27a497ab1f848 367d232a5af500b06ee69c555e309f62ae52f233 36d655121c2a32fb8449f68b9d3cab2a684153ff 389ac61e5e296d17a59d02ea64ea736f8794c163 38bd01991d3fd47102c9e79460cc906b91395de5 3ac98e4eacb88c2ee30efc83eaa2bc46e628bac5 3c53f9da0a2357b0754ffb76953d3adb0628bc61 3d8c2e72bb65a9efe4a7db879db3bd0b62929e91 3e1b18b8d77cd9aa2beb2bca70f5364e0ce29320 41e00ee9eeea1124d98fa33372ad01a03b73ae2e 44c48cc4fb79ab3ae8bdfa6addd80ee1f49189f8 46bc5420b87c636f0f809d4baec9045ff98ec729 493f31f04d2a3d9a3fcc95614454cd433c82505d 53ee673b6e96cfd6300f3073087a18dc85b3f90f 55816a125146d77f62d79172548cd19632e15de7 5612c6be153502373f59ec8819b9e4fdf50e428b 58acb225d0f66b910ab801a6f890c25cecb121af 5a405377d588c8037616a3b796487a40c2747279 5ca6caae729ab4572edc8f9db067c91ad4ea894a 5ffa9285d3dbffc71218f376493963d5e80696fe 672e7d814e347908a6294ff57d3c41322fcfd5dc 6969a1a7b16df966e7bef5fe8080a0403a0b40c5 69a4f1b36a688134e5ccb13e519e263f364e2d9b 6ed1533bd6eccf29162e6d3b64a067f31424e2ea 7290fb84f5c4d2767ad296740b7759f8f5fc25e1 755f93ddec177682a5fdc7f470865e4cd1cb5722 75a60097358dde504bbc6293fd5293abe68369ec 79d544584eadf4e3e782fb62ec011ca0a4e4b467 7fb4553dd772e6da78d8022a9ce80e94ae8869c4 83aac064264f7d4b203a9bbf469e4c3bfa92e6e3 8772bc342e8fcfb7103bfa48054091250fc686a7 87a4d478d8d3a4057dbfe26e02edd0c93d5fb734 8b63d76bd8d823c7982842fb087fc82588c12c55 8e5971d311688729e087210d29c89f9d70d05493 8f31e5a83524d34d7e32d3643ef1da7f27e5dd52 90b3c76e26af9f0513d20700f633c23c59ba8759 94204298833359498a6d26f71371a7dec485b7f7 97244f4702799a44f4ef21326f0fea933b0f5758 9a59d579bd5dfaaf403eb3a2c085a89d34757e85 a28ee159cdae94d20f9ce21c201cf6878a3a686f a2cbca9ff6fc1e3f5cb52b50932cdcc21a3ffe40 a6f7cec758247463db88919e2945698b5cca30d9 a86164a83cf1dc06553505c7eea6fc8e11c961e0 a8e307a2030e16031c88e6aa5c4bf38d3ef594af ade08b38b8acf3ffc372f6e643b92b5b342d060f b1eb763e615214a0e036b93d9511b85fcb8cf21f b590e5db52d98c74c5b9f1d2276bc8a3f641aea1 bbe1601ad9055077c3e2fab2e85339f8b7c860e9 bf048a4ef0aa78d688ddd1921c4b5ad1c5c61d03 bf7d55295b079a955cee419c9360686194fcbbe5 c7d5b74457bd32239e596f1c4d71d0d4d661842c c8d8163887feac353be89bd7d7ac97918a9954b3 cab094deefea3630491125c147dbaffa6623e054 cb1819141680d3e46c3079aa4395087720d55f7e cb1c9e02d6e95f341bfe5b8fdda8389557c23bc4 cbd24a02a83f1de027136a04bfbdaddb7d153cd1 cf2a13a909b68d3615d1a994215c843ac2c8bd9a d06b60710a3479bc79d521f2b00cdd11d0435ed1 d2c6d4aed4a550591736557173c22ec7be16f37e d7d8189db2ae2668581e9088c7c4b6f2cf4a8558 ded3235d7d3cd5ad0c138f0619a63c0cbaffd342 e150aa42f890177ff9b4c4c383b3fb253032a8fe e19afb70fdfc194493a810ae4a490b06f95b6823 e3da90dc71483d4ce086c5b9b90892bcdafb1016 e5adb0ba9effa947ef1bb96d4310c771dc0c8716 eb75253815793c30e7638e70cee27215395c8cad ec5433db153a60e3f89a3cda35177a3a2ded8cd6 ed865bbc343e5ae0ec4a427925f8c0bbd338ed81 eff888be0b0ad5544072543027f3c8c33fa74f2c f4a7cec8e87b8c6f552e6fef0d4ae788486d58e8 f4b3eca14e6323a3144b46b391729d79d7c90178 f61a0ba46c159809887c9a708374eeddbfa553ec f7a3d9c8ffb509c7038bd3e4dad3ace98432722a f8a31b2cb386e900e8cd7e324333e6f31a0d87bd f9863a22be022710b4b44b9ff9a95dfba14813a0
drwxr-xr-x root/root 0 2018-12-13 03:24 ./
drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/
drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/lib/
drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/lib/debug/
drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/lib/debug/.build-id/09/
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ncbi-blast+_2.7.1-2_armhf.deb
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new Debian package, version 2.0.
size 8218284 bytes: control archive=3572 bytes.
1287 bytes, 24 lines control
6606 bytes, 100 lines md5sums
Package: ncbi-blast+
Version: 2.7.1-2
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 34483
Depends: ncbi-data, python, perl:any, libbz2-1.0, libc6 (>= 2.15), libgcc1 (>= 1:3.5), libgnutls30 (>= 3.5.6), libgomp1 (>= 4.9), libmbedcrypto3 (>= 2.13), libmbedtls12 (>= 2.13), libpcre3, libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.11.dfsg)
Enhances: t-coffee
Section: science
Priority: optional
Multi-Arch: foreign
Homepage: http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/
Description: next generation suite of BLAST sequence search tools
The Basic Local Alignment Search Tool (BLAST) is the most widely
used sequence similarity tool. There are versions of BLAST that
compare protein queries to protein databases, nucleotide queries
to nucleotide databases, as well as versions that translate nucleotide
queries or databases in all six frames and compare to protein databases
or queries.
PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting
with a protein query, and then uses that PSSM to perform further searches.
It is also possible to compare a protein or nucleotide query to a
database of PSSM’s.
The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as
a network service.
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Build Architecture: armhf
Build-Space: 3679276
Build-Time: 41558
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 460
Job: ncbi-blast+_2.7.1-2
Machine Architecture: armhf
Package: ncbi-blast+
Package-Time: 42087
Source-Version: 2.7.1-2
Space: 3679276
Status: successful
Version: 2.7.1-2
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Finished at 2018-12-17T03:40:10Z
Build needed 11:41:27, 3679276k disc space